Downregulation of SERINC5 expression in buffy coats of HIV-1-infected patients with detectable or undetectable viral load
Among the host restriction factors against HIV, SERINC5 has been described in vitro , but the mRNA level of SERINC5 in vivo has been little studied. We compare SERINC5 expression in subjects with HIV-1 (highly active antiretroviral treatment (HAART) and HAART-naïve) with and without suppression of v...
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Published in | Molecular biology reports Vol. 48; no. 5; pp. 4247 - 4252 |
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Main Authors | , , , , , , , , |
Format | Journal Article |
Language | English |
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Dordrecht
Springer Netherlands
01.05.2021
Springer Nature B.V |
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ISSN | 0301-4851 1573-4978 1573-4978 |
DOI | 10.1007/s11033-021-06438-2 |
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Abstract | Among the host restriction factors against HIV, SERINC5 has been described in vitro
,
but the mRNA level of SERINC5 in vivo has been little studied. We compare SERINC5 expression in subjects with HIV-1 (highly active antiretroviral treatment (HAART) and HAART-naïve) with and without suppression of viral load. A cross-sectional study was performed with 107 individuals distributed as follows: 24 with HAART-naïve and detectable viral load (> 50 copies/mL), 13 with HAART and detectable viral load (> 50 copies/mL), 50 with HAART and undetectable viral load (≤ 50 copies/mL), and 20 without HIV-1. SERINC5 expression in buffy coats was determined using RT-qPCR. The viral load was determined using real-time PCR and the amount of CD4 + and CD8 + T-lymphocytes was measured using flow cytometry. The data were normalized with the Shapiro–Wilk test and the Kruskal–Wallis test was subsequently performed. The relative expression was compared with a T-test and the remaining data with the Mann–Whitney U-test. ANCOVA multiple linear regression analysis was performed between characteristics of patients with SERINC5 expression. The mean and SD of the SERINC5 expression in the three groups with HIV-1 was 0.9 ± 0.2 and without HIV-1 was 1.7 ± 0.14 (
P
< 0.001). Multiple linear regression did not show the participation of CD4 +, CD8 + , viral load, infection time, or treatment time. No differences in the SERINC5 expression were found among the studied groups of patients with HIV-1. When comparing the groups with and without HIV-1 infection, SERINC5 was downregulation in the HIV-1 groups. |
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AbstractList | Among the host restriction factors against HIV, SERINC5 has been described in vitro, but the mRNA level of SERINC5 in vivo has been little studied. We compare SERINC5 expression in subjects with HIV-1 (highly active antiretroviral treatment (HAART) and HAART-naïve) with and without suppression of viral load. A cross-sectional study was performed with 107 individuals distributed as follows: 24 with HAART-naïve and detectable viral load (> 50 copies/mL), 13 with HAART and detectable viral load (> 50 copies/mL), 50 with HAART and undetectable viral load (≤ 50 copies/mL), and 20 without HIV-1. SERINC5 expression in buffy coats was determined using RT-qPCR. The viral load was determined using real-time PCR and the amount of CD4 + and CD8 + T-lymphocytes was measured using flow cytometry. The data were normalized with the Shapiro-Wilk test and the Kruskal-Wallis test was subsequently performed. The relative expression was compared with a T-test and the remaining data with the Mann-Whitney U-test. ANCOVA multiple linear regression analysis was performed between characteristics of patients with SERINC5 expression. The mean and SD of the SERINC5 expression in the three groups with HIV-1 was 0.9 ± 0.2 and without HIV-1 was 1.7 ± 0.14 (P < 0.001). Multiple linear regression did not show the participation of CD4 +, CD8 + , viral load, infection time, or treatment time. No differences in the SERINC5 expression were found among the studied groups of patients with HIV-1. When comparing the groups with and without HIV-1 infection, SERINC5 was downregulation in the HIV-1 groups.Among the host restriction factors against HIV, SERINC5 has been described in vitro, but the mRNA level of SERINC5 in vivo has been little studied. We compare SERINC5 expression in subjects with HIV-1 (highly active antiretroviral treatment (HAART) and HAART-naïve) with and without suppression of viral load. A cross-sectional study was performed with 107 individuals distributed as follows: 24 with HAART-naïve and detectable viral load (> 50 copies/mL), 13 with HAART and detectable viral load (> 50 copies/mL), 50 with HAART and undetectable viral load (≤ 50 copies/mL), and 20 without HIV-1. SERINC5 expression in buffy coats was determined using RT-qPCR. The viral load was determined using real-time PCR and the amount of CD4 + and CD8 + T-lymphocytes was measured using flow cytometry. The data were normalized with the Shapiro-Wilk test and the Kruskal-Wallis test was subsequently performed. The relative expression was compared with a T-test and the remaining data with the Mann-Whitney U-test. ANCOVA multiple linear regression analysis was performed between characteristics of patients with SERINC5 expression. The mean and SD of the SERINC5 expression in the three groups with HIV-1 was 0.9 ± 0.2 and without HIV-1 was 1.7 ± 0.14 (P < 0.001). Multiple linear regression did not show the participation of CD4 +, CD8 + , viral load, infection time, or treatment time. No differences in the SERINC5 expression were found among the studied groups of patients with HIV-1. When comparing the groups with and without HIV-1 infection, SERINC5 was downregulation in the HIV-1 groups. Among the host restriction factors against HIV, SERINC5 has been described in vitro, but the mRNA level of SERINC5 in vivo has been little studied. We compare SERINC5 expression in subjects with HIV-1 (highly active antiretroviral treatment (HAART) and HAART-naïve) with and without suppression of viral load. A cross-sectional study was performed with 107 individuals distributed as follows: 24 with HAART-naïve and detectable viral load (> 50 copies/mL), 13 with HAART and detectable viral load (> 50 copies/mL), 50 with HAART and undetectable viral load (≤ 50 copies/mL), and 20 without HIV-1. SERINC5 expression in buffy coats was determined using RT-qPCR. The viral load was determined using real-time PCR and the amount of CD4 + and CD8 + T-lymphocytes was measured using flow cytometry. The data were normalized with the Shapiro–Wilk test and the Kruskal–Wallis test was subsequently performed. The relative expression was compared with a T-test and the remaining data with the Mann–Whitney U-test. ANCOVA multiple linear regression analysis was performed between characteristics of patients with SERINC5 expression. The mean and SD of the SERINC5 expression in the three groups with HIV-1 was 0.9 ± 0.2 and without HIV-1 was 1.7 ± 0.14 (P < 0.001). Multiple linear regression did not show the participation of CD4 +, CD8 + , viral load, infection time, or treatment time. No differences in the SERINC5 expression were found among the studied groups of patients with HIV-1. When comparing the groups with and without HIV-1 infection, SERINC5 was downregulation in the HIV-1 groups. Among the host restriction factors against HIV, SERINC5 has been described in vitro , but the mRNA level of SERINC5 in vivo has been little studied. We compare SERINC5 expression in subjects with HIV-1 (highly active antiretroviral treatment (HAART) and HAART-naïve) with and without suppression of viral load. A cross-sectional study was performed with 107 individuals distributed as follows: 24 with HAART-naïve and detectable viral load (> 50 copies/mL), 13 with HAART and detectable viral load (> 50 copies/mL), 50 with HAART and undetectable viral load (≤ 50 copies/mL), and 20 without HIV-1. SERINC5 expression in buffy coats was determined using RT-qPCR. The viral load was determined using real-time PCR and the amount of CD4 + and CD8 + T-lymphocytes was measured using flow cytometry. The data were normalized with the Shapiro–Wilk test and the Kruskal–Wallis test was subsequently performed. The relative expression was compared with a T-test and the remaining data with the Mann–Whitney U-test. ANCOVA multiple linear regression analysis was performed between characteristics of patients with SERINC5 expression. The mean and SD of the SERINC5 expression in the three groups with HIV-1 was 0.9 ± 0.2 and without HIV-1 was 1.7 ± 0.14 ( P < 0.001). Multiple linear regression did not show the participation of CD4 +, CD8 + , viral load, infection time, or treatment time. No differences in the SERINC5 expression were found among the studied groups of patients with HIV-1. When comparing the groups with and without HIV-1 infection, SERINC5 was downregulation in the HIV-1 groups. |
Author | Hernández-López, Elsie Guadalupe Cárdenas-Bedoya, Jhonathan Carbajal-Uribe, David Alejandro González-Enríquez, Gracia Viviana Rincón-Sánchez, Ana Rosa Torres-Mendoza, Blanca Miriam Escoto-Delgadillo, Martha Pérez-Ríos, Alma Minerva Vázquez-Valls, Eduardo |
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Cites_doi | 10.1128/mBio.00588-20 10.1007/s11904-017-0356-x 10.1093/cid/civ327 10.1016/j.chom.2014.05.011 10.1089/AID.2018.0162 10.1128/JVI.00594-20 10.1128/JVI.01221-19 10.1155/2017/1548905 10.1074/jbc.M117.797332 10.1371/journal.ppat.1002442 10.1038/nature15400 10.1128/JVI.01554-19 10.1038/s41594-019-0357-0 10.3389/fimmu.2019.01606 10.1146/annurev-virology-092917-043308 10.1128/JVI.00196-18 10.1038/s41590-018-0085-3 10.1074/jbc.M117.777714 10.1016/j.coviro.2013.08.004 10.1159/000504888 10.1099/jgv.0.001026 10.7448/IAS.20.1.21865 |
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publication-title: J Virol doi: 10.1128/JVI.01221-19 – volume: 61 start-page: 651 year: 2015 ident: 6438_CR18 publication-title: Clin Infect Dis doi: 10.1093/cid/civ327 – volume: 14 start-page: 1 year: 2020 ident: 6438_CR2 publication-title: J Innate Immun doi: 10.1159/000504888 – volume: 11 start-page: e00588 year: 2020 ident: 6438_CR12 publication-title: mBio doi: 10.1128/mBio.00588-20 – volume: 7 start-page: e1002442 year: 2011 ident: 6438_CR10 publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1002442 – volume: 94 start-page: e01554 year: 2020 ident: 6438_CR13 publication-title: J Virol doi: 10.1128/JVI.01554-19 – volume: 3 start-page: 692 year: 2013 ident: 6438_CR16 publication-title: Curr Opin Virol doi: 10.1016/j.coviro.2013.08.004 – volume: 5 start-page: 323 year: 2018 ident: 6438_CR1 publication-title: Annu Rev Virol doi: 10.1146/annurev-virology-092917-043308 – volume: 292 start-page: 13702 year: 2017 ident: 6438_CR3 publication-title: J Biol Chem doi: 10.1074/jbc.M117.797332 – volume: 27 start-page: 78 year: 2020 ident: 6438_CR21 publication-title: Nat Struct Mol Biol doi: 10.1038/s41594-019-0357-0 – volume: 526 start-page: 218 year: 2015 ident: 6438_CR6 publication-title: Nature doi: 10.1038/nature15400 – volume: 35 start-page: 108 year: 2019 ident: 6438_CR14 publication-title: AIDS Res Hum Retroviruses doi: 10.1089/AID.2018.0162 – volume: 19 start-page: 475 year: 2018 ident: 6438_CR19 publication-title: Nat Immunol doi: 10.1038/s41590-018-0085-3 – volume: 292 start-page: 6014 year: 2017 ident: 6438_CR8 publication-title: J Biol Chem doi: 10.1074/jbc.M117.777714 – volume: 20 start-page: 21865 year: 2017 ident: 6438_CR11 publication-title: J Int AIDS Soc doi: 10.7448/IAS.20.1.21865 – volume: 94 start-page: e00594 year: 2020 ident: 6438_CR7 publication-title: J Virol doi: 10.1128/JVI.00594-20 |
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Snippet | Among the host restriction factors against HIV, SERINC5 has been described in vitro
,
but the mRNA level of SERINC5 in vivo has been little studied. We compare... Among the host restriction factors against HIV, SERINC5 has been described in vitro, but the mRNA level of SERINC5 in vivo has been little studied. We compare... |
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SubjectTerms | Adolescent Adult Aged analysis of covariance Animal Anatomy Animal Biochemistry antiretroviral agents Antiretroviral drugs Antiretroviral Therapy, Highly Active - methods Biomedical and Life Sciences Blood Buffy Coat - metabolism Buffy coat CD4 antigen CD4-Positive T-Lymphocytes - metabolism CD8 antigen CD8-Positive T-Lymphocytes - metabolism Cross-Sectional Studies Down-Regulation - genetics Female Flow cytometry gene expression Highly active antiretroviral therapy Histology HIV HIV infections HIV Infections - blood HIV Infections - drug therapy HIV Infections - genetics HIV Infections - virology HIV-1 - genetics Human immunodeficiency virus Humans Life Sciences Lymphocytes T Male Membrane Proteins - blood Membrane Proteins - genetics Middle Aged molecular biology Morphology mRNA Original Article Patients quantitative polymerase chain reaction Real-Time Polymerase Chain Reaction - methods Regression analysis Reverse Transcriptase Polymerase Chain Reaction - methods T-lymphocytes t-test Treatment Outcome viral load Viral Load - methods Young Adult |
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Title | Downregulation of SERINC5 expression in buffy coats of HIV-1-infected patients with detectable or undetectable viral load |
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