Genome Sequence of an Invasive Strain of Streptococcus gordonii

We report the genome sequence of IE35, a strain of Streptococcus gordonii isolated from the blood of a patient with prosthetic valve endocarditis. Whole-genome sequencing of S. gordonii IE35 strain by the combination of Illumina HiSeq2000 paired-end, Ion Torrent single-end sequencing and gap closing...

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Bibliographic Details
Published inIndian journal of medical microbiology Vol. 35; no. 2; pp. 274 - 276
Main Authors Menon, Thangam, Naveen Kumar, V.
Format Journal Article
LanguageEnglish
Published India Elsevier B.V 01.04.2017
Elsevier Limited
Subjects
Adult
Amino acids
Bacteremia - microbiology
Deoxyribonucleic acid
Disease
DNA
Endocarditis
Gene sequencing
Genes
Genome sequence
Genome, Bacterial
Genomes
Humans
Metabolism
Molecular Sequence Annotation
Nucleotide sequence
Pathogenesis
Prostheses
Prosthesis-Related Infections - microbiology
Proteins
Ribonucleic acid
RNA
Software
Streptococcal Infections - microbiology
Streptococcus
Streptococcus gordonii
Streptococcus gordonii - genetics
Streptococcus gordonii - isolation & purification
Virulence
Whole Genome Sequencing
United States > US
Germany
India
Genome sequence
Streptococcus gordonii
Endocarditis
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Summary:We report the genome sequence of IE35, a strain of Streptococcus gordonii isolated from the blood of a patient with prosthetic valve endocarditis. Whole-genome sequencing of S. gordonii IE35 strain by the combination of Illumina HiSeq2000 paired-end, Ion Torrent single-end sequencing and gap closing by Illumina NextSeq yielded a single, circular chromosome of 2,190,105 bp. It had 2106 predicted coding sequences, of which 2014 genes encoded proteins involved in various cellular processes and 66 genes coded for RNA. The predicted RNA genes were annotated up to pathway level and genes responsible for various metabolic processes and virulence were identified.
ISSN:0255-0857
1998-3646
DOI:10.4103/ijmm.IJMM_17_60