Molecular structure, FT-IR, vibrational assignments, HOMO–LUMO analysis and molecular docking study of 1-[5-(4-Bromophenyl)-3-(4-fluorophenyl)-4,5-dihydro-1H-pyrazol-1-yl]ethanone

Molecular structure, FT-IR, Vibrational assignments, HOMO–LUMO analysis and molecular docking study of 1-[5-(4-Bromophenyl)-3-(4-fluorophenyl)-4,5-dihydro-1H-pyrazol-1-yl]ethanone. [Display omitted] •IR, spectrum and theoretical analysis were reported.•The wavenumbers are calculated theoretically us...

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Published inSpectrochimica acta. Part A, Molecular and biomolecular spectroscopy Vol. 136; pp. 473 - 482
Main Authors Mary, Y. Sheena, Panicker, C. Yohannan, Sapnakumari, M., Narayana, B., Sarojini, B.K., Al-Saadi, Abdulaziz A., Van Alsenoy, Christian, War, Javeed Ahmad, Fun, H.K.
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Published England Elsevier B.V 05.02.2015
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Abstract Molecular structure, FT-IR, Vibrational assignments, HOMO–LUMO analysis and molecular docking study of 1-[5-(4-Bromophenyl)-3-(4-fluorophenyl)-4,5-dihydro-1H-pyrazol-1-yl]ethanone. [Display omitted] •IR, spectrum and theoretical analysis were reported.•The wavenumbers are calculated theoretically using Gaussian09 software.•The wavenumbers are assigned using PED analysis.•The geometrical parameters are in agreement with XRD data.•Molecular docking studies are reported. The optimized molecular structure, vibrational frequencies, corresponding vibrational assignments of 1-[5-(4-bromophenyl)-3-(4-fluorophenyl)-4,5-dihydro-1H-pyrazol-1-yl]ethanone have been investigated experimentally and theoretically using Gaussian09 software package. The title compound was optimized using the HF/6-31G(d) (6D, 7F), B3LYP/6-31G (6D, 7F) and B3LYP/6-311++G(d,p) (5D, 7F) calculations. The B3LYP/6-311++G(d,p) (5D, 7F) results and in agreement with experimental infrared bands. The geometrical parameters are in agreement with XRD data. The stability of the molecule arising from hyper-conjugative interaction and charge delocalization has been analyzed using NBO analysis. The HOMO and LUMO analysis is used to determine the charge transfer within the molecule. Molecular electrostatic potential was also performed. From the MEP it is evident that the negative charge covers the CO group and the positive region is over the rings. First hyperpolarizability is calculated in order to find its role in nonlinear optics. Molecular docking studies suggest that the compound might exhibit inhibitory activity against TPII and may act as anti-neoplastic agent.
AbstractList The optimized molecular structure, vibrational frequencies, corresponding vibrational assignments of 1-[5-(4-bromophenyl)-3-(4-fluorophenyl)-4,5-dihydro-1H-pyrazol-1-yl]ethanone have been investigated experimentally and theoretically using Gaussian09 software package. The title compound was optimized using the HF/6-31G(d) (6D, 7F), B3LYP/6-31G (6D, 7F) and B3LYP/6-311++G(d,p) (5D, 7F) calculations. The B3LYP/6-311++G(d,p) (5D, 7F) results and in agreement with experimental infrared bands. The geometrical parameters are in agreement with XRD data. The stability of the molecule arising from hyper-conjugative interaction and charge delocalization has been analyzed using NBO analysis. The HOMO and LUMO analysis is used to determine the charge transfer within the molecule. Molecular electrostatic potential was also performed. From the MEP it is evident that the negative charge covers the C=O group and the positive region is over the rings. First hyperpolarizability is calculated in order to find its role in nonlinear optics. Molecular docking studies suggest that the compound might exhibit inhibitory activity against TPII and may act as anti-neoplastic agent.
Molecular structure, FT-IR, Vibrational assignments, HOMO–LUMO analysis and molecular docking study of 1-[5-(4-Bromophenyl)-3-(4-fluorophenyl)-4,5-dihydro-1H-pyrazol-1-yl]ethanone. [Display omitted] •IR, spectrum and theoretical analysis were reported.•The wavenumbers are calculated theoretically using Gaussian09 software.•The wavenumbers are assigned using PED analysis.•The geometrical parameters are in agreement with XRD data.•Molecular docking studies are reported. The optimized molecular structure, vibrational frequencies, corresponding vibrational assignments of 1-[5-(4-bromophenyl)-3-(4-fluorophenyl)-4,5-dihydro-1H-pyrazol-1-yl]ethanone have been investigated experimentally and theoretically using Gaussian09 software package. The title compound was optimized using the HF/6-31G(d) (6D, 7F), B3LYP/6-31G (6D, 7F) and B3LYP/6-311++G(d,p) (5D, 7F) calculations. The B3LYP/6-311++G(d,p) (5D, 7F) results and in agreement with experimental infrared bands. The geometrical parameters are in agreement with XRD data. The stability of the molecule arising from hyper-conjugative interaction and charge delocalization has been analyzed using NBO analysis. The HOMO and LUMO analysis is used to determine the charge transfer within the molecule. Molecular electrostatic potential was also performed. From the MEP it is evident that the negative charge covers the CO group and the positive region is over the rings. First hyperpolarizability is calculated in order to find its role in nonlinear optics. Molecular docking studies suggest that the compound might exhibit inhibitory activity against TPII and may act as anti-neoplastic agent.
Author Al-Saadi, Abdulaziz A.
Van Alsenoy, Christian
Panicker, C. Yohannan
Narayana, B.
Sapnakumari, M.
Fun, H.K.
Sarojini, B.K.
Mary, Y. Sheena
War, Javeed Ahmad
Author_xml – sequence: 1
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  surname: Mary
  fullname: Mary, Y. Sheena
  organization: Department of Physics, Fatima Mata National College, Kollam, Kerala, India
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  givenname: C. Yohannan
  surname: Panicker
  fullname: Panicker, C. Yohannan
  email: cyphyp@rediffmail.com
  organization: Department of Physics, TKM College of Arts and Science, Kollam, Kerala, India
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  givenname: M.
  surname: Sapnakumari
  fullname: Sapnakumari, M.
  organization: Department of Studies in Chemistry, Mangalore University, Mangalagangotri, Karnataka, India
– sequence: 4
  givenname: B.
  surname: Narayana
  fullname: Narayana, B.
  organization: Department of Studies in Chemistry, Mangalore University, Mangalagangotri, Karnataka, India
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  givenname: B.K.
  surname: Sarojini
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  organization: Industrial Chemistry Division, Department of Studies in Chemistry, Mangalore University, Mangalagangotri, Karnataka, India
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  givenname: Abdulaziz A.
  surname: Al-Saadi
  fullname: Al-Saadi, Abdulaziz A.
  organization: Department of Chemistry, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
– sequence: 7
  givenname: Christian
  surname: Van Alsenoy
  fullname: Van Alsenoy, Christian
  organization: Department of Chemistry, University of Antwerp, B2610 Antwerp, Belgium
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  givenname: Javeed Ahmad
  surname: War
  fullname: War, Javeed Ahmad
  organization: Department of Chemistry, Dr. H.S. Gour Central University, Sagar, MP, India
– sequence: 9
  givenname: H.K.
  surname: Fun
  fullname: Fun, H.K.
  organization: X-Ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, Penang 11800, Malaysia
BackLink https://www.ncbi.nlm.nih.gov/pubmed/25448948$$D View this record in MEDLINE/PubMed
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Keywords FT-IR
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DFT
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Molecular docking
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Snippet Molecular structure, FT-IR, Vibrational assignments, HOMO–LUMO analysis and molecular docking study of...
The optimized molecular structure, vibrational frequencies, corresponding vibrational assignments of...
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SubjectTerms DFT
DNA Topoisomerases, Type II - metabolism
Electrons
FT-IR
Humans
Ligands
MEP
Molecular Conformation
Molecular docking
Molecular Docking Simulation
Nonlinear Dynamics
Optical Phenomena
Pyrazoles - chemistry
Pyrazoles - pharmacology
Pyrazoline
Spectroscopy, Fourier Transform Infrared
Spectrum Analysis, Raman
Static Electricity
Vibration
Title Molecular structure, FT-IR, vibrational assignments, HOMO–LUMO analysis and molecular docking study of 1-[5-(4-Bromophenyl)-3-(4-fluorophenyl)-4,5-dihydro-1H-pyrazol-1-yl]ethanone
URI https://dx.doi.org/10.1016/j.saa.2014.09.060
https://www.ncbi.nlm.nih.gov/pubmed/25448948
Volume 136
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