Risks of double-counting in deep sequencing

Saved in:
Bibliographic Details
Published inProceedings of the National Academy of Sciences - PNAS Vol. 111; no. 16; p. E1560
Main Authors Schmitt, Michael W., Fox, Edward J., Salk, Jesse J.
Format Journal Article
LanguageEnglish
Published United States National Acad Sciences 22.04.2014
National Academy of Sciences
Subjects
Online AccessGet full text

Cover

Loading…
Author Michael W. Schmitt
Jesse J. Salk
Edward J. Fox
Author_xml – sequence: 1
  givenname: Michael W.
  surname: Schmitt
  fullname: Schmitt, Michael W.
  organization: Departments of aPathology and, Medicine, University of Washington School of Medicine, Seattle, WA 98195
– sequence: 2
  givenname: Edward J.
  surname: Fox
  fullname: Fox, Edward J.
  organization: Departments of aPathology and
– sequence: 3
  givenname: Jesse J.
  surname: Salk
  fullname: Salk, Jesse J.
  organization: Departments of aPathology and, Medicine, University of Washington School of Medicine, Seattle, WA 98195
BackLink https://www.ncbi.nlm.nih.gov/pubmed/24706907$$D View this record in MEDLINE/PubMed
BookMark eNp1UV1LHDEUDUXRdetz38o8FsrovfmYzLwIRawWBEHsc8hk7tjobLJOZoT--2Zx17aCebmQez4u5xyxvRADMfYJ4QRBi9N1sOkEJUAjMb8PbIHQYFnJBvbYAoDrspZcHrKjlB4gw1QNB-yQSw1VA3rBvt769JiK2BddnNuBShfnMPlwX_hQdETrItHTTMHlr49sv7dDouPtXLKf3y_uzq_K65vLH-ffrksnsZ7KvrUdV31bWeROW1TWdlpzoRHrmpOtSTQdtaTIcYvCgpOdqog3UgkC3YklO3vRXc_tijpHYRrtYNajX9nxt4nWm_83wf8y9_HZ5BygFlUW-LIVGGM-Pk1m5ZOjYbCB4pwMqnwJihxMhn7-1-vVZJdQBqgXgBtjSiP1xvnJTj5urP1gEMymCbNpwvxtIvNO3_B20u8ziu0pm8UrGtFgZS5QVSD-ABy5lds
CitedBy_id crossref_primary_10_1007_s00285_023_01961_1
crossref_primary_10_1038_nrg_2017_117
crossref_primary_10_1007_s00204_020_02832_0
crossref_primary_10_1016_j_tibtech_2018_02_009
crossref_primary_10_1073_pnas_1402606111
Cites_doi 10.1073/pnas.1110064108
10.1073/pnas.1208715109
10.1073/pnas.1319590110
10.1073/pnas.1105422108
ContentType Journal Article
DBID AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
7X8
5PM
DOI 10.1073/pnas.1400941111
DatabaseName CrossRef
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
MEDLINE - Academic
PubMed Central (Full Participant titles)
DatabaseTitle CrossRef
MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
MEDLINE - Academic
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
DeliveryMethod fulltext_linktorsrc
Discipline Sciences (General)
DocumentTitleAlternate Risks of double-counting in deep sequencing
EISSN 1091-6490
EndPage E1560
ExternalDocumentID PMC4000836
24706907
10_1073_pnas_1400941111
111_16_E1560
Genre Letter
Comment
Commentary
Correspondence
GroupedDBID -
02
0R
123
1AW
29P
2WC
4.4
53G
55
5RE
5VS
85S
AAPBV
ABBHK
ABFLS
ABOCM
ABPPZ
ABPTK
ABZEH
ACGOD
ACIWK
ACNCT
ACPRK
ADACO
ADULT
ADZLD
AENEX
AFFNX
AFRAH
ALMA_UNASSIGNED_HOLDINGS
ASUFR
BKOMP
CS3
D0L
DCCCD
DIK
DNJUQ
DOOOF
DU5
DWIUU
DZ
E3Z
EBS
EJD
F20
F5P
FRP
GX1
H13
HH5
HYE
JLS
JPM
JSG
JSODD
JST
KM
KQ8
L7B
LU7
N9A
N~3
O9-
OK1
PNE
PQEST
PQQKQ
R.V
RHF
RHI
RNA
RNS
RPM
RXW
SA0
SJN
TAE
TN5
UKR
VQA
WH7
WOQ
WOW
X
X7M
XHC
Y6R
ZA5
---
-DZ
-~X
.55
0R~
2AX
2FS
AACGO
AAFWJ
AANCE
AAYXX
ABPLY
ABTLG
ABXSQ
ACHIC
ADQXQ
ADXHL
AEUPB
AEXZC
AFOSN
AQVQM
CITATION
IPSME
JAAYA
JBMMH
JENOY
JHFFW
JKQEH
JLXEF
W8F
XSW
YBH
YKV
YSK
ZCA
~02
~KM
CGR
CUY
CVF
ECM
EIF
NPM
7X8
5PM
ID FETCH-LOGICAL-c418t-fbad25fb6a12c7a15aad7723711882ea8e39debe5ec2a13a0c4d56e29453e07d3
ISSN 0027-8424
1091-6490
IngestDate Thu Aug 21 18:15:27 EDT 2025
Fri Jul 11 11:40:50 EDT 2025
Mon Jul 21 06:01:37 EDT 2025
Tue Jul 01 01:53:03 EDT 2025
Thu Apr 24 22:51:45 EDT 2025
Wed Nov 11 00:30:24 EST 2020
IsDoiOpenAccess false
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 16
Language English
LinkModel OpenURL
MergedId FETCHMERGED-LOGICAL-c418t-fbad25fb6a12c7a15aad7723711882ea8e39debe5ec2a13a0c4d56e29453e07d3
Notes SourceType-Scholarly Journals-1
ObjectType-Correspondence-1
ObjectType-Commentary-2
content type line 23
Author contributions: M.W.S., E.J.F., and J.J.S. analyzed data and wrote the paper.
OpenAccessLink https://www.pnas.org/content/pnas/111/16/E1560.full.pdf
PMID 24706907
PQID 1518813424
PQPubID 23479
ParticipantIDs proquest_miscellaneous_1518813424
pubmedcentral_primary_oai_pubmedcentral_nih_gov_4000836
pnas_primary_111_16_E1560
pubmed_primary_24706907
crossref_citationtrail_10_1073_pnas_1400941111
crossref_primary_10_1073_pnas_1400941111
ProviderPackageCode RNA
PNE
CITATION
AAYXX
PublicationCentury 2000
PublicationDate 2014-04-22
PublicationDateYYYYMMDD 2014-04-22
PublicationDate_xml – month: 04
  year: 2014
  text: 2014-04-22
  day: 22
PublicationDecade 2010
PublicationPlace United States
PublicationPlace_xml – name: United States
PublicationTitle Proceedings of the National Academy of Sciences - PNAS
PublicationTitleAlternate Proc Natl Acad Sci U S A
PublicationYear 2014
Publisher National Acad Sciences
National Academy of Sciences
Publisher_xml – name: National Acad Sciences
– name: National Academy of Sciences
References e_1_3_2_1_2
e_1_3_2_4_2
e_1_3_2_3_2
e_1_3_2_2_2
22135472 - Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):20166-71
24243955 - Proc Natl Acad Sci U S A. 2013 Dec 3;110(49):19872-7
21586637 - Proc Natl Acad Sci U S A. 2011 Jun 7;108(23):9530-5
24877228 - Proc Natl Acad Sci U S A. 2014 Apr 22;111(16):E1561
22853953 - Proc Natl Acad Sci U S A. 2012 Sep 4;109(36):14508-13
References_xml – ident: e_1_3_2_3_2
  doi: 10.1073/pnas.1110064108
– ident: e_1_3_2_4_2
  doi: 10.1073/pnas.1208715109
– ident: e_1_3_2_1_2
  doi: 10.1073/pnas.1319590110
– ident: e_1_3_2_2_2
  doi: 10.1073/pnas.1105422108
– reference: 24243955 - Proc Natl Acad Sci U S A. 2013 Dec 3;110(49):19872-7
– reference: 24877228 - Proc Natl Acad Sci U S A. 2014 Apr 22;111(16):E1561
– reference: 22135472 - Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):20166-71
– reference: 22853953 - Proc Natl Acad Sci U S A. 2012 Sep 4;109(36):14508-13
– reference: 21586637 - Proc Natl Acad Sci U S A. 2011 Jun 7;108(23):9530-5
SSID ssj0009580
Score 2.1422908
SourceID pubmedcentral
proquest
pubmed
crossref
pnas
SourceType Open Access Repository
Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage E1560
SubjectTerms Biological Sciences
Computational Biology - methods
DNA, Circular - genetics
High-Throughput Nucleotide Sequencing - methods
Letters
Research Design
Title Risks of double-counting in deep sequencing
URI http://www.pnas.org/content/111/16/E1560.extract
https://www.ncbi.nlm.nih.gov/pubmed/24706907
https://www.proquest.com/docview/1518813424
https://pubmed.ncbi.nlm.nih.gov/PMC4000836
Volume 111
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1bb5swFLay7GUv07oru4lJe-iEnMXGYPJYVZ2iSo2itdX6hgw2atSURCN52U_Yr97xBUOybtr6goIxhvgcnwv-zjkIfVR8AhfYGEtOJGZUMJwRJeEUbP1KMKpMrcOzWTq9ZKdXydVg8LOHWtpuilH54864kvtQFdqArjpK9j8o6weFBvgN9IUjUBiO_0Tjr4vmxkAx5GpbLBX2hR8MxFWtIweUbtWTM0LnXmk1LURg1n4TPOoiTNyybyIczWddveLz8vrWbSk5zH30bbSnzGwp6OjUt5-L5Y0F0zSNatvdxwZiMCq0c03_9jJ9KUtB8zEbGz1SVrCCXYJTZkuDesnr5Kxjsb4gPdER3j2t7M9_E_kgo3Sd4lo0IPU1UJK4YXsMsL41HEAZ14mZeaf7PCJxfnbMjD2aPkAPKbgcBiQ67Sdwzmw4k_tvbZooHn_ee7bOL-0etGPsDHW_uxyZfTxuz8C5eIIeO88kPLJsdoAGqn6KDtp5Dw9dgvJPz1Bk-C5cVeEe34WLOtR8F3Z89xxdfjm5OJ5iV3QDl4xkG1wVQtKkKlJBaMkFSYSQejo4eKIZVSJT8UTCyk9USQWJxbhkMkkVnbAkVmMu4xdoWK9q9QqFIq7GKZVFUlWF3p4tsiQTFYdxwQ4GMzVAo3Z28tJlpNeFUZa5QUbwONczlnczG6BDf8PaJmP5c9fAtPhu4OeSNDdsFKAPLQ1yEKZ6h0zUarWF-3V6QhIDeQP00tLEj9DSNEB8h1q-g07UvnulXlybhO2Os17f-8436FG3Gt-i4eb7Vr0DY3hTvDdc-gut9bE3
linkProvider ABC ChemistRy
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Risks+of+double-counting+in+deep+sequencing&rft.jtitle=Proceedings+of+the+National+Academy+of+Sciences+-+PNAS&rft.au=Schmitt%2C+Michael+W.&rft.au=Fox%2C+Edward+J.&rft.au=Salk%2C+Jesse+J.&rft.date=2014-04-22&rft.pub=National+Academy+of+Sciences&rft.issn=0027-8424&rft.eissn=1091-6490&rft.volume=111&rft.issue=16&rft.spage=E1560&rft.epage=E1560&rft_id=info:doi/10.1073%2Fpnas.1400941111&rft_id=info%3Apmid%2F24706907&rft.externalDocID=PMC4000836
thumbnail_m http://utb.summon.serialssolutions.com/2.0.0/image/custom?url=http%3A%2F%2Fwww.pnas.org%2Fcontent%2F111%2F16.cover.gif
thumbnail_s http://utb.summon.serialssolutions.com/2.0.0/image/custom?url=http%3A%2F%2Fwww.pnas.org%2Fcontent%2F111%2F16.cover.gif