Transitions between biomes are common and directional in Bombacoideae (Malvaceae)

Aim To quantify evolutionary transitions between tropical evergreen rain forest and seasonally dry biomes, to test whether biome transitions affect lineage diversification and to examine the robustness of these results to methodological choices. Location The tropics. Time period The Cenozoic. Major...

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Published inJournal of biogeography Vol. 47; no. 6; pp. 1310 - 1321
Main Authors Zizka, Alexander, Carvalho‐Sobrinho, Jefferson G., Pennington, R. Toby, Queiroz, Luciano P., Alcantara, Suzana, Baum, David A., Bacon, Christine D., Antonelli, Alexandre
Format Journal Article
LanguageEnglish
Published Oxford Wiley Subscription Services, Inc 01.06.2020
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ISSN0305-0270
1365-2699
DOI10.1111/jbi.13815

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Abstract Aim To quantify evolutionary transitions between tropical evergreen rain forest and seasonally dry biomes, to test whether biome transitions affect lineage diversification and to examine the robustness of these results to methodological choices. Location The tropics. Time period The Cenozoic. Major taxa studied The plant subfamily Bombacoideae (Malvaceae). Methods We inferred ancestral biomes based on a fossil‐dated molecular phylogeny of 103 species (59% of the clade) and recorded the number of transitions among biomes using biogeographical stochastic mapping based on the dispersal‐extinction‐cladogenesis model. We then estimated diversification rates using state‐specific speciation and extinction rate (SSE) methods. Furthermore, we tested the sensitivity of the results to model choice, phylogenetic uncertainty, measurement error and biome definition. Results We found numerous transitions from evergreen rain forest to seasonally dry biomes, and fewer in the opposite direction. These results were robust to methodological choices. Biome type did not influence diversification rates, although this result was subject to uncertainty, especially related to model choice and biome definition. Main conclusions Our results contradict the idea of evolutionary biome conservatism in Bombacoideae, and support previous findings that evergreen rain forests serve as a source for the flora of seasonally dry biomes. The impact of biome classification and biome definition on the results suggest caution when using a biome concept for biogeographical reconstruction and diversification rate analysis.
AbstractList Aim To quantify evolutionary transitions between tropical evergreen rain forest and seasonally dry biomes, to test whether biome transitions affect lineage diversification and to examine the robustness of these results to methodological choices. Location The tropics. Time period The Cenozoic. Major taxa studied The plant subfamily Bombacoideae (Malvaceae). Methods We inferred ancestral biomes based on a fossil-dated molecular phylogeny of 103 species (59% of the clade) and recorded the number of transitions among biomes using biogeographical stochastic mapping based on the dispersal-extinction-cladogenesis model. We then estimated diversification rates using state-specific speciation and extinction rate (SSE) methods. Furthermore, we tested the sensitivity of the results to model choice, phylogenetic uncertainty, measurement error and biome definition. Results We found numerous transitions from evergreen rain forest to seasonally dry biomes, and fewer in the opposite direction. These results were robust to methodological choices. Biome type did not influence diversification rates, although this result was subject to uncertainty, especially related to model choice and biome definition. Main conclusions Our results contradict the idea of evolutionary biome conservatism in Bombacoideae, and support previous findings that evergreen rain forests serve as a source for the flora of seasonally dry biomes. The impact of biome classification and biome definition on the results suggest caution when using a biome concept for biogeographical reconstruction and diversification rate analysis.
AimTo quantify evolutionary transitions between tropical evergreen rain forest and seasonally dry biomes, to test whether biome transitions affect lineage diversification and to examine the robustness of these results to methodological choices.LocationThe tropics.Time periodThe Cenozoic.Major taxa studiedThe plant subfamily Bombacoideae (Malvaceae).MethodsWe inferred ancestral biomes based on a fossil‐dated molecular phylogeny of 103 species (59% of the clade) and recorded the number of transitions among biomes using biogeographical stochastic mapping based on the dispersal‐extinction‐cladogenesis model. We then estimated diversification rates using state‐specific speciation and extinction rate (SSE) methods. Furthermore, we tested the sensitivity of the results to model choice, phylogenetic uncertainty, measurement error and biome definition.ResultsWe found numerous transitions from evergreen rain forest to seasonally dry biomes, and fewer in the opposite direction. These results were robust to methodological choices. Biome type did not influence diversification rates, although this result was subject to uncertainty, especially related to model choice and biome definition.Main conclusionsOur results contradict the idea of evolutionary biome conservatism in Bombacoideae, and support previous findings that evergreen rain forests serve as a source for the flora of seasonally dry biomes. The impact of biome classification and biome definition on the results suggest caution when using a biome concept for biogeographical reconstruction and diversification rate analysis.
Aim To quantify evolutionary transitions between tropical evergreen rain forest and seasonally dry biomes, to test whether biome transitions affect lineage diversification and to examine the robustness of these results to methodological choices. Location The tropics. Time period The Cenozoic. Major taxa studied The plant subfamily Bombacoideae (Malvaceae). Methods We inferred ancestral biomes based on a fossil‐dated molecular phylogeny of 103 species (59% of the clade) and recorded the number of transitions among biomes using biogeographical stochastic mapping based on the dispersal‐extinction‐cladogenesis model. We then estimated diversification rates using state‐specific speciation and extinction rate (SSE) methods. Furthermore, we tested the sensitivity of the results to model choice, phylogenetic uncertainty, measurement error and biome definition. Results We found numerous transitions from evergreen rain forest to seasonally dry biomes, and fewer in the opposite direction. These results were robust to methodological choices. Biome type did not influence diversification rates, although this result was subject to uncertainty, especially related to model choice and biome definition. Main conclusions Our results contradict the idea of evolutionary biome conservatism in Bombacoideae, and support previous findings that evergreen rain forests serve as a source for the flora of seasonally dry biomes. The impact of biome classification and biome definition on the results suggest caution when using a biome concept for biogeographical reconstruction and diversification rate analysis.
Author Bacon, Christine D.
Alcantara, Suzana
Baum, David A.
Zizka, Alexander
Carvalho‐Sobrinho, Jefferson G.
Antonelli, Alexandre
Pennington, R. Toby
Queiroz, Luciano P.
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Snippet Aim To quantify evolutionary transitions between tropical evergreen rain forest and seasonally dry biomes, to test whether biome transitions affect lineage...
AimTo quantify evolutionary transitions between tropical evergreen rain forest and seasonally dry biomes, to test whether biome transitions affect lineage...
AIM: To quantify evolutionary transitions between tropical evergreen rain forest and seasonally dry biomes, to test whether biome transitions affect lineage...
Aim To quantify evolutionary transitions between tropical evergreen rain forest and seasonally dry biomes, to test whether biome transitions affect lineage...
SourceID swepub
proquest
crossref
wiley
SourceType Open Access Repository
Aggregation Database
Enrichment Source
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StartPage 1310
SubjectTerms biodiversity
biogeography
Biologi
Biological evolution
Biological Sciences
biome connectivity
biome shift
Cenozoic
Cenozoic era
Coniferous forests
Dispersal
Diversification
Ecosystems
Environmental Sciences & Ecology
evolutionary
Extinction
Flora
geographical distribution
Malvaceae
Mapping
niche conservatism
Phylogeny
Physical Geography
proteaceae
Rain
rain forest
rain forests
Rainforests
seasonality
seasonally dry
seasonally dry biomes
shifts
Speciation
Species extinction
species richness
tropical biodiversity
Tropical environments
Uncertainty
Title Transitions between biomes are common and directional in Bombacoideae (Malvaceae)
URI https://onlinelibrary.wiley.com/doi/abs/10.1111%2Fjbi.13815
https://www.proquest.com/docview/2407484137
https://www.proquest.com/docview/2552021041
https://gup.ub.gu.se/publication/294107
Volume 47
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