Fiber alignment in 3D collagen networks as a biophysical marker for cell contractility
Cells cultured in 3D fibrous biopolymer matrices exert traction forces on their environment that induce deformations and remodeling of the fiber network. By measuring these deformations, the traction forces can be reconstructed if the mechanical properties of the matrix and the force-free matrix con...
Saved in:
Published in | Matrix biology Vol. 124; pp. 39 - 48 |
---|---|
Main Authors | , , , , , , , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
Netherlands
01.12.2023
|
Subjects | |
Online Access | Get full text |
Cover
Loading…
Abstract | Cells cultured in 3D fibrous biopolymer matrices exert traction forces on their environment that induce deformations and remodeling of the fiber network. By measuring these deformations, the traction forces can be reconstructed if the mechanical properties of the matrix and the force-free matrix configuration are known. These requirements limit the applicability of traction force reconstruction in practice. In this study, we test whether force-induced matrix remodeling can instead be used as a proxy for cellular traction forces. We measure the traction forces of hepatic stellate cells and different glioblastoma cell lines and quantify matrix remodeling by measuring the fiber orientation and fiber density around these cells. In agreement with simulated fiber networks, we demonstrate that changes in local fiber orientation and density are directly related to cell forces. By resolving Rho-kinase (ROCK) inhibitor-induced changes of traction forces, fiber alignment, and fiber density in hepatic stellate cells, we show that the method is suitable for drug screening assays. We conclude that differences in local fiber orientation and density, which are easily measurable, can be used as a qualitative proxy for changes in traction forces. The method is available as an open-source Python package with a graphical user interface. |
---|---|
AbstractList | Cells cultured in 3D fibrous biopolymer matrices exert traction forces on their environment that induce deformations and remodeling of the fiber network. By measuring these deformations, the traction forces can be reconstructed if the mechanical properties of the matrix and the force-free matrix configuration are known. These requirements limit the applicability of traction force reconstruction in practice. In this study, we test whether force-induced matrix remodeling can instead be used as a proxy for cellular traction forces. We measure the traction forces of hepatic stellate cells and different glioblastoma cell lines and quantify matrix remodeling by measuring the fiber orientation and fiber density around these cells. In agreement with simulated fiber networks, we demonstrate that changes in local fiber orientation and density are directly related to cell forces. By resolving Rho-kinase (ROCK) inhibitor-induced changes of traction forces, fiber alignment, and fiber density in hepatic stellate cells, we show that the method is suitable for drug screening assays. We conclude that differences in local fiber orientation and density, which are easily measurable, can be used as a qualitative proxy for changes in traction forces. The method is available as an open-source Python package with a graphical user interface.Cells cultured in 3D fibrous biopolymer matrices exert traction forces on their environment that induce deformations and remodeling of the fiber network. By measuring these deformations, the traction forces can be reconstructed if the mechanical properties of the matrix and the force-free matrix configuration are known. These requirements limit the applicability of traction force reconstruction in practice. In this study, we test whether force-induced matrix remodeling can instead be used as a proxy for cellular traction forces. We measure the traction forces of hepatic stellate cells and different glioblastoma cell lines and quantify matrix remodeling by measuring the fiber orientation and fiber density around these cells. In agreement with simulated fiber networks, we demonstrate that changes in local fiber orientation and density are directly related to cell forces. By resolving Rho-kinase (ROCK) inhibitor-induced changes of traction forces, fiber alignment, and fiber density in hepatic stellate cells, we show that the method is suitable for drug screening assays. We conclude that differences in local fiber orientation and density, which are easily measurable, can be used as a qualitative proxy for changes in traction forces. The method is available as an open-source Python package with a graphical user interface. Cells cultured in 3D fibrous biopolymer matrices exert traction forces on their environment that induce deformations and remodeling of the fiber network. By measuring these deformations, the traction forces can be reconstructed if the mechanical properties of the matrix and the force-free matrix configuration are known. These requirements limit the applicability of traction force reconstruction in practice. In this study, we test whether force-induced matrix remodeling can instead be used as a proxy for cellular traction forces. We measure the traction forces of hepatic stellate cells and different glioblastoma cell lines and quantify matrix remodeling by measuring the fiber orientation and fiber density around these cells. In agreement with simulated fiber networks, we demonstrate that changes in local fiber orientation and density are directly related to cell forces. By resolving Rho-kinase (ROCK) inhibitor-induced changes of traction forces, fiber alignment, and fiber density in hepatic stellate cells, we show that the method is suitable for drug screening assays. We conclude that differences in local fiber orientation and density, which are easily measurable, can be used as a qualitative proxy for changes in traction forces. The method is available as an open-source Python package with a graphical user interface. Cells cultured in 3D fibrous biopolymer matrices exert traction forces on their environment that induce deformations and remodeling of the fiber network. By measuring these deformations, the traction forces can be reconstructed if the mechanical properties of the matrix and the force-free matrix configuration are known. These requirements severely limit the applicability of traction force reconstruction in practice. In this study, we test whether force-induced matrix remodeling can instead be used as a proxy for cellular traction forces. We measure the traction forces of hepatic stellate cells and different glioblastoma cell lines and quantify matrix remodeling by measuring the fiber orientation and fiber density around these cells. In agreement with simulated fiber networks, we demonstrate that changes in local fiber orientation and density are directly related to cell forces. By resolving Rho-kinase (ROCK) Inhibitor-induced changes of traction forces and fiber alignment and density in hepatic stellate cells, we show that the method is suitable for drug screening assays. We conclude that differences in local fiber orientation and density, which are easily measurable, can be used as a qualitative proxy for changes in traction forces. The method is available as an open-source Python package with a graphical user interface. |
Author | Görlach, Ekkehard Strick, Reiner Gerum, Richard Strissel, Pamela L Malandrino, Andrea Moravec, Ivana Mark, Christoph Bauer, Andreas Budday, Silvia O'Neill, Geraldine M Grundy, Thomas J Fabry, Ben Böhringer, David Bischof, Lars Rausch, Martin Mak, Michael Kah, Delf |
AuthorAffiliation | 4 Department of Mechanical Engineering, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany 8 Department of Physics and Astronomy, York University, Toronto, Canada 1 Department of Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany 2 Novartis Institutes for BioMedical Research, Basel, Switzerland 5 Department of Gynecology and Obstetrics, University Hospital Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany 6 Department of Pathology, University Hospital Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany 7 Department of Materials Science and Engineering, Universitat Politècnica de Catalunya, Barcelona, Spain 3 Children’s Cancer Research Unit, The Children’s Hospital at Westmead, University of Sydney, Australia 9 Department of Biomedical Engineering, Yale University, New Haven, USA |
AuthorAffiliation_xml | – sequence: 0 name: 6 Department of Pathology, University Hospital Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany – sequence: 0 name: 7 Department of Materials Science and Engineering, Universitat Politècnica de Catalunya, Barcelona, Spain – sequence: 0 name: 8 Department of Physics and Astronomy, York University, Toronto, Canada – sequence: 0 name: 1 Department of Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany – sequence: 0 name: 2 Novartis Institutes for BioMedical Research, Basel, Switzerland – sequence: 0 name: 3 Children’s Cancer Research Unit, The Children’s Hospital at Westmead, University of Sydney, Australia – sequence: 0 name: 4 Department of Mechanical Engineering, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany – sequence: 0 name: 5 Department of Gynecology and Obstetrics, University Hospital Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany – sequence: 0 name: 9 Department of Biomedical Engineering, Yale University, New Haven, USA |
Author_xml | – sequence: 1 givenname: David surname: Böhringer fullname: Böhringer, David email: david.boehringer@fau.de organization: Department of Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany; Novartis Institutes for BioMedical Research, Basel, Switzerland. Electronic address: david.boehringer@fau.de – sequence: 2 givenname: Andreas surname: Bauer fullname: Bauer, Andreas organization: Department of Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany – sequence: 3 givenname: Ivana surname: Moravec fullname: Moravec, Ivana organization: Novartis Institutes for BioMedical Research, Basel, Switzerland – sequence: 4 givenname: Lars surname: Bischof fullname: Bischof, Lars organization: Department of Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany – sequence: 5 givenname: Delf surname: Kah fullname: Kah, Delf organization: Department of Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany – sequence: 6 givenname: Christoph surname: Mark fullname: Mark, Christoph organization: Department of Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany – sequence: 7 givenname: Thomas J surname: Grundy fullname: Grundy, Thomas J organization: Children's Cancer Research Unit, The Children's Hospital at Westmead, University of Sydney, Australia – sequence: 8 givenname: Ekkehard surname: Görlach fullname: Görlach, Ekkehard organization: Novartis Institutes for BioMedical Research, Basel, Switzerland – sequence: 9 givenname: Geraldine M surname: O'Neill fullname: O'Neill, Geraldine M organization: Children's Cancer Research Unit, The Children's Hospital at Westmead, University of Sydney, Australia – sequence: 10 givenname: Silvia surname: Budday fullname: Budday, Silvia organization: Department of Mechanical Engineering, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany – sequence: 11 givenname: Pamela L surname: Strissel fullname: Strissel, Pamela L organization: Department of Gynecology and Obstetrics, University Hospital Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany; Department of Pathology, University Hospital Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany – sequence: 12 givenname: Reiner surname: Strick fullname: Strick, Reiner organization: Department of Gynecology and Obstetrics, University Hospital Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany – sequence: 13 givenname: Andrea surname: Malandrino fullname: Malandrino, Andrea organization: Department of Materials Science and Engineering, Universitat Politécnica de Catalunya, Barcelona, Spain – sequence: 14 givenname: Richard surname: Gerum fullname: Gerum, Richard organization: Department of Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany; Department of Physics and Astronomy, York University, Toronto, Canada – sequence: 15 givenname: Michael surname: Mak fullname: Mak, Michael email: michael.mak@yale.edu organization: Department of Biomedical Engineering, Yale University, New Haven, USA. Electronic address: michael.mak@yale.edu – sequence: 16 givenname: Martin surname: Rausch fullname: Rausch, Martin organization: Novartis Institutes for BioMedical Research, Basel, Switzerland – sequence: 17 givenname: Ben surname: Fabry fullname: Fabry, Ben email: ben.fabry@fau.de organization: Department of Physics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany. Electronic address: ben.fabry@fau.de |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/37967726$$D View this record in MEDLINE/PubMed |
BookMark | eNpVkUtv3CAUhVGVqJlM-w-qimU3dnjZmFVVpXlJkbJJou4QxjDDBMMUPI3m3wdr0iiRkFhwvnPP5ZyCoxCDAeAbRjVGuD3b1KOaehdrggitMa4RYp_AAjetqHCHyBFYIMGaCjX0zwk4zXmDioLx7jM4oVy0nJN2AR4vXW8SVN6twmjCBF2A9DfU0Xu1MgEGMz3H9JShKgeWcdv1PjutPBxVeiqkjQlq431BwpSUnpx30_4LOLbKZ_P19V6Ch8uL-_Pr6vbu6ub8122lGRJTxRtKVYsH3VsxCM6t4UODqdWKDYgPxiLSmkF1mDGthdWENd2AOacWtX0h6RL8PPhud_1oBm3mDF5ukyvx9jIqJz--BLeWq_hPYtRxIhgpDj9eHVL8uzN5kqPL80IqmLjLknQC8YZjMUvZQapTzDkZ-zYHIzl3Ijfy0ImcO5EYy_LjBfv-PuMb9L8E-gLQq44X |
CitedBy_id | crossref_primary_10_1016_j_isci_2024_109950 crossref_primary_10_1016_j_ceb_2024_102341 crossref_primary_10_1016_j_actbio_2024_03_028 crossref_primary_10_3390_ijms25116198 |
Cites_doi | 10.2147/CCID.S50046 10.1126/science.6987736 10.1016/S0168-8278(01)00169-6 10.1038/nn.4394 10.21105/joss.01989 10.7554/eLife.51912 10.1007/978-3-319-28549-8_3 10.1371/journal.pcbi.1006684 10.1371/journal.pone.0017833 10.1371/journal.pone.0036575 10.1161/STROKEAHA.108.528091 10.1007/s43152-021-00030-3 10.1146/annurev-cellbio-111315-125150 10.1016/j.jtv.2009.11.004 10.1007/3-540-57418-2 10.1038/s41467-020-18794-x 10.1073/pnas.76.3.1274 10.1111/j.1582-4934.2008.00552.x 10.1039/C7SM00561J 10.1016/j.semcdb.2017.07.041 10.1042/bj2850367 10.1109/TSMC.1979.4310076 10.1038/nmeth.3685 10.1007/s10237-011-0325-z 10.1016/j.bpj.2019.12.014 10.1007/s11538-016-0242-5 10.1529/biophysj.107.113670 10.1073/pnas.1504258112 10.1111/nan.12784 10.4103/2153-3539.139707 10.1038/nature01599 10.1038/onc.2009.299 10.1038/ncb2269 10.3390/bioengineering8020017 10.1016/j.bpj.2013.09.038 10.1038/290249a0 10.1038/nmat3025 10.1016/j.imavis.2005.09.010 10.1016/j.csbj.2020.11.038 10.3390/cancers5020357 10.1055/s-0039-3399502 10.1089/ten.teb.2014.0086 10.1073/pnas.1610347113 10.1073/pnas.1617037114 10.1038/s41598-022-19175-8 10.1038/s41598-019-41277-z 10.1016/j.bpj.2014.08.029 10.1186/1741-7015-4-38 10.1136/gutjnl-2021-325520 10.1186/1741-7015-6-11 |
ContentType | Journal Article |
Copyright | Copyright © 2023 Elsevier B.V. All rights reserved. |
Copyright_xml | – notice: Copyright © 2023 Elsevier B.V. All rights reserved. |
DBID | CGR CUY CVF ECM EIF NPM AAYXX CITATION 7X8 5PM |
DOI | 10.1016/j.matbio.2023.11.004 |
DatabaseName | Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed CrossRef MEDLINE - Academic PubMed Central (Full Participant titles) |
DatabaseTitle | MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) CrossRef MEDLINE - Academic |
DatabaseTitleList | MEDLINE - Academic MEDLINE |
Database_xml | – sequence: 1 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 2 dbid: EIF name: MEDLINE url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search sourceTypes: Index Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Medicine Anatomy & Physiology |
EISSN | 1569-1802 |
EndPage | 48 |
ExternalDocumentID | 10_1016_j_matbio_2023_11_004 37967726 |
Genre | Journal Article |
GrantInformation_xml | – fundername: NIGMS NIH HHS sequence: 0 grantid: R35 GM142875 – fundername: NHLBI NIH HHS sequence: 0 grantid: P01 HL120839 |
GroupedDBID | --- --K --M .GJ .~1 0R~ 0SF 1B1 1RT 1~. 1~5 29M 4.4 457 4G. 53G 5GY 5VS 7-5 71M 8P~ 9JM AACTN AAEDT AAEDW AAIKJ AAKOC AALRI AAOAW AAQFI AAQXK AAXKI AAXUO ABFNM ABFRF ABGSF ABJNI ABMAC ABUDA ABXDB ACDAQ ACGFO ACGFS ACIUM ACRLP ACRPL ADBBV ADEZE ADMUD ADNMO ADUVX ADVLN AEBSH AEFWE AEHWI AEKER AENEX AFJKZ AFKWA AFTJW AFXIZ AGHFR AGRDE AGUBO AGYEJ AHHHB AIEXJ AIKHN AITUG AJOXV AKRWK ALMA_UNASSIGNED_HOLDINGS AMFUW AMRAJ ASPBG AVWKF AXJTR AZFZN BKOJK BLXMC CGR CS3 CUY CVF EBS ECM EFJIC EIF EJD EO8 EO9 EP2 EP3 F5P FDB FEDTE FGOYB FIRID FNPLU FYGXN G-2 G-Q GBLVA HLW HVGLF HZ~ IHE J1W KOM LX3 M41 MO0 N9A NCXOZ NPM O-L O9- OAUVE OZT P-8 P-9 PC. Q38 R2- RIG ROL RPZ SBG SDF SDG SDP SES SEW SPCBC SSU SSZ T5K UNMZH WUQ ~G- AAYXX CITATION 7X8 5PM |
ID | FETCH-LOGICAL-c409t-7533a61dcbf9d977fe7d513fca4d07def026eda8144cc9fc2458d1773f06b3a63 |
ISSN | 0945-053X 1569-1802 |
IngestDate | Thu Dec 05 06:40:12 EST 2024 Thu Dec 05 17:54:49 EST 2024 Fri Dec 06 00:38:17 EST 2024 Thu Dec 05 16:37:22 EST 2024 |
IsDoiOpenAccess | false |
IsOpenAccess | true |
IsPeerReviewed | true |
IsScholarly | true |
Keywords | Fiber Orientation Biopolymer Networks Mechanobiology Traction Force Microscopy |
Language | English |
License | Copyright © 2023 Elsevier B.V. All rights reserved. |
LinkModel | OpenURL |
MergedId | FETCHMERGED-LOGICAL-c409t-7533a61dcbf9d977fe7d513fca4d07def026eda8144cc9fc2458d1773f06b3a63 |
Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 Author contribution. AB, DB, MR, EG and BF developed the analysis method. AB, RG and DB developed the fiber analysis software. MM performed the fiber network simulations. IM, LB and DB and performed HSC single cell experiments. AM conducted fibrin experiments. CM, GO and TG conducted and analyzed the glioblastoma traction force experiments. SB and DB conducted the rheological measurements. RS and PS established the primary CAF cell lines. DB conducted spheroid experiments. DB conducted the data analysis. DB and DK created figures and tables. BF and DB wrote the manuscript. |
OpenAccessLink | https://www.sciencedirect.com/science/article/am/pii/S0945053X23001166 |
PMID | 37967726 |
PQID | 2890757192 |
PQPubID | 23479 |
PageCount | 10 |
ParticipantIDs | pubmedcentral_primary_oai_pubmedcentral_nih_gov_10872942 proquest_miscellaneous_2890757192 crossref_primary_10_1016_j_matbio_2023_11_004 pubmed_primary_37967726 |
PublicationCentury | 2000 |
PublicationDate | 2023-12-01 |
PublicationDateYYYYMMDD | 2023-12-01 |
PublicationDate_xml | – month: 12 year: 2023 text: 2023-12-01 day: 01 |
PublicationDecade | 2020 |
PublicationPlace | Netherlands |
PublicationPlace_xml | – name: Netherlands |
PublicationTitle | Matrix biology |
PublicationTitleAlternate | Matrix Biol |
PublicationYear | 2023 |
References | Burkel (10.1016/j.matbio.2023.11.004_bib0040) 2017 Knutsson (10.1016/j.matbio.2023.11.004_bib0030) 2011 Song (10.1016/j.matbio.2023.11.004_bib0053) 2017; 71 Grundy (10.1016/j.matbio.2023.11.004_bib0056) 2016; 6 Li (10.1016/j.matbio.2023.11.004_bib0010) 2011 Murata (10.1016/j.matbio.2023.11.004_bib0041) 2001; 35 Dembo (10.1016/j.matbio.2023.11.004_bib0020) 1999 Bigun (10.1016/j.matbio.2023.11.004_bib0031) 1987 Koser (10.1016/j.matbio.2023.11.004_bib0006) 2016 Steinwachs (10.1016/j.matbio.2023.11.004_bib0025) 2016 10.1016/j.matbio.2023.11.004_bib0011 10.1016/j.matbio.2023.11.004_bib0055 Provenzano (10.1016/j.matbio.2023.11.004_bib0046) 2008; 6 Ahmadzadeh (10.1016/j.matbio.2023.11.004_bib0026) 2017; 114 10.1016/j.matbio.2023.11.004_bib0014 Humphries (10.1016/j.matbio.2023.11.004_bib0049) 2017; 79 Butler (10.1016/j.matbio.2023.11.004_bib0021) 2002 Winkler (10.1016/j.matbio.2023.11.004_bib0015) 2020; 11 Pérez-González (10.1016/j.matbio.2023.11.004_bib0007) 2020 Tambe (10.1016/j.matbio.2023.11.004_bib0008) 2011; 10 Gerum (10.1016/j.matbio.2023.11.004_bib0065) 2020; 5 Szulczewski (10.1016/j.matbio.2023.11.004_bib0051) 2020 Scholey (10.1016/j.matbio.2023.11.004_bib0004) 2003; 422 Martínez-Sánchez (10.1016/j.matbio.2023.11.004_sbref0011) 2023; 72 Mark (10.1016/j.matbio.2023.11.004_bib0038) 2020; 9 Antoine (10.1016/j.matbio.2023.11.004_bib0048) 2014; 20 Otsu (10.1016/j.matbio.2023.11.004_bib0057) 1979; 9 Mak (10.1016/j.matbio.2023.11.004_bib0060) 2020; 18 Malandrino (10.1016/j.matbio.2023.11.004_bib0059) 2019; 15 Eliceiri (10.1016/j.matbio.2023.11.004_bib0044) 2014; 5 Harris (10.1016/j.matbio.2023.11.004_bib0018) 1981 Püspöki (10.1016/j.matbio.2023.11.004_bib0033) 2016; 219 Nahum (10.1016/j.matbio.2023.11.004_sbref0046) 2020 Kawada (10.1016/j.matbio.2023.11.004_bib0019) 1992; 285 Sabass (10.1016/j.matbio.2023.11.004_bib0022) 2008; 94 Rausch (10.1016/j.matbio.2023.11.004_bib0002) 2020; 118 Raghuraman (10.1016/j.matbio.2023.11.004_sbref0009) 2021 Grundy (10.1016/j.matbio.2023.11.004_bib0037) 2022; 12 Kim (10.1016/j.matbio.2023.11.004_bib0003) 2008; 12 Böhringer (10.1016/j.matbio.2023.11.004_bib0029) 2023 Przybyla (10.1016/j.matbio.2023.11.004_bib0016) 2016; 32 Fonck (10.1016/j.matbio.2023.11.004_bib0034) 2009; 40 Jähne (10.1016/j.matbio.2023.11.004_bib0032) 1993 Nahum (10.1016/j.matbio.2023.11.004_sbref0050) 2022 Han (10.1016/j.matbio.2023.11.004_bib0047) 2016; 113 Kang (10.1016/j.matbio.2023.11.004_bib0052) 2020; 40 Harris (10.1016/j.matbio.2023.11.004_bib0017) 1980 Franck (10.1016/j.matbio.2023.11.004_bib0024) 2011; 6 Krauss (10.1016/j.matbio.2023.11.004_bib0064) 2012; 7 10.1016/j.matbio.2023.11.004_bib0028 Provenzano (10.1016/j.matbio.2023.11.004_bib0045) 2006; 4 Lang (10.1016/j.matbio.2023.11.004_bib0063) 2013; 105 Provenzano (10.1016/j.matbio.2023.11.004_bib0013) 2009; 28 Fink (10.1016/j.matbio.2023.11.004_bib0005) 2011; 13 10.1016/j.matbio.2023.11.004_bib0066 Besnerais (10.1016/j.matbio.2023.11.004_bib0042) 2005; 1 Brox (10.1016/j.matbio.2023.11.004_bib0058) 2006; 24 10.1016/j.matbio.2023.11.004_bib0023 Stringer (10.1016/j.matbio.2023.11.004_bib0039) 2019; 9 Rezakhaniha (10.1016/j.matbio.2023.11.004_bib0035) 2012; 11 Day (10.1016/j.matbio.2023.11.004_bib0036) 2013; 5 10.1016/j.matbio.2023.11.004_bib0062 Spörrer (10.1016/j.matbio.2023.11.004_bib0001) 2022; 48 Abhilash (10.1016/j.matbio.2023.11.004_bib0027) 2014; 107 Ouellette (10.1016/j.matbio.2023.11.004_bib0043) 2021; 8 |
References_xml | – start-page: 441311 year: 2021 ident: 10.1016/j.matbio.2023.11.004_sbref0009 article-title: Pressure drives rapid burst-like collective migration from 3D cancer aggregates publication-title: bioRxiv contributor: fullname: Raghuraman – start-page: 223149 year: 2022 ident: 10.1016/j.matbio.2023.11.004_sbref0050 article-title: Inference of long-range cell-cell mechanical communication from ECM remodeling fluctuations publication-title: bioRxiv contributor: fullname: Nahum – ident: 10.1016/j.matbio.2023.11.004_bib0011 doi: 10.2147/CCID.S50046 – volume: 1 start-page: 134 year: 2005 ident: 10.1016/j.matbio.2023.11.004_bib0042 article-title: Dense optical flow by iterative local window registration publication-title: Proceedings - Int. Conf. Image Process., ICIP contributor: fullname: Besnerais – year: 1980 ident: 10.1016/j.matbio.2023.11.004_bib0017 article-title: Silicone rubber substrata: a new wrinkle in the study of cell locomotion publication-title: Science doi: 10.1126/science.6987736 contributor: fullname: Harris – volume: 35 start-page: 474 issue: 4 year: 2001 ident: 10.1016/j.matbio.2023.11.004_bib0041 article-title: Inhibitory effect of Y-27632, a ROCK inhibitor, on progression of rat liver fibrosis in association with inactivation of hepatic stellate cells publication-title: J. Hepatol. doi: 10.1016/S0168-8278(01)00169-6 contributor: fullname: Murata – year: 2016 ident: 10.1016/j.matbio.2023.11.004_bib0006 article-title: Mechanosensing is critical for axon growth in the developing brain publication-title: Nat. Neurosci. doi: 10.1038/nn.4394 contributor: fullname: Koser – year: 1987 ident: 10.1016/j.matbio.2023.11.004_bib0031 article-title: Optimal orientation detection of linear symmetry contributor: fullname: Bigun – volume: 5 start-page: 1989 issue: 51 year: 2020 ident: 10.1016/j.matbio.2023.11.004_bib0065 article-title: Pylustrator: code generation for reproducible figures for publication publication-title: J. Open Source Softw. doi: 10.21105/joss.01989 contributor: fullname: Gerum – volume: 9 start-page: e51912 year: 2020 ident: 10.1016/j.matbio.2023.11.004_bib0038 article-title: Collective forces of tumor spheroids in three-dimensional biopolymer networks publication-title: Elife doi: 10.7554/eLife.51912 contributor: fullname: Mark – volume: 219 start-page: 69 year: 2016 ident: 10.1016/j.matbio.2023.11.004_bib0033 article-title: Transforms and operators for directional bioimage analysis: a survey publication-title: Adv. Anatom. Embryol. Cell Biol. doi: 10.1007/978-3-319-28549-8_3 contributor: fullname: Püspöki – volume: 15 start-page: 1 issue: 4 year: 2019 ident: 10.1016/j.matbio.2023.11.004_bib0059 article-title: Dynamic filopodial forces induce accumulation, damage, and plastic remodeling of 3D extracellular matrices publication-title: PLoS Comput. Biol. doi: 10.1371/journal.pcbi.1006684 contributor: fullname: Malandrino – volume: 6 issue: 3 year: 2011 ident: 10.1016/j.matbio.2023.11.004_bib0024 article-title: Three-dimensional traction force microscopy: a new tool for quantifying cell-matrix interactions publication-title: PLoS ONE doi: 10.1371/journal.pone.0017833 contributor: fullname: Franck – volume: 7 start-page: 1 issue: 5 year: 2012 ident: 10.1016/j.matbio.2023.11.004_bib0064 article-title: Parameter-free binarization and skeletonization of fiber networks from confocal image stacks publication-title: PLoS ONE doi: 10.1371/journal.pone.0036575 contributor: fullname: Krauss – volume: 40 start-page: 2552 issue: 7 year: 2009 ident: 10.1016/j.matbio.2023.11.004_bib0034 article-title: Effect of aging on elastin functionality in human cerebral arteries publication-title: Stroke doi: 10.1161/STROKEAHA.108.528091 contributor: fullname: Fonck – ident: 10.1016/j.matbio.2023.11.004_bib0014 doi: 10.1007/s43152-021-00030-3 – volume: 32 start-page: 527 year: 2016 ident: 10.1016/j.matbio.2023.11.004_bib0016 article-title: Mechanical control of epithelial-to-Mesenchymal transitions in development and cancer publication-title: Annu. Rev. Cell Dev. Biol. doi: 10.1146/annurev-cellbio-111315-125150 contributor: fullname: Przybyla – year: 2011 ident: 10.1016/j.matbio.2023.11.004_bib0010 article-title: Fibroblasts and myofibroblasts in wound healing: force generation and measurement publication-title: J. Tissue Viabil. doi: 10.1016/j.jtv.2009.11.004 contributor: fullname: Li – year: 1993 ident: 10.1016/j.matbio.2023.11.004_bib0032 article-title: Spatio-temporal image processing doi: 10.1007/3-540-57418-2 contributor: fullname: Jähne – volume: 11 start-page: 1 issue: 1 year: 2020 ident: 10.1016/j.matbio.2023.11.004_bib0015 article-title: Concepts of extracellular matrix remodelling in tumour progression and metastasis publication-title: Nat. Commun. doi: 10.1038/s41467-020-18794-x contributor: fullname: Winkler – ident: 10.1016/j.matbio.2023.11.004_bib0023 doi: 10.1073/pnas.76.3.1274 – volume: 12 start-page: 2165 issue: 6A year: 2008 ident: 10.1016/j.matbio.2023.11.004_bib0003 article-title: Smooth muscle signalling pathways in health and disease: contractility in health and diseasereview series publication-title: J. Cell. Mol. Med. doi: 10.1111/j.1582-4934.2008.00552.x contributor: fullname: Kim – year: 2017 ident: 10.1016/j.matbio.2023.11.004_bib0040 article-title: Mechanical response of collagen networks to nonuniform microscale loads publication-title: Soft Matter doi: 10.1039/C7SM00561J contributor: fullname: Burkel – start-page: 516758 year: 2023 ident: 10.1016/j.matbio.2023.11.004_bib0029 article-title: Dynamic traction force measurements of migrating immune cells in 3D matrices publication-title: bioRxiv contributor: fullname: Böhringer – year: 1999 ident: 10.1016/j.matbio.2023.11.004_bib0020 article-title: Stresses at the cell-to-substrate interface during locomotion of fibroblasts contributor: fullname: Dembo – volume: 71 start-page: 153 year: 2017 ident: 10.1016/j.matbio.2023.11.004_bib0053 article-title: Mechanosensing in liver regeneration publication-title: Seminar. Cell Dev. Biol. doi: 10.1016/j.semcdb.2017.07.041 contributor: fullname: Song – start-page: 248179 year: 2020 ident: 10.1016/j.matbio.2023.11.004_bib0051 article-title: Cell-Scale biophysical cues from collagen fiber architecture instruct cell behavior and the propagation of mechanosensory signals publication-title: bioRxiv contributor: fullname: Szulczewski – volume: 285 start-page: 367 issue: 2 year: 1992 ident: 10.1016/j.matbio.2023.11.004_bib0019 article-title: Eicosanoid-mediated contractility of hepatic stellate cells publication-title: Biochem. J. doi: 10.1042/bj2850367 contributor: fullname: Kawada – volume: 9 start-page: 62 issue: 1 year: 1979 ident: 10.1016/j.matbio.2023.11.004_bib0057 article-title: A threshold selection method from gray-Level histograms publication-title: IEEE Trans. Syst. Man Cybern. doi: 10.1109/TSMC.1979.4310076 contributor: fullname: Otsu – year: 2016 ident: 10.1016/j.matbio.2023.11.004_bib0025 article-title: Three-dimensional force microscopy of cells in biopolymer networks publication-title: Nat. Methods doi: 10.1038/nmeth.3685 contributor: fullname: Steinwachs – volume: 11 start-page: 461 issue: 3–4 year: 2012 ident: 10.1016/j.matbio.2023.11.004_bib0035 article-title: Experimental investigation of collagen waviness and orientation in the arterial adventitia using confocal laser scanning microscopy publication-title: Biomech. Model. Mechanobiol. doi: 10.1007/s10237-011-0325-z contributor: fullname: Rezakhaniha – ident: 10.1016/j.matbio.2023.11.004_bib0055 – volume: 118 start-page: 657 issue: 3 year: 2020 ident: 10.1016/j.matbio.2023.11.004_bib0002 article-title: Measurement of skeletal muscle fiber contractility with high-Speed traction microscopy publication-title: Biophys. J. doi: 10.1016/j.bpj.2019.12.014 contributor: fullname: Rausch – volume: 79 start-page: 498 issue: 3 year: 2017 ident: 10.1016/j.matbio.2023.11.004_bib0049 article-title: Mechanical cellcell communication in fibrous networks: the importance of network geometry publication-title: Bull. Math. Biol. doi: 10.1007/s11538-016-0242-5 contributor: fullname: Humphries – volume: 94 start-page: 207 issue: 1 year: 2008 ident: 10.1016/j.matbio.2023.11.004_bib0022 article-title: High resolution traction force microscopy based on experimental and computational advances publication-title: Biophys. J. doi: 10.1529/biophysj.107.113670 contributor: fullname: Sabass – ident: 10.1016/j.matbio.2023.11.004_bib0028 doi: 10.1073/pnas.1504258112 – volume: 48 start-page: 1 issue: 3 year: 2022 ident: 10.1016/j.matbio.2023.11.004_bib0001 article-title: The desmin mutation R349P increases contractility and fragility of stem cell-generated muscle micro-tissues publication-title: Neuropathol. Appl. Neurobiol. doi: 10.1111/nan.12784 contributor: fullname: Spörrer – volume: 6 start-page: 4 issue: March year: 2016 ident: 10.1016/j.matbio.2023.11.004_bib0056 article-title: Differential response of patient-derived primary glioblastoma cells to environmental stiffness publication-title: Sci. Rep. contributor: fullname: Grundy – start-page: 545 year: 2011 ident: 10.1016/j.matbio.2023.11.004_bib0030 contributor: fullname: Knutsson – volume: 5 start-page: 28 issue: 1 year: 2014 ident: 10.1016/j.matbio.2023.11.004_bib0044 article-title: Automated quantification of aligned collagen for human breast carcinoma prognosis publication-title: J. Pathol. Inform. doi: 10.4103/2153-3539.139707 contributor: fullname: Eliceiri – volume: 422 start-page: 746 issue: 6933 year: 2003 ident: 10.1016/j.matbio.2023.11.004_bib0004 article-title: Cell division publication-title: Nature doi: 10.1038/nature01599 contributor: fullname: Scholey – volume: 28 start-page: 4326 issue: 49 year: 2009 ident: 10.1016/j.matbio.2023.11.004_bib0013 article-title: Matrix density-induced mechanoregulation of breast cell phenotype, signaling and gene expression through a FAK-ERK linkage publication-title: Oncogene doi: 10.1038/onc.2009.299 contributor: fullname: Provenzano – volume: 13 start-page: 771 issue: 7 year: 2011 ident: 10.1016/j.matbio.2023.11.004_bib0005 article-title: External forces control mitotic spindle positioning publication-title: Nat. Cell Biol. doi: 10.1038/ncb2269 contributor: fullname: Fink – volume: 8 start-page: 1 issue: 2 year: 2021 ident: 10.1016/j.matbio.2023.11.004_bib0043 article-title: Navigating the collagen jungle: the biomedical potential of fiber organization in cancer publication-title: Bioengineering doi: 10.3390/bioengineering8020017 contributor: fullname: Ouellette – volume: 105 start-page: 1967 issue: 9 year: 2013 ident: 10.1016/j.matbio.2023.11.004_bib0063 article-title: Estimating the 3D pore size distribution of biopolymer networks from directionally biased data publication-title: Biophys. J. doi: 10.1016/j.bpj.2013.09.038 contributor: fullname: Lang – start-page: 223149 year: 2020 ident: 10.1016/j.matbio.2023.11.004_sbref0046 article-title: Quantifying the dynamics of long-range cell-cell mechanical communication publication-title: bioRxiv contributor: fullname: Nahum – year: 1981 ident: 10.1016/j.matbio.2023.11.004_bib0018 article-title: Fibroblast traction as a mechanism for collagen morphogenesis publication-title: Nature doi: 10.1038/290249a0 contributor: fullname: Harris – volume: 10 start-page: 469 issue: 6 year: 2011 ident: 10.1016/j.matbio.2023.11.004_bib0008 article-title: Collective cell guidance by cooperative intercellular forces publication-title: Nat. Mater. doi: 10.1038/nmat3025 contributor: fullname: Tambe – volume: 24 start-page: 41 issue: 1 year: 2006 ident: 10.1016/j.matbio.2023.11.004_bib0058 article-title: Nonlinear structure tensors publication-title: Image Vis. Comput. doi: 10.1016/j.imavis.2005.09.010 contributor: fullname: Brox – volume: 18 start-page: 3969 year: 2020 ident: 10.1016/j.matbio.2023.11.004_bib0060 article-title: Impact of crosslink heterogeneity on extracellular matrix mechanics and remodeling publication-title: Comput. Struct. Biotechnol. J. doi: 10.1016/j.csbj.2020.11.038 contributor: fullname: Mak – volume: 5 start-page: 357 issue: 2 year: 2013 ident: 10.1016/j.matbio.2023.11.004_bib0036 article-title: Glioma surgical aspirate: a viable source of tumor tissue for experimental research publication-title: Cancers (Basel) doi: 10.3390/cancers5020357 contributor: fullname: Day – ident: 10.1016/j.matbio.2023.11.004_bib0062 – volume: 40 start-page: 84 issue: 1 year: 2020 ident: 10.1016/j.matbio.2023.11.004_bib0052 article-title: Mechanotransduction in liver diseases publication-title: Semin. Liver Dis. doi: 10.1055/s-0039-3399502 contributor: fullname: Kang – start-page: 1 year: 2020 ident: 10.1016/j.matbio.2023.11.004_bib0007 article-title: Mechanical compartmentalization of the intestinal organoid enables crypt folding and collective cell migration publication-title: bioRxiv contributor: fullname: Pérez-González – volume: 20 start-page: 683 issue: 6 year: 2014 ident: 10.1016/j.matbio.2023.11.004_bib0048 article-title: Review of collagen i hydrogels for bioengineered tissue microenvironments: characterization of mechanics, structure, and transport publication-title: Tissue Eng. Part B: Rev. doi: 10.1089/ten.teb.2014.0086 contributor: fullname: Antoine – ident: 10.1016/j.matbio.2023.11.004_bib0066 – volume: 113 start-page: 11208 issue: 40 year: 2016 ident: 10.1016/j.matbio.2023.11.004_bib0047 article-title: Oriented collagen fibers direct tumor cell intravasation publication-title: Proc. Natl. Acad. Sci. U.S.A. doi: 10.1073/pnas.1610347113 contributor: fullname: Han – volume: 114 start-page: E1617 issue: 9 year: 2017 ident: 10.1016/j.matbio.2023.11.004_bib0026 article-title: Modeling the two-way feedback between contractility and matrix realignment reveals a nonlinear mode of cancer cell invasion publication-title: Proc. Natl. Acad. Sci. U.S.A. doi: 10.1073/pnas.1617037114 contributor: fullname: Ahmadzadeh – year: 2002 ident: 10.1016/j.matbio.2023.11.004_bib0021 article-title: Traction fields, moments, and strain energy that cells exert on their surroundings publication-title: AJP: Cell Physiol. contributor: fullname: Butler – volume: 12 start-page: 1 issue: 1 year: 2022 ident: 10.1016/j.matbio.2023.11.004_bib0037 article-title: Mechanosensitive expression of the mesenchymal subtype marker connective tissue growth factor in glioblastoma publication-title: Sci. Rep. doi: 10.1038/s41598-022-19175-8 contributor: fullname: Grundy – volume: 9 start-page: 4902 issue: 1 year: 2019 ident: 10.1016/j.matbio.2023.11.004_bib0039 article-title: A reference collection of patient-derived cell line and xenograft models of proneural, classical and mesenchymal glioblastoma publication-title: Sci. Rep. doi: 10.1038/s41598-019-41277-z contributor: fullname: Stringer – volume: 107 start-page: 1829 issue: 8 year: 2014 ident: 10.1016/j.matbio.2023.11.004_bib0027 article-title: Remodeling of fibrous extracellular matrices by contractile cells: predictions from discrete fiber network simulations publication-title: Biophys. J. doi: 10.1016/j.bpj.2014.08.029 contributor: fullname: Abhilash – volume: 4 start-page: 1 year: 2006 ident: 10.1016/j.matbio.2023.11.004_bib0045 article-title: Collagen reorganization at the tumor-stromal interface facilitates local invasion publication-title: BMC Med. doi: 10.1186/1741-7015-4-38 contributor: fullname: Provenzano – volume: 72 issue: 2 year: 2023 ident: 10.1016/j.matbio.2023.11.004_sbref0011 article-title: Epithelial RAC1-dependent cytoskeleton dynamics controls cell mechanics, cell shedding and barrier integrity in intestinal inflammation publication-title: Gut doi: 10.1136/gutjnl-2021-325520 contributor: fullname: Martínez-Sánchez – volume: 6 start-page: 1 year: 2008 ident: 10.1016/j.matbio.2023.11.004_bib0046 article-title: Collagen density promotes mammary tumor initiation and progression publication-title: BMC Med. doi: 10.1186/1741-7015-6-11 contributor: fullname: Provenzano |
SSID | ssj0004478 |
Score | 2.4777071 |
Snippet | Cells cultured in 3D fibrous biopolymer matrices exert traction forces on their environment that induce deformations and remodeling of the fiber network. By... |
SourceID | pubmedcentral proquest crossref pubmed |
SourceType | Open Access Repository Aggregation Database Index Database |
StartPage | 39 |
SubjectTerms | Cell Line Collagen - metabolism Extracellular Matrix - metabolism |
Title | Fiber alignment in 3D collagen networks as a biophysical marker for cell contractility |
URI | https://www.ncbi.nlm.nih.gov/pubmed/37967726 https://www.proquest.com/docview/2890757192 https://pubmed.ncbi.nlm.nih.gov/PMC10872942 |
Volume | 124 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1La9tAEF5KCiGX0iZ9uC-2UHoRayTtWo9jmjSkBZUekuKbWGlXjQOWjCND20N_e2d2tbIU59AGjDCy9fxGu_ONvpkh5D3nqYyTijOuuWYi9AWTulAsVGEY65JHPscE5-xrdH4pvsxn821UyWSXtMW0_H1nXsl9UIV1gCtmyf4Hsv1OYQV8B3xhCQjD8p8wPkO5hwee9A_7Tn9Re_zUM9DCNl5tJd432EtGesWiWTlQlijKWRuJIUburWAdUxzQKR_6qxlW8P_pdaWaeu6Or9c_Rlc2JnhLGo9R0U3XIxvVkrL32rMGex2ZluqfsZfzNkCPFLuyadrrUSAi5ANRRxdRFDMGz_TcTi3deBqlDIvMjQbcUAyGTFvLqJt8bdXNnWHdRhiup-DEwwVP8ehTrL1qOxcPkF4tDdQ8TiOgDXfU2P6WnQR-AoxCwLz9EKsnYsOF6Z-tLkgIO327q3H5lkYUuHsCB2TfHW3s2uzwlduy24Efc_GYPOoICD221vSEPND1ITk6rmXbLH_RD9RIgg3ah2Q_65QXR-S7sTXa2xpd1JSfUmdr1NkalfChA1uj1tYo2BpFW6MjW3tKLs8-XZycs64nByuFn7YM2C2XUaDKokoVcIdKx2oW8KqUQvmx0hVweq1kAjy9LNOqDMUsUUEc88qPCtiSPyN7dVPrF4TyqPALpYKgTMCVSnSiCqxc6utIA4eI0wlh7nbmK1t6JXeaxOvcIpEjEsBic0BiQt65e57DGImXJGvdbG5yfJkOewQyMyHPLQb9Hh14E5KM0On_gPXXx7_UiytTh90Z0sv7b_qKHGwfpddkr11v9BvwctvirbHKvw1WqQE |
link.rule.ids | 230,314,780,784,885,27924,27925 |
linkProvider | Elsevier |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Fiber+alignment+in+3D+collagen+networks+as+a+biophysical+marker+for+cell+contractility&rft.jtitle=Matrix+biology&rft.au=B%C3%B6hringer%2C+David&rft.au=Bauer%2C+Andreas&rft.au=Moravec%2C+Ivana&rft.au=Bischof%2C+Lars&rft.date=2023-12-01&rft.issn=0945-053X&rft.eissn=1569-1802&rft.volume=124&rft.spage=39&rft.epage=48&rft_id=info:doi/10.1016%2Fj.matbio.2023.11.004&rft_id=info%3Apmid%2F37967726&rft.externalDBID=PMC10872942 |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0945-053X&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0945-053X&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0945-053X&client=summon |