Challenges and lessons learned from digitizing small Brazilian herbaria
ABSTRACT The digital era provides new opportunities for taxonomists, as well as for everyone that studies biodiversity. Many herbaria have been able to digitize their collections, a process that started with the typing of label data, moving more recently towards the digitization of each sample with...
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Published in | Acta Botânica Brasílica Vol. 35; no. 4; pp. 689 - 697 |
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Main Authors | , , , , |
Format | Journal Article |
Language | English |
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Sociedade Botânica do Brasil
01.12.2021
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Abstract | ABSTRACT The digital era provides new opportunities for taxonomists, as well as for everyone that studies biodiversity. Many herbaria have been able to digitize their collections, a process that started with the typing of label data, moving more recently towards the digitization of each sample with the simultaneous acquisition of high-resolution images. Here we discuss some of the challenges we faced in digitizing samples and provide a series of suggestions to avoid common mistakes for herbaria that have yet to start the process. We used a professional camera, database management software, and a barcode scanner to digitize the collections of herbaria CRI, ECT, FURB, LUSC, and UFRN. Pre-revision of samples with prior restoration when needed, barcode fixation, and a good database allowed faster digitization of samples. Good database software and the formation of a network among small herbaria accelerated digitization and increased the number of images available of Brazilian biodiversity. Thus far, our joint efforts made 118,000 specimen images available online with the purpose of accelerating botanical research. |
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AbstractList | ABSTRACT The digital era provides new opportunities for taxonomists, as well as for everyone that studies biodiversity. Many herbaria have been able to digitize their collections, a process that started with the typing of label data, moving more recently towards the digitization of each sample with the simultaneous acquisition of high-resolution images. Here we discuss some of the challenges we faced in digitizing samples and provide a series of suggestions to avoid common mistakes for herbaria that have yet to start the process. We used a professional camera, database management software, and a barcode scanner to digitize the collections of herbaria CRI, ECT, FURB, LUSC, and UFRN. Pre-revision of samples with prior restoration when needed, barcode fixation, and a good database allowed faster digitization of samples. Good database software and the formation of a network among small herbaria accelerated digitization and increased the number of images available of Brazilian biodiversity. Thus far, our joint efforts made 118,000 specimen images available online with the purpose of accelerating botanical research. |
Author | Heiden, Gustavo Forzza, Rafaela C. Leitman, Paula M. Versieux, Leonardo M. Gasper, André Luís de |
Author_xml | – sequence: 1 givenname: André Luís de orcidid: 0000-0002-1940-9581 surname: Gasper fullname: Gasper, André Luís de organization: Universidade Regional de Blumenau, Brazil – sequence: 2 givenname: Gustavo orcidid: 0000-0002-0046-6500 surname: Heiden fullname: Heiden, Gustavo organization: Embrapa Clima Temperado, Brazil – sequence: 3 givenname: Leonardo M. orcidid: 0000-0003-1560-3691 surname: Versieux fullname: Versieux, Leonardo M. organization: Universidade Federal do Rio Grande do Norte, Brazil – sequence: 4 givenname: Paula M. orcidid: 0000-0002-2997-3784 surname: Leitman fullname: Leitman, Paula M. organization: Jardim Botânico do Rio de Janeiro, Brazil – sequence: 5 givenname: Rafaela C. orcidid: 0000-0002-7035-9313 surname: Forzza fullname: Forzza, Rafaela C. organization: Jardim Botânico do Rio de Janeiro, Brazil |
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Title | Challenges and lessons learned from digitizing small Brazilian herbaria |
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