Flavobacterium humi sp. nov., a flexirubin-type pigment producing bacterium, isolated from soil

A yellow pigmented, Gram-stain-negative, strictly aerobic, rod-shaped, motile by means of gliding, catalase and oxidase positive bacterium, designated strain DS2-A T , was isolated from soil. Growth was observed at 4–32°C (optimum, 28°C), pH 6–9 (optimum, 7.0), and with 0–0.25% (w/v) NaCl (optimum,...

Full description

Saved in:
Bibliographic Details
Published inThe journal of microbiology Vol. 57; no. 12; pp. 1079 - 1085
Main Authors Kim, Inhyup, Kim, Jiyoun, Chhetri, Geeta, Seo, Taegun
Format Journal Article
LanguageEnglish
Published Seoul The Microbiological Society of Korea 01.12.2019
Springer Nature B.V
한국미생물학회
Subjects
Bacteria
Bacterial Typing Techniques
Base Composition
Biomedical and Life Sciences
Catalase
Deoxyribonucleic acid
DNA
DNA, Bacterial - genetics
Fatty acids
Fatty Acids - analysis
Flavobacterium
Flavobacterium - classification
Flavobacterium - genetics
Flavobacterium - isolation & purification
Flavobacterium - metabolism
Genomes
Gliding
Life Sciences
Lipids
Menaquinones
Microbial Systematics and Evolutionary Microbiology
Microbiology
New species
Non-coding RNA
Nucleic Acid Hybridization
Nucleotide sequence
Nucleotides
Phosphatidylethanolamine
Phosphatidylethanolamines - analysis
Phylogenetics
Phylogeny
Pigments
Pigments, Biological - metabolism
Polyenes - metabolism
Quinones
Republic of Korea
RNA, Ribosomal, 16S - genetics
rRNA 16S
Sequence Analysis, DNA
Sodium chloride
Soil
Soil bacteria
Soil Microbiology
Soil microorganisms
Soils
tRNA
Vitamin K 2 - analogs & derivatives
Vitamin K 2 - analysis
생물학
Republic of Korea
strictly aerobic
flexirubin-type pigment
gliding motility
polyphasic taxonomy
Flavobacterium humi
Online AccessGet full text

Cover

Abstract A yellow pigmented, Gram-stain-negative, strictly aerobic, rod-shaped, motile by means of gliding, catalase and oxidase positive bacterium, designated strain DS2-A T , was isolated from soil. Growth was observed at 4–32°C (optimum, 28°C), pH 6–9 (optimum, 7.0), and with 0–0.25% (w/v) NaCl (optimum, 0%). Phylogenetic analysis of 16S rRNA gene sequence revealed that strain DS2-A T belonged to the genus Flavobacterium and was most closely related to Flavobacterium aquatile LMG 4008 T (96.4%), Flavobacterium terrae DSM 18829 T (95.6%), Flavobacterium vireti THG-SM1 T (95.5%), Flavobacterium inkyongense IMCC27201 T (95.4%), Flavobacterium brevivitae TTM-43 T (95.2%), and Flavobacterium cucumis DSM 18830 T (95.2%). Strain DS2-A T produces flexirubin-type pigments. The major fatty acids were iso-C 15:0 , iso-C 17:0 3-OH, and iso-C 15:0 3-OH. The major respiratory quinone was identified as menaquinone-6. The major polar lipid was found to be phosphatidylethanolamine. The average nucleotide identity values between strain DS2-A T and selected taxa, F. aquatile LMG 4008 T , F. terrae DSM 18829 T , and F. cucumis DSM 18830 T , were 72, 72.7, and 71.6%, respectively. The draft genome of strain DS2-A T has a number of 14 contigs, scaffold N50 of 476,310 bp and a total size of 3,563,867 bp. Additionally, strain DS2-A T contains 3,127 of gene, 41 of tRNA, 6 of rRNA, and 3 of ncRNA. The DNA G + C content of stain DS2-A T was 40.7 mol%. Based on phylogenetic and phenotypic analyses, strain DS2-A T is considered as a novel species of the genus Flavobacterium , for which the name Flavobacterium humi sp. nov., (type strain DS2-A T = KACC 19715 T = JCM 32786 T ) has been proposed.
AbstractList A yellow pigmented, Gram-stain-negative, strictly aerobic, rod-shaped, motile by means of gliding, catalase and oxidase positive bacterium, designated strain DS2-AT, was isolated from soil. Growth was observed at 4–32°C (optimum, 28°C), pH 6–9 (optimum, 7.0), and with 0–0.25% (w/v) NaCl (optimum, 0%). Phylogenetic analysis of 16S rRNA gene sequence revealed that strain DS2-AT belonged to the genus Flavobacterium and was most closely related to Flavobacterium aquatile LMG 4008T (96.4%), Flavobacterium terrae DSM 18829T (95.6%), Flavobacterium vireti THG-SM1T (95.5%), Flavobacterium inkyongense IMCC27201T (95.4%), Flavobacterium brevivitae TTM-43T (95.2%), and Flavobacterium cucumis DSM 18830T (95.2%). Strain DS2-AT produces flexirubin-type pigments. The major fatty acids were iso-C15:0, iso-C17:0 3-OH, and iso-C15:0 3-OH. The major respiratory quinone was identified as menaquinone-6. The major polar lipid was found to be phosphatidylethanolamine. The average nucleotide identity values between strain DS2-AT and selected taxa, F. aquatile LMG 4008T, F. terrae DSM 18829T, and F. cucumis DSM 18830T, were 72, 72.7, and 71.6%, respectively. The draft genome of strain DS2-AT has a number of 14 contigs, scaffold N50 of 476,310 bp and a total size of 3,563,867 bp. Additionally, strain DS2-AT contains 3,127 of gene, 41 of tRNA, 6 of rRNA, and 3 of ncRNA. The DNA G + C content of stain DS2-AT was 40.7 mol%. Based on phylogenetic and phenotypic analyses, strain DS2-AT is considered as a novel species of the genus Flavobacterium, for which the name Flavobacterium humi sp. nov., (type strain DS2-AT = KACC 19715T = JCM 32786T) has been proposed.
A yellow pigmented, Gram-stain-negative, strictly aerobic, rod-shaped, motile by means of gliding, catalase and oxidase positive bacterium, designated strain DS2-A , was isolated from soil. Growth was observed at 4-32°C (optimum, 28°C), pH 6-9 (optimum, 7.0), and with 0-0.25% (w/v) NaCl (optimum, 0%). Phylogenetic analysis of 16S rRNA gene sequence revealed that strain DS2-A belonged to the genus Flavobacterium and was most closely related to Flavobacterium aquatile LMG 4008 (96.4%), Flavobacterium terrae DSM 18829 (95.6%), Flavobacterium vireti THG-SM1 (95.5%), Flavobacterium inkyongense IMCC27201 (95.4%), Flavobacterium brevivitae TTM-43 (95.2%), and Flavobacterium cucumis DSM 18830 (95.2%). Strain DS2-A produces flexirubin-type pigments. The major fatty acids were iso-C , iso-C 3-OH, and iso-C 3-OH. The major respiratory quinone was identified as menaquinone-6. The major polar lipid was found to be phosphatidylethanolamine. The average nucleotide identity values between strain DS2-A and selected taxa, F. aquatile LMG 4008 , F. terrae DSM 18829 , and F. cucumis DSM 18830 , were 72, 72.7, and 71.6%, respectively. The draft genome of strain DS2-A has a number of 14 contigs, scaffold N50 of 476,310 bp and a total size of 3,563,867 bp. Additionally, strain DS2-A contains 3,127 of gene, 41 of tRNA, 6 of rRNA, and 3 of ncRNA. The DNA G + C content of stain DS2-A was 40.7 mol%. Based on phylogenetic and phenotypic analyses, strain DS2-A is considered as a novel species of the genus Flavobacterium, for which the name Flavobacterium humi sp. nov., (type strain DS2-A = KACC 19715 = JCM 32786 ) has been proposed.
A yellow pigmented, Gram-stain-negative, strictly aerobic, rod-shaped, motile by means of gliding, catalase and oxidase positive bacterium, designated strain DS2-AT, was isolated from soil. Growth was observed at 4–32°C (optimum, 28°C), pH 6–9 (optimum, 7.0), and with 0–0.25% (w/v) NaCl (optimum, 0%). Phylogenetic analysis of 16S rRNA gene sequence revealed that strain DS2-AT belonged to the genus Flavobacterium and was most closely related to Flavobacterium aquatile LMG 4008T (96.4%), Flavobacterium terrae DSM 18829T (95.6%), Flavobacterium vireti THG-SM1T (95.5%), Flavobacterium inkyongense IMCC27201T (95.4%), Flavobacterium brevivitae TTM-43T (95.2%), and Flavobacterium cucumis DSM 18830T (95.2%). Strain DS2-AT produces flexirubin- type pigments. The major fatty acids were iso-C15:0, iso-C17:0 3-OH, and iso-C15:0 3-OH. The major respiratory quinone was identified as menaquinone-6. The major polar lipid was found to be phosphatidylethanolamine. The average nucleotide identity values between strain DS2-AT and selected taxa, F. aquatile LMG 4008T, F. terrae DSM 18829T, and F. cucumis DSM 18830T, were 72, 72.7, and 71.6%, respectively. The draft genome of strain DS2-AT has a number of 14 contigs, scaffold N50 of 476,310 bp and a total size of 3,563,867 bp. Additionally, strain DS2-AT contains 3,127 of gene, 41 of tRNA, 6 of rRNA, and 3 of ncRNA. The DNA G + C content of stain DS2-AT was 40.7 mol%. Based on phylogenetic and phenotypic analyses, strain DS2-AT is considered as a novel species of the genus Flavobacterium, for which the name Flavobacterium humi sp. nov., (type strain DS2-AT = KACC 19715T = JCM 32786T) has been proposed. KCI Citation Count: 24
A yellow pigmented, Gram-stain-negative, strictly aerobic, rod-shaped, motile by means of gliding, catalase and oxidase positive bacterium, designated strain DS2-A T , was isolated from soil. Growth was observed at 4–32°C (optimum, 28°C), pH 6–9 (optimum, 7.0), and with 0–0.25% (w/v) NaCl (optimum, 0%). Phylogenetic analysis of 16S rRNA gene sequence revealed that strain DS2-A T belonged to the genus Flavobacterium and was most closely related to Flavobacterium aquatile LMG 4008 T (96.4%), Flavobacterium terrae DSM 18829 T (95.6%), Flavobacterium vireti THG-SM1 T (95.5%), Flavobacterium inkyongense IMCC27201 T (95.4%), Flavobacterium brevivitae TTM-43 T (95.2%), and Flavobacterium cucumis DSM 18830 T (95.2%). Strain DS2-A T produces flexirubin-type pigments. The major fatty acids were iso-C 15:0 , iso-C 17:0 3-OH, and iso-C 15:0 3-OH. The major respiratory quinone was identified as menaquinone-6. The major polar lipid was found to be phosphatidylethanolamine. The average nucleotide identity values between strain DS2-A T and selected taxa, F. aquatile LMG 4008 T , F. terrae DSM 18829 T , and F. cucumis DSM 18830 T , were 72, 72.7, and 71.6%, respectively. The draft genome of strain DS2-A T has a number of 14 contigs, scaffold N50 of 476,310 bp and a total size of 3,563,867 bp. Additionally, strain DS2-A T contains 3,127 of gene, 41 of tRNA, 6 of rRNA, and 3 of ncRNA. The DNA G + C content of stain DS2-A T was 40.7 mol%. Based on phylogenetic and phenotypic analyses, strain DS2-A T is considered as a novel species of the genus Flavobacterium , for which the name Flavobacterium humi sp. nov., (type strain DS2-A T = KACC 19715 T = JCM 32786 T ) has been proposed.
A yellow pigmented, Gram-stain-negative, strictly aerobic, rod-shaped, motile by means of gliding, catalase and oxidase positive bacterium, designated strain DS2-AT, was isolated from soil. Growth was observed at 4-32°C (optimum, 28°C), pH 6-9 (optimum, 7.0), and with 0-0.25% (w/v) NaCl (optimum, 0%). Phylogenetic analysis of 16S rRNA gene sequence revealed that strain DS2-AT belonged to the genus Flavobacterium and was most closely related to Flavobacterium aquatile LMG 4008T (96.4%), Flavobacterium terrae DSM 18829T (95.6%), Flavobacterium vireti THG-SM1T (95.5%), Flavobacterium inkyongense IMCC27201T (95.4%), Flavobacterium brevivitae TTM-43T (95.2%), and Flavobacterium cucumis DSM 18830T (95.2%). Strain DS2-AT produces flexirubin-type pigments. The major fatty acids were iso-C15:0, iso-C17:0 3-OH, and iso-C15:0 3-OH. The major respiratory quinone was identified as menaquinone-6. The major polar lipid was found to be phosphatidylethanolamine. The average nucleotide identity values between strain DS2-AT and selected taxa, F. aquatile LMG 4008T, F. terrae DSM 18829T, and F. cucumis DSM 18830T, were 72, 72.7, and 71.6%, respectively. The draft genome of strain DS2-AT has a number of 14 contigs, scaffold N50 of 476,310 bp and a total size of 3,563,867 bp. Additionally, strain DS2-AT contains 3,127 of gene, 41 of tRNA, 6 of rRNA, and 3 of ncRNA. The DNA G + C content of stain DS2-AT was 40.7 mol%. Based on phylogenetic and phenotypic analyses, strain DS2-AT is considered as a novel species of the genus Flavobacterium, for which the name Flavobacterium humi sp. nov., (type strain DS2-AT = KACC 19715T = JCM 32786T) has been proposed.A yellow pigmented, Gram-stain-negative, strictly aerobic, rod-shaped, motile by means of gliding, catalase and oxidase positive bacterium, designated strain DS2-AT, was isolated from soil. Growth was observed at 4-32°C (optimum, 28°C), pH 6-9 (optimum, 7.0), and with 0-0.25% (w/v) NaCl (optimum, 0%). Phylogenetic analysis of 16S rRNA gene sequence revealed that strain DS2-AT belonged to the genus Flavobacterium and was most closely related to Flavobacterium aquatile LMG 4008T (96.4%), Flavobacterium terrae DSM 18829T (95.6%), Flavobacterium vireti THG-SM1T (95.5%), Flavobacterium inkyongense IMCC27201T (95.4%), Flavobacterium brevivitae TTM-43T (95.2%), and Flavobacterium cucumis DSM 18830T (95.2%). Strain DS2-AT produces flexirubin-type pigments. The major fatty acids were iso-C15:0, iso-C17:0 3-OH, and iso-C15:0 3-OH. The major respiratory quinone was identified as menaquinone-6. The major polar lipid was found to be phosphatidylethanolamine. The average nucleotide identity values between strain DS2-AT and selected taxa, F. aquatile LMG 4008T, F. terrae DSM 18829T, and F. cucumis DSM 18830T, were 72, 72.7, and 71.6%, respectively. The draft genome of strain DS2-AT has a number of 14 contigs, scaffold N50 of 476,310 bp and a total size of 3,563,867 bp. Additionally, strain DS2-AT contains 3,127 of gene, 41 of tRNA, 6 of rRNA, and 3 of ncRNA. The DNA G + C content of stain DS2-AT was 40.7 mol%. Based on phylogenetic and phenotypic analyses, strain DS2-AT is considered as a novel species of the genus Flavobacterium, for which the name Flavobacterium humi sp. nov., (type strain DS2-AT = KACC 19715T = JCM 32786T) has been proposed.
Author Chhetri, Geeta
Kim, Inhyup
Kim, Jiyoun
Seo, Taegun
Author_xml – sequence: 1
  givenname: Inhyup
  surname: Kim
  fullname: Kim, Inhyup
  organization: Department of Life Science, Dongguk University-Seoul
– sequence: 2
  givenname: Jiyoun
  surname: Kim
  fullname: Kim, Jiyoun
  organization: Department of Life Science, Dongguk University-Seoul
– sequence: 3
  givenname: Geeta
  surname: Chhetri
  fullname: Chhetri, Geeta
  organization: Department of Life Science, Dongguk University-Seoul
– sequence: 4
  givenname: Taegun
  surname: Seo
  fullname: Seo, Taegun
  email: tseo@dongguk.edu
  organization: Department of Life Science, Dongguk University-Seoul
BackLink https://www.ncbi.nlm.nih.gov/pubmed/31758394$$D View this record in MEDLINE/PubMed
https://www.kci.go.kr/kciportal/ci/sereArticleSearch/ciSereArtiView.kci?sereArticleSearchBean.artiId=ART002525255$$DAccess content in National Research Foundation of Korea (NRF)
BookMark eNp9kUtrFTEYhoNU7EV_gBsJuFFojrnNZGZZitVCQZC6DplcjmlnkjHJlNN_b3qmVijo6svieZK833sMDkIMFoC3BG8IxuJTJpSKBmHSo541GO1egCPSixYx0fODeqa0QV0n2CE4zvkG45YwTl-BQ0ZE07GeHwF5Maq7OChdbPLLBH8uk4d53sAQ7zanUEE32p1Py-ADKvezhbPfTjYUOKdoFu3DFj7Jp9DnOKpiDXQpTjBHP74GL50as33zOE_Aj4vP1-df0dW3L5fnZ1dIc9wWxAemnSFGN3xwnRmYYsIpMgiuiVGYNaQzlDQ1pXM9ZcZqS0RnWNfotusHzk7Ax_XekJy81V5G5fdzG-Vtkmffry9lSzlvOansh5WtGX4tNhc5-aztOKpg45Il3a9H9ARX9P0z9CYuKdQkewq3vOeiUu8eqWWYrJFz8pNK9_LPmitAVkCnmHOy7gkhWD5UKdcqZa1SPlQpd9URzxztiyo-hpKUH_9r0tXM9ZWwtenvp_8t_QZaTbI0
CitedBy_id crossref_primary_10_1016_j_btre_2021_e00592
crossref_primary_10_1002_cbdv_202300561
crossref_primary_10_1007_s12275_022_1474_8
crossref_primary_10_1007_s10482_023_01863_8
crossref_primary_10_1007_s10482_022_01800_1
crossref_primary_10_1007_s11274_024_04076_x
crossref_primary_10_1007_s00203_023_03657_y
crossref_primary_10_1099_ijsem_0_006474
crossref_primary_10_1007_s10482_021_01619_2
crossref_primary_10_1099_ijsem_0_004255
crossref_primary_10_1007_s00203_023_03751_1
crossref_primary_10_1038_s41429_022_00525_7
crossref_primary_10_1016_j_syapm_2024_126518
crossref_primary_10_1007_s00203_022_03359_x
crossref_primary_10_1007_s10482_024_02045_w
crossref_primary_10_3923_biotech_2021_15_21
crossref_primary_10_1016_j_chemosphere_2024_143776
crossref_primary_10_1007_s00284_021_02518_5
crossref_primary_10_1099_ijsem_0_005943
crossref_primary_10_1099_ijsem_0_004736
crossref_primary_10_1099_ijsem_0_004515
crossref_primary_10_1099_ijsem_0_005989
crossref_primary_10_1099_ijsem_0_004422
crossref_primary_10_1099_ijsem_0_005038
crossref_primary_10_3390_microorganisms11081900
crossref_primary_10_1099_ijsem_0_006107
crossref_primary_10_1099_ijsem_0_004984
crossref_primary_10_1099_ijsem_0_005176
crossref_primary_10_1099_ijsem_0_006542
crossref_primary_10_1038_s41467_024_54112_5
crossref_primary_10_1099_ijsem_0_005272
crossref_primary_10_3390_microorganisms10061187
crossref_primary_10_1007_s00284_020_02224_8
Cites_doi 10.1007/s12275-015-5280-4
10.1099/ijs.0.044495-0
10.2323/jgam.42.457
10.1099/ijs.0.054312-0
10.1099/ijs.0.048736-0
10.1007/s12275-018-8134-z
10.1099/ijs.0.000051
10.1099/ijs.0.047217-0
10.18388/abp.2014_870
10.1099/ijsem.0.002241
10.1093/bioinformatics/bts252
10.1099/ijs.0.018846-0
10.1099/ijs.0.008771-0
10.1007/BF01731581
10.1099/ijs.0.039974-0
10.1073/pnas.0906412106
10.1111/j.1558-5646.1985.tb00420.x
10.1007/s12275-017-6608-z
10.1093/nar/28.1.33
10.1099/ijsem.0.001728
10.1099/ijsem.0.000892
10.1099/ijsem.0.002701
10.1099/ijsem.0.001920
10.1007/s10295-012-1210-1
10.1016/0167-7012(84)90018-6
10.1111/j.1574-6968.1980.tb05056.x
10.1099/ijs.0.64483-0
10.1007/s10482-019-01235-1
10.1099/ijsem.0.002404
10.1099/ijs.0.045286-0
10.1093/nar/25.17.3389
10.1128/AEM.01495-09
10.1093/nar/gkz310
10.1007/s10482-017-0844-4
10.1007/s00203-018-1593-0
10.1016/S0580-9517(08)70410-0
10.1099/ijs.0.64935-0
10.1159/000077870
10.1099/ijsem.0.001925
10.1099/ijsem.0.002305
10.1128/AEM.05625-11
10.1128/JB.153.3.1238-1246.1983
10.1128/MMBR.45.2.316-354.1981
ContentType Journal Article
Copyright The Microbiological Society of Korea 2019
Copyright Springer Nature B.V. 2019
Copyright_xml – notice: The Microbiological Society of Korea 2019
– notice: Copyright Springer Nature B.V. 2019
DBID AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
7QL
7T7
7TM
7TN
7U9
8FD
C1K
F1W
FR3
H94
H95
K9.
L.G
M7N
P64
7X8
ACYCR
DOI 10.1007/s12275-019-9350-x
DatabaseName CrossRef
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
Bacteriology Abstracts (Microbiology B)
Industrial and Applied Microbiology Abstracts (Microbiology A)
Nucleic Acids Abstracts
Oceanic Abstracts
Virology and AIDS Abstracts
Technology Research Database
Environmental Sciences and Pollution Management
ASFA: Aquatic Sciences and Fisheries Abstracts
Engineering Research Database
AIDS and Cancer Research Abstracts
Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources
ProQuest Health & Medical Complete (Alumni)
Aquatic Science & Fisheries Abstracts (ASFA) Professional
Algology Mycology and Protozoology Abstracts (Microbiology C)
Biotechnology and BioEngineering Abstracts
MEDLINE - Academic
Korean Citation Index
DatabaseTitle CrossRef
MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
Aquatic Science & Fisheries Abstracts (ASFA) Professional
Virology and AIDS Abstracts
Technology Research Database
Nucleic Acids Abstracts
ProQuest Health & Medical Complete (Alumni)
Biotechnology and BioEngineering Abstracts
Environmental Sciences and Pollution Management
Oceanic Abstracts
Bacteriology Abstracts (Microbiology B)
Algology Mycology and Protozoology Abstracts (Microbiology C)
ASFA: Aquatic Sciences and Fisheries Abstracts
AIDS and Cancer Research Abstracts
Engineering Research Database
Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources
Industrial and Applied Microbiology Abstracts (Microbiology A)
MEDLINE - Academic
DatabaseTitleList Aquatic Science & Fisheries Abstracts (ASFA) Professional
MEDLINE


MEDLINE - Academic
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
DeliveryMethod fulltext_linktorsrc
Discipline Biology
EISSN 1976-3794
EndPage 1085
ExternalDocumentID oai_kci_go_kr_ARTI_6244641
31758394
10_1007_s12275_019_9350_x
Genre Journal Article
GeographicLocations Republic of Korea
GeographicLocations_xml – name: Republic of Korea
GroupedDBID ---
-56
-5G
-BR
-EM
-Y2
-~C
.86
.UV
.VR
06C
06D
0R~
0VY
123
1N0
203
29L
29~
2J2
2JN
2JY
2KG
2KM
2LR
2VQ
2~H
30V
3V.
4.4
406
408
40D
40E
53G
5VS
67N
6NX
7X7
88A
88E
8AO
8CJ
8FE
8FH
8FI
8FJ
8TC
8UJ
95-
95.
95~
96X
9ZL
A8Z
AAAVM
AABHQ
AACDK
AAHBH
AAHNG
AAIAL
AAJBT
AAJKR
AANXM
AANZL
AARHV
AARTL
AASML
AATNV
AATVU
AAUYE
AAWCG
AAYIU
AAYQN
AAYTO
AAYZH
ABAKF
ABDZT
ABECU
ABFTV
ABHLI
ABHQN
ABJNI
ABJOX
ABKCH
ABMNI
ABMQK
ABNWP
ABPLI
ABQBU
ABSXP
ABTEG
ABTHY
ABTKH
ABTMW
ABUWG
ABWNU
ABXPI
ACAOD
ACGFS
ACHSB
ACHXU
ACKNC
ACMDZ
ACMLO
ACOKC
ACOMO
ACPIV
ACPRK
ACSNA
ACZOJ
ADBBV
ADHHG
ADHIR
ADINQ
ADKNI
ADKPE
ADRFC
ADTPH
ADURQ
ADYFF
ADZKW
AEBTG
AEFQL
AEGAL
AEGNC
AEJHL
AEJRE
AEKMD
AEMSY
AENEX
AEOHA
AEPYU
AESKC
AETLH
AEUYN
AEVLU
AEXYK
AFBBN
AFGCZ
AFKRA
AFLOW
AFQWF
AFRAH
AFWTZ
AFZKB
AGAYW
AGDGC
AGJBK
AGMZJ
AGQEE
AGQMX
AGRTI
AGWIL
AGWZB
AGYKE
AHAVH
AHBYD
AHKAY
AHMBA
AHSBF
AHYZX
AIAKS
AIGIU
AIIXL
AILAN
AITGF
AJBLW
AJRNO
AKMHD
ALIPV
ALMA_UNASSIGNED_HOLDINGS
ALWAN
AMKLP
AMXSW
AMYLF
AMYQR
AOCGG
ARMRJ
ASPBG
AVWKF
AXYYD
AZFZN
B-.
BA0
BAWUL
BBNVY
BDATZ
BENPR
BGNMA
BHPHI
BKSAR
BPHCQ
BSONS
BVXVI
CAG
CCPQU
COF
CS3
CSCUP
D1J
DBRKI
DDRTE
DNIVK
DPUIP
DU5
EBD
EBLON
EBS
EIOEI
EJD
EMOBN
ESBYG
F5P
FEDTE
FERAY
FFXSO
FIGPU
FINBP
FNLPD
FRRFC
FSGXE
FWDCC
FYUFA
G-Y
G-Z
GGCAI
GGRSB
GJIRD
GNWQR
GQ6
GQ7
GW5
H13
HCIFZ
HF~
HG6
HLICF
HMCUK
HMJXF
HRMNR
HVGLF
HZ~
IJ-
IKXTQ
IWAJR
IXC
IXD
I~X
I~Z
J-C
J0Z
JBSCW
JZLTJ
KOV
KQ8
KVFHK
LK8
LLZTM
M0L
M1P
M4Y
M7P
MA-
MM.
N9A
NPVJJ
NQJWS
NU0
O9-
O9J
OK1
P2P
PCBAR
PF0
PQQKQ
PROAC
PSQYO
PT4
Q2X
QOR
QOS
R89
R9I
ROL
RPX
RSV
S16
S1Z
S27
S3A
S3B
SAP
SBL
SDH
SHX
SISQX
SJN
SJYHP
SNE
SNPRN
SNX
SOHCF
SOJ
SPISZ
SRMVM
SSLCW
SSXJD
STPWE
SV3
SZN
T13
TDB
TSG
TUC
TUS
U2A
U9L
UG4
UKHRP
UOJIU
UTJUX
UZXMN
VC2
VFIZW
W48
WK8
YLTOR
Z45
Z7U
Z7W
ZMTXR
ZOVNA
~A9
AAPKM
AAYXX
ABFSG
ACSTC
AEZWR
AFHIU
AFOHR
AHPBZ
AHWEU
AIXLP
ATHPR
CITATION
PHGZM
PHGZT
CGR
CUY
CVF
ECM
EIF
NPM
7QL
7T7
7TM
7TN
7U9
8FD
C1K
F1W
FR3
H94
H95
K9.
L.G
M7N
P64
PJZUB
PPXIY
PQGLB
7X8
ACDTI
ACYCR
ESTFP
ID FETCH-LOGICAL-c406t-4b3cfd1dc54bf8db3a37fa1b74c1da03518d215935ff923dece178d385c689b43
IEDL.DBID U2A
ISSN 1225-8873
1976-3794
IngestDate Sat Dec 14 03:16:24 EST 2024
Thu Jul 10 19:29:06 EDT 2025
Fri Jul 25 18:59:35 EDT 2025
Wed Feb 19 02:31:56 EST 2025
Thu Apr 24 23:04:29 EDT 2025
Tue Jul 01 01:01:34 EDT 2025
Fri Feb 21 02:35:14 EST 2025
IsPeerReviewed true
IsScholarly true
Issue 12
Keywords strictly aerobic
flexirubin-type pigment
gliding motility
polyphasic taxonomy
Flavobacterium humi
Language English
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c406t-4b3cfd1dc54bf8db3a37fa1b74c1da03518d215935ff923dece178d385c689b43
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 14
content type line 23
PMID 31758394
PQID 2317064947
PQPubID 54654
PageCount 7
ParticipantIDs nrf_kci_oai_kci_go_kr_ARTI_6244641
proquest_miscellaneous_2317587910
proquest_journals_2317064947
pubmed_primary_31758394
crossref_primary_10_1007_s12275_019_9350_x
crossref_citationtrail_10_1007_s12275_019_9350_x
springer_journals_10_1007_s12275_019_9350_x
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate 2019-12-01
PublicationDateYYYYMMDD 2019-12-01
PublicationDate_xml – month: 12
  year: 2019
  text: 2019-12-01
  day: 01
PublicationDecade 2010
PublicationPlace Seoul
PublicationPlace_xml – name: Seoul
– name: Korea (South)
PublicationTitle The journal of microbiology
PublicationTitleAbbrev J Microbiol
PublicationTitleAlternate J Microbiol
PublicationYear 2019
Publisher The Microbiological Society of Korea
Springer Nature B.V
한국미생물학회
Publisher_xml – sequence: 0
  name: 한국미생물학회
– name: The Microbiological Society of Korea
– name: Springer Nature B.V
References Feng, Han, Nogi, Hong, Lv (CR20) 2016; 66
Hiraishi, Ueda, Ishihara, Mori (CR26) 1996; 42
McBride, Xie, Martens, Lapidus, Henrissat, Rhodes, Goltsman, Wang, Xu, Hunnicutt (CR37) 2009; 75
Ngo, Kook, Yi (CR39) 2015; 65
Touchon, Barbier, Bernardet, Loux, Vacherie, Barbe, Rocha, Duchaud (CR47) 2011; 77
Yoon, Ha, Kwon, Lim, Kim, Seo, Chun (CR50) 2017; 67
Kang, Chun, Jahng (CR30) 2013; 63
Kuo, Saw, Kapan, Christensen, Kaneshiro (CR33) 2013; 63
Godchaux, Leadbetter (CR24) 1983; 153
Chhetri, Yang, Choi, Kim, Seo (CR12) 2018; 201
Ekwe, Ahn, Kim (CR17) 2017; 67
Bernardet, Segers, Vancanneyt, Berthe, Kersters, Vandamme (CR7) 1996; 46
Glaeser, Galatis, Martin, Kämpfer (CR23) 2013; 63
Lee, Jeon (CR35) 2018; isolatedfromafreshwaterriver.Int.J.Syst.EMicrobiol.
Smibert, Krieg, Gerhardt, Murray, Wood, Krieg (CR45) 1994
Weon, Song, Son, Kim, Kwon, Go, Stackebrandt (CR49) 2007; 57
Tatusov, Galperin, Natale, Koonin (CR46) 2000; 28
Kuykendall, Roy, O'Neill, Devine (CR34) 1988; 38
Fujii, Nagai, Watanabe, Shirasawa (CR21) 2014; 64
Chhetri, Kim, Kim, Kim, Seo (CR11) 2019; 112
Collins, Jones (CR15) 1981; 45
McBride (CR36) 2004; 7
Bergey, Harrison, Breed, Hammer, Huntoon, Breed (CR3) 1957
Kimura (CR31) 1980; 16
Fautz, Reichenbach (CR18) 1980; 8
Minnikin, O’Donnell, Goodfellow, Alderson, Athalye, Schaal, Parlett (CR38) 1984; 2
Bernardet, Bowman (CR5) 2011; 4
Saitou, Nei (CR44) 1987; 4
Chen, Su, Sheu (CR10) 2017; 67
Altschul, Madden, Schaffer, Zhang, Zhang, Miller, Lipman (CR2) 1997; 25
Park, Kim, Kim, Heo (CR40) 2016; 53
Zhao, Cheng, Zhang, Gao, Zhang, Zhang (CR52) 2018; 68
Jang, Lee, Cha, Seo (CR28) 2017; 55
Choi, Shin, Kim, Yi (CR14) 2017; 67
Reichenbach, Kohl, Achenbach, Reichenbach, Weeks (CR42) 1981
Joung, Kim, Joh (CR29) 2013; 63
Huang, Zhou, Li, Peng, Lu, Du (CR27) 2013; 40
Chaudhary, Kim (CR9) 2017; 67
Yoon, Ha, Lim, Kwon, Chun (CR51) 2017; 110
Ali, Cousin, Frühling, Brambilla, Schumann, Yang, Stackebrandt (CR1) 2009; 59
Komagata, Suzuki (CR32) 1987; 19
Richter, Rosselló-Móra (CR43) 2009; 106
Bernardet, Bowman, Dworkin, Falkow, Rosenberg, Schleifer, Stackebrandt (CR4) 2006
Dong, Chen, Du, Wang (CR16) 2013; 63
Choi, Lee, Jang, Cha, Seo (CR13) 2018; 56
Pruesse, Peplies, Glockner (CR41) 2012; 28
Blin, Shaw, Steinke, Villebro, Ziemert, Lee, Medema, Weber (CR8) 2019; 47
Felsenstein (CR19) 1985; 39
Venil, Zakaria, Ahmad (CR48) 2015; 62
Goris, Konstantinidis, Klappenbach, Coenye, Vandamme, Tiedje (CR25) 2007; 57
Zhou, Zhang, Yang, Zhang, He, Ning (CR53) 2017; 67
Fu, Tang, Lai, Zhang, Zhong, Li, Liu, Chen, Sun, Shao (CR22) 2011; 61
Bernardet, Nakagawa, Holmes (CR6) 2002; 52
WM Chen (9350_CR10) 2017; 67
G Chhetri (9350_CR11) 2019; 112
K Komagata (9350_CR32) 1987; 19
N Saitou (9350_CR44) 1987; 4
Z Ali (9350_CR1) 2009; 59
J Choi (9350_CR13) 2018; 56
D Fujii (9350_CR21) 2014; 64
DE Minnikin (9350_CR38) 1984; 2
Y Joung (9350_CR29) 2013; 63
H Reichenbach (9350_CR42) 1981
S Choi (9350_CR14) 2017; 67
AP Ekwe (9350_CR17) 2017; 67
SH Park (9350_CR40) 2016; 53
Y Fu (9350_CR22) 2011; 61
JF Bernardet (9350_CR6) 2002; 52
Q Feng (9350_CR20) 2016; 66
JF Bernardet (9350_CR4) 2006
HT Ngo (9350_CR39) 2015; 65
SH Yoon (9350_CR50) 2017; 67
E Fautz (9350_CR18) 1980; 8
W Godchaux 3rd (9350_CR24) 1983; 153
SH Yoon (9350_CR51) 2017; 110
K Dong (9350_CR16) 2013; 63
MY Zhou (9350_CR53) 2017; 67
G Chhetri (9350_CR12) 2018; 201
SP Glaeser (9350_CR23) 2013; 63
SF Altschul (9350_CR2) 1997; 25
JF Bernardet (9350_CR7) 1996; 46
JH Jang (9350_CR28) 2017; 55
RL Tatusov (9350_CR46) 2000; 28
MJ McBride (9350_CR37) 2009; 75
JF Bernardet (9350_CR5) 2011; 4
K Blin (9350_CR8) 2019; 47
MD Collins (9350_CR15) 1981; 45
E Pruesse (9350_CR41) 2012; 28
J Felsenstein (9350_CR19) 1985; 39
I Kuo (9350_CR33) 2013; 63
L Huang (9350_CR27) 2013; 40
DK Chaudhary (9350_CR9) 2017; 67
M Richter (9350_CR43) 2009; 106
LD Kuykendall (9350_CR34) 1988; 38
CK Venil (9350_CR48) 2015; 62
D Bergey (9350_CR3) 1957
JY Kang (9350_CR30) 2013; 63
Y Lee (9350_CR35) 2018; isolatedfromafr
JC Zhao (9350_CR52) 2018; 68
RM Smibert (9350_CR45) 1994
M Kimura (9350_CR31) 1980; 16
J Goris (9350_CR25) 2007; 57
A Hiraishi (9350_CR26) 1996; 42
MJ McBride (9350_CR36) 2004; 7
M Touchon (9350_CR47) 2011; 77
HY Weon (9350_CR49) 2007; 57
References_xml – volume: 53
  start-page: 756
  year: 2016
  end-page: 761
  ident: CR40
  article-title: sp. nov., isolated from marine brown alga Ecklonia cava
  publication-title: J. Microbiol.
  doi: 10.1007/s12275-015-5280-4
– volume: 4
  start-page: 112
  year: 2011
  end-page: 154
  ident: CR5
  article-title: Genus I.
  publication-title: Bergey’s Manual of Systematic Bacteriology
– volume: 63
  start-page: 1633
  year: 2013
  end-page: 1638
  ident: CR30
  article-title: sp. nov., isolated from freshwater, and emended description of the genus Flavobacterium
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.044495-0
– volume: 46
  start-page: 128
  year: 1996
  end-page: 148
  ident: CR7
  article-title: Cutting a Gordian knot: emended classification and description of the genus description of the family , and proposal of nom. nov. (Basonym, Strohl and Tait 1978)
  publication-title: Int. J. Syst. Evol. Microbiol.
– start-page: 309
  year: 1957
  end-page: 322
  ident: CR3
  article-title: Genus III.
  publication-title: Bergey’s Manual of Determinative Bacteriology
– volume: 42
  start-page: 457
  year: 1996
  end-page: 469
  ident: CR26
  article-title: Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection
  publication-title: J. Gen. Appl. Microbiol.
  doi: 10.2323/jgam.42.457
– volume: 64
  start-page: 1488
  year: 2014
  end-page: 1494
  ident: CR21
  article-title: sp. nov. and sp. nov., isolated from a wastewater treatment plant, and emended descriptions of Flavobacterium caeni and Flavobacterium terrigena
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.054312-0
– volume: 63
  start-page: 2841
  year: 2013
  end-page: 2847
  ident: CR23
  article-title: sp. nov., isolated from the skin of the medical leech Hirudo verbana
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.048736-0
– volume: 4
  start-page: 406
  year: 1987
  end-page: 425
  ident: CR44
  article-title: The neighbor-joining method: a new method for reconstructing phylogenetic trees
  publication-title: Mol. Biol. Evol.
– volume: 56
  start-page: 614
  year: 2018
  end-page: 618
  ident: CR13
  article-title: sp. nov., a marine bacterium isolated from seawater in South Korea
  publication-title: J. Microbiol.
  doi: 10.1007/s12275-018-8134-z
– volume: 65
  start-page: 983
  year: 2015
  end-page: 989
  ident: CR39
  article-title: sp. nov., isolated from Daemo Mountain soil
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.000051
– volume: 52
  start-page: 1049
  year: 2002
  end-page: 1070
  ident: CR6
  article-title: Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family
  publication-title: Int. J. Syst. Evol. Microbiol.
– volume: 63
  start-page: 3280
  year: 2013
  end-page: 3286
  ident: CR33
  article-title: sp. nov., from decaying wood of Wikstroemia oahuensis, Hawai’i, and emended description of the genus Flavobacterium
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.047217-0
– volume: 62
  start-page: 185
  year: 2015
  end-page: 190
  ident: CR48
  article-title: Optimization of culture conditions for flexirubin production by Chryseobacterium artocarpi CECT 8497 using response surface methodology
  publication-title: Acta Biochim. Pol.
  doi: 10.18388/abp.2014_870
– start-page: 101
  year: 1981
  end-page: 108
  ident: CR42
  article-title: The flexirubintype pigments
  publication-title: The Flavobacterium-Cytophaga group
– year: 2006
  ident: CR4
  article-title: The Genus
  publication-title: The Prokaryotes
– volume: 67
  start-page: 3996
  year: 2017
  end-page: 4001
  ident: CR53
  article-title: sp. nov., isolated from Antarctic soil
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.002241
– volume: 28
  start-page: 1823
  year: 2012
  end-page: 1829
  ident: CR41
  article-title: SINA: accurate highthroughput multiple sequence alignment of ribosomal RNA genes
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bts252
– volume: 61
  start-page: 205
  year: 2011
  end-page: 209
  ident: CR22
  article-title: sp. nov., isolated from marine sediment
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.018846-0
– volume: 59
  start-page: 2610
  year: 2009
  end-page: 2617
  ident: CR1
  article-title: Flavobacterium rivuli sp. nov., Flavobacterium subsaxonicum sp. nov., Flavobacterium swingsii sp. nov., and Flavobacterium reichenbachii sp. nov., isolated from a hard water rivulet
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.008771-0
– volume: 16
  start-page: 111
  year: 1980
  end-page: 120
  ident: CR31
  article-title: A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
  publication-title: J. Mol. Evol.
  doi: 10.1007/BF01731581
– volume: 63
  start-page: 886
  year: 2013
  end-page: 892
  ident: CR16
  article-title: sp. nov., isolated from soil, and emended descriptions of the genus Flavobacterium and Flavobacterium cauense, Flavobacterium saliperosum and Flavobacterium suncheonense
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.039974-0
– volume: 106
  start-page: 19126
  year: 2009
  end-page: 19131
  ident: CR43
  article-title: Shifting the genomic gold standard for the prokaryotic species definition
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.0906412106
– volume: 39
  start-page: 783
  year: 1985
  end-page: 791
  ident: CR19
  article-title: Confidence limits on phylogenies: An approach using the bootstrap
  publication-title: Evolution
  doi: 10.1111/j.1558-5646.1985.tb00420.x
– volume: 55
  start-page: 520
  year: 2017
  end-page: 524
  ident: CR28
  article-title: sp. nov., a bacterium isolated from soil in South Korea
  publication-title: J. Microbiol.
  doi: 10.1007/s12275-017-6608-z
– volume: 28
  start-page: 33
  year: 2000
  end-page: 36
  ident: CR46
  article-title: The COG database: a tool for genome-scale analysis of protein functions and evolution
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/28.1.33
– volume: 67
  start-page: 988
  year: 2017
  end-page: 992
  ident: CR14
  article-title: sp. nov., isolated from Pacific oyster
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.001728
– volume: 66
  start-page: 1394
  year: 2016
  end-page: 1400
  ident: CR20
  article-title: sp. nov., isolated from activated sludge
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.000892
– volume: 68
  start-page: 1509
  year: 2018
  end-page: 1513
  ident: CR52
  article-title: sp. nov., isolated from the rhizosphere of Artemisia annua L. and emended descriptions of Flavobacterium compostarboris and Flavobacterium procerum
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.002701
– volume: 67
  start-page: 2166
  year: 2017
  end-page: 2170
  ident: CR17
  article-title: sp. nov, isolated from freshwater
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.001920
– volume: 40
  start-page: 113
  year: 2013
  end-page: 122
  ident: CR27
  article-title: Characterization of a new alginate lyase from newly isolated sp
  publication-title: S20. J. Ind. Microbiol. Biotechnol.
  doi: 10.1007/s10295-012-1210-1
– volume: 2
  start-page: 233
  year: 1984
  end-page: 241
  ident: CR38
  article-title: An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids
  publication-title: J. Microbiol. Methods
  doi: 10.1016/0167-7012(84)90018-6
– volume: 8
  start-page: 87
  year: 1980
  end-page: 91
  ident: CR18
  article-title: A simple test for flexirubin-type pigments
  publication-title: FEMS Microbiol. Lett.
  doi: 10.1111/j.1574-6968.1980.tb05056.x
– volume: 57
  start-page: 81
  year: 2007
  end-page: 91
  ident: CR25
  article-title: DNA-DNA hybridization values and their relationship to whole-genome sequence similarities
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.64483-0
– volume: 112
  start-page: 1011
  year: 2019
  end-page: 1018
  ident: CR11
  article-title: sp. nov., a novel chitin-hydrolysing bacterium isolated from soil
  publication-title: Antonie van Leeuwenhoek
  doi: 10.1007/s10482-019-01235-1
– volume: 67
  start-page: 1613
  year: 2017
  end-page: 1617
  ident: CR50
  article-title: Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.002404
– volume: 63
  start-page: 3280
  year: 2013
  end-page: 3286
  ident: CR29
  article-title: sp. nov., isolated from a lagoon, and emended descriptions of Flavobacterium cheniae, Flavobacterium dongtanense and Flavobacterium gelidilacus
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.045286-0
– volume: 25
  start-page: 3389
  year: 1997
  end-page: 3402
  ident: CR2
  article-title: Gapped BLAST and PSIBLAST: a new generation of protein database search programs
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/25.17.3389
– volume: 38
  start-page: 358
  year: 1988
  end-page: 361
  ident: CR34
  article-title: Fatty acids, antibiotic resistance and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum
  publication-title: Int. J. Syst. Evol. Microbiol.
– volume: 75
  start-page: 6864
  year: 2009
  end-page: 6875
  ident: CR37
  article-title: Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium Johnsoniae as revealed by genome sequence analysis
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.01495-09
– volume: isolatedfromafreshwaterriver.Int.J.Syst.EMicrobiol.
  start-page: 68, 1919
  year: 2018
  end-page: 1924
  ident: CR35
  article-title: sp
  publication-title: nov.
– volume: 153
  start-page: 1238
  year: 1983
  end-page: 1246
  ident: CR24
  article-title: Unusual sulfonolipids are characteristic of the Cytophaga-Flexibacter group
  publication-title: J. Bacteriol.
– volume: 47
  start-page: 81
  year: 2019
  end-page: 87
  ident: CR8
  article-title: antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkz310
– volume: 110
  start-page: 1281
  year: 2017
  end-page: 1286
  ident: CR51
  article-title: A large-scale evaluation of algorithms to calculate average nucleotide identity
  publication-title: Antonie van Leeuwenhoek
  doi: 10.1007/s10482-017-0844-4
– volume: 201
  start-page: 539
  year: 2018
  end-page: 545
  ident: CR12
  article-title: sp. nov., isolated from soil from Jeju Island, Korea
  publication-title: Arch. Microbiol.
  doi: 10.1007/s00203-018-1593-0
– volume: 19
  start-page: 161
  year: 1987
  end-page: 205
  ident: CR32
  article-title: Lipid and cell-wall analysis in bacterial systematics
  publication-title: Methods Microbiol.
  doi: 10.1016/S0580-9517(08)70410-0
– volume: 45
  start-page: 316
  year: 1981
  end-page: 354
  ident: CR15
  article-title: Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication
  publication-title: Microbiol. Rev.
– volume: 57
  start-page: 1594
  year: 2007
  end-page: 1598
  ident: CR49
  article-title: sp. nov. and sp. nov., isolated from greenhouse soil
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.64935-0
– volume: 7
  start-page: 63
  year: 2004
  end-page: 71
  ident: CR36
  article-title: Cytophaga-Flavobacterium gliding motility
  publication-title: J. Mol. Microbiol. Biotechnol.
  doi: 10.1159/000077870
– volume: 67
  start-page: 2211
  year: 2017
  end-page: 2218
  ident: CR9
  article-title: sp. nov., a novel psychrotolerant bacterium isolated from oil-contaminated soil
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.001925
– start-page: 607
  year: 1994
  end-page: 654
  ident: CR45
  article-title: Phenotypic characterization
  publication-title: Methods for General and Molecular Bacteriology
– volume: 67
  start-page: 4416
  year: 2017
  end-page: 4423
  ident: CR10
  article-title: sp. nov., isolated from a freshwater spring
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.002305
– volume: 77
  start-page: 7656
  year: 2011
  end-page: 7662
  ident: CR47
  article-title: Complete genome sequence of the fish pathogen Flavobacterium branchiophilum
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.05625-11
– volume: 63
  start-page: 3280
  year: 2013
  ident: 9350_CR29
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.045286-0
– volume: 67
  start-page: 3996
  year: 2017
  ident: 9350_CR53
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.002241
– volume: 67
  start-page: 988
  year: 2017
  ident: 9350_CR14
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.001728
– volume: 63
  start-page: 886
  year: 2013
  ident: 9350_CR16
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.039974-0
– volume: 75
  start-page: 6864
  year: 2009
  ident: 9350_CR37
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.01495-09
– volume: 47
  start-page: 81
  year: 2019
  ident: 9350_CR8
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkz310
– start-page: 101
  volume-title: The Flavobacterium-Cytophaga group
  year: 1981
  ident: 9350_CR42
– volume: 61
  start-page: 205
  year: 2011
  ident: 9350_CR22
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.018846-0
– volume: 67
  start-page: 1613
  year: 2017
  ident: 9350_CR50
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.002404
– volume: 67
  start-page: 2211
  year: 2017
  ident: 9350_CR9
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.001925
– volume: 55
  start-page: 520
  year: 2017
  ident: 9350_CR28
  publication-title: J. Microbiol.
  doi: 10.1007/s12275-017-6608-z
– volume: 67
  start-page: 4416
  year: 2017
  ident: 9350_CR10
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.002305
– volume: 106
  start-page: 19126
  year: 2009
  ident: 9350_CR43
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.0906412106
– volume: 65
  start-page: 983
  year: 2015
  ident: 9350_CR39
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.000051
– volume: 77
  start-page: 7656
  year: 2011
  ident: 9350_CR47
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.05625-11
– start-page: 607
  volume-title: Methods for General and Molecular Bacteriology
  year: 1994
  ident: 9350_CR45
– volume: isolatedfromafr
  start-page: 68, 1919
  year: 2018
  ident: 9350_CR35
  publication-title: nov.
– volume: 63
  start-page: 1633
  year: 2013
  ident: 9350_CR30
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.044495-0
– volume: 66
  start-page: 1394
  year: 2016
  ident: 9350_CR20
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.000892
– start-page: 309
  volume-title: Bergey’s Manual of Determinative Bacteriology
  year: 1957
  ident: 9350_CR3
– volume: 39
  start-page: 783
  year: 1985
  ident: 9350_CR19
  publication-title: Evolution
  doi: 10.1111/j.1558-5646.1985.tb00420.x
– volume: 4
  start-page: 112
  year: 2011
  ident: 9350_CR5
  publication-title: Bergey’s Manual of Systematic Bacteriology
– volume: 4
  start-page: 406
  year: 1987
  ident: 9350_CR44
  publication-title: Mol. Biol. Evol.
– volume: 7
  start-page: 63
  year: 2004
  ident: 9350_CR36
  publication-title: J. Mol. Microbiol. Biotechnol.
  doi: 10.1159/000077870
– volume: 201
  start-page: 539
  year: 2018
  ident: 9350_CR12
  publication-title: Arch. Microbiol.
  doi: 10.1007/s00203-018-1593-0
– volume: 56
  start-page: 614
  year: 2018
  ident: 9350_CR13
  publication-title: J. Microbiol.
  doi: 10.1007/s12275-018-8134-z
– volume: 53
  start-page: 756
  year: 2016
  ident: 9350_CR40
  publication-title: J. Microbiol.
  doi: 10.1007/s12275-015-5280-4
– volume: 19
  start-page: 161
  year: 1987
  ident: 9350_CR32
  publication-title: Methods Microbiol.
  doi: 10.1016/S0580-9517(08)70410-0
– volume: 63
  start-page: 3280
  year: 2013
  ident: 9350_CR33
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.047217-0
– volume: 64
  start-page: 1488
  year: 2014
  ident: 9350_CR21
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.054312-0
– volume-title: The Prokaryotes
  year: 2006
  ident: 9350_CR4
– volume: 57
  start-page: 1594
  year: 2007
  ident: 9350_CR49
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.64935-0
– volume: 8
  start-page: 87
  year: 1980
  ident: 9350_CR18
  publication-title: FEMS Microbiol. Lett.
  doi: 10.1111/j.1574-6968.1980.tb05056.x
– volume: 42
  start-page: 457
  year: 1996
  ident: 9350_CR26
  publication-title: J. Gen. Appl. Microbiol.
  doi: 10.2323/jgam.42.457
– volume: 40
  start-page: 113
  year: 2013
  ident: 9350_CR27
  publication-title: S20. J. Ind. Microbiol. Biotechnol.
  doi: 10.1007/s10295-012-1210-1
– volume: 38
  start-page: 358
  year: 1988
  ident: 9350_CR34
  publication-title: Int. J. Syst. Evol. Microbiol.
– volume: 25
  start-page: 3389
  year: 1997
  ident: 9350_CR2
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/25.17.3389
– volume: 52
  start-page: 1049
  year: 2002
  ident: 9350_CR6
  publication-title: Int. J. Syst. Evol. Microbiol.
– volume: 59
  start-page: 2610
  year: 2009
  ident: 9350_CR1
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.008771-0
– volume: 16
  start-page: 111
  year: 1980
  ident: 9350_CR31
  publication-title: J. Mol. Evol.
  doi: 10.1007/BF01731581
– volume: 153
  start-page: 1238
  year: 1983
  ident: 9350_CR24
  publication-title: J. Bacteriol.
  doi: 10.1128/JB.153.3.1238-1246.1983
– volume: 46
  start-page: 128
  year: 1996
  ident: 9350_CR7
  publication-title: Int. J. Syst. Evol. Microbiol.
– volume: 112
  start-page: 1011
  year: 2019
  ident: 9350_CR11
  publication-title: Antonie van Leeuwenhoek
  doi: 10.1007/s10482-019-01235-1
– volume: 68
  start-page: 1509
  year: 2018
  ident: 9350_CR52
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.002701
– volume: 67
  start-page: 2166
  year: 2017
  ident: 9350_CR17
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijsem.0.001920
– volume: 62
  start-page: 185
  year: 2015
  ident: 9350_CR48
  publication-title: Acta Biochim. Pol.
  doi: 10.18388/abp.2014_870
– volume: 110
  start-page: 1281
  year: 2017
  ident: 9350_CR51
  publication-title: Antonie van Leeuwenhoek
  doi: 10.1007/s10482-017-0844-4
– volume: 63
  start-page: 2841
  year: 2013
  ident: 9350_CR23
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.048736-0
– volume: 45
  start-page: 316
  year: 1981
  ident: 9350_CR15
  publication-title: Microbiol. Rev.
  doi: 10.1128/MMBR.45.2.316-354.1981
– volume: 2
  start-page: 233
  year: 1984
  ident: 9350_CR38
  publication-title: J. Microbiol. Methods
  doi: 10.1016/0167-7012(84)90018-6
– volume: 28
  start-page: 1823
  year: 2012
  ident: 9350_CR41
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bts252
– volume: 57
  start-page: 81
  year: 2007
  ident: 9350_CR25
  publication-title: Int. J. Syst. Evol. Microbiol.
  doi: 10.1099/ijs.0.64483-0
– volume: 28
  start-page: 33
  year: 2000
  ident: 9350_CR46
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/28.1.33
SSID ssj0061342
Score 2.3612018
Snippet A yellow pigmented, Gram-stain-negative, strictly aerobic, rod-shaped, motile by means of gliding, catalase and oxidase positive bacterium, designated strain...
SourceID nrf
proquest
pubmed
crossref
springer
SourceType Open Website
Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 1079
SubjectTerms Bacteria
Bacterial Typing Techniques
Base Composition
Biomedical and Life Sciences
Catalase
Deoxyribonucleic acid
DNA
DNA, Bacterial - genetics
Fatty acids
Fatty Acids - analysis
Flavobacterium
Flavobacterium - classification
Flavobacterium - genetics
Flavobacterium - isolation & purification
Flavobacterium - metabolism
Genomes
Gliding
Life Sciences
Lipids
Menaquinones
Microbial Systematics and Evolutionary Microbiology
Microbiology
New species
Non-coding RNA
Nucleic Acid Hybridization
Nucleotide sequence
Nucleotides
Phosphatidylethanolamine
Phosphatidylethanolamines - analysis
Phylogenetics
Phylogeny
Pigments
Pigments, Biological - metabolism
Polyenes - metabolism
Quinones
Republic of Korea
RNA, Ribosomal, 16S - genetics
rRNA 16S
Sequence Analysis, DNA
Sodium chloride
Soil
Soil bacteria
Soil Microbiology
Soil microorganisms
Soils
tRNA
Vitamin K 2 - analogs & derivatives
Vitamin K 2 - analysis
생물학
Title Flavobacterium humi sp. nov., a flexirubin-type pigment producing bacterium, isolated from soil
URI https://link.springer.com/article/10.1007/s12275-019-9350-x
https://www.ncbi.nlm.nih.gov/pubmed/31758394
https://www.proquest.com/docview/2317064947
https://www.proquest.com/docview/2317587910
https://www.kci.go.kr/kciportal/ci/sereArticleSearch/ciSereArtiView.kci?sereArticleSearchBean.artiId=ART002525255
Volume 57
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
ispartofPNX The Journal of Microbiology, 2019, 57(12), , pp.1079-1085
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV1Lb9QwEB5BKyQuiDeBUhnECepqEzuOfVyhLgUEJ1YqJ8vxo426TVa7mwr-PeM8doUoSJxiyWPHmhl7Pns8Y4A3Mg0hGMloqpyi3BtDleCWCuVi9pSJsCwGOH_5Kk7n_NNZfjbEca_H2-6jS7JbqXfBbllWxItmiiqWTygCx_08bt1RiefZdFx-0Tx1L-YgdU5xBrHRlXlTF78Zo9v1KtyEM__wkXamZ3Yf7g2YkUx7IT-AW75-CHf6VyR_PgI9W5hrnJZd2uX2ily0VxVZL49J3VwfHxFDQkx6uWpxD0zjiStZVufxTJAsu2yv-EuybXxEKlRGxJ-OxMATsm6qxWOYz06-vT-lw7sJ1KJ53lBeMhtc6mzOyyBdyQwrgknLgtvUmeg6lA4tPbIgBMR3zlufFtIxmVshVcnZE9irm9o_A5KlnovgXMGC4D6zBgsyLxWWjQxsksBkZKC2Q1Lx-LbFQu_SIUeea-S5jjzXPxJ4u22y7DNq_Iv4NUpFX9pKxzzY8Xve6MuVRrT_UQvEJoKnCRyMQtPDDFxrxK0Fwi3FiwRebatx7kSHiKl90_Y0uSwQMSXwtBf2dkhdFVM8gXej9Hed_3W8z_-L-gXczaIydrdjDmBvs2r9S8Q4m_IQ9qcfvn8-Oex0-xeI9vQI
linkProvider Springer Nature
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV1Lb9QwEB5BEaIXxLspLRjECepqEzuOfaxQV1toe-pKvVmOHZeo22S1u6nKv2ecx64QBYlTLGXsWDMezxfPwwCfZOy9N5LRWDlFeWEMVYJbKpQL1VNGwrKQ4Hx2LiZT_u0yvezzuJdDtPvgkmx36k2yW5JkIdBMUcXSEUXg-AixgAxxXNPkaNh-0Ty1N-YgdUpRg9jgyrxviN-M0cNq4e_DmX_4SFvTM34GT3vMSI46IT-HB0X1Ah53t0j-fAl6PDO3qJZt2eXmhvxobkqynB-Sqr49PCCG-FD0ctHgPzANJ65kXl6FM0Eyb6u94ifJuvMBKXExIv50JCSekGVdzl7BdHx88XVC-3sTqEXzvKI8Z9a72NmU5166nBmWeRPnGbexM8F1KB1aemSB94jvXGGLOJOOydQKqXLOXsNWVVfFDpAkLrjwzmXMC14k1mBDprnCtpGejSIYDQzUti8qHu62mOlNOeTAc40814Hn-i6Cz-su866ixr-IP6JU9LUtdaiDHZ5Xtb5eaET7J1ogNhE8jmBvEJruNXCpEbdmCLcUzyL4sH6NuhMcIqYq6qajSWWGiCmCN52w11NqXzHFI_gySH8z-F_nu_tf1O_hyeTi7FSfnpx_fwvbSViYbaTMHmytFk2xj3hnlb9r1_cvh2b1Zw
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV1Lb9QwELagCNQL4llSChjECep2HTuOfayAVcuj4sBKvVmOHyXqNol2NxX8e8Z57ApRkDjFUsaONWN7vnjsbxB6LWkIwUhGqHKKcG8MUYJbIpSL7CkTYVm84PzlVBzP-Mez7GzIc7ocT7uPIcn-TkNkaapWh40Lh5uLb2max0NniiiWTQiAyFuwGtM4rGfp0bgUg6vqsueAdEZgNrExrHldE785ppvVIlyHOf-Il3ZuaHoP3R3wIz7qDX4f3fDVA3S7zyj58yHS07m5ginaUTC3l_h7e1niZXOAq_rqYB8bHCIB5qKF_2ESd19xU57H_UHcdMyv8Em8rryPSxiYgEUdjpdQ8LIu54_QbPrh27tjMuRQIBZc9YrwgtngqLMZL4J0BTMsD4YWObfUmRhGlA68PqggBMB6zltPc-mYzKyQquDsMdqq6so_QTilnovgXM6C4D61BgoyKxSUjQxskqDJqEBtB4LxmOdirjfUyFHnGnSuo871jwS9WVdpenaNfwm_AqvoC1vqyIkdn-e1vlhoQP4nWgBOEZwmaG80mh5m41IDhs0BeimeJ-jl-jXMoxgcMZWv214mkzmgpwTt9MZed6l7xRRP0NvR-pvG_9rf3f-SfoHufH0_1Z9PTj89RdtpHJfdoZk9tLVatP4ZQJ9V8bwb3r8An835ow
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Flavobacterium+humi+sp.+nov.%2C+a+flexirubin-type+pigment+producing+bacterium%2C+isolated+from+soil&rft.jtitle=The+journal+of+microbiology&rft.au=Kim%2C+Inhyup&rft.au=Kim%2C+Jiyoun&rft.au=Chhetri%2C+Geeta&rft.au=Seo%2C+Taegun&rft.date=2019-12-01&rft.issn=1225-8873&rft.eissn=1976-3794&rft.volume=57&rft.issue=12&rft.spage=1079&rft.epage=1085&rft_id=info:doi/10.1007%2Fs12275-019-9350-x&rft.externalDBID=n%2Fa&rft.externalDocID=10_1007_s12275_019_9350_x
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1225-8873&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1225-8873&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1225-8873&client=summon