Neural population dynamics underlying evidence accumulation in multiple rat brain regions
Accumulating evidence to make decisions is a core cognitive function. Previous studies have tended to estimate accumulation using either neural or behavioral data alone. Here, we develop a unified framework for modeling stimulus-driven behavior and multi-neuron activity simultaneously. We applied ou...
Saved in:
Published in | eLife Vol. 13 |
---|---|
Main Authors | , , |
Format | Journal Article |
Language | English |
Published |
England
eLife Sciences Publications Ltd
20.08.2024
eLife Sciences Publications, Ltd |
Subjects | |
Online Access | Get full text |
ISSN | 2050-084X 2050-084X |
DOI | 10.7554/eLife.84955 |
Cover
Loading…
Abstract | Accumulating evidence to make decisions is a core cognitive function. Previous studies have tended to estimate accumulation using either neural or behavioral data alone. Here, we develop a unified framework for modeling stimulus-driven behavior and multi-neuron activity simultaneously. We applied our method to choices and neural recordings from three rat brain regions—the posterior parietal cortex (PPC), the frontal orienting fields (FOF), and the anterior-dorsal striatum (ADS)—while subjects performed a pulse-based accumulation task. Each region was best described by a distinct accumulation model, which all differed from the model that best described the animal’s choices. FOF activity was consistent with an accumulator where early evidence was favored while the ADS reflected near perfect accumulation. Neural responses within an accumulation framework unveiled a distinct association between each brain region and choice. Choices were better predicted from all regions using a comprehensive, accumulation-based framework and different brain regions were found to differentially reflect choice-related accumulation signals: FOF and ADS both reflected choice but ADS showed more instances of decision vacillation. Previous studies relating neural data to behaviorally inferred accumulation dynamics have implicitly assumed that individual brain regions reflect the whole-animal level accumulator. Our results suggest that different brain regions represent accumulated evidence in dramatically different ways and that accumulation at the whole-animal level may be constructed from a variety of neural-level accumulators. |
---|---|
AbstractList | Accumulating evidence to make decisions is a core cognitive function. Previous studies have tended to estimate accumulation using either neural or behavioral data alone. Here, we develop a unified framework for modeling stimulus-driven behavior and multi-neuron activity simultaneously. We applied our method to choices and neural recordings from three rat brain regions—the posterior parietal cortex (PPC), the frontal orienting fields (FOF), and the anterior-dorsal striatum (ADS)—while subjects performed a pulse-based accumulation task. Each region was best described by a distinct accumulation model, which all differed from the model that best described the animal’s choices. FOF activity was consistent with an accumulator where early evidence was favored while the ADS reflected near perfect accumulation. Neural responses within an accumulation framework unveiled a distinct association between each brain region and choice. Choices were better predicted from all regions using a comprehensive, accumulation-based framework and different brain regions were found to differentially reflect choice-related accumulation signals: FOF and ADS both reflected choice but ADS showed more instances of decision vacillation. Previous studies relating neural data to behaviorally inferred accumulation dynamics have implicitly assumed that individual brain regions reflect the whole-animal level accumulator. Our results suggest that different brain regions represent accumulated evidence in dramatically different ways and that accumulation at the whole-animal level may be constructed from a variety of neural-level accumulators. Accumulating evidence to make decisions is a core cognitive function. Previous studies have tended to estimate accumulation using either neural or behavioral data alone. Here we develop a unified framework for modeling stimulus-driven behavior and multi-neuron activity simultaneously. We applied our method to choices and neural recordings from three rat brain regions - the posterior parietal cortex (PPC), the frontal orienting fields (FOF), and the anterior-dorsal striatum (ADS) - while subjects performed a pulse-based accumulation task. Each region was best described by a distinct accumulation model, which all differed from the model that best described the animal's choices. FOF activity was consistent with an accumulator where early evidence was favored while the ADS reflected near perfect accumulation. Neural responses within an accumulation framework unveiled a distinct association between each brain region and choice. Choices were better predicted from all regions using a comprehensive, accumulation-based framework and different brain regions were found to differentially reflect choice-related accumulation signals: FOF and ADS both reflected choice but ADS showed more instances of decision vacillation. Previous studies relating neural data to behaviorally-inferred accumulation dynamics have implicitly assumed that individual brain regions reflect the whole-animal level accumulator. Our results suggest that different brain regions represent accumulated evidence in dramatically different ways and that accumulation at the whole-animal level may be constructed from a variety of neural-level accumulators.Accumulating evidence to make decisions is a core cognitive function. Previous studies have tended to estimate accumulation using either neural or behavioral data alone. Here we develop a unified framework for modeling stimulus-driven behavior and multi-neuron activity simultaneously. We applied our method to choices and neural recordings from three rat brain regions - the posterior parietal cortex (PPC), the frontal orienting fields (FOF), and the anterior-dorsal striatum (ADS) - while subjects performed a pulse-based accumulation task. Each region was best described by a distinct accumulation model, which all differed from the model that best described the animal's choices. FOF activity was consistent with an accumulator where early evidence was favored while the ADS reflected near perfect accumulation. Neural responses within an accumulation framework unveiled a distinct association between each brain region and choice. Choices were better predicted from all regions using a comprehensive, accumulation-based framework and different brain regions were found to differentially reflect choice-related accumulation signals: FOF and ADS both reflected choice but ADS showed more instances of decision vacillation. Previous studies relating neural data to behaviorally-inferred accumulation dynamics have implicitly assumed that individual brain regions reflect the whole-animal level accumulator. Our results suggest that different brain regions represent accumulated evidence in dramatically different ways and that accumulation at the whole-animal level may be constructed from a variety of neural-level accumulators. |
Author | Brody, Carlos D Pillow, Jonathan W DePasquale, Brian |
Author_xml | – sequence: 1 givenname: Brian orcidid: 0000-0002-3830-3184 surname: DePasquale fullname: DePasquale, Brian – sequence: 2 givenname: Carlos D orcidid: 0000-0002-4201-561X surname: Brody fullname: Brody, Carlos D – sequence: 3 givenname: Jonathan W orcidid: 0000-0002-3638-8831 surname: Pillow fullname: Pillow, Jonathan W |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/39162374$$D View this record in MEDLINE/PubMed |
BookMark | eNptkt9rFDEQx4NUbK198l0WfBHkan5tfjxJKf4oHPqioE8hm8yeOXaTNdkt3H9vvOtJW8xDMsx85stkZp6jk5giIPSS4EvZtvwdrEMPl4rrtn2Czihu8Qor_uPknn2KLkrZ4nokV4roZ-iUaSIok_wM_fwCS7ZDM6VpGewcUmz8LtoxuNIs0UMediFuGrgNHqKDxjq3jEcyxKbac5gGaLKdmy7b6sqwqcHyAj3t7VDg4u49R98_fvh2_Xm1_vrp5vpqvXIci3lFW2-t6rTD3CtFJQinOwdaeSGAaKuAcCI4tIJ1ICzzwlkJwAhTHrwU7BzdHHR9slsz5TDavDPJBrN3pLwxNs_BDWAEZq7TwmohW947qynvaUeIt5j0siVV6_1Ba1q6EbyDONfmPBB9GInhl9mkW0Moxq2krCq8uVPI6fcCZTZjKA6GwUZISzEMa15_We-Kvn6EbtOSY-2VYRRzqpVUuFKv7pf0r5bjCCtADoDLqZQMvXFh3s-nVhgGQ7D5uylmvylmvyk15-2jnKPs_-g_6IvBQw |
CitedBy_id | crossref_primary_10_1371_journal_pcbi_1012790 |
Cites_doi | 10.3389/fninf.2013.00014 10.1038/s41467-022-30736-3 10.1016/j.neuron.2013.07.042 10.7554/eLife.04677 10.7554/eLife.17688 10.1037/a0038894 10.1016/j.jneumeth.2019.108432 10.1146/annurev.neuro.29.051605.113038 10.1038/5739 10.1037/0033-295X.113.4.700 10.1016/j.neuron.2010.12.037 10.1016/j.tics.2016.01.007 10.1523/JNEUROSCI.2929-08.2008 10.7554/eLife.56938 10.1038/s41593-020-0696-5 10.1038/s41467-021-26202-1 10.1038/35006062 10.1038/nature25510 10.1038/nn.3800 10.1016/j.neuron.2008.09.021 10.1523/JNEUROSCI.5752-11.2012 10.1038/nature14066 10.1523/JNEUROSCI.2036-14.2015 10.1016/j.neuron.2015.12.027 10.1007/978-3-030-03688-1 10.7554/eLife.34929 10.1016/j.cub.2014.05.049 10.1152/jn.2001.86.4.1916 10.1038/nature12742 10.1523/JNEUROSCI.4684-04.2005 10.1016/j.neuron.2011.07.010 10.1162/neco.2008.12-06-420 10.7554/eLife.63711 10.1038/s41586-020-03181-9 10.1523/JNEUROSCI.4998-11.2012 10.1126/science.aaa4056 10.1101/2021.10.07.463576 10.1126/science.1233912 10.1007/s42113-018-0016-2 10.1016/j.neuron.2017.01.030 10.1523/JNEUROSCI.22-21-09475.2002 10.7554/eLife.59716 10.1523/JNEUROSCI.2894-10.2010 10.1152/jn.01049.2002 10.7554/eLife.05457 10.1016/S0006-3495(67)86597-4 10.1038/nature08275 10.1152/jn.00669.2012 10.1016/j.neunet.2006.05.042 10.1038/nn.2501 10.1016/j.conb.2016.01.003 10.1016/j.neuron.2019.04.031 |
ContentType | Journal Article |
Copyright | 2024, DePasquale et al. 2024, DePasquale et al This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. 2024, DePasquale et al 2024 DePasquale et al |
Copyright_xml | – notice: 2024, DePasquale et al. – notice: 2024, DePasquale et al This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. – notice: 2024, DePasquale et al 2024 DePasquale et al |
DBID | AAYXX CITATION CGR CUY CVF ECM EIF NPM 3V. 7X7 7XB 88E 88I 8FE 8FH 8FI 8FJ 8FK ABUWG AFKRA AZQEC BBNVY BENPR BHPHI CCPQU DWQXO FYUFA GHDGH GNUQQ HCIFZ K9. LK8 M0S M1P M2P M7P PHGZM PHGZT PIMPY PJZUB PKEHL PPXIY PQEST PQGLB PQQKQ PQUKI PRINS Q9U 7X8 5PM DOA |
DOI | 10.7554/eLife.84955 |
DatabaseName | CrossRef Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed ProQuest Central (Corporate) Health & Medical Collection ProQuest Central (purchase pre-March 2016) Medical Database (Alumni Edition) Science Database (Alumni Edition) ProQuest SciTech Collection ProQuest Natural Science Collection Hospital Premium Collection Hospital Premium Collection (Alumni Edition) ProQuest Central (Alumni) (purchase pre-March 2016) ProQuest Central (Alumni) ProQuest Central UK/Ireland ProQuest Central Essentials Biological Science Collection ProQuest Central Natural Science Collection ProQuest One ProQuest Central Korea Health Research Premium Collection Health Research Premium Collection (Alumni) ProQuest Central Student SciTech Premium Collection ProQuest Health & Medical Complete (Alumni) Biological Sciences ProQuest Health & Medical Collection Medical Database Science Database Biological Science Database ProQuest Central Premium ProQuest One Academic (New) Publicly Available Content Database ProQuest Health & Medical Research Collection ProQuest One Academic Middle East (New) ProQuest One Health & Nursing ProQuest One Academic Eastern Edition (DO NOT USE) ProQuest One Applied & Life Sciences ProQuest One Academic ProQuest One Academic UKI Edition ProQuest Central China ProQuest Central Basic MEDLINE - Academic PubMed Central (Full Participant titles) DOAJ Directory of Open Access Journals |
DatabaseTitle | CrossRef MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) Publicly Available Content Database ProQuest Central Student ProQuest One Academic Middle East (New) ProQuest Central Essentials ProQuest Health & Medical Complete (Alumni) ProQuest Central (Alumni Edition) SciTech Premium Collection ProQuest One Community College ProQuest One Health & Nursing ProQuest Natural Science Collection ProQuest Central China ProQuest Central ProQuest One Applied & Life Sciences ProQuest Health & Medical Research Collection Health Research Premium Collection Health and Medicine Complete (Alumni Edition) Natural Science Collection ProQuest Central Korea Health & Medical Research Collection Biological Science Collection ProQuest Central (New) ProQuest Medical Library (Alumni) ProQuest Science Journals (Alumni Edition) ProQuest Biological Science Collection ProQuest Central Basic ProQuest Science Journals ProQuest One Academic Eastern Edition ProQuest Hospital Collection Health Research Premium Collection (Alumni) Biological Science Database ProQuest SciTech Collection ProQuest Hospital Collection (Alumni) ProQuest Health & Medical Complete ProQuest Medical Library ProQuest One Academic UKI Edition ProQuest One Academic ProQuest One Academic (New) ProQuest Central (Alumni) MEDLINE - Academic |
DatabaseTitleList | CrossRef MEDLINE - Academic MEDLINE Publicly Available Content Database |
Database_xml | – sequence: 1 dbid: DOA name: DOAJ Directory of Open Access Journals url: https://www.doaj.org/ sourceTypes: Open Website – sequence: 2 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 3 dbid: EIF name: MEDLINE url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search sourceTypes: Index Database – sequence: 4 dbid: BENPR name: ProQuest Central url: https://www.proquest.com/central sourceTypes: Aggregation Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Biology |
EISSN | 2050-084X |
ExternalDocumentID | oai_doaj_org_article_603cb96a96754fca924f2b11da01f751 PMC12005723 39162374 10_7554_eLife_84955 |
Genre | Journal Article |
GrantInformation_xml | – fundername: National Institute of Biomedical Imaging & Bioengineering grantid: 9RF1DA065404 - 04 – fundername: Simons Foundation grantid: SCGB AWD543027 – fundername: NINDS NIH HHS grantid: BRAIN Initiative Award 5U19NS104648-02 – fundername: Simons Foundation grantid: SCGB AWD542593 – fundername: Simons Foundation grantid: SCGB AWD543027 and AWD542593 – fundername: NINDS NIH HHS grantid: U19 NS104648 – fundername: NIBIB NIH HHS grantid: R01 EB026946 – fundername: ; grantid: SCGB AWD543027 – fundername: ; grantid: R01 EB026946 – fundername: ; grantid: 9RF1DA065404 - 04 – fundername: ; grantid: SCGB AWD542593 – fundername: ; grantid: BRAIN Initiative Award 5U19NS104648-02 |
GroupedDBID | 53G 5VS 7X7 88E 88I 8FE 8FH 8FI 8FJ AAFWJ AAKDD AAYXX ABUWG ACGFO ACGOD ACPRK ADBBV ADRAZ AENEX AFKRA AFPKN ALIPV ALMA_UNASSIGNED_HOLDINGS AOIJS AZQEC BAWUL BBNVY BCNDV BENPR BHPHI BPHCQ BVXVI CCPQU CITATION DIK DWQXO EMOBN FYUFA GNUQQ GROUPED_DOAJ GX1 HCIFZ HMCUK HYE IAO IEA IHR INH INR ISR ITC KQ8 LK8 M1P M2P M48 M7P M~E NQS OK1 PGMZT PHGZM PHGZT PIMPY PJZUB PPXIY PQGLB PQQKQ PROAC PSQYO RHI RNS RPM UKHRP CGR CUY CVF ECM EIF NPM 3V. 7XB 8FK K9. PKEHL PQEST PQUKI PRINS Q9U 7X8 5PM PUEGO |
ID | FETCH-LOGICAL-c406t-25daa8b9c04d8827e6c9bce98d66e19a8e14164e563be6a3d6ca7ee3138ded763 |
IEDL.DBID | M48 |
ISSN | 2050-084X |
IngestDate | Wed Aug 27 01:18:10 EDT 2025 Thu Aug 21 18:29:14 EDT 2025 Fri Jul 11 03:05:37 EDT 2025 Fri Jul 25 10:12:18 EDT 2025 Sun Apr 20 01:20:37 EDT 2025 Thu Apr 24 23:03:01 EDT 2025 Tue Aug 05 12:09:51 EDT 2025 |
IsDoiOpenAccess | true |
IsOpenAccess | true |
IsPeerReviewed | true |
IsScholarly | true |
Keywords | computational biology systems biology evidence accumulation rat decision-making neuroscience latent variable models |
Language | English |
License | 2024, DePasquale et al. This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited. |
LinkModel | DirectLink |
MergedId | FETCHMERGED-LOGICAL-c406t-25daa8b9c04d8827e6c9bce98d66e19a8e14164e563be6a3d6ca7ee3138ded763 |
Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 14 content type line 23 These authors contributed equally to this work. Department of Biomedical Engineering, Boston University, Boston, United States. |
ORCID | 0000-0002-4201-561X 0000-0002-3638-8831 0000-0002-3830-3184 |
OpenAccessLink | http://journals.scholarsportal.info/openUrl.xqy?doi=10.7554/eLife.84955 |
PMID | 39162374 |
PQID | 3204298780 |
PQPubID | 2045579 |
ParticipantIDs | doaj_primary_oai_doaj_org_article_603cb96a96754fca924f2b11da01f751 pubmedcentral_primary_oai_pubmedcentral_nih_gov_12005723 proquest_miscellaneous_3094827094 proquest_journals_3204298780 pubmed_primary_39162374 crossref_citationtrail_10_7554_eLife_84955 crossref_primary_10_7554_eLife_84955 |
PublicationCentury | 2000 |
PublicationDate | 2024-08-20 |
PublicationDateYYYYMMDD | 2024-08-20 |
PublicationDate_xml | – month: 08 year: 2024 text: 2024-08-20 day: 20 |
PublicationDecade | 2020 |
PublicationPlace | England |
PublicationPlace_xml | – name: England – name: Cambridge |
PublicationTitle | eLife |
PublicationTitleAlternate | Elife |
PublicationYear | 2024 |
Publisher | eLife Sciences Publications Ltd eLife Sciences Publications, Ltd |
Publisher_xml | – name: eLife Sciences Publications Ltd – name: eLife Sciences Publications, Ltd |
References | Beck (bib4) 2008; 60 Hanks (bib25) 2015; 520 Shadlen (bib48) 2001; 86 Kaufman (bib28) 2015; 4 Wiecki (bib53) 2013; 7 Akrami (bib2) 2018; 554 Zoltowski (bib55) 2019; 102 Zoltowski (bib56) 2020 Sanders (bib47) 2012; 108 Erlich (bib20) 2015; 4 Shinn (bib49) 2020; 9 Erlich (bib19) 2011; 72 Luo (bib34) 2020; 9 Chandrasekaran (bib13) 2019; 328 Zylberberg (bib57) 2016; 5 Peixoto (bib37) 2021; 591 Litwin-Kumar (bib33) 2017; 93 Bogacz (bib6) 2006; 113 Latimer (bib32) 2021 Turner (bib52) 2019 Park (bib36) 2014; 17 Aoi (bib3) 2020; 23 Ditterich (bib18) 2006; 19 Ding (bib17) 2013; 79 Gold (bib23) 2000; 404 Kim (bib30) 1999; 2 Gold (bib24) 2007; 30 Latimer (bib31) 2015; 349 Howard (bib26) 2018; 1 Brody (bib9) 2016; 37 Roitman (bib46) 2002; 22 Bollimunta (bib7) 2012; 32 Churchland (bib14) 2010; 13 Mante (bib35) 2013; 503 Brody-Lab (bib11) 2024 Huk (bib27) 2005; 25 Smith (bib50) 2008; 28 Genkin (bib22) 2021; 12 Kiani (bib29) 2014; 24 Turner (bib51) 2015; 122 Brunton (bib12) 2013; 340 Frank (bib21) 2015; 35 Yartsev (bib54) 2018; 7 Ratcliff (bib43) 2016; 20 Boyd-Meredith (bib8) 2022; 13 Purcell (bib39) 2016; 89 Churchland (bib15) 2011; 69 Ratcliff (bib42) 2008; 20 Perkel (bib38) 1967; 7 Raposo (bib40) 2012; 32 Resulaj (bib44) 2009; 461 Revels (bib45) 2016 Brody-Lab (bib10) 2024 Bishop (bib5) 2006 Ding (bib16) 2010; 30 Aguillon-Rodriguez (bib1) 2021; 10 Ratcliff (bib41) 2003; 90 |
References_xml | – volume: 7 year: 2013 ident: bib53 article-title: HDDM: Hierarchical bayesian estimation of the drift-diffusion model in python publication-title: Frontiers in Neuroinformatics doi: 10.3389/fninf.2013.00014 – volume: 13 year: 2022 ident: bib8 article-title: Stable choice coding in rat frontal orienting fields across model-predicted changes of mind publication-title: Nature Communications doi: 10.1038/s41467-022-30736-3 – volume: 79 start-page: 640 year: 2013 ident: bib17 article-title: The basal ganglia’s contributions to perceptual decision making publication-title: Neuron doi: 10.1016/j.neuron.2013.07.042 – volume: 4 year: 2015 ident: bib28 article-title: Vacillation, indecision and hesitation in moment-by-moment decoding of monkey motor cortex publication-title: eLife doi: 10.7554/eLife.04677 – start-page: 11680 year: 2020 ident: bib56 article-title: A general recurrent state space framework for modeling neural dynamics during decision-making – volume: 5 year: 2016 ident: bib57 article-title: The influence of evidence volatility on choice, reaction time and confidence in a perceptual decision publication-title: eLife doi: 10.7554/eLife.17688 – volume: 122 start-page: 312 year: 2015 ident: bib51 article-title: Informing cognitive abstractions through neuroimaging: the neural drift diffusion model publication-title: Psychological Review doi: 10.1037/a0038894 – volume: 328 year: 2019 ident: bib13 article-title: ChaRTr: An R toolbox for modeling choices and response times in decision-making tasks publication-title: Journal of Neuroscience Methods doi: 10.1016/j.jneumeth.2019.108432 – volume: 30 start-page: 535 year: 2007 ident: bib24 article-title: The neural basis of decision making publication-title: Annual Review of Neuroscience doi: 10.1146/annurev.neuro.29.051605.113038 – volume: 2 start-page: 176 year: 1999 ident: bib30 article-title: Neural correlates of a decision in the dorsolateral prefrontal cortex of the macaque publication-title: Nature Neuroscience doi: 10.1038/5739 – volume: 113 start-page: 700 year: 2006 ident: bib6 article-title: The physics of optimal decision making: a formal analysis of models of performance in two-alternative forced-choice tasks publication-title: Psychological Review doi: 10.1037/0033-295X.113.4.700 – volume: 69 start-page: 818 year: 2011 ident: bib15 article-title: Variance as a signature of neural computations during decision making publication-title: Neuron doi: 10.1016/j.neuron.2010.12.037 – volume: 20 start-page: 260 year: 2016 ident: bib43 article-title: Diffusion decision model: Current issues and history publication-title: Trends in Cognitive Sciences doi: 10.1016/j.tics.2016.01.007 – volume: 28 start-page: 12591 year: 2008 ident: bib50 article-title: Spatial and temporal scales of neuronal correlation in primary visual cortex publication-title: The Journal of Neuroscience doi: 10.1523/JNEUROSCI.2929-08.2008 – volume: 9 year: 2020 ident: bib49 article-title: A flexible framework for simulating and fitting generalized drift-diffusion models publication-title: eLife doi: 10.7554/eLife.56938 – volume: 23 start-page: 1410 year: 2020 ident: bib3 article-title: Prefrontal cortex exhibits multidimensional dynamic encoding during decision-making publication-title: Nature Neuroscience doi: 10.1038/s41593-020-0696-5 – volume: 12 year: 2021 ident: bib22 article-title: Learning non-stationary Langevin dynamics from stochastic observations of latent trajectories publication-title: Nature Communications doi: 10.1038/s41467-021-26202-1 – volume: 404 start-page: 390 year: 2000 ident: bib23 article-title: Representation of a perceptual decision in developing oculomotor commands publication-title: Nature doi: 10.1038/35006062 – volume: 554 start-page: 368 year: 2018 ident: bib2 article-title: Posterior parietal cortex represents sensory history and mediates its effects on behaviour publication-title: Nature doi: 10.1038/nature25510 – volume: 17 start-page: 1395 year: 2014 ident: bib36 article-title: Encoding and decoding in parietal cortex during sensorimotor decision-making publication-title: Nature Neuroscience doi: 10.1038/nn.3800 – volume: 60 start-page: 1142 year: 2008 ident: bib4 article-title: Probabilistic population codes for Bayesian decision making publication-title: Neuron doi: 10.1016/j.neuron.2008.09.021 – volume: 32 start-page: 12684 year: 2012 ident: bib7 article-title: Neural dynamics of choice: single-trial analysis of decision-related activity in parietal cortex publication-title: The Journal of Neuroscience doi: 10.1523/JNEUROSCI.5752-11.2012 – volume: 520 start-page: 220 year: 2015 ident: bib25 article-title: Distinct relationships of parietal and prefrontal cortices to evidence accumulation publication-title: Nature doi: 10.1038/nature14066 – volume: 35 start-page: 485 year: 2015 ident: bib21 article-title: fMRI and EEG predictors of dynamic decision parameters during human reinforcement learning publication-title: The Journal of Neuroscience doi: 10.1523/JNEUROSCI.2036-14.2015 – volume: 89 start-page: 658 year: 2016 ident: bib39 article-title: Neural mechanisms of post-error adjustments of decision policy in parietal cortex publication-title: Neuron doi: 10.1016/j.neuron.2015.12.027 – volume-title: Joint Models of Neural and Behavioral Data year: 2019 ident: bib52 doi: 10.1007/978-3-030-03688-1 – volume: 7 year: 2018 ident: bib54 article-title: Causal contribution and dynamical encoding in the striatum during evidence accumulation publication-title: eLife doi: 10.7554/eLife.34929 – volume: 24 start-page: 1542 year: 2014 ident: bib29 article-title: Dynamics of neural population responses in prefrontal cortex indicate changes of mind on single trials publication-title: Current Biology doi: 10.1016/j.cub.2014.05.049 – volume: 86 start-page: 1916 year: 2001 ident: bib48 article-title: Neural basis of a perceptual decision in the parietal cortex (area LIP) of the rhesus monkey publication-title: Journal of Neurophysiology doi: 10.1152/jn.2001.86.4.1916 – volume: 503 start-page: 78 year: 2013 ident: bib35 article-title: Context-dependent computation by recurrent dynamics in prefrontal cortex publication-title: Nature doi: 10.1038/nature12742 – volume: 25 start-page: 10420 year: 2005 ident: bib27 article-title: Neural activity in macaque parietal cortex reflects temporal integration of visual motion signals during perceptual decision making publication-title: The Journal of Neuroscience doi: 10.1523/JNEUROSCI.4684-04.2005 – volume: 72 start-page: 330 year: 2011 ident: bib19 article-title: A cortical substrate for memory-guided orienting in the rat publication-title: Neuron doi: 10.1016/j.neuron.2011.07.010 – volume: 20 start-page: 873 year: 2008 ident: bib42 article-title: The diffusion decision model: theory and data for two-choice decision tasks publication-title: Neural Computation doi: 10.1162/neco.2008.12-06-420 – volume: 10 year: 2021 ident: bib1 article-title: Standardized and reproducible measurement of decision-making in mice publication-title: eLife doi: 10.7554/eLife.63711 – volume: 591 start-page: 604 year: 2021 ident: bib37 article-title: Decoding and perturbing decision states in real time publication-title: Nature doi: 10.1038/s41586-020-03181-9 – volume-title: Software Heritage year: 2024 ident: bib10 article-title: PulseInputDDM.jl – volume: 32 start-page: 3726 year: 2012 ident: bib40 article-title: Multisensory decision-making in rats and humans publication-title: The Journal of Neuroscience doi: 10.1523/JNEUROSCI.4998-11.2012 – volume: 349 start-page: 184 year: 2015 ident: bib31 article-title: Neuronal modeling. Single-trial spike trains in parietal cortex reveal discrete steps during decision-making publication-title: Science doi: 10.1126/science.aaa4056 – volume-title: bioRxiv year: 2021 ident: bib32 article-title: Low-Dimensional Encoding of Decisions in Parietal Cortex Reflects Long-Term Training History doi: 10.1101/2021.10.07.463576 – volume: 340 start-page: 95 year: 2013 ident: bib12 article-title: Rats and humans can optimally accumulate evidence for decision-making publication-title: Science doi: 10.1126/science.1233912 – volume: 1 start-page: 237 year: 2018 ident: bib26 article-title: Evidence accumulation in a Laplace domain decision space publication-title: Computational Brain & Behavior doi: 10.1007/s42113-018-0016-2 – volume-title: Pattern Recognition and Machine Learning year: 2006 ident: bib5 – volume: 93 start-page: 1153 year: 2017 ident: bib33 article-title: Optimal degrees of synaptic connectivity publication-title: Neuron doi: 10.1016/j.neuron.2017.01.030 – volume: 22 start-page: 9475 year: 2002 ident: bib46 article-title: Response of neurons in the lateral intraparietal area during a combined visual discrimination reaction time task publication-title: The Journal of Neuroscience doi: 10.1523/JNEUROSCI.22-21-09475.2002 – volume: 9 year: 2020 ident: bib34 article-title: An approach for long-term, multi-probe Neuropixels recordings in unrestrained rats publication-title: eLife doi: 10.7554/eLife.59716 – volume: 30 start-page: 15747 year: 2010 ident: bib16 article-title: Caudate encodes multiple computations for perceptual decisions publication-title: The Journal of Neuroscience doi: 10.1523/JNEUROSCI.2894-10.2010 – volume-title: Software Hteritage year: 2024 ident: bib11 article-title: DePasquale-elife-2024 – volume: 90 start-page: 1392 year: 2003 ident: bib41 article-title: A comparison of macaque behavior and superior colliculus neuronal activity to predictions from models of two-choice decisions publication-title: Journal of Neurophysiology doi: 10.1152/jn.01049.2002 – volume: 4 year: 2015 ident: bib20 article-title: Distinct effects of prefrontal and parietal cortex inactivations on an accumulation of evidence task in the rat publication-title: eLife doi: 10.7554/eLife.05457 – volume: 7 start-page: 419 year: 1967 ident: bib38 article-title: Neuronal spike trains and stochastic point processes. II. Simultaneous spike trains publication-title: Biophysical Journal doi: 10.1016/S0006-3495(67)86597-4 – volume: 461 start-page: 263 year: 2009 ident: bib44 article-title: Changes of mind in decision-making publication-title: Nature doi: 10.1038/nature08275 – volume: 108 start-page: 3416 year: 2012 ident: bib47 article-title: Choice ball: a response interface for two-choice psychometric discrimination in head-fixed mice publication-title: Journal of Neurophysiology doi: 10.1152/jn.00669.2012 – volume: 19 start-page: 981 year: 2006 ident: bib18 article-title: Stochastic models of decisions about motion direction: behavior and physiology publication-title: Neural Networks doi: 10.1016/j.neunet.2006.05.042 – volume: 13 start-page: 369 year: 2010 ident: bib14 article-title: Stimulus onset quenches neural variability: a widespread cortical phenomenon publication-title: Nature Neuroscience doi: 10.1038/nn.2501 – volume-title: arXiv year: 2016 ident: bib45 article-title: Forward-Mode Automatic Differentiation in Julia – volume: 37 start-page: 149 year: 2016 ident: bib9 article-title: Neural underpinnings of the evidence accumulator publication-title: Current Opinion in Neurobiology doi: 10.1016/j.conb.2016.01.003 – volume: 102 start-page: 1249 year: 2019 ident: bib55 article-title: Discrete stepping and nonlinear ramping dynamics underlie spiking responses of LIP neurons during decision-making publication-title: Neuron doi: 10.1016/j.neuron.2019.04.031 |
SSID | ssj0000748819 |
Score | 2.3897328 |
Snippet | Accumulating evidence to make decisions is a core cognitive function. Previous studies have tended to estimate accumulation using either neural or behavioral... |
SourceID | doaj pubmedcentral proquest pubmed crossref |
SourceType | Open Website Open Access Repository Aggregation Database Index Database Enrichment Source |
SubjectTerms | Animals Approximation Behavior Brain Brain - physiology Caudate-putamen Choice Behavior Cognitive ability Computational and Systems Biology Cortex (frontal) Cortex (parietal) Decision Making evidence accumulation latent variable models Male Models, Neurological Neostriatum Neurons Neurons - physiology Neuroscience Parietal Lobe - physiology Population dynamics Rats Standard deviation |
SummonAdditionalLinks | – databaseName: DOAJ Directory of Open Access Journals dbid: DOA link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV3NS8UwDC8iCF7Eb-cXFTwJ07Xd68dRRRFRTwp6Gl2b4QOdou8d_O9Ntr3xnghevOyw5NAlaZN0SX6MHQqPQbeKLq0UhDSvHKQeTExt7pW1kBkT6b7j9k5fPeTXj4PHKagvqglrxwO3gjvRmQql095hZJtXwWO-UMlSiOgzUZmmeVqiz5tKppoz2KBhCtc25Bl0mSdwM6zg2GI-MJhxQc2k_t_Cy59VklNu53KZLXXxIj9t17nC5qBeZQstguTXGnui4RpIf-9xuHhsMeY_ObWHfbxQGxOHDjuU-xDGrxPOYc0n9YQcDYGXBBfBCaoBTXGdPVxe3J9fpR1aQhrQKY9SOYje29KFLI8YNhvQwZUBnI1ag3DegsDgKwdUTQnaq6iDNwBKKBsh4jGzwebrtxq2GMd9GYXSIWC2lssMrKhK6wN4V1GZtU7Y0USARehGiROixUuBKQVJu2ikXTTSTthhz_zeTtD4ne2MNNGz0Njr5gUaQ9EZQ_GXMSRsd6LHotuLn4WS5HStsVnCDnoy7iL6NeJreBsjD2a5KDN8JmyzVXu_EmpNlsogxc4YxMxSZyn18LmZ1C3ozs5Itf0fH7fDFiVGVHShLbNdNj_6GMMeRkSjcr8x_m9mNg0s priority: 102 providerName: Directory of Open Access Journals – databaseName: Health & Medical Collection dbid: 7X7 link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1Lb9QwEB5BERKXivIMFGSknpBC4zjrxwkBalUh4ESl5RQ59gRWKtntPg78e2YSJ7Co4pJDPAdrZux5eGY-gBPpyelW0eWtwpBXrcPco4m5rbyyFgtjIuc7Pn_RF5fVx_lsnhJum1RWOd6J_UUdl4Fz5Keq5KvTGlu8XV3njBrFr6sJQuM23OHRZVzSZeZmyrGQebRk8Ya2PEOG8xQ_LVp8YykqmO0Zon5e_01O5r-1kn8Zn_P7cJi8RvFuEPMR3MLuAdwdcCR_PYRvPGKD1lcTGpeIA9L8RnCT2PqKm5kEJgRR4UPY_RwpF50YqwoFqYNoGDRCMGADKeQjuDw_-_rhIk-YCXkg07zNy1n03jYuFFUk59mgDq4J6GzUGqXzFiW5YBWSgBrUXkUdvEFUUtmIkS6bx3DQLTt8CoJOZ5RKh0AxW1UWaGXbWB_Qu5aLrXUGr0cG1iENFGdci6uaAgvmdt1zu-65ncHJRLwa5mjcTPaeJTGR8PDr_sdy_b1OZ6nWhQqN095RsFO1wVMI2ZaNlNEXsjUzmcHxKMc6nchN_Ud_Mng1LdNZ4gcS3-FyRzQU6xLP6JvBk0Hs0064QblUhlbsnkLsbXV_pVv86Od1S87cmVI9-_--nsO9kjwmTliXxTEcbNc7fEEez7Z52av1bzDiBQc priority: 102 providerName: ProQuest |
Title | Neural population dynamics underlying evidence accumulation in multiple rat brain regions |
URI | https://www.ncbi.nlm.nih.gov/pubmed/39162374 https://www.proquest.com/docview/3204298780 https://www.proquest.com/docview/3094827094 https://pubmed.ncbi.nlm.nih.gov/PMC12005723 https://doaj.org/article/603cb96a96754fca924f2b11da01f751 |
Volume | 13 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1La9wwEB7yoGUvpW3S1m26KJBTwBvL8upxKk1JCCUJpXRhezKyNG4Xtt50swvNv-_IL7phT734YI3AzEPzjSzNB3DCLYFu4U1cCnRxVhqMLSof68wKrTFRyof9jptbeTXJPk_H0x3oyDhbBd5vLe0Cn9RkOR_9-f3wgQKe8OtIUTY8w-tZiSNNUH-8C_uUklSI0JsW59dLsiI_5aa5n_d4zgCehtunqVDZRnKqe_hvA56Pz0_-k5Aun8OzFkmyj43pX8AOVi_hScMt-XAA30PbDRq_6xm6mG_Y5-9ZuDi2nIcLTgxbVlFmnVv_6iRnFetOGjJyEVYEIgkWSBzISQ9hcnnx7dNV3PIoxI7S9SpOx95aXRiXZJ4AtULpTOHQaC8lcmM1coJlGZLRCpRWeOmsQhRcaI-eFqBXsFctKnwDjCLWcyGdozouSxPUvCy0dWhNGQ5gywhOOwXmrm0yHrgu5jkVG0Hxea34vFZ8BCe98F3TW2O72HmwRC8SGmLXLxbLH3kbX7lMhCuMtIYKoKx0lsrKMi049zbhpRrzCI46O-adk-UiDelYK51EcNwPU3yFnya2wsWaZKj-JZ3RM4LXjdn7L-ncJgK94RAbn7o5Us1-1j28edjNU6l4-_9T38EgJYQVNrjT5Aj2Vss1vieEtCqGsKumagj75xe3X74O632GYR0RfwEvkBh1 |
linkProvider | Scholars Portal |
linkToHtml | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1LbxMxEB6VVAguiDeBAkYqF6Sla3tjew8IUWiV0jRCqJXKaeu1ZyFS2YQ8hPqn-I2M9wVBFbde9hCPIu943uuZD2CbWwq6pU-jQqKLkiLFyKL2kUmsNAZjrX2odxyN1fAk-Xg6ON2AX20vTLhW2drEylD7qQs18h0pguk02sRvZz-igBoVvq62EBq1WBzixU9K2RZvDj7Q-b4UYn_v-P0walAFIkfOaxmJgbfW5KmLE0_hpUbl0txharxSyFNrkFOQkiC9Qo7KSq-c1YiSS-PRkzrS_16DzURSKtODzd298afPXVWHHLIhH1s3Ampy1Ts4mhT42lAeMlhzfRVCwGVh7b-3M_9yd_u34VYTp7J3tWDdgQ0s78L1Grny4h58CUM9aH3W4X8xX2PbL1hoS5ufh_Yphg1mKbPOrb63lJOStfcYGQkgywNMBQsQEaQC9-HkSvj5AHrltMRHwMgeeC6Vc8TaRMRoeJEb69CmRbjerfrwqmVg5poR5gFJ4zyjVCZwO6u4nVXc7sN2RzyrJ3dcTrYbTqIjCeO2qx-m869Zo72ZiqXLU2VTSq-SwllKWguRc-5tzAs94H3Yas8xa2zAIvsjsX140S2T9oZPMrbE6YpoKLsmntGzDw_rY-92ElqihdS0YtYEYm2r6yvl5Fs1IZyHWqEW8vH_9_UcbgyPj0bZ6GB8-ARuCorXQrlcxFvQW85X-JTirWX-rBFyBmdXrVe_AZLPRFw |
linkToPdf | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Lb9QwELZKEYgL4k2ggJHKBSlsbCe2c0AIKKuWlooDlZZTcOwJrFSyyz6E-tf4dczkBYsqbr3ksB6tnPE8nZn5GNsVDoNuFfK4UuDjtMohdmBCbFOnrIXEmED3HR-O9f5J-n6STbbYr74Xhsoqe5vYGOow83RHPlKSTKc1NhlVXVnEx73xq_mPmBCk6EtrD6fRisghnP3E9G358mAPz_qZlON3n97uxx3CQOzRka1imQXnbJn7JA0YahrQPi895DZoDSJ3FgQGLCng65SgnQraOwOghLIBAqom_u8ldtmoTJCOmYkZ7nfQNVv0tm1LoEGnPYKjaQUvLGYk2YYTbLACzgtw_63T_MvxjW-w613Eyl-3InaTbUF9i11pMSzPbrPPNN4D1-cDEhgPLcr9klOD2uKUGqk4dOil3Hm__t5TTmveVzRyFEVeEmAFJ7AIVIY77ORCuHmXbdezGu4zjpYhCKW9x3wxlQlYUZXWeXB5RYXeOmLPewYWvhtmTpgapwUmNcTtouF20XA7YrsD8byd4XE-2Rs6iYGEBm83P8wWX4tOjwudKF_m2uWYaKWVd5i-VrIUIrhEVCYTEdvpz7HorMGy-CO7EXs6LKMe08cZV8NsjTSYZyPP8Bmxe-2xDzuh5mipDK7YDYHY2OrmSj391swKF3RraKR68P99PWFXUZuKo4Pjw4fsmsTAje7NZbLDtleLNTzCwGtVPm4knLMvF61SvwHJ5kcs |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Neural+population+dynamics+underlying+evidence+accumulation+in+multiple+rat+brain+regions&rft.jtitle=eLife&rft.au=DePasquale%2C+Brian&rft.au=Brody%2C+Carlos+D&rft.au=Pillow%2C+Jonathan+W&rft.date=2024-08-20&rft.pub=eLife+Sciences+Publications%2C+Ltd&rft.eissn=2050-084X&rft.volume=13&rft_id=info:doi/10.7554%2FeLife.84955&rft_id=info%3Apmid%2F39162374&rft.externalDocID=PMC12005723 |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2050-084X&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2050-084X&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2050-084X&client=summon |