Paired Primary and Metastatic Tumor Analysis of Somatic Mutations in Synchronous and Metachronous Colorectal Cancer

Although the mutation status of is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes. In this study, 41 genes were evaluated and the mutational profiles were compared in 46 colorectal cancer patients with paired surgical specimens of primar...

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Published inCancer research and treatment Vol. 49; no. 1; pp. 161 - 167
Main Authors Kim, Kyu-pyo, Kim, Jeong-Eun, Hong, Yong Sang, Ahn, Sung-Min, Chun, Sung Min, Hong, Seung-Mo, Jang, Se Jin, Yu, Chang Sik, Kim, Jin Cheon, Kim, Tae Won
Format Journal Article
LanguageEnglish
Published Korea (South) Korean Cancer Association 01.01.2017
대한암학회
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ISSN1598-2998
2005-9256
DOI10.4143/crt.2015.490

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Abstract Although the mutation status of is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes. In this study, 41 genes were evaluated and the mutational profiles were compared in 46 colorectal cancer patients with paired surgical specimens of primary and metastatic lesions: synchronous (n=27) and metachronous (n=19) lesions. A high-throughput mass spectrometry-based genotyping platform validated by orthogonal chemistry, OncoMap v.4.4, was used to evaluate the formalin-fixed, paraffin-embedded surgical specimens. The patients' demographics, tumor characteristics, and microsatellite instability status were analyzed by a retrospective chart review. In this study,with OncoMap, mutationswere identified in 80.4% of patientswith the following frequency: (39.1%), (28.3%), (28.3%), (6.5%), (6.5%), and (4.3%). Although 19.6% (9/46) of the patients showed no gene mutations, 43.5% (20/46) and 37.0% (17/46) had mutations in one and two or more genes, respectively. The synchronous and metachronous lesions showed similar mutational profiles. Paired samples between primary and metastatic tumors differed in 7.4% (2/27) and 10.5% (2/19) for synchronous and metachronous according to OncoMap. These findings indicate the major pathway genes, including , , , , , and , are often concordant between the primary and metastatic lesions regardless of the temporal relationship of metastasis.
AbstractList PURPOSEAlthough the mutation status of KRAS is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes.MATERIALS AND METHODSIn this study, 41 genes were evaluated and the mutational profiles were compared in 46 colorectal cancer patients with paired surgical specimens of primary and metastatic lesions: synchronous (n=27) and metachronous (n=19) lesions. A high-throughput mass spectrometry-based genotyping platform validated by orthogonal chemistry, OncoMap v.4.4, was used to evaluate the formalin-fixed, paraffin-embedded surgical specimens. The patients' demographics, tumor characteristics, and microsatellite instability status were analyzed by a retrospective chart review.RESULTSIn this study,with OncoMap, mutationswere identified in 80.4% of patientswith the following frequency: KRAS (39.1%), TP53 (28.3%), APC (28.3%), PIK3CA (6.5%), BRAF (6.5%), and NRAS (4.3%). Although 19.6% (9/46) of the patients showed no gene mutations, 43.5% (20/46) and 37.0% (17/46) had mutations in one and two or more genes, respectively. The synchronous and metachronous lesions showed similar mutational profiles. Paired samples between primary and metastatic tumors differed in 7.4% (2/27) and 10.5% (2/19) for synchronous and metachronous according to OncoMap.CONCLUSIONThese findings indicate the major pathway genes, including KRAS, TP53, APC, PIK3CA, BRAF, and NRAS, are often concordant between the primary and metastatic lesions regardless of the temporal relationship of metastasis.
Purpose Although the mutation status of KRAS is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes. Materials and Methods In this study, 41 genes were evaluated and the mutational profiles were compared in 46 colorectal cancer patients with paired surgical specimens of primary and metastatic lesions: synchronous (n=27) and metachronous (n=19) lesions. A high-throughput mass spectrometry- based genotyping platform validated by orthogonal chemistry, OncoMap v.4.4, was used to evaluate the formalin-fixed, paraffin-embedded surgical specimens. The patients’ demographics, tumor characteristics, and microsatellite instability status were analyzed by a retrospective chart review. Results In this study, with OncoMap, mutations were identified in 80.4% of patients with the following frequency: KRAS (39.1%), TP53 (28.3%), APC (28.3%), PIK3CA (6.5%), BRAF (6.5%), and NRAS (4.3%). Although 19.6% (9/46) of the patients showed no gene mutations, 43.5% (20/46) and 37.0% (17/46) had mutations in one and two or more genes, respectively. The synchronous and metachronous lesions showed similar mutational profiles. Paired samples between primary and metastatic tumors differed in 7.4% (2/27) and 10.5% (2/19) for synchronous and metachronous according to OncoMap. Conclusion These findings indicate the major pathway genes, including KRAS, TP53, APC, PIK3CA, BRAF, and NRAS, are often concordant between the primary and metastatic lesions regardless of the temporal relationship of metastasis. KCI Citation Count: 0
Although the mutation status of is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes. In this study, 41 genes were evaluated and the mutational profiles were compared in 46 colorectal cancer patients with paired surgical specimens of primary and metastatic lesions: synchronous (n=27) and metachronous (n=19) lesions. A high-throughput mass spectrometry-based genotyping platform validated by orthogonal chemistry, OncoMap v.4.4, was used to evaluate the formalin-fixed, paraffin-embedded surgical specimens. The patients' demographics, tumor characteristics, and microsatellite instability status were analyzed by a retrospective chart review. In this study,with OncoMap, mutationswere identified in 80.4% of patientswith the following frequency: (39.1%), (28.3%), (28.3%), (6.5%), (6.5%), and (4.3%). Although 19.6% (9/46) of the patients showed no gene mutations, 43.5% (20/46) and 37.0% (17/46) had mutations in one and two or more genes, respectively. The synchronous and metachronous lesions showed similar mutational profiles. Paired samples between primary and metastatic tumors differed in 7.4% (2/27) and 10.5% (2/19) for synchronous and metachronous according to OncoMap. These findings indicate the major pathway genes, including , , , , , and , are often concordant between the primary and metastatic lesions regardless of the temporal relationship of metastasis.
Author Jang, Se Jin
Yu, Chang Sik
Hong, Seung-Mo
Kim, Kyu-pyo
Ahn, Sung-Min
Kim, Jeong-Eun
Chun, Sung Min
Kim, Tae Won
Kim, Jin Cheon
Hong, Yong Sang
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Issue 1
Keywords Neoplasm metastasis
Genomics
Colorectal neoplasms
Language English
License This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
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Snippet Although the mutation status of is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes. In this...
PURPOSEAlthough the mutation status of KRAS is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway...
Purpose Although the mutation status of KRAS is highly concordant in primary and metastatic lesions, it has not been generalized to other major pathway genes....
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SubjectTerms Biomarkers, Tumor
Colorectal Neoplasms - diagnosis
Colorectal Neoplasms - genetics
Colorectal Neoplasms - mortality
Colorectal Neoplasms - therapy
Combined Modality Therapy
DNA Mutational Analysis
Female
Genotype
Genotyping Techniques
Humans
Loss of Heterozygosity
Male
Microsatellite Instability
Mutation
Neoplasm Grading
Neoplasm Metastasis
Neoplasm Staging
Original
ras Proteins - genetics
Retrospective Studies
Survival Analysis
의약학
Title Paired Primary and Metastatic Tumor Analysis of Somatic Mutations in Synchronous and Metachronous Colorectal Cancer
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