A Scalable High-Performance I/O System for a Numerical Weather Forecast Model on the Cubed-Sphere Grid
The design and implementation of a high-performance Input/Output (I/O) library for the Korean Integrated Model (KIM, KIM-IO) is described in this paper. The KIM is a next-generation global operational model for the Korea Meteorological Administration (KMA). The horizontal discretization of KIM consi...
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Published in | Asia-Pacific journal of atmospheric sciences Vol. 54; no. Suppl 1; pp. 403 - 412 |
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Main Authors | , , |
Format | Journal Article |
Language | English |
Published |
Seoul
Korean Meteorological Society
01.06.2018
Springer Nature B.V 한국기상학회 |
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Abstract | The design and implementation of a high-performance Input/Output (I/O) library for the Korean Integrated Model (KIM, KIM-IO) is described in this paper. The KIM is a next-generation global operational model for the Korea Meteorological Administration (KMA). The horizontal discretization of KIM consists of the spectral-element method on the cubed-sphere grid. The KIM-IO is developed to be a consistent and efficient approach for input and output of essential data in this particular grid structure in a multiprocessing environment. The KIM-IO provides three main features, comprising the sequential I/O, parallel I/O, and I/O decomposition methods, and adopts user-friendly interfaces similar to the Network Common Data Form (NetCDF). The efficiency of the KIM-IO is verified using experiments to analyze the performance of its three features. The scalability is also verified by implementing the KIMIO in the KIM at a resolution of approximately 12 km using the 4th supercomputer of KMA. The experimental results show that both regular parallel I/O and sequential I/O undergo performance degradation with an increasing number of processes. However, the I/O decomposition method in the KIM-IO overcomes this degradation, leading to improvement in scalability. The results also indicate that with using the new I/O decomposition method, the KIM attains good parallel scalability up to
Ο
(100,000) cores. |
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AbstractList | The design and implementation of a high-performance Input/Output (I/O) library for the Korean Integrated Model (KIM, KIM-IO) is described in this paper. The KIM is a next-generation global operational model for the Korea Meteorological Administration (KMA). The horizontal discretization of KIM consists of the spectral-element method on the cubed-sphere grid. The KIM-IO is developed to be a consistent and efficient approach for input and output of essential data in this particular grid structure in a multiprocessing environment. The KIM-IO provides three main features, comprising the sequential I/O, parallel I/O, and I/O decomposition methods, and adopts user-friendly interfaces similar to the Network Common Data Form (NetCDF). The efficiency of the KIM-IO is verified using experiments to analyze the performance of its three features. The scalability is also verified by implementing the KIMIO in the KIM at a resolution of approximately 12 km using the 4th supercomputer of KMA. The experimental results show that both regular parallel I/O and sequential I/O undergo performance degradation with an increasing number of processes. However, the I/O decomposition method in the KIM-IO overcomes this degradation, leading to improvement in scalability. The results also indicate that with using the new I/O decomposition method, the KIM attains good parallel scalability up to Ο (100,000) cores. The design and implementation of a high-performance Input/Output (I/O) library for the Korean Integrated Model (KIM, KIM-IO) is described in this paper. The KIM is a next-generation global operational model for the Korea Meteorological Administration (KMA). The horizontal discretization of KIM consists of the spectral-element method on the cubed-sphere grid. The KIM-IO is developed to be a consistent and efficient approach for input and output of essential data in this particular grid structure in a multiprocessing environment. The KIM-IO provides three main features, comprising the sequential I/O, parallel I/O, and I/O decomposition methods, and adopts user-friendly interfaces similar to the Network Common Data Form (NetCDF). The efficiency of the KIM-IO is verified using experiments to analyze the performance of its three features. The scalability is also verified by implementing the KIMIO in the KIM at a resolution of approximately 12 km using the 4th supercomputer of KMA. The experimental results show that both regular parallel I/O and sequential I/O undergo performance degradation with an increasing number of processes. However, the I/O decomposition method in the KIM-IO overcomes this degradation, leading to improvement in scalability. The results also indicate that with using the new I/O decomposition method, the KIM attains good parallel scalability up to Ο (100,000) cores. The design and implementation of a high-performance Input/Output (I/O) library for the Korean Integrated Model (KIM, KIM-IO) is described in this paper. The KIM is a next-generation global operational model for the Korea Meteorological Administration (KMA). The horizontal discretization of KIM consists of the spectral-element method on the cubed-sphere grid. The KIM-IO is developed to be a consistent and efficient approach for input and output of essential data in this particular grid structure in a multiprocessing environment. The KIM-IO provides three main features, comprising the sequential I/O, parallel I/O, and I/O decomposition methods, and adopts user-friendly interfaces similar to the Network Common Data Form (NetCDF). The efficiency of the KIM-IO is verified using experiments to analyze the performance of its three features. The scalability is also verified by implementing the KIMIO in the KIM at a resolution of approximately 12 km using the 4th supercomputer of KMA. The experimental results show that both regular parallel I/O and sequential I/O undergo performance degradation with an increasing number of processes. However, the I/O decomposition method in the KIM-IO overcomes this degradation, leading to improvement in scalability. The results also indicate that with using the new I/O decomposition method, the KIM attains good parallel scalability up to Ο (100,000) cores. KCI Citation Count: 4 |
Author | Kim, Tae-Hun Kwon, Young Cheol Kim, Junghan |
Author_xml | – sequence: 1 givenname: Junghan surname: Kim fullname: Kim, Junghan email: blue79kjh@gmail.com organization: Korea Institute of Atmospheric Prediction Systems (KIAPS), Korea Institute of Atmospheric Prediction Systems – sequence: 2 givenname: Young Cheol surname: Kwon fullname: Kwon, Young Cheol organization: Korea Institute of Atmospheric Prediction Systems (KIAPS) – sequence: 3 givenname: Tae-Hun surname: Kim fullname: Kim, Tae-Hun organization: Korea Institute of Atmospheric Prediction Systems (KIAPS) |
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Cites_doi | 10.1016/j.cpc.2012.01.016 10.1007/978-1-4612-0871-6 10.1007/978-1-4613-1401-1_5 10.1177/109434200101500208 10.1088/1742-6596/125/1/012023 10.1109/38.56302 10.1016/0167-8191(96)00024-5 10.1002/qj.49712253209 10.1016/j.jcp.2010.04.008 10.1177/1094342008090914 10.1145/125826.126133 10.1177/1094342011428142 10.1006/jcph.1996.5554 10.1256/qj.04.101 10.5194/gmd-7-93-2014 10.1177/1094342011428143 10.1175/MWR-D-13-00016.1 10.1175/1520-0493(1972)100<0136:CFAOTP>2.3.CO;2 10.1016/S0167-8191(97)00007-0 10.1007/s13143-016-0005-0 10.1177/109434209801200401 10.1175/MWR2890.1 10.1007/s13143-018-0028-9 |
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SubjectTerms | Atmospheric Sciences Climatology Decomposition Degradation Earth and Environmental Science Earth Sciences Geophysics/Geodesy Interfaces Methods Numerical forecasting models Weather forecasting 대기과학 |
Title | A Scalable High-Performance I/O System for a Numerical Weather Forecast Model on the Cubed-Sphere Grid |
URI | https://link.springer.com/article/10.1007/s13143-018-0021-3 https://www.proquest.com/docview/2069813061 https://www.kci.go.kr/kciportal/ci/sereArticleSearch/ciSereArtiView.kci?sereArticleSearchBean.artiId=ART002365024 |
Volume | 54 |
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ispartofPNX | 한국기상학회지, 2018, 54(0), , pp.403-412 |
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