ILF3 contributes to the establishment of the antiviral type I interferon program
Abstract Upon detection of viral infections, cells activate the expression of type I interferons (IFNs) and pro-inflammatory cytokines to control viral dissemination. As part of their antiviral response, cells also trigger the translational shutoff response which prevents translation of viral mRNAs...
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Published in | Nucleic acids research Vol. 48; no. 1; pp. 116 - 129 |
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Main Authors | , , |
Format | Journal Article |
Language | English |
Published |
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Oxford University Press
10.01.2020
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Abstract | Abstract
Upon detection of viral infections, cells activate the expression of type I interferons (IFNs) and pro-inflammatory cytokines to control viral dissemination. As part of their antiviral response, cells also trigger the translational shutoff response which prevents translation of viral mRNAs and cellular mRNAs in a non-selective manner. Intriguingly, mRNAs encoding for antiviral factors bypass this translational shutoff, suggesting the presence of additional regulatory mechanisms enabling expression of the self-defence genes. Here, we identified the dsRNA binding protein ILF3 as an essential host factor required for efficient translation of the central antiviral cytokine, IFNB1, and a subset of interferon-stimulated genes. By combining polysome profiling and next-generation sequencing, ILF3 was also found to be necessary to establish the dsRNA-induced transcriptional and translational programs. We propose a central role for the host factor ILF3 in enhancing expression of the antiviral defence mRNAs in cellular conditions where cap-dependent translation is compromised. |
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AbstractList | Abstract
Upon detection of viral infections, cells activate the expression of type I interferons (IFNs) and pro-inflammatory cytokines to control viral dissemination. As part of their antiviral response, cells also trigger the translational shutoff response which prevents translation of viral mRNAs and cellular mRNAs in a non-selective manner. Intriguingly, mRNAs encoding for antiviral factors bypass this translational shutoff, suggesting the presence of additional regulatory mechanisms enabling expression of the self-defence genes. Here, we identified the dsRNA binding protein ILF3 as an essential host factor required for efficient translation of the central antiviral cytokine, IFNB1, and a subset of interferon-stimulated genes. By combining polysome profiling and next-generation sequencing, ILF3 was also found to be necessary to establish the dsRNA-induced transcriptional and translational programs. We propose a central role for the host factor ILF3 in enhancing expression of the antiviral defence mRNAs in cellular conditions where cap-dependent translation is compromised. Upon detection of viral infections, cells activate the expression of type I interferons (IFNs) and pro-inflammatory cytokines to control viral dissemination. As part of their antiviral response, cells also trigger the translational shutoff response which prevents translation of viral mRNAs and cellular mRNAs in a non-selective manner. Intriguingly, mRNAs encoding for antiviral factors bypass this translational shutoff, suggesting the presence of additional regulatory mechanisms enabling expression of the self-defence genes. Here, we identified the dsRNA binding protein ILF3 as an essential host factor required for efficient translation of the central antiviral cytokine, IFNB1, and a subset of interferon-stimulated genes. By combining polysome profiling and next-generation sequencing, ILF3 was also found to be necessary to establish the dsRNA-induced transcriptional and translational programs. We propose a central role for the host factor ILF3 in enhancing expression of the antiviral defence mRNAs in cellular conditions where cap-dependent translation is compromised. Upon detection of viral infections, cells activate the expression of type I interferons (IFNs) and pro-inflammatory cytokines to control viral dissemination. As part of their antiviral response, cells also trigger the translational shutoff response which prevents translation of viral mRNAs and cellular mRNAs in a non-selective manner. Intriguingly, mRNAs encoding for antiviral factors bypass this translational shutoff, suggesting the presence of additional regulatory mechanisms enabling expression of the self-defence genes. Here, we identified the dsRNA binding protein ILF3 as an essential host factor required for efficient translation of the central antiviral cytokine, IFNB1 , and a subset of interferon-stimulated genes. By combining polysome profiling and next-generation sequencing, ILF3 was also found to be necessary to establish the dsRNA-induced transcriptional and translational programs. We propose a central role for the host factor ILF3 in enhancing expression of the antiviral defence mRNAs in cellular conditions where cap-dependent translation is compromised. |
Author | Bellora, Nicolas Macias, Sara Watson, Samir F |
AuthorAffiliation | 1 Institute of Immunology and Infection Research, School of Biological Sciences, University of Edinburgh , King's Buildings, Edinburgh, UK 2 IPATEC, CONICET , Bariloche, Argentina |
AuthorAffiliation_xml | – name: 1 Institute of Immunology and Infection Research, School of Biological Sciences, University of Edinburgh , King's Buildings, Edinburgh, UK – name: 2 IPATEC, CONICET , Bariloche, Argentina |
Author_xml | – sequence: 1 givenname: Samir F orcidid: 0000-0001-5073-2910 surname: Watson fullname: Watson, Samir F organization: Institute of Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, King's Buildings, Edinburgh, UK – sequence: 2 givenname: Nicolas orcidid: 0000-0001-6637-3465 surname: Bellora fullname: Bellora, Nicolas organization: IPATEC, CONICET, Bariloche, Argentina – sequence: 3 givenname: Sara orcidid: 0000-0002-0643-3494 surname: Macias fullname: Macias, Sara email: sara.maciasribela@ed.ac.uk organization: Institute of Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, King's Buildings, Edinburgh, UK |
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Upon detection of viral infections, cells activate the expression of type I interferons (IFNs) and pro-inflammatory cytokines to control viral... Upon detection of viral infections, cells activate the expression of type I interferons (IFNs) and pro-inflammatory cytokines to control viral dissemination.... |
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SubjectTerms | A549 Cells Apoptosis Regulatory Proteins - genetics Apoptosis Regulatory Proteins - immunology Chemokine CCL5 - genetics Chemokine CCL5 - immunology Chemokine CXCL10 - genetics Chemokine CXCL10 - immunology Cytokines - genetics Cytokines - immunology DEAD Box Protein 58 - genetics DEAD Box Protein 58 - immunology Gene Expression Regulation Gene regulation, Chromatin and Epigenetics HeLa Cells Host-Pathogen Interactions - genetics Host-Pathogen Interactions - immunology Humans Interferon-beta - genetics Interferon-beta - immunology Intracellular Signaling Peptides and Proteins - genetics Intracellular Signaling Peptides and Proteins - immunology Nuclear Factor 90 Proteins - genetics Nuclear Factor 90 Proteins - immunology Poly I-C - pharmacology Polyribosomes - drug effects Polyribosomes - genetics Polyribosomes - immunology Protein Biosynthesis Receptors, Immunologic RNA, Double-Stranded - antagonists & inhibitors RNA, Double-Stranded - genetics RNA, Double-Stranded - metabolism RNA, Messenger - genetics RNA, Messenger - immunology RNA, Viral - antagonists & inhibitors RNA, Viral - genetics RNA, Viral - metabolism RNA-Binding Proteins - genetics RNA-Binding Proteins - immunology Signal Transduction Ubiquitins - genetics Ubiquitins - immunology Virus Replication |
Title | ILF3 contributes to the establishment of the antiviral type I interferon program |
URI | https://www.ncbi.nlm.nih.gov/pubmed/31701124 https://pubmed.ncbi.nlm.nih.gov/PMC7145544 |
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