How tool combinations in different pipeline versions affect the outcome in RNA-seq analysis

Data analysis tools are continuously changed and improved over time. In order to test how these changes influence the comparability between analyses, the output of different workflow options of the nf-core/rnaseq pipeline were compared. Five different pipeline settings (STAR+Salmon, STAR+RSEM, STAR+...

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Bibliographic Details
Published inNAR genomics and bioinformatics Vol. 6; no. 1; p. lqae020
Main Authors Perelo, Louisa Wessels, Gabernet, Gisela, Straub, Daniel, Nahnsen, Sven
Format Journal Article
LanguageEnglish
Published England Oxford University Press 01.03.2024
Subjects
Comparative analysis
Editor's Choice
Exons
Genes
Isoforms
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