Paired Primary and Metastatic Tumor Analysis of Somatic Mutations in Synchronous and Metachronous Colorectal Cancer
Although the mutation status of is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes. In this study, 41 genes were evaluated and the mutational profiles were compared in 46 colorectal cancer patients with paired surgical specimens of primar...
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Published in | Cancer research and treatment Vol. 49; no. 1; pp. 161 - 167 |
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Main Authors | , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
Korea (South)
Korean Cancer Association
01.01.2017
대한암학회 |
Subjects | |
Online Access | Get full text |
ISSN | 1598-2998 2005-9256 |
DOI | 10.4143/crt.2015.490 |
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Abstract | Although the mutation status of
is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes.
In this study, 41 genes were evaluated and the mutational profiles were compared in 46 colorectal cancer patients with paired surgical specimens of primary and metastatic lesions: synchronous (n=27) and metachronous (n=19) lesions. A high-throughput mass spectrometry-based genotyping platform validated by orthogonal chemistry, OncoMap v.4.4, was used to evaluate the formalin-fixed, paraffin-embedded surgical specimens. The patients' demographics, tumor characteristics, and microsatellite instability status were analyzed by a retrospective chart review.
In this study,with OncoMap, mutationswere identified in 80.4% of patientswith the following frequency:
(39.1%),
(28.3%),
(28.3%),
(6.5%),
(6.5%), and
(4.3%). Although 19.6% (9/46) of the patients showed no gene mutations, 43.5% (20/46) and 37.0% (17/46) had mutations in one and two or more genes, respectively. The synchronous and metachronous lesions showed similar mutational profiles. Paired samples between primary and metastatic tumors differed in 7.4% (2/27) and 10.5% (2/19) for synchronous and metachronous according to OncoMap.
These findings indicate the major pathway genes, including
,
,
,
,
, and
, are often concordant between the primary and metastatic lesions regardless of the temporal relationship of metastasis. |
---|---|
AbstractList | PURPOSEAlthough the mutation status of KRAS is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes.MATERIALS AND METHODSIn this study, 41 genes were evaluated and the mutational profiles were compared in 46 colorectal cancer patients with paired surgical specimens of primary and metastatic lesions: synchronous (n=27) and metachronous (n=19) lesions. A high-throughput mass spectrometry-based genotyping platform validated by orthogonal chemistry, OncoMap v.4.4, was used to evaluate the formalin-fixed, paraffin-embedded surgical specimens. The patients' demographics, tumor characteristics, and microsatellite instability status were analyzed by a retrospective chart review.RESULTSIn this study,with OncoMap, mutationswere identified in 80.4% of patientswith the following frequency: KRAS (39.1%), TP53 (28.3%), APC (28.3%), PIK3CA (6.5%), BRAF (6.5%), and NRAS (4.3%). Although 19.6% (9/46) of the patients showed no gene mutations, 43.5% (20/46) and 37.0% (17/46) had mutations in one and two or more genes, respectively. The synchronous and metachronous lesions showed similar mutational profiles. Paired samples between primary and metastatic tumors differed in 7.4% (2/27) and 10.5% (2/19) for synchronous and metachronous according to OncoMap.CONCLUSIONThese findings indicate the major pathway genes, including KRAS, TP53, APC, PIK3CA, BRAF, and NRAS, are often concordant between the primary and metastatic lesions regardless of the temporal relationship of metastasis. Purpose Although the mutation status of KRAS is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes. Materials and Methods In this study, 41 genes were evaluated and the mutational profiles were compared in 46 colorectal cancer patients with paired surgical specimens of primary and metastatic lesions: synchronous (n=27) and metachronous (n=19) lesions. A high-throughput mass spectrometry- based genotyping platform validated by orthogonal chemistry, OncoMap v.4.4, was used to evaluate the formalin-fixed, paraffin-embedded surgical specimens. The patients’ demographics, tumor characteristics, and microsatellite instability status were analyzed by a retrospective chart review. Results In this study, with OncoMap, mutations were identified in 80.4% of patients with the following frequency: KRAS (39.1%), TP53 (28.3%), APC (28.3%), PIK3CA (6.5%), BRAF (6.5%), and NRAS (4.3%). Although 19.6% (9/46) of the patients showed no gene mutations, 43.5% (20/46) and 37.0% (17/46) had mutations in one and two or more genes, respectively. The synchronous and metachronous lesions showed similar mutational profiles. Paired samples between primary and metastatic tumors differed in 7.4% (2/27) and 10.5% (2/19) for synchronous and metachronous according to OncoMap. Conclusion These findings indicate the major pathway genes, including KRAS, TP53, APC, PIK3CA, BRAF, and NRAS, are often concordant between the primary and metastatic lesions regardless of the temporal relationship of metastasis. KCI Citation Count: 0 Although the mutation status of is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes. In this study, 41 genes were evaluated and the mutational profiles were compared in 46 colorectal cancer patients with paired surgical specimens of primary and metastatic lesions: synchronous (n=27) and metachronous (n=19) lesions. A high-throughput mass spectrometry-based genotyping platform validated by orthogonal chemistry, OncoMap v.4.4, was used to evaluate the formalin-fixed, paraffin-embedded surgical specimens. The patients' demographics, tumor characteristics, and microsatellite instability status were analyzed by a retrospective chart review. In this study,with OncoMap, mutationswere identified in 80.4% of patientswith the following frequency: (39.1%), (28.3%), (28.3%), (6.5%), (6.5%), and (4.3%). Although 19.6% (9/46) of the patients showed no gene mutations, 43.5% (20/46) and 37.0% (17/46) had mutations in one and two or more genes, respectively. The synchronous and metachronous lesions showed similar mutational profiles. Paired samples between primary and metastatic tumors differed in 7.4% (2/27) and 10.5% (2/19) for synchronous and metachronous according to OncoMap. These findings indicate the major pathway genes, including , , , , , and , are often concordant between the primary and metastatic lesions regardless of the temporal relationship of metastasis. |
Author | Jang, Se Jin Yu, Chang Sik Hong, Seung-Mo Kim, Kyu-pyo Ahn, Sung-Min Kim, Jeong-Eun Chun, Sung Min Kim, Tae Won Kim, Jin Cheon Hong, Yong Sang |
Author_xml | – sequence: 1 givenname: Kyu-pyo surname: Kim fullname: Kim, Kyu-pyo – sequence: 2 givenname: Jeong-Eun surname: Kim fullname: Kim, Jeong-Eun – sequence: 3 givenname: Yong Sang surname: Hong fullname: Hong, Yong Sang – sequence: 4 givenname: Sung-Min surname: Ahn fullname: Ahn, Sung-Min – sequence: 5 givenname: Sung Min surname: Chun fullname: Chun, Sung Min – sequence: 6 givenname: Seung-Mo surname: Hong fullname: Hong, Seung-Mo – sequence: 7 givenname: Se Jin surname: Jang fullname: Jang, Se Jin – sequence: 8 givenname: Chang Sik surname: Yu fullname: Yu, Chang Sik – sequence: 9 givenname: Jin Cheon surname: Kim fullname: Kim, Jin Cheon – sequence: 10 givenname: Tae Won surname: Kim fullname: Kim, Tae Won |
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Snippet | Although the mutation status of
is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes.
In this... PURPOSEAlthough the mutation status of KRAS is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway... Purpose Although the mutation status of KRAS is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes.... |
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SubjectTerms | Biomarkers, Tumor Colorectal Neoplasms - diagnosis Colorectal Neoplasms - genetics Colorectal Neoplasms - mortality Colorectal Neoplasms - therapy Combined Modality Therapy DNA Mutational Analysis Female Genotype Genotyping Techniques Humans Loss of Heterozygosity Male Microsatellite Instability Mutation Neoplasm Grading Neoplasm Metastasis Neoplasm Staging Original ras Proteins - genetics Retrospective Studies Survival Analysis 의약학 |
Title | Paired Primary and Metastatic Tumor Analysis of Somatic Mutations in Synchronous and Metachronous Colorectal Cancer |
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