Detection of human bocavirus in nasopharyngeal aspirates versus in broncho-alveolar lavage fluids in children with lower respiratory tract infections
To compare the presence of human bocavirus (HBoV) in nasopharyngeal aspirates (NPA) versus broncho‐alveolar lavage fluids (BAL) in children with lower respiratory tract infections (LRTIs), as revealed by real‐time PCR, in order to confirm the diagnostic validity of NPA samples. A retrospective 5‐yea...
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Published in | Journal of medical virology Vol. 88; no. 2; pp. 211 - 215 |
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Main Authors | , , , , , , , , |
Format | Journal Article |
Language | English |
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Blackwell Publishing Ltd
01.02.2016
Wiley Subscription Services, Inc |
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Abstract | To compare the presence of human bocavirus (HBoV) in nasopharyngeal aspirates (NPA) versus broncho‐alveolar lavage fluids (BAL) in children with lower respiratory tract infections (LRTIs), as revealed by real‐time PCR, in order to confirm the diagnostic validity of NPA samples. A retrospective 5‐year study was performed from 2009 to 2014 in 1,194 patients under the age of 17 years (mean age of 3 years) that were diagnosed with LRTIs and from whom both NPA and BAL were obtained. Clinical and demographic data were recorded, and NPA and BAL samples were analyzed for HBoV‐positivity by real‐time PCR. Of the 1,194 patients enrolled, 65 (5.4%) patients had HBoV detected from NPA, and 61 (5.1%) had HBoV detected from BAL. For HBoV, there was a significant association between the NPA and BAL samples (P < 0.001), but the diagnostic validity was relatively low (kappa = 0.414). When real‐time PCR‐positivity for HBoV in BAL was used as a reference for diagnosis, NPA had a good specificity and better positive predictive validity in male patients or those younger than 3 years of age. NPA has a similar yield and a good specificity for diagnosis of LRTIs with HBoV compared to BAL. The best diagnostic validity for NPA was detected in male patients or those younger than 3 years old. J. Med. Virol. 88:211–215, 2016. © 2015 Wiley Periodicals, Inc. |
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AbstractList | To compare the presence of human bocavirus (HBoV) in nasopharyngeal aspirates (NPA) versus broncho-alveolar lavage fluids (BAL) in children with lower respiratory tract infections (LRTIs), as revealed by real-time PCR, in order to confirm the diagnostic validity of NPA samples. A retrospective 5-year study was performed from 2009 to 2014 in 1,194 patients under the age of 17 years (mean age of 3 years) that were diagnosed with LRTIs and from whom both NPA and BAL were obtained. Clinical and demographic data were recorded, and NPA and BAL samples were analyzed for HBoV-positivity by real-time PCR. Of the 1,194 patients enrolled, 65 (5.4%) patients had HBoV detected from NPA, and 61 (5.1%) had HBoV detected from BAL. For HBoV, there was a significant association between the NPA and BAL samples (P < 0.001), but the diagnostic validity was relatively low (kappa = 0.414). When real-time PCR-positivity for HBoV in BAL was used as a reference for diagnosis, NPA had a good specificity and better positive predictive validity in male patients or those younger than 3 years of age. NPA has a similar yield and a good specificity for diagnosis of LRTIs with HBoV compared to BAL. The best diagnostic validity for NPA was detected in male patients or those younger than 3 years old.To compare the presence of human bocavirus (HBoV) in nasopharyngeal aspirates (NPA) versus broncho-alveolar lavage fluids (BAL) in children with lower respiratory tract infections (LRTIs), as revealed by real-time PCR, in order to confirm the diagnostic validity of NPA samples. A retrospective 5-year study was performed from 2009 to 2014 in 1,194 patients under the age of 17 years (mean age of 3 years) that were diagnosed with LRTIs and from whom both NPA and BAL were obtained. Clinical and demographic data were recorded, and NPA and BAL samples were analyzed for HBoV-positivity by real-time PCR. Of the 1,194 patients enrolled, 65 (5.4%) patients had HBoV detected from NPA, and 61 (5.1%) had HBoV detected from BAL. For HBoV, there was a significant association between the NPA and BAL samples (P < 0.001), but the diagnostic validity was relatively low (kappa = 0.414). When real-time PCR-positivity for HBoV in BAL was used as a reference for diagnosis, NPA had a good specificity and better positive predictive validity in male patients or those younger than 3 years of age. NPA has a similar yield and a good specificity for diagnosis of LRTIs with HBoV compared to BAL. The best diagnostic validity for NPA was detected in male patients or those younger than 3 years old. To compare the presence of human bocavirus (HBoV) in nasopharyngeal aspirates (NPA) versus broncho‐alveolar lavage fluids (BAL) in children with lower respiratory tract infections (LRTIs), as revealed by real‐time PCR, in order to confirm the diagnostic validity of NPA samples. A retrospective 5‐year study was performed from 2009 to 2014 in 1,194 patients under the age of 17 years (mean age of 3 years) that were diagnosed with LRTIs and from whom both NPA and BAL were obtained. Clinical and demographic data were recorded, and NPA and BAL samples were analyzed for HBoV‐positivity by real‐time PCR. Of the 1,194 patients enrolled, 65 (5.4%) patients had HBoV detected from NPA, and 61 (5.1%) had HBoV detected from BAL. For HBoV, there was a significant association between the NPA and BAL samples (P < 0.001), but the diagnostic validity was relatively low (kappa = 0.414). When real‐time PCR‐positivity for HBoV in BAL was used as a reference for diagnosis, NPA had a good specificity and better positive predictive validity in male patients or those younger than 3 years of age. NPA has a similar yield and a good specificity for diagnosis of LRTIs with HBoV compared to BAL. The best diagnostic validity for NPA was detected in male patients or those younger than 3 years old. J. Med. Virol. 88:211–215, 2016. © 2015 Wiley Periodicals, Inc. To compare the presence of human bocavirus (HBoV) in nasopharyngeal aspirates (NPA) versus broncho-alveolar lavage fluids (BAL) in children with lower respiratory tract infections (LRTIs), as revealed by real-time PCR, in order to confirm the diagnostic validity of NPA samples. A retrospective 5-year study was performed from 2009 to 2014 in 1,194 patients under the age of 17 years (mean age of 3 years) that were diagnosed with LRTIs and from whom both NPA and BAL were obtained. Clinical and demographic data were recorded, and NPA and BAL samples were analyzed for HBoV-positivity by real-time PCR. Of the 1,194 patients enrolled, 65 (5.4%) patients had HBoV detected from NPA, and 61 (5.1%) had HBoV detected from BAL. For HBoV, there was a significant association between the NPA and BAL samples (P< 0.001), but the diagnostic validity was relatively low (kappa=0.414). When real-time PCR-positivity for HBoV in BAL was used as a reference for diagnosis, NPA had a good specificity and better positive predictive validity in male patients or those younger than 3 years of age. NPA has a similar yield and a good specificity for diagnosis of LRTIs with HBoV compared to BAL. The best diagnostic validity for NPA was detected in male patients or those younger than 3 years old. J. Med. Virol. 88:211-215, 2016. To compare the presence of human bocavirus (HBoV) in nasopharyngeal aspirates (NPA) versus broncho-alveolar lavage fluids (BAL) in children with lower respiratory tract infections (LRTIs), as revealed by real-time PCR, in order to confirm the diagnostic validity of NPA samples. A retrospective 5-year study was performed from 2009 to 2014 in 1,194 patients under the age of 17 years (mean age of 3 years) that were diagnosed with LRTIs and from whom both NPA and BAL were obtained. Clinical and demographic data were recorded, and NPA and BAL samples were analyzed for HBoV-positivity by real-time PCR. Of the 1,194 patients enrolled, 65 (5.4%) patients had HBoV detected from NPA, and 61 (5.1%) had HBoV detected from BAL. For HBoV, there was a significant association between the NPA and BAL samples (P < 0.001), but the diagnostic validity was relatively low (kappa = 0.414). When real-time PCR-positivity for HBoV in BAL was used as a reference for diagnosis, NPA had a good specificity and better positive predictive validity in male patients or those younger than 3 years of age. NPA has a similar yield and a good specificity for diagnosis of LRTIs with HBoV compared to BAL. The best diagnostic validity for NPA was detected in male patients or those younger than 3 years old. |
Author | Yan, Yong-Dong Li, Ling Chen, Zheng-Rong Xu, Hong-Mei Shao, Xue-Jun He, Li-Ping Yin, Fang Ji, Wei Zhu, Tian |
Author_xml | – sequence: 1 givenname: Ling surname: Li fullname: Li, Ling organization: Department of Respiratory Medicine, Children's Hospital of Soochow University, Suzhou, China – sequence: 2 givenname: Tian surname: Zhu fullname: Zhu, Tian organization: National Engineering Laboratory for Modern Silk, College of Textile and Clothing Engineering, Soochow University, Suzhou, China – sequence: 3 givenname: Zheng-Rong surname: Chen fullname: Chen, Zheng-Rong organization: Department of Respiratory Medicine, Children's Hospital of Soochow University, Suzhou, China – sequence: 4 givenname: Yong-Dong surname: Yan fullname: Yan, Yong-Dong organization: Department of Respiratory Medicine, Children's Hospital of Soochow University, Suzhou, China – sequence: 5 givenname: Li-Ping surname: He fullname: He, Li-Ping organization: Department of Pediatrics, Suzhou Municipal Hospital, Suzhou, China – sequence: 6 givenname: Hong-Mei surname: Xu fullname: Xu, Hong-Mei organization: Department of Pediatrics, Suzhou Municipal Hospital, Suzhou, China – sequence: 7 givenname: Xue-Jun surname: Shao fullname: Shao, Xue-Jun organization: Department of Clinical Laboratory, Children's Hospital of Soochow University, Suzhou, China – sequence: 8 givenname: Fang surname: Yin fullname: Yin, Fang organization: Department of Respiratory Medicine, Children's Hospital of Soochow University, Suzhou, China – sequence: 9 givenname: Wei surname: Ji fullname: Ji, Wei email: Correspondence to: Wei Ji, Department of Respiratory Medicine, Children's Hospital of Soochow University, No. 303, JingDe Road, Suzhou 215003, China. , szdxjiwei@163.com organization: Department of Respiratory Medicine, Children's Hospital of Soochow University, Suzhou, China |
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Cites_doi | 10.1097/INF.0b013e31817acfaa 10.1086/512163 10.1007/s00705-012-1492-7 10.1086/526532 10.1016/S1695-4033(07)70609-4 10.3201/eid1402.070851 10.1128/JCM.02362-10 10.1016/j.jcv.2007.01.008 10.1002/ppul.20652 10.1097/INF.0b013e3181757b16 10.1371/journal.pone.0021042 10.1128/JCM.44.3.1132-1134.2006 10.1007/s00705-013-1863-8 10.1056/NEJMra011994 10.1086/512196 10.3201/eid1712.110574 10.1016/j.jcv.2013.09.016 10.1186/1743-422X-8-239 10.1016/j.diagmicrobio.2013.09.006 10.1086/508219 10.1073/pnas.0504666102 10.1097/INF.0b013e3181a854ae 10.3201/eid1509.090204 |
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SubjectTerms | Adolescent Bodily Secretions - virology broncho-alveolar lavage fluids Bronchoalveolar Lavage Fluid - virology Child Child, Preschool children Children & youth Female human bocavirus Human bocavirus - isolation & purification Humans Infant Infant, Newborn Male Medical diagnosis nasopharyngeal aspirates Nasopharynx - virology Parvoviridae Infections - diagnosis Parvoviridae Infections - virology Real-Time Polymerase Chain Reaction - methods Respiratory Tract Infections - diagnosis Respiratory Tract Infections - virology Retrospective Studies Specimen Handling - methods Virology |
Title | Detection of human bocavirus in nasopharyngeal aspirates versus in broncho-alveolar lavage fluids in children with lower respiratory tract infections |
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