Automated screening of computed tomography using weakly supervised anomaly detection
Background Current artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the former involves a heavy annotation workload owing to requiring many slice-wise annotations (ground truth labels); the latter is promising, bu...
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Published in | International journal for computer assisted radiology and surgery Vol. 18; no. 11; pp. 2001 - 2012 |
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Main Authors | , , , , |
Format | Journal Article |
Language | English |
Published |
Cham
Springer International Publishing
01.11.2023
Springer Nature B.V |
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Abstract | Background
Current artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the former involves a heavy annotation workload owing to requiring many slice-wise annotations (ground truth labels); the latter is promising, but while it reduces the annotation workload, it often suffers from lower performance. This study presents a novel weakly supervised anomaly detection (WSAD) algorithm trained based on scan-wise normal and anomalous annotations to provide better performance than conventional methods while reducing annotation workload
.
Methods
Based on surveillance video anomaly detection methodology, feature vectors representing each CT slice were trained on an AR-Net-based convolutional network using a dynamic multiple-instance learning loss and a center loss function. The following two publicly available CT datasets were retrospectively analyzed: the RSNA brain hemorrhage dataset (normal scans: 12,862; scans with intracranial hematoma: 8882) and COVID-CT set (normal scans: 282; scans with COVID-19: 95).
Results
Anomaly scores of each slice were successfully predicted despite inaccessibility to any slice-wise annotations. Slice-level area under the curve (AUC), sensitivity, specificity, and accuracy from the brain CT dataset were 0.89, 0.85, 0.78, and 0.79, respectively. The proposed method reduced the number of annotations in the brain dataset by 97.1% compared to an ordinary slice-level supervised learning method.
Conclusion
This study demonstrated a significant annotation reduction in identifying anomalous CT slices compared to a supervised learning approach. The effectiveness of the proposed WSAD algorithm was verified through higher AUC than existing anomaly detection techniques. |
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AbstractList | Background
Current artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the former involves a heavy annotation workload owing to requiring many slice-wise annotations (ground truth labels); the latter is promising, but while it reduces the annotation workload, it often suffers from lower performance. This study presents a novel weakly supervised anomaly detection (WSAD) algorithm trained based on scan-wise normal and anomalous annotations to provide better performance than conventional methods while reducing annotation workload
.
Methods
Based on surveillance video anomaly detection methodology, feature vectors representing each CT slice were trained on an AR-Net-based convolutional network using a dynamic multiple-instance learning loss and a center loss function. The following two publicly available CT datasets were retrospectively analyzed: the RSNA brain hemorrhage dataset (normal scans: 12,862; scans with intracranial hematoma: 8882) and COVID-CT set (normal scans: 282; scans with COVID-19: 95).
Results
Anomaly scores of each slice were successfully predicted despite inaccessibility to any slice-wise annotations. Slice-level area under the curve (AUC), sensitivity, specificity, and accuracy from the brain CT dataset were 0.89, 0.85, 0.78, and 0.79, respectively. The proposed method reduced the number of annotations in the brain dataset by 97.1% compared to an ordinary slice-level supervised learning method.
Conclusion
This study demonstrated a significant annotation reduction in identifying anomalous CT slices compared to a supervised learning approach. The effectiveness of the proposed WSAD algorithm was verified through higher AUC than existing anomaly detection techniques. BACKGROUNDCurrent artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the former involves a heavy annotation workload owing to requiring many slice-wise annotations (ground truth labels); the latter is promising, but while it reduces the annotation workload, it often suffers from lower performance. This study presents a novel weakly supervised anomaly detection (WSAD) algorithm trained based on scan-wise normal and anomalous annotations to provide better performance than conventional methods while reducing annotation workload. METHODSBased on surveillance video anomaly detection methodology, feature vectors representing each CT slice were trained on an AR-Net-based convolutional network using a dynamic multiple-instance learning loss and a center loss function. The following two publicly available CT datasets were retrospectively analyzed: the RSNA brain hemorrhage dataset (normal scans: 12,862; scans with intracranial hematoma: 8882) and COVID-CT set (normal scans: 282; scans with COVID-19: 95). RESULTSAnomaly scores of each slice were successfully predicted despite inaccessibility to any slice-wise annotations. Slice-level area under the curve (AUC), sensitivity, specificity, and accuracy from the brain CT dataset were 0.89, 0.85, 0.78, and 0.79, respectively. The proposed method reduced the number of annotations in the brain dataset by 97.1% compared to an ordinary slice-level supervised learning method. CONCLUSIONThis study demonstrated a significant annotation reduction in identifying anomalous CT slices compared to a supervised learning approach. The effectiveness of the proposed WSAD algorithm was verified through higher AUC than existing anomaly detection techniques. Current artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the former involves a heavy annotation workload owing to requiring many slice-wise annotations (ground truth labels); the latter is promising, but while it reduces the annotation workload, it often suffers from lower performance. This study presents a novel weakly supervised anomaly detection (WSAD) algorithm trained based on scan-wise normal and anomalous annotations to provide better performance than conventional methods while reducing annotation workload. Based on surveillance video anomaly detection methodology, feature vectors representing each CT slice were trained on an AR-Net-based convolutional network using a dynamic multiple-instance learning loss and a center loss function. The following two publicly available CT datasets were retrospectively analyzed: the RSNA brain hemorrhage dataset (normal scans: 12,862; scans with intracranial hematoma: 8882) and COVID-CT set (normal scans: 282; scans with COVID-19: 95). Anomaly scores of each slice were successfully predicted despite inaccessibility to any slice-wise annotations. Slice-level area under the curve (AUC), sensitivity, specificity, and accuracy from the brain CT dataset were 0.89, 0.85, 0.78, and 0.79, respectively. The proposed method reduced the number of annotations in the brain dataset by 97.1% compared to an ordinary slice-level supervised learning method. This study demonstrated a significant annotation reduction in identifying anomalous CT slices compared to a supervised learning approach. The effectiveness of the proposed WSAD algorithm was verified through higher AUC than existing anomaly detection techniques. |
Author | Cusimano, Michael D. Tyrrell, Pascal N. Krishnan, Rahul G. Bilbily, Alexander Hibi, Atsuhiro |
Author_xml | – sequence: 1 givenname: Atsuhiro surname: Hibi fullname: Hibi, Atsuhiro organization: Institute of Medical Science, University of Toronto, Department of Medical Imaging, University of Toronto – sequence: 2 givenname: Michael D. surname: Cusimano fullname: Cusimano, Michael D. organization: Division of Neurosurgery, St Michael’s Hospital, University of Toronto – sequence: 3 givenname: Alexander surname: Bilbily fullname: Bilbily, Alexander organization: Department of Medical Imaging, University of Toronto, Sunnybrook Health Sciences Centre – sequence: 4 givenname: Rahul G. surname: Krishnan fullname: Krishnan, Rahul G. organization: Department of Computer Science, University of Toronto, Department of Laboratory Medicine and Pathobiology, University of Toronto – sequence: 5 givenname: Pascal N. orcidid: 0000-0003-2277-3824 surname: Tyrrell fullname: Tyrrell, Pascal N. email: pascal.tyrrell@utoronto.ca organization: Institute of Medical Science, University of Toronto, Department of Medical Imaging, University of Toronto, Department of Statistical Sciences, University of Toronto |
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Keywords | COVID-19 Traumatic brain injury Computed tomography Artificial intelligence Anomaly detection Machine learning |
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Current artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the... Current artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the former... BackgroundCurrent artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the... BACKGROUNDCurrent artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the... |
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SubjectTerms | Algorithms Annotations Anomalies Artificial intelligence Brain Computed tomography Computer Imaging Computer Science Datasets Ground truth Health Informatics Hemorrhage Imaging Machine learning Medicine Medicine & Public Health Original Original Article Pattern Recognition and Graphics Radiology Screening Supervised learning Surgery Vision Workload Workloads |
Title | Automated screening of computed tomography using weakly supervised anomaly detection |
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