The phylogenetic position of an Armillaria species from Amami-Oshima, a subtropical island of Japan, based on elongation factor and ITS sequences
An undetermined Armillaria species was collected on Amami-Oshima, a subtropical island of Japan. The phylogenetic position of the Armillaria sp. was determined using sequences of the elongation factor-1α (EF-1α) gene and the internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2) of ribosomal DNA...
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| Published in | Mycoscience Vol. 52; no. 1; pp. 53 - 58 |
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| Main Authors | , , , , |
| Format | Journal Article |
| Language | English |
| Published |
Japan
Elsevier B.V
01.01.2011
Japan : Springer Japan Springer Japan |
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| Abstract | An undetermined Armillaria species was collected on Amami-Oshima, a subtropical island of Japan. The phylogenetic position of the Armillaria sp. was determined using sequences of the elongation factor-1α (EF-1α) gene and the internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2) of ribosomal DNA (rDNA). The phylogenetic analyses based on EF-1α and ITS sequences showed that this species differs from known Japanese taxa of Armillaria. The sequences of this species and A. novaezelandiae from Southeast Asia were contained in a strongly supported clade, which was adjacent to a well-supported sister clade containing A. novae-zelandiae from Australia and New Zealand. |
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| AbstractList | An undetermined Armillaria species was collected on Amami-Oshima, a subtropical island of Japan. The phylogenetic position of the Armillaria sp. was determined using sequences of the elongation factor-1 alpha (EF-1 alpha ) gene and the internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2) of ribosomal DNA (rDNA). The phylogenetic analyses based on EF-1 alpha and ITS sequences showed that this species differs from known Japanese taxa of Armillaria. The sequences of this species and A. novae-zelandiae from Southeast Asia were contained in a strongly supported clade, which was adjacent to a well-supported sister clade containing A. novae-zelandiae from Australia and New Zealand. An undetermined Armillaria species was collected on Amami-Oshima, a subtropical island of Japan. The phylogenetic position of the Armillaria sp. was determined using sequences of the elongation factor-1α ( EF-1α ) gene and the internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2) of ribosomal DNA (rDNA). The phylogenetic analyses based on EF-1α and ITS sequences showed that this species differs from known Japanese taxa of Armillaria . The sequences of this species and A. novae - zelandiae from Southeast Asia were contained in a strongly supported clade, which was adjacent to a well-supported sister clade containing A . novae - zelandiae from Australia and New Zealand. An undetermined Armillaria species was collected on Amami-Oshima, a subtropical island of Japan. The phylogenetic position of the Armillaria sp. was determined using sequences of the elongation factor-1α (EF-1α) gene and the internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2) of ribosomal DNA (rDNA). The phylogenetic analyses based on EF-1α and ITS sequences showed that this species differs from known Japanese taxa of Armillaria. The sequences of this species and A. novae-zelandiae from Southeast Asia were contained in a strongly supported clade, which was adjacent to a well-supported sister clade containing A. novae-zelandiae from Australia and New Zealand. An undetermined Armillaria species was collected on Amami-Oshima, a subtropical island of Japan. The phylogenetic position of the Armillaria sp. was determined using sequences of the elongation factor-1α (EF-1α) gene and the internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2) of ribosomal DNA (rDNA). The phylogenetic analyses based on EF-1α and ITS sequences showed that this species differs from known Japanese taxa of Armillaria. The sequences of this species and A. novaezelandiae from Southeast Asia were contained in a strongly supported clade, which was adjacent to a well-supported sister clade containing A. novae-zelandiae from Australia and New Zealand. |
| Author | Neda, Hitoshi Klopfenstein, Ned B. Hasegawa, Eri Kim, Mee-Sook Ota, Yuko |
| Author_xml | – sequence: 1 givenname: Yuko surname: Ota fullname: Ota, Yuko email: yuota@ffpri.affrc.go.jp – sequence: 2 givenname: Mee-Sook surname: Kim fullname: Kim, Mee-Sook – sequence: 3 givenname: Hitoshi surname: Neda fullname: Neda, Hitoshi – sequence: 4 givenname: Ned B. surname: Klopfenstein fullname: Klopfenstein, Ned B. – sequence: 5 givenname: Eri surname: Hasegawa fullname: Hasegawa, Eri |
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| CitedBy_id | crossref_primary_10_1016_j_myc_2012_12_003 crossref_primary_10_1080_00275514_2017_1419031 crossref_primary_10_3390_pathogens7040083 crossref_primary_10_1016_j_funbio_2011_05_008 crossref_primary_10_3390_jof9060615 crossref_primary_10_1080_00275514_2017_1286572 crossref_primary_10_1186_s40490_016_0058_y crossref_primary_10_1111_efp_12447 crossref_primary_10_1111_efp_12056 crossref_primary_10_1139_cjb_2022_0052 crossref_primary_10_1016_j_myc_2015_05_001 |
| Cites_doi | 10.2307/3761435 10.1111/j.1439-0329.2007.00485.x 10.1094/PDIS.1998.82.5.537 10.2307/4108283 10.1111/j.1365-294X.1993.tb00005.x 10.1080/10635150600755453 10.1093/nar/gkn180 10.2307/2408678 10.1007/BF02268526 10.1016/S0968-0004(98)01285-7 10.1007/BF02268548 10.1071/AP06056 10.1007/s10267-009-0505-1 10.2509/naf2008.003.00717 10.3852/09-238 10.1080/10635150390235520 10.1007/s11557-009-0597-1 10.3852/09-105 10.2307/3762039 10.1007/S10267-009-0505-1 |
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| Keywords | Armillaria novaezelandiae Armillaria fuscipes |
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| References | Hall (bib0075) 1999; 41 Shaw, Kile (bib0135) 1991 Cha, Sung, Igarashi (bib0025) 1992; 49 Jeanmougin, Tompson, Gouy, Higgins, Gibson (bib0090) 1998; 23 Anisimova, Gascuel (bib0005) 2006; 55 Nagasawa (bib0105) 1991 Volk, Burdsall (bib0150) 1995; 8 Coetzee, Wingwield, Coutinho, Wingfield (bib0035) 2000; 92 Cha, Igarashi (bib0020) 1997; 36 Petch (bib0125) 1909; 4 Fox (bib0060) 2000 Hasegawa, Ota, Hattori, Kikuchi (bib0080) 2010; 102 Stevenson (bib0140) 1964; 19 Felsenstein (bib0055) 1985; 39 Dai, Cui, Yuan, Li (bib0045) 2007; 37 Neda (bib0110) 2009 Dereeper, Guignon, Blanc, Audic, Buffet, Chevenet, Dufayard, Guindon, Lefort, Lescot (bib0050) 2008 Guindon, Gascuel (bib0070) 2003; 52 Hood, Redfern, Kile (bib0085) 1991 Ota, Matsushita, Nagasawa, Terashita, Fukuda, Suzuki (bib0115) 1998; 82 Ota, Sotome, Hasegawa (bib0120) 2009; 50 Maphosa, Wingfield, Coetzee, Mwenje, Wingfield (bib0100) 2006; 35 Antonín, Tomšovský, Sedlák, Májek, Jankovský (bib0010) 2009; 8 Gardes, Bruns (bib0065) 1993; 2 Swofford (bib0145) 2002 Cha, Sung, Igarashi (bib0030) 1994; 35 Burdsall, Volk (bib0015) 2008; 3 Pildain, Coetzee, Wingfield, Wingfield, Rajchenberg M (bib0130) 2010; 102 Coetzee, Bloomer, Ridley, Wingfield (bib0040) 2003; 95 Kudo, Nagasawa (bib0095) 2003; 41 Cha, Sung, Igarashi (CR5) 1992; 49 Stevenson (CR30) 1964; 19 Dai, Cui, Yuan, Li (CR10) 2007; 37 Felsenstein (CR12) 1985; 39 CR18 Pildain, Coetzee, Wingfield, Wingfield, Rajchenberg (CR28) 2010; 102 Dereeper, Guignon, Blanc, Audic, Buffet, Chevenet, Dufayard, Guindon, Lefort, Lescot (CR11) 2008; 36 Antonín, Tomšovský, Sedlák, Májek, Jankovský (CR2) 2009; 8 Guindon, Gascuel (CR15) 2003; 52 Anisimova, Gascuel (CR1) 2006; 55 Maphosa, Wingfield, Coetzee, Mwenje, Wingfield (CR21) 2006; 35 Swofford (CR31) 2002 Cha, Igarashi (CR4) 1997; 36 Cha, Sung, Igarashi (CR6) 1994; 35 Hall (CR16) 1999; 41 Ota, Matsushita, Nagasawa, Terashita, Fukuda, Suzuki (CR24) 1998; 82 CR29 Fox (CR13) 2000 Burdsall, Volk (CR3) 2008; 3 Jeanmougin, Tompson, Gouy, Higgins, Gibson (CR19) 1998; 23 Hasegawa, Ota, Hattori, Kikuchi (CR17) 2010; 102 CR23 CR22 Petch (CR26) 1909; 4 Coetzee, Wingwield, Coutinho, Wingfield (CR7) 2000; 92 Coetzee, Bloomer, Ridley, Wingfield (CR8) 2003; 95 Kudo, Nagasawa (CR20) 2003; 41 Gardes, Bruns (CR14) 1993; 2 Ota, Sotome, Hasegawa (CR25) 2009; 50 Volk, Burdsall (CR32) 1995; 8 Felsenstein (10.1007/S10267-010-0066-3_bib0055) 1985; 39 Cha (10.1007/S10267-010-0066-3_bib0030) 1994; 35 Shaw (10.1007/S10267-010-0066-3_bib0135) 1991 Jeanmougin (10.1007/S10267-010-0066-3_bib0090) 1998; 23 Swofford (10.1007/S10267-010-0066-3_bib0145) 2002 Volk (10.1007/S10267-010-0066-3_bib0150) 1995; 8 Gardes (10.1007/S10267-010-0066-3_bib0065) 1993; 2 Nagasawa (10.1007/S10267-010-0066-3_bib0105) 1991 Neda (10.1007/S10267-010-0066-3_bib0110) 2009 Antonín (10.1007/S10267-010-0066-3_bib0010) 2009; 8 Petch (10.1007/S10267-010-0066-3_bib0125) 1909; 4 Coetzee (10.1007/S10267-010-0066-3_bib0035) 2000; 92 Fox (10.1007/S10267-010-0066-3_bib0060) 2000 Guindon (10.1007/S10267-010-0066-3_bib0070) 2003; 52 Anisimova (10.1007/S10267-010-0066-3_bib0005) 2006; 55 Coetzee (10.1007/S10267-010-0066-3_bib0040) 2003; 95 Dereeper (10.1007/S10267-010-0066-3_bib0050) 2008 Cha (10.1007/S10267-010-0066-3_bib0025) 1992; 49 Hood (10.1007/S10267-010-0066-3_bib0085) 1991 Ota (10.1007/S10267-010-0066-3_bib0115) 1998; 82 Burdsall (10.1007/S10267-010-0066-3_bib0015) 2008; 3 Kudo (10.1007/S10267-010-0066-3_bib0095) 2003; 41 Hasegawa (10.1007/S10267-010-0066-3_bib0080) 2010; 102 Maphosa (10.1007/S10267-010-0066-3_bib0100) 2006; 35 Ota (10.1007/S10267-010-0066-3_bib0120) 2009; 50 Cha (10.1007/S10267-010-0066-3_bib0020) 1997; 36 Pildain (10.1007/S10267-010-0066-3_bib0130) 2010; 102 Stevenson (10.1007/S10267-010-0066-3_bib0140) 1964; 19 Hall (10.1007/S10267-010-0066-3_bib0075) 1999; 41 Dai (10.1007/S10267-010-0066-3_bib0045) 2007; 37 |
| References_xml | – volume: 41 start-page: 95 year: 1999 end-page: 98 ident: bib0075 article-title: BioEdit: author-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT publication-title: Nucleic Acid Symp Ser contributor: fullname: Hall – year: 1991 ident: bib0085 article-title: in planted hosts publication-title: root disease, USDA Forest Service contributor: fullname: Kile – volume: 35 start-page: 513 year: 2006 end-page: 520 ident: bib0100 article-title: Phylogenetic relationships among publication-title: Austral Plant Pathol contributor: fullname: Wingfield – volume: 37 start-page: 105 year: 2007 end-page: 120 ident: bib0045 article-title: Pathogenic wood-decaying fungi in China publication-title: For Pathol contributor: fullname: Li – volume: 19 start-page: 1 year: 1964 end-page: 56 ident: bib0140 article-title: The agaricales of New Zealand. V. Tricholomataceae publication-title: Kew Bull contributor: fullname: Stevenson – volume: 102 start-page: 392 year: 2010 end-page: 403 ident: bib0130 article-title: Taxonomy of publication-title: Mycologia contributor: fullname: Rajchenberg M – volume: 8 start-page: 1 year: 1995 end-page: 121 ident: bib0150 article-title: A nomenclatural study of publication-title: Synopsis Fungorum contributor: fullname: Burdsall – start-page: 2 year: 2009 ident: bib0110 article-title: Petch in subtropical Japan publication-title: Abstracts of Asian Mycological Congress 2009 contributor: fullname: Neda – volume: 23 start-page: 403 year: 1998 end-page: 405 ident: bib0090 article-title: Multiple sequence alignment with Clustal X publication-title: Trends Biochem Sci contributor: fullname: Gibson – volume: 35 start-page: 39 year: 1994 end-page: 47 ident: bib0030 article-title: Biological species and morphological characteristics of publication-title: Mycoscience contributor: fullname: Igarashi – year: 1991 ident: bib0105 article-title: Taxonomic reassessment of publication-title: Report for a Grant-in-Aid for Scientific Research contributor: fullname: Nagasawa – volume: 102 start-page: 898 year: 2010 end-page: 910 ident: bib0080 article-title: Sequence-based identification of Japanese publication-title: Mycologia contributor: fullname: Kikuchi – volume: 82 start-page: 537 year: 1998 end-page: 543 ident: bib0115 article-title: Biological species of publication-title: Plant Dis contributor: fullname: Suzuki – volume: 95 start-page: 285 year: 2003 end-page: 293 ident: bib0040 article-title: Molecular identification and phylogeny of publication-title: Mycologia contributor: fullname: Wingfield – start-page: W465 year: 2008 end-page: W469 ident: bib0050 article-title: Phylogeny. fr: robust phylogenetic analysis for the non-specialist publication-title: Nucleic Acids Res 36 contributor: fullname: Lescot – volume: 3 start-page: 261 year: 2008 end-page: 267 ident: bib0015 article-title: , an older name for the fungus called publication-title: North Am Fungi contributor: fullname: Volk – volume: 2 start-page: 113 year: 1993 end-page: 118 ident: bib0065 article-title: ITS primers with enhanced specificity for Basidiomycetes: application to identification of mycorrhizae and rust publication-title: Mol Ecol contributor: fullname: Bruns – year: 2002 ident: bib0145 article-title: PAUP*: phylogenetic analysis using parsimony (* and other methods) contributor: fullname: Swofford – volume: 8 start-page: 259 year: 2009 end-page: 271 ident: bib0010 article-title: Morphological and molecular characterization of the publication-title: Mycol Prog contributor: fullname: Jankovský – volume: 50 start-page: 442 year: 2009 end-page: 447 ident: bib0120 article-title: Seven publication-title: Mycoscience contributor: fullname: Hasegawa – volume: 92 start-page: 777 year: 2000 end-page: 785 ident: bib0035 article-title: Identification of the causal agent of publication-title: Mycologia contributor: fullname: Wingfield – volume: 52 start-page: 696 year: 2003 end-page: 704 ident: bib0070 article-title: A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood publication-title: Syst Biol contributor: fullname: Gascuel – volume: 41 start-page: 26 year: 2003 end-page: 34 ident: bib0095 article-title: rediscovered in Aomori Prefecture, northern Japan publication-title: Rep Tottori Mycol Inst contributor: fullname: Nagasawa – volume: 4 start-page: 299 year: 1909 end-page: 307 ident: bib0125 article-title: New Ceylon fungi publication-title: Ann R Botanic Garden Peradeniya contributor: fullname: Petch – volume: 39 start-page: 783 year: 1985 end-page: 791 ident: bib0055 article-title: Confidence limits on phylogenies: an approach using the bootstrap publication-title: Evolution contributor: fullname: Felsenstein – year: 2000 ident: bib0060 article-title: root rot: biology and control of honey fungus contributor: fullname: Fox – volume: 55 start-page: 539 year: 2006 end-page: 552 ident: bib0005 article-title: Approximate likelihood ratio test for branches: a fast, accurate and powerful alternative publication-title: Syst Biol contributor: fullname: Gascuel – volume: 36 start-page: 143 year: 1997 end-page: 146 ident: bib0020 article-title: A note on publication-title: Mycoscience contributor: fullname: Igarashi – year: 1991 ident: bib0135 article-title: root disease USDA Forest Service contributor: fullname: Kile – volume: 49 start-page: 185 year: 1992 end-page: 194 ident: bib0025 article-title: Biological species and morphological characteristics of publication-title: Res Bull Coll Exp For contributor: fullname: Igarashi – ident: CR22 – volume: 92 start-page: 777 year: 2000 end-page: 785 ident: CR7 article-title: Identification of the causal agent of root rot of species in South Africa publication-title: Mycologia doi: 10.2307/3761435 contributor: fullname: Wingfield – ident: CR18 – volume: 37 start-page: 105 year: 2007 end-page: 120 ident: CR10 article-title: Pathogenic wood-decaying fungi in China publication-title: For Pathol doi: 10.1111/j.1439-0329.2007.00485.x contributor: fullname: Li – volume: 41 start-page: 26 year: 2003 end-page: 34 ident: CR20 article-title: rediscovered in Aomori Prefecture, northern Japan publication-title: Rep Tottori Mycol Inst contributor: fullname: Nagasawa – volume: 82 start-page: 537 year: 1998 end-page: 543 ident: CR24 article-title: Biological species of in Japan publication-title: Plant Dis doi: 10.1094/PDIS.1998.82.5.537 contributor: fullname: Suzuki – ident: CR29 – volume: 19 start-page: 1 year: 1964 end-page: 56 ident: CR30 article-title: The agaricales of New Zealand. V. Tricholomataceae publication-title: Kew Bull doi: 10.2307/4108283 contributor: fullname: Stevenson – volume: 2 start-page: 113 year: 1993 end-page: 118 ident: CR14 article-title: ITS primers with enhanced specificity for Basidiomycetes: application to identification of mycorrhizae and rust publication-title: Mol Ecol doi: 10.1111/j.1365-294X.1993.tb00005.x contributor: fullname: Bruns – volume: 55 start-page: 539 year: 2006 end-page: 552 ident: CR1 article-title: Approximate likelihood ratio test for branches: a fast, accurate and powerful alternative publication-title: Syst Biol doi: 10.1080/10635150600755453 contributor: fullname: Gascuel – volume: 36 start-page: W465 year: 2008 end-page: W469 ident: CR11 article-title: Phylogeny.fr: robust phylogenetic analysis for the non-specialist publication-title: Nucleic Acids Res doi: 10.1093/nar/gkn180 contributor: fullname: Lescot – volume: 39 start-page: 783 year: 1985 end-page: 791 ident: CR12 article-title: Confidence limits on phylogenies: an approach using the bootstrap publication-title: Evolution doi: 10.2307/2408678 contributor: fullname: Felsenstein – volume: 35 start-page: 39 year: 1994 end-page: 47 ident: CR6 article-title: Biological species and morphological characteristics of omplex in Hokkaido: and two new species, and publication-title: Mycoscience doi: 10.1007/BF02268526 contributor: fullname: Igarashi – volume: 23 start-page: 403 year: 1998 end-page: 405 ident: CR19 article-title: Multiple sequence alignment with Clustal X publication-title: Trends Biochem Sci doi: 10.1016/S0968-0004(98)01285-7 contributor: fullname: Gibson – ident: CR23 – volume: 36 start-page: 143 year: 1997 end-page: 146 ident: CR4 article-title: A note on subsp nipponica subsp. nov. in Japan publication-title: Mycoscience doi: 10.1007/BF02268548 contributor: fullname: Igarashi – year: 2002 ident: CR31 publication-title: PAUP*: phylogenetic analysis using parsimony (* and other methods), 4.0b10 contributor: fullname: Swofford – volume: 35 start-page: 513 year: 2006 end-page: 520 ident: CR21 article-title: Phylogenetic relationships among species inferred from partial elongation factor 1-alpha DNA sequence data publication-title: Austral Plant Pathol doi: 10.1071/AP06056 contributor: fullname: Wingfield – volume: 4 start-page: 299 year: 1909 end-page: 307 ident: CR26 article-title: New Ceylon fungi publication-title: Ann R Botanic Garden Peradeniya contributor: fullname: Petch – volume: 8 start-page: 1 year: 1995 end-page: 121 ident: CR32 article-title: A nomenclatural study of and species publication-title: Synopsis Fungorum contributor: fullname: Burdsall – volume: 50 start-page: 442 year: 2009 end-page: 447 ident: CR25 article-title: Seven species identified from Hokkaido Island, northern Japan publication-title: Mycoscience doi: 10.1007/s10267-009-0505-1 contributor: fullname: Hasegawa – volume: 3 start-page: 261 year: 2008 end-page: 267 ident: CR3 article-title: , an older name for the fungus called publication-title: North Am Fungi doi: 10.2509/naf2008.003.00717 contributor: fullname: Volk – year: 2000 ident: CR13 publication-title: root rot: biology and control of honey fungus contributor: fullname: Fox – volume: 41 start-page: 95 year: 1999 end-page: 98 ident: CR16 article-title: BioEdit: author-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT publication-title: Nucleic Acid Symp Ser contributor: fullname: Hall – volume: 102 start-page: 898 year: 2010 end-page: 910 ident: CR17 article-title: Sequence-based identification of Japanese species using the elongation factor-1 alpha gene publication-title: Mycologia doi: 10.3852/09-238 contributor: fullname: Kikuchi – volume: 52 start-page: 696 year: 2003 end-page: 704 ident: CR15 article-title: A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood publication-title: Syst Biol doi: 10.1080/10635150390235520 contributor: fullname: Gascuel – volume: 8 start-page: 259 year: 2009 end-page: 271 ident: CR2 article-title: Morphological and molecular characterization of the — complex in the Czech Republic and Slovakia publication-title: Mycol Prog doi: 10.1007/s11557-009-0597-1 contributor: fullname: Jankovský – volume: 49 start-page: 185 year: 1992 end-page: 194 ident: CR5 article-title: Biological species and morphological characteristics of complex in Hokkaido: and publication-title: Res Bull Coll Exp For contributor: fullname: Igarashi – volume: 102 start-page: 392 year: 2010 end-page: 403 ident: CR28 article-title: Taxonomy of in the Patagonian forests of Argentina publication-title: Mycologia doi: 10.3852/09-105 contributor: fullname: Rajchenberg – volume: 95 start-page: 285 year: 2003 end-page: 293 ident: CR8 article-title: Molecular identification and phylogeny of isolates from South America and Indo-Malaysia publication-title: Mycologia doi: 10.2307/3762039 contributor: fullname: Wingfield – volume: 35 start-page: 513 year: 2006 ident: 10.1007/S10267-010-0066-3_bib0100 article-title: Phylogenetic relationships among Armillaria species inferred from partial elongation factor 1-alpha DNA sequence data publication-title: Austral Plant Pathol doi: 10.1071/AP06056 contributor: fullname: Maphosa – volume: 8 start-page: 1 year: 1995 ident: 10.1007/S10267-010-0066-3_bib0150 article-title: A nomenclatural study of Armillaria and Armillariella species publication-title: Synopsis Fungorum contributor: fullname: Volk – year: 1991 ident: 10.1007/S10267-010-0066-3_bib0105 article-title: Taxonomic reassessment of Armillaria mellea in Japan publication-title: Report for a Grant-in-Aid for Scientific Research contributor: fullname: Nagasawa – year: 1991 ident: 10.1007/S10267-010-0066-3_bib0085 article-title: Armillaria in planted hosts contributor: fullname: Hood – year: 2002 ident: 10.1007/S10267-010-0066-3_bib0145 contributor: fullname: Swofford – volume: 8 start-page: 259 year: 2009 ident: 10.1007/S10267-010-0066-3_bib0010 article-title: Morphological and molecular characterization of the Armillaria cepistipes—A. gallica complex in the Czech Republic and Slovakia publication-title: Mycol Prog doi: 10.1007/s11557-009-0597-1 contributor: fullname: Antonín – volume: 2 start-page: 113 year: 1993 ident: 10.1007/S10267-010-0066-3_bib0065 article-title: ITS primers with enhanced specificity for Basidiomycetes: application to identification of mycorrhizae and rust publication-title: Mol Ecol doi: 10.1111/j.1365-294X.1993.tb00005.x contributor: fullname: Gardes – volume: 52 start-page: 696 year: 2003 ident: 10.1007/S10267-010-0066-3_bib0070 article-title: A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood publication-title: Syst Biol doi: 10.1080/10635150390235520 contributor: fullname: Guindon – volume: 102 start-page: 392 year: 2010 ident: 10.1007/S10267-010-0066-3_bib0130 article-title: Taxonomy of Armillaria in the Patagonian forests of Argentina publication-title: Mycologia doi: 10.3852/09-105 contributor: fullname: Pildain – volume: 102 start-page: 898 year: 2010 ident: 10.1007/S10267-010-0066-3_bib0080 article-title: Sequence-based identification of Japanese Armillaria species using the elongation factor-1 alpha gene publication-title: Mycologia doi: 10.3852/09-238 contributor: fullname: Hasegawa – volume: 49 start-page: 185 year: 1992 ident: 10.1007/S10267-010-0066-3_bib0025 article-title: Biological species and morphological characteristics of Armillaria mellea complex in Hokkaido: A. ostoyae and A. bulbosa publication-title: Res Bull Coll Exp For contributor: fullname: Cha – volume: 3 start-page: 261 year: 2008 ident: 10.1007/S10267-010-0066-3_bib0015 article-title: Armillaira solidipes, an older name for the fungus called Armillaria ostoyae publication-title: North Am Fungi doi: 10.2509/naf2008.003.00717 contributor: fullname: Burdsall – volume: 50 start-page: 442 year: 2009 ident: 10.1007/S10267-010-0066-3_bib0120 article-title: Seven Armillaria species identified from Hokkaido Island, northern Japan publication-title: Mycoscience doi: 10.1007/S10267-009-0505-1 contributor: fullname: Ota – start-page: 2 year: 2009 ident: 10.1007/S10267-010-0066-3_bib0110 article-title: Armillaria fuscipes Petch in subtropical Japan contributor: fullname: Neda – volume: 37 start-page: 105 year: 2007 ident: 10.1007/S10267-010-0066-3_bib0045 article-title: Pathogenic wood-decaying fungi in China publication-title: For Pathol doi: 10.1111/j.1439-0329.2007.00485.x contributor: fullname: Dai – start-page: W465 year: 2008 ident: 10.1007/S10267-010-0066-3_bib0050 article-title: Phylogeny. fr: robust phylogenetic analysis for the non-specialist publication-title: Nucleic Acids Res 36 doi: 10.1093/nar/gkn180 contributor: fullname: Dereeper – volume: 39 start-page: 783 year: 1985 ident: 10.1007/S10267-010-0066-3_bib0055 article-title: Confidence limits on phylogenies: an approach using the bootstrap publication-title: Evolution doi: 10.2307/2408678 contributor: fullname: Felsenstein – volume: 92 start-page: 777 year: 2000 ident: 10.1007/S10267-010-0066-3_bib0035 article-title: Identification of the causal agent of Armillaria root rot of Pinus species in South Africa publication-title: Mycologia doi: 10.2307/3761435 contributor: fullname: Coetzee – volume: 41 start-page: 95 year: 1999 ident: 10.1007/S10267-010-0066-3_bib0075 article-title: BioEdit: author-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT publication-title: Nucleic Acid Symp Ser contributor: fullname: Hall – volume: 4 start-page: 299 year: 1909 ident: 10.1007/S10267-010-0066-3_bib0125 article-title: New Ceylon fungi publication-title: Ann R Botanic Garden Peradeniya contributor: fullname: Petch – volume: 36 start-page: 143 year: 1997 ident: 10.1007/S10267-010-0066-3_bib0020 article-title: A note on Armillaria mellea subsp. nipponica subsp. nov. in Japan publication-title: Mycoscience doi: 10.1007/BF02268548 contributor: fullname: Cha – volume: 55 start-page: 539 year: 2006 ident: 10.1007/S10267-010-0066-3_bib0005 article-title: Approximate likelihood ratio test for branches: a fast, accurate and powerful alternative publication-title: Syst Biol doi: 10.1080/10635150600755453 contributor: fullname: Anisimova – volume: 82 start-page: 537 year: 1998 ident: 10.1007/S10267-010-0066-3_bib0115 article-title: Biological species of Armillaria in Japan publication-title: Plant Dis doi: 10.1094/PDIS.1998.82.5.537 contributor: fullname: Ota – year: 2000 ident: 10.1007/S10267-010-0066-3_bib0060 contributor: fullname: Fox – volume: 35 start-page: 39 year: 1994 ident: 10.1007/S10267-010-0066-3_bib0030 article-title: Biological species and morphological characteristics of Armillaria mellea complex in Hokkaido: A. sinapina and two new species. A. jezoensis and A. singula publication-title: Mycoscience doi: 10.1007/BF02268526 contributor: fullname: Cha – volume: 95 start-page: 285 year: 2003 ident: 10.1007/S10267-010-0066-3_bib0040 article-title: Molecular identification and phylogeny of Armillaria isolates from South America and Indo-Malaysia publication-title: Mycologia doi: 10.2307/3762039 contributor: fullname: Coetzee – volume: 23 start-page: 403 year: 1998 ident: 10.1007/S10267-010-0066-3_bib0090 article-title: Multiple sequence alignment with Clustal X publication-title: Trends Biochem Sci doi: 10.1016/S0968-0004(98)01285-7 contributor: fullname: Jeanmougin – volume: 41 start-page: 26 year: 2003 ident: 10.1007/S10267-010-0066-3_bib0095 article-title: Armillaria ectypa rediscovered in Aomori Prefecture, northern Japan publication-title: Rep Tottori Mycol Inst contributor: fullname: Kudo – year: 1991 ident: 10.1007/S10267-010-0066-3_bib0135 contributor: fullname: Shaw – volume: 19 start-page: 1 year: 1964 ident: 10.1007/S10267-010-0066-3_bib0140 article-title: The agaricales of New Zealand. V. Tricholomataceae publication-title: Kew Bull doi: 10.2307/4108283 contributor: fullname: Stevenson |
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| SubjectTerms | Armillaria Armillaria fuscipes Armillaria novae-zelandiae Armillaria novaezelandiae Biomedical and Life Sciences Biotechnology Eukaryotic Microbiology Life Sciences Microbial Ecology Microbiology Short Communication |
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| Title | The phylogenetic position of an Armillaria species from Amami-Oshima, a subtropical island of Japan, based on elongation factor and ITS sequences |
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