Assessing molecular initiating events (MIEs), key events (KEs) and modulating factors (MFs) for styrene responses in mouse lungs using whole genome gene expression profiling following 1-day and multi-week exposures

Styrene increased lung tumors in mice at chronic inhalation exposures of 20ppm and greater. MIEs, KEs and MFs were examined using gene expression in three strains of male mice (the parental C57BL/6 strain, a CYP2F2(−/−) knock out and a CYP2F2(−/−) transgenic containing human CYP2F1, 2A13 and 2B6). E...

Full description

Saved in:
Bibliographic Details
Published inToxicology and applied pharmacology Vol. 335; pp. 28 - 40
Main Authors Andersen, Melvin E., Cruzan, George, Black, Michael B., Pendse, Salil N., Dodd, Darol, Bus, James S., Sarang, Satinder S., Banton, Marcy I., Waites, Robbie, McMullen, Patrick D.
Format Journal Article
LanguageEnglish
Published United States Elsevier Inc 15.11.2017
Subjects
Online AccessGet full text

Cover

Loading…
Abstract Styrene increased lung tumors in mice at chronic inhalation exposures of 20ppm and greater. MIEs, KEs and MFs were examined using gene expression in three strains of male mice (the parental C57BL/6 strain, a CYP2F2(−/−) knock out and a CYP2F2(−/−) transgenic containing human CYP2F1, 2A13 and 2B6). Exposures were for 1-day and 1, 4 and 26weeks. After 1-day exposures at 1, 5, 10, 20, 40 and 120ppm significant increases in differentially expressed genes (DEGs) occurred only in parental strain lungs where there was already an increase in DEGs at 5ppm and then many thousands of DEGs by 120ppm. Enrichment for 1-day and 1-week exposures included cell cycle, mitotic M-M/G1 phases, DNA-synthesis and metabolism of lipids and lipoproteins pathways. The numbers of DEGs decreased steadily over time with no DEGs meeting both statistical significance and fold-change criteria at 26weeks. At 4 and 26weeks, some key transcription factors (TFs) - Nr1d1, Nr1d2, Dbp, Tef, Hlf, Per3, Per2 and Bhlhe40 - were upregulated (|FC|>1.5), while others - Npas, Arntl, Nfil3, Nr4a1, Nr4a2, and Nr4a3 - were down-regulated. At all times, consistent changes in gene expression only occurred in the parental strain. Our results support a MIE for styrene of direct mitogenicity from mouse-specific CYP2F2-mediated metabolites activating Nr4a signaling. Longer-term MFs include down-regulation of Nr4a genes and shifts in both circadian clock TFs and other TFs, linking circadian clock to cellular metabolism. We found no gene expression changes indicative of cytotoxicity or activation of p53-mediated DNA-damage pathways. •Styrene response consistent with direct mitogenicity of Cyp2F2 and Nr4a signaling•Longer term exposure show changes in circadian pathways.•Changes in circadian pathways associated with Nr4a receptor family down-regulation•Consistent changes were seen only in wild type mice.•No evidence of activation of p53-mediated DNA-damage or cell stress pathways
AbstractList Styrene increased lung tumors in mice at chronic inhalation exposures of 20ppm and greater. MIEs, KEs and MFs were examined using gene expression in three strains of male mice (the parental C57BL/6 strain, a CYP2F2(−/−) knock out and a CYP2F2(−/−) transgenic containing human CYP2F1, 2A13 and 2B6). Exposures were for 1-day and 1, 4 and 26weeks. After 1-day exposures at 1, 5, 10, 20, 40 and 120ppm significant increases in differentially expressed genes (DEGs) occurred only in parental strain lungs where there was already an increase in DEGs at 5ppm and then many thousands of DEGs by 120ppm. Enrichment for 1-day and 1-week exposures included cell cycle, mitotic M-M/G1 phases, DNA-synthesis and metabolism of lipids and lipoproteins pathways. The numbers of DEGs decreased steadily over time with no DEGs meeting both statistical significance and fold-change criteria at 26weeks. At 4 and 26weeks, some key transcription factors (TFs) - Nr1d1, Nr1d2, Dbp, Tef, Hlf, Per3, Per2 and Bhlhe40 - were upregulated (|FC|>1.5), while others - Npas, Arntl, Nfil3, Nr4a1, Nr4a2, and Nr4a3 - were down-regulated. At all times, consistent changes in gene expression only occurred in the parental strain. Our results support a MIE for styrene of direct mitogenicity from mouse-specific CYP2F2-mediated metabolites activating Nr4a signaling. Longer-term MFs include down-regulation of Nr4a genes and shifts in both circadian clock TFs and other TFs, linking circadian clock to cellular metabolism. We found no gene expression changes indicative of cytotoxicity or activation of p53-mediated DNA-damage pathways. •Styrene response consistent with direct mitogenicity of Cyp2F2 and Nr4a signaling•Longer term exposure show changes in circadian pathways.•Changes in circadian pathways associated with Nr4a receptor family down-regulation•Consistent changes were seen only in wild type mice.•No evidence of activation of p53-mediated DNA-damage or cell stress pathways
Styrene increased lung tumors in mice at chronic inhalation exposures of 20ppm and greater. MIEs, KEs and MFs were examined using gene expression in three strains of male mice (the parental C57BL/6 strain, a CYP2F2(-/-) knock out and a CYP2F2(-/-) transgenic containing human CYP2F1, 2A13 and 2B6). Exposures were for 1-day and 1, 4 and 26weeks. After 1-day exposures at 1, 5, 10, 20, 40 and 120ppm significant increases in differentially expressed genes (DEGs) occurred only in parental strain lungs where there was already an increase in DEGs at 5ppm and then many thousands of DEGs by 120ppm. Enrichment for 1-day and 1-week exposures included cell cycle, mitotic M-M/G1 phases, DNA-synthesis and metabolism of lipids and lipoproteins pathways. The numbers of DEGs decreased steadily over time with no DEGs meeting both statistical significance and fold-change criteria at 26weeks. At 4 and 26weeks, some key transcription factors (TFs) - Nr1d1, Nr1d2, Dbp, Tef, Hlf, Per3, Per2 and Bhlhe40 - were upregulated (|FC|>1.5), while others - Npas, Arntl, Nfil3, Nr4a1, Nr4a2, and Nr4a3 - were down-regulated. At all times, consistent changes in gene expression only occurred in the parental strain. Our results support a MIE for styrene of direct mitogenicity from mouse-specific CYP2F2-mediated metabolites activating Nr4a signaling. Longer-term MFs include down-regulation of Nr4a genes and shifts in both circadian clock TFs and other TFs, linking circadian clock to cellular metabolism. We found no gene expression changes indicative of cytotoxicity or activation of p53-mediated DNA-damage pathways.
Author Andersen, Melvin E.
Cruzan, George
Dodd, Darol
Bus, James S.
Sarang, Satinder S.
Black, Michael B.
Banton, Marcy I.
Pendse, Salil N.
Waites, Robbie
McMullen, Patrick D.
Author_xml – sequence: 1
  givenname: Melvin E.
  surname: Andersen
  fullname: Andersen, Melvin E.
  organization: ScitoVation LLC, Six Davis Drive, PO Box 12878, Research Triangle Park, NC 27709, United States
– sequence: 2
  givenname: George
  surname: Cruzan
  fullname: Cruzan, George
  organization: ToxWorks, 1153 Roadstown Road, Bridgeton, NJ 08302, United States
– sequence: 3
  givenname: Michael B.
  orcidid: 0000-0002-7314-5441
  surname: Black
  fullname: Black, Michael B.
  email: mblack@scitovation.com
  organization: ScitoVation LLC, Six Davis Drive, PO Box 12878, Research Triangle Park, NC 27709, United States
– sequence: 4
  givenname: Salil N.
  surname: Pendse
  fullname: Pendse, Salil N.
  organization: ScitoVation LLC, Six Davis Drive, PO Box 12878, Research Triangle Park, NC 27709, United States
– sequence: 5
  givenname: Darol
  surname: Dodd
  fullname: Dodd, Darol
  organization: Charles River, 640 N. Elizabeth St., Spencerville, OH 45887, United States
– sequence: 6
  givenname: James S.
  surname: Bus
  fullname: Bus, James S.
  organization: Exponent Inc., 5806 Woodberry Drive, Midland, MI 48640, United States
– sequence: 7
  givenname: Satinder S.
  surname: Sarang
  fullname: Sarang, Satinder S.
  organization: Shell International, 910 Louisiana Street, Houston, TX 77002, United States
– sequence: 8
  givenname: Marcy I.
  surname: Banton
  fullname: Banton, Marcy I.
  organization: Lyondell Chemical Company, Houston, TX 77010, United States
– sequence: 9
  givenname: Robbie
  surname: Waites
  fullname: Waites, Robbie
  organization: SABIC Innovative Plastics US LLC, Mount Vernon, IN 47620, United States
– sequence: 10
  givenname: Patrick D.
  surname: McMullen
  fullname: McMullen, Patrick D.
  organization: ScitoVation LLC, Six Davis Drive, PO Box 12878, Research Triangle Park, NC 27709, United States
BackLink https://www.ncbi.nlm.nih.gov/pubmed/28951217$$D View this record in MEDLINE/PubMed
BookMark eNp9kcFu1DAQhi1URLeFF-CAfKRSE8ZONhtLXKqqLRVFXEDiZjn2ZPE2a0e202VflOfB2YUekSyNNZ7v_0f-z8iJ8w4JecugZMCaD5syKTWWHNiqBFECW74gCwaiKaCqqhOyAKhZAdD-OCVnMW4AQNQ1e0VOeSuWjLPVgvy-ihFjtG5Nt35APQ0qUOtssirNTXxClyJ9_-X-Jl5c0kfcP7c-5w5VzmTQZOww3iudfJjnb_Nj7wONaR_QIQ0YR--yV1bPxBSRDpNbRzodzHc_sztdo_PbQ0GKv8Ywb-YdHYPv7XDQ98Pgd_ONFUbtj_bTkGyxQ3ycGR-njL0mL3s1RHzzt56T77c3364_FQ9f7-6vrx4KXQOkoqlqzioheMcVGl4pA1Xb8K6rddvVrVjhqhYdGsYVM6yHflmxRlSQT6N0_uRzwo-6OvgYA_ZyDHarwl4ykHNIciPnkOQckgQhc0gZeneExqnbonlG_qWSBz4eBzCv_mQxyKgtOo3GBtRJGm__p_8HWHupRA
CitedBy_id crossref_primary_10_1016_j_tiv_2022_105311
crossref_primary_10_1080_10937404_2020_1763879
crossref_primary_10_1016_j_mrrev_2021_108364
crossref_primary_10_1016_j_jbi_2022_104053
crossref_primary_10_1016_j_yrtph_2018_02_010
crossref_primary_10_1093_toxsci_kfz243
crossref_primary_10_1016_j_aquatox_2018_05_026
crossref_primary_10_3389_fphar_2018_01072
crossref_primary_10_1080_08958378_2019_1621966
crossref_primary_10_1016_j_cotox_2018_05_003
crossref_primary_10_1016_j_taap_2024_117013
crossref_primary_10_1093_toxsci_kfaa020
crossref_primary_10_1016_j_yrtph_2021_104977
crossref_primary_10_1016_j_dib_2021_107420
crossref_primary_10_1016_j_yrtph_2018_05_011
crossref_primary_10_1002_1873_3468_13294
crossref_primary_10_1007_s11356_019_07466_z
crossref_primary_10_3389_fmars_2018_00071
crossref_primary_10_1016_j_envpol_2020_115160
crossref_primary_10_1080_10408444_2024_2310600
crossref_primary_10_1002_jgm_3714
crossref_primary_10_3389_fphar_2019_00232
crossref_primary_10_1016_j_tiv_2019_02_017
crossref_primary_10_1080_10937404_2019_1633718
Cites_doi 10.1016/j.yrtph.2009.07.002
10.1158/0008-5472.CAN-09-3160
10.1097/EDE.0b013e318281a30f
10.1016/0041-008X(84)90065-6
10.1016/S0009-2797(01)00236-8
10.3109/10799893.2014.948555
10.1016/j.toxlet.2004.02.004
10.1073/pnas.1408886111
10.1080/009841096161339
10.1016/j.tem.2006.11.005
10.1016/j.jsbmb.2015.04.016
10.1093/nar/gku955
10.1006/rtph.1997.1161
10.1016/B978-0-12-396971-2.00009-9
10.1016/0272-0590(92)90136-6
10.1093/biostatistics/4.2.249
10.1093/toxsci/46.2.266
10.1093/toxsci/53.2.159
10.1016/j.yrtph.2013.02.008
10.1210/en.2008-0638
10.1016/j.cell.2006.06.050
10.1093/toxsci/kfn097
10.1186/1471-2164-8-387
10.1002/jat.737
10.1007/978-3-642-25950-0_15
10.2337/db09-0763
10.1016/j.cmet.2016.07.001
10.1016/j.bpj.2014.07.022
10.1016/j.cmet.2006.04.015
10.1080/08958370290084647
10.1016/j.bbamem.2003.11.012
10.1093/toxsci/kfq303
10.1016/S0300-483X(01)00488-7
10.5271/sjweh.2730
10.1016/j.yrtph.2011.10.007
10.1016/j.taap.2017.04.002
10.1016/j.yrtph.2015.07.017
10.1101/gad.301404
10.1038/ng1504
10.1097/JOM.0b013e3181ad49b2
10.1210/me.2010-0015
10.1093/toxsci/kfm092
10.1016/j.cbi.2013.11.006
10.1080/10635150490522304
10.1038/npp.2016.253
10.1080/15287390590890464
10.1006/rtph.2002.1545
10.1016/0041-008X(84)90064-4
10.1006/faat.1996.2273
10.1007/s00204-016-1824-6
10.1093/toxsci/kfp233
ContentType Journal Article
Copyright 2017 The Authors
Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.
Copyright_xml – notice: 2017 The Authors
– notice: Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.
DBID 6I.
AAFTH
CGR
CUY
CVF
ECM
EIF
NPM
AAYXX
CITATION
DOI 10.1016/j.taap.2017.09.015
DatabaseName ScienceDirect Open Access Titles
Elsevier:ScienceDirect:Open Access
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
CrossRef
DatabaseTitle MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
CrossRef
DatabaseTitleList
MEDLINE
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
DeliveryMethod fulltext_linktorsrc
Discipline Public Health
Pharmacy, Therapeutics, & Pharmacology
EISSN 1096-0333
EndPage 40
ExternalDocumentID 10_1016_j_taap_2017_09_015
28951217
S0041008X17303873
Genre Research Support, Non-U.S. Gov't
Journal Article
GroupedDBID ---
--K
--M
.~1
0R~
123
1B1
1RT
1~.
1~5
4.4
457
4G.
5RE
5VS
6I.
7-5
71M
8P~
9JM
AABNK
AACTN
AAEDT
AAEDW
AAFTH
AAIAV
AAIKC
AAIKJ
AAKOC
AALRI
AAMNW
AAOAW
AAQFI
AATCM
AAXUO
ABFRF
ABFYP
ABJNI
ABLST
ABMAC
ABYKQ
ABZDS
ACDAQ
ACGFO
ACGFS
ACRLP
ADBBV
ADEZE
AEBSH
AEFWE
AEKER
AENEX
AFKWA
AFTJW
AFXIZ
AGHFR
AGUBO
AGYEJ
AHEUO
AIEXJ
AIKHN
AITUG
AJBFU
AJOXV
AKIFW
ALCLG
ALMA_UNASSIGNED_HOLDINGS
AMFUW
AMRAJ
AXJTR
BKOJK
BLECG
BLXMC
C45
CS3
DM4
EBS
EFBJH
EFLBG
EJD
EO8
EO9
EP2
EP3
F5P
FDB
FIRID
FNPLU
FYGXN
G-Q
GBLVA
IHE
J1W
KCYFY
KOM
LG5
M33
M41
MO0
N9A
O-L
O9-
OAUVE
OGGZJ
OVD
OZT
P-8
P-9
P2P
PC.
Q38
RIG
ROL
RPZ
SDF
SDG
SDP
SES
SPCBC
SSJ
SSP
SSZ
T5K
TEORI
TWZ
WH7
ZU3
~G-
AAXKI
AKRWK
CGR
CUY
CVF
ECM
EIF
NPM
.55
.GJ
.HR
29Q
3O-
53G
AAQXK
AAYXX
ABEFU
ABFNM
ABXDB
ADFGL
ADMUD
AFFNX
AFJKZ
AHHHB
ASPBG
AVWKF
AZFZN
CAG
CITATION
COF
FEDTE
FGOYB
G-2
HMT
HVGLF
HZ~
R2-
SEW
SPT
UHS
WUQ
X7M
XJT
XPP
Y6R
YCJ
ZGI
ZKB
ZMT
ZXP
~KM
ID FETCH-LOGICAL-c400t-634213992b2aed23ad03862bb4c8b4897e749bed12a1d1f0f53169309306ac333
IEDL.DBID .~1
ISSN 0041-008X
IngestDate Thu Sep 26 19:22:26 EDT 2024
Sat Sep 28 08:49:10 EDT 2024
Fri Feb 23 02:29:39 EST 2024
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Keywords Molecular initiating events
Styrene inhalation
MIEs
Mouse lung tumors
Nr4 family gene downregulation
Adaptation and modulating factors
Language English
License This is an open access article under the CC BY-NC-ND license.
Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c400t-634213992b2aed23ad03862bb4c8b4897e749bed12a1d1f0f53169309306ac333
ORCID 0000-0002-7314-5441
OpenAccessLink https://www.sciencedirect.com/science/article/pii/S0041008X17303873
PMID 28951217
PageCount 13
ParticipantIDs crossref_primary_10_1016_j_taap_2017_09_015
pubmed_primary_28951217
elsevier_sciencedirect_doi_10_1016_j_taap_2017_09_015
PublicationCentury 2000
PublicationDate 2017-11-15
PublicationDateYYYYMMDD 2017-11-15
PublicationDate_xml – month: 11
  year: 2017
  text: 2017-11-15
  day: 15
PublicationDecade 2010
PublicationPlace United States
PublicationPlace_xml – name: United States
PublicationTitle Toxicology and applied pharmacology
PublicationTitleAlternate Toxicol Appl Pharmacol
PublicationYear 2017
Publisher Elsevier Inc
Publisher_xml – name: Elsevier Inc
References US_NTP (bb0260) 1986
Carlson (bb0055) 2004; 150
Andersen, Clewell, Bermudez, Willson, Thomas (bb0020) 2008; 105
Yang, Downes, Yu, Bookout, He, Straume, Mangelsdorf, Evans (bb0265) 2006; 126
Pearen, Muscat (bb0195) 2010; 24
Turunen, Olsson, Dallner (bb0250) 2004; 1660
Bridi, Hawk, Chatterjee, Safe, Abel (bb0050) 2017; 42
Irizarry, Hobbs, Collin, Beazer-Barclay, Antonellis, Scherf, Speed (bb0160) 2003; 4
Gachon, Olela, Schaad, Descombes, Schibler (bb0125) 2006; 4
Kohsaka, Bass (bb0170) 2007; 18
Pendse (bb0200) 2014
Ranhotra (bb0225) 2015; 35
Cruzan, Bus, Banton, Gingell, Carlson (bb0090) 2009; 55
Ramsey, Andersen (bb0215) 1984; 73
Igarashi, Nakatsu, Yamashita, Ono, Ohno, Urushidani, Yamada (bb0155) 2015; 43
Andersen, Black, Campbell, Pendse, Clewell Iii, Pottenger, Bus, Dodd, Kemp, McMullen (bb0030) 2017; 332
Black, Dodd, McMullen, Pendse, MacGregor, Gollapudi, Andersen (bb0040) 2015; 73
Akaike (bb0005) 1973
Cruzan, Bus, Banton, Sarang, Waites, Layko, Raymond, Dodd, Andersen (bb0105) 2017; 00
Cruzan, Cushman, Andrews, Granville, Miller, Hardy, Coombs, Mullins (bb0070) 1997; 35
Cruzan, Cushman, Andrews, Granville, Johnson, Hardy, Coombs, Mullins, Brown (bb1236) 1998; 46
Gibbs, Beesley, Plumb, Singh, Farrow, Ray, Loudon (bb0135) 2009; 150
Jolley, Ukai-Tadenuma, Perrin, Ueda (bb0165) 2014; 107
Gachon, Fonjallaz, Damiola, Gos, Kodama, Zakany, Duboule, Petit, Tafti, Schibler (bb0120) 2004; 18
McMullen, Bhattacharya, Woods, Sun, Yarborough, Ross, Miller, McBride, LeCluyse, Clewell, Andersen (bb0180) 2014; 209
Thomas, Bao, Chu, Bessarabova, Nikolskaya, Nikolsky, Andersen, Wolfinger (bb0245) 2009; 112
Papagiannakopoulos, Bauer, Davidson, Heimann, Subbaraj, Bhutkar, Bartlebaugh, Vander Heiden, Jacks (bb0190) 2016; 24
Ueda, Hayashi, Chen, Sano, Machida, Shigeyoshi, Iino, Hashimoto (bb0255) 2005; 37
Safe, Jin, Morpurgo, Abudayyeh, Singh, Tjalkens (bb0230) 2016; 157
Andersen, Gargas, Ramsey (bb0010) 1984; 73
Cruzan, Bus, Hotchkiss, Sura, Moore, Yost, Banton, Sarang (bb0100) 2013; 66
Pendse, Maertens, Rosenberg, Roy, Fasani, Vantangoli, Madnick, Boekelheide, Fornace, Odwin, Yager, Hartung, Andersen, McMullen (bb0205) 2017; 91
Yang, Allen, Thomas (bb0270) 2007; 8
Green, Lee, Toghill, Meadowcroft, Lund, Foster (bb0145) 2001; 137
Chao, Wroblewski, Zhang, Pei, Vergnes, Ilkayeva, Ding, Reue, Watt, Newgard, Pilch, Hevener, Tontonoz (bb0060) 2009; 58
Boffetta, Adami, Cole, Trichopoulos, Mandel (bb0045) 2009; 51
Andersen, Meek, Boorman, Brusick, Cohen, Dragan, Frederick, Goodman, Hard, O'Flaherty, Robinson (bb0015) 2000; 53
Foster, Green, Smith, Lewis, Hext, Wyatt (bb0110) 1992; 18
Liu, Zeng, Zhang, Zhan, Chen, Wang, Wang, Xiang, Liu, Wang, Chen, Shen, Su, Huang, Zhang, Wu (bb0175) 2010; 70
Zhang, Lahens, Ballance, Hughes, Hogenesch (bb0275) 2014; 111
Cruzan, Carlson, Turner, Mellert (bb0085) 2005; 68
Sarangapani, Teeguarden, Cruzan, Clewell, Andersen (bb0235) 2002; 14
Benjamini, Hochberg (bb0035) 1995; 57
Ramsey, Young (bb0220) 1978; 4
Green, Toghill, Foster (bb0150) 2001; 169
Andersen, Clewell, Bermudez, Dodd, Willson, Campbell, Thomas (bb0025) 2010; 118
Posada, Buckley (bb0210) 2004; 53
Gadberry, DeNicola, Carlson (bb0130) 1996; 48
Thomas, Allen, Nong, Yang, Bermudez, Clewell, Andersen (bb0240) 2007; 98
Golden, Holm, Robinson, Julkunen, Reese (bb0140) 1997; 26
Fu, Kettner (bb0115) 2013; 119
Cruzan, Bus, Hotchkiss, Harkema, Banton, Sarang (bb0095) 2012; 62
Cruzan, Cushman, Andrews, Granville, Johnson, Bevan, Hardy, Coombs, Mullins, Brown (bb0075) 2001; 21
Cruzan, Carlson, Johnson, Andrews, Banton, Bevan, Cushman (bb0080) 2002; 35
Minami, Ode, Ueda (bb0185) 2013
Collins, Bodner, Bus (bb0065) 2013; 24
Cruzan (10.1016/j.taap.2017.09.015_bb0100) 2013; 66
Yang (10.1016/j.taap.2017.09.015_bb0270) 2007; 8
Liu (10.1016/j.taap.2017.09.015_bb0175) 2010; 70
Black (10.1016/j.taap.2017.09.015_bb0040) 2015; 73
Pearen (10.1016/j.taap.2017.09.015_bb0195) 2010; 24
Minami (10.1016/j.taap.2017.09.015_bb0185) 2013
Irizarry (10.1016/j.taap.2017.09.015_bb0160) 2003; 4
Ranhotra (10.1016/j.taap.2017.09.015_bb0225) 2015; 35
Gadberry (10.1016/j.taap.2017.09.015_bb0130) 1996; 48
Ramsey (10.1016/j.taap.2017.09.015_bb0215) 1984; 73
McMullen (10.1016/j.taap.2017.09.015_bb0180) 2014; 209
Cruzan (10.1016/j.taap.2017.09.015_bb0095) 2012; 62
Kohsaka (10.1016/j.taap.2017.09.015_bb0170) 2007; 18
Thomas (10.1016/j.taap.2017.09.015_bb0245) 2009; 112
Gachon (10.1016/j.taap.2017.09.015_bb0125) 2006; 4
Zhang (10.1016/j.taap.2017.09.015_bb0275) 2014; 111
Thomas (10.1016/j.taap.2017.09.015_bb0240) 2007; 98
Collins (10.1016/j.taap.2017.09.015_bb0065) 2013; 24
Andersen (10.1016/j.taap.2017.09.015_bb0015) 2000; 53
Andersen (10.1016/j.taap.2017.09.015_bb0010) 1984; 73
Benjamini (10.1016/j.taap.2017.09.015_bb0035) 1995; 57
Igarashi (10.1016/j.taap.2017.09.015_bb0155) 2015; 43
Papagiannakopoulos (10.1016/j.taap.2017.09.015_bb0190) 2016; 24
Akaike (10.1016/j.taap.2017.09.015_bb0005) 1973
Andersen (10.1016/j.taap.2017.09.015_bb0020) 2008; 105
Foster (10.1016/j.taap.2017.09.015_bb0110) 1992; 18
Gibbs (10.1016/j.taap.2017.09.015_bb0135) 2009; 150
Andersen (10.1016/j.taap.2017.09.015_bb0025) 2010; 118
Cruzan (10.1016/j.taap.2017.09.015_bb1236) 1998; 46
Fu (10.1016/j.taap.2017.09.015_bb0115) 2013; 119
Safe (10.1016/j.taap.2017.09.015_bb0230) 2016; 157
Andersen (10.1016/j.taap.2017.09.015_bb0030) 2017; 332
Chao (10.1016/j.taap.2017.09.015_bb0060) 2009; 58
Carlson (10.1016/j.taap.2017.09.015_bb0055) 2004; 150
Cruzan (10.1016/j.taap.2017.09.015_bb0075) 2001; 21
Boffetta (10.1016/j.taap.2017.09.015_bb0045) 2009; 51
Cruzan (10.1016/j.taap.2017.09.015_bb0090) 2009; 55
Ueda (10.1016/j.taap.2017.09.015_bb0255) 2005; 37
Pendse (10.1016/j.taap.2017.09.015_bb0200) 2014
Cruzan (10.1016/j.taap.2017.09.015_bb0080) 2002; 35
Cruzan (10.1016/j.taap.2017.09.015_bb0070) 1997; 35
Cruzan (10.1016/j.taap.2017.09.015_bb0085) 2005; 68
Pendse (10.1016/j.taap.2017.09.015_bb0205) 2017; 91
Jolley (10.1016/j.taap.2017.09.015_bb0165) 2014; 107
Bridi (10.1016/j.taap.2017.09.015_bb0050) 2017; 42
US_NTP (10.1016/j.taap.2017.09.015_bb0260) 1986
Gachon (10.1016/j.taap.2017.09.015_bb0120) 2004; 18
Green (10.1016/j.taap.2017.09.015_bb0145) 2001; 137
Green (10.1016/j.taap.2017.09.015_bb0150) 2001; 169
Ramsey (10.1016/j.taap.2017.09.015_bb0220) 1978; 4
Cruzan (10.1016/j.taap.2017.09.015_bb0105) 2017; 00
Golden (10.1016/j.taap.2017.09.015_bb0140) 1997; 26
Posada (10.1016/j.taap.2017.09.015_bb0210) 2004; 53
Turunen (10.1016/j.taap.2017.09.015_bb0250) 2004; 1660
Yang (10.1016/j.taap.2017.09.015_bb0265) 2006; 126
Sarangapani (10.1016/j.taap.2017.09.015_bb0235) 2002; 14
References_xml – volume: 24
  start-page: 1891
  year: 2010
  end-page: 1903
  ident: bb0195
  article-title: Minireview: nuclear hormone receptor 4A signaling: implications for metabolic disease
  publication-title: Mol. Endocrinol.
  contributor:
    fullname: Muscat
– volume: 73
  start-page: 339
  year: 2015
  end-page: 347
  ident: bb0040
  article-title: Using gene expression profiling to evaluate cellular responses in mouse lungs exposed to V2O5 and a group of other mouse lung tumorigens and non-tumorigens
  publication-title: Regul. Toxicol. Pharmacol.
  contributor:
    fullname: Andersen
– volume: 4
  start-page: 84
  year: 1978
  end-page: 91
  ident: bb0220
  article-title: Pharmacokinetics of inhaled styrene in rats and humans
  publication-title: Scand. J. Work Environ. Health
  contributor:
    fullname: Young
– start-page: 359
  year: 2013
  end-page: 377
  ident: bb0185
  article-title: Mammalian circadian clock: the roles of transcriptional repression and delay
  publication-title: Handb. Exp. Pharmacol.
  contributor:
    fullname: Ueda
– volume: 111
  start-page: 16219
  year: 2014
  end-page: 16224
  ident: bb0275
  article-title: A circadian gene expression atlas in mammals: implications for biology and medicine
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
  contributor:
    fullname: Hogenesch
– volume: 169
  start-page: 107
  year: 2001
  end-page: 117
  ident: bb0150
  article-title: The role of cytochromes P-450 in styrene induced pulmonary toxicity and carcinogenicity
  publication-title: Toxicology
  contributor:
    fullname: Foster
– volume: 91
  start-page: 1749
  year: 2017
  end-page: 1762
  ident: bb0205
  article-title: Information-dependent enrichment analysis reveals time-dependent transcriptional regulation of the estrogen pathway of toxicity
  publication-title: Arch. Toxicol.
  contributor:
    fullname: McMullen
– volume: 26
  start-page: 142
  year: 1997
  end-page: 155
  ident: bb0140
  article-title: Chloroform mode of action: implications for cancer risk assessment
  publication-title: Regul. Toxicol. Pharmacol.
  contributor:
    fullname: Reese
– volume: 35
  start-page: 184
  year: 2015
  end-page: 188
  ident: bb0225
  article-title: The NR4A orphan nuclear receptors: mediators in metabolism and diseases
  publication-title: J. Recept. Signal Transduct. Res.
  contributor:
    fullname: Ranhotra
– volume: 53
  start-page: 159
  year: 2000
  end-page: 172
  ident: bb0015
  article-title: Lessons learned in applying the U.S. EPA proposed cancer guidelines to specific compounds
  publication-title: Toxicol. Sci.
  contributor:
    fullname: Robinson
– volume: 21
  start-page: 185
  year: 2001
  end-page: 198
  ident: bb0075
  article-title: Chronic toxicity/oncogenicity study of styrene in CD-1 mice by inhalation exposure for 104 weeks
  publication-title: J. Appl. Toxicol.
  contributor:
    fullname: Brown
– volume: 24
  start-page: 324
  year: 2016
  end-page: 331
  ident: bb0190
  article-title: Circadian rhythm disruption promotes lung tumorigenesis
  publication-title: Cell Metab.
  contributor:
    fullname: Jacks
– volume: 105
  start-page: 368
  year: 2008
  end-page: 383
  ident: bb0020
  article-title: Genomic signatures and dose-dependent transitions in nasal epithelial responses to inhaled formaldehyde in the rat
  publication-title: Toxicol. Sci.
  contributor:
    fullname: Thomas
– volume: 55
  start-page: 205
  year: 2009
  end-page: 218
  ident: bb0090
  article-title: Mouse specific lung tumors from CYP2F2-mediated cytotoxic metabolism: an endpoint/toxic response where data from multiple chemicals converge to support a mode of action
  publication-title: Regul. Toxicol. Pharmacol.
  contributor:
    fullname: Carlson
– volume: 53
  start-page: 793
  year: 2004
  end-page: 808
  ident: bb0210
  article-title: Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests
  publication-title: Syst. Biol.
  contributor:
    fullname: Buckley
– volume: 18
  start-page: 376
  year: 1992
  end-page: 388
  ident: bb0110
  article-title: Methylene chloride–an inhalation study to investigate pathological and biochemical events occurring in the lungs of mice over an exposure period of 90 days
  publication-title: Fundam. Appl. Toxicol.
  contributor:
    fullname: Wyatt
– volume: 70
  start-page: 3628
  year: 2010
  end-page: 3637
  ident: bb0175
  article-title: A unique pharmacophore for activation of the nuclear orphan receptor Nur77 in vivo and in vitro
  publication-title: Cancer Res.
  contributor:
    fullname: Wu
– volume: 150
  start-page: 335
  year: 2004
  end-page: 339
  ident: bb0055
  article-title: Comparison of the susceptibility of wild-type and CYP2E1 knockout mice to the hepatotoxic and pneumotoxic effects of styrene and styrene oxide
  publication-title: Toxicol. Lett.
  contributor:
    fullname: Carlson
– volume: 107
  start-page: 1462
  year: 2014
  end-page: 1473
  ident: bb0165
  article-title: A mammalian circadian clock model incorporating daytime expression elements
  publication-title: Biophys. J.
  contributor:
    fullname: Ueda
– volume: 98
  start-page: 240
  year: 2007
  end-page: 248
  ident: bb0240
  article-title: A method to integrate benchmark dose estimates with genomic data to assess the functional effects of chemical exposure
  publication-title: Toxicol. Sci.
  contributor:
    fullname: Andersen
– volume: 42
  start-page: 1243
  year: 2017
  end-page: 1253
  ident: bb0050
  article-title: Pharmacological Activators of the NR4A Nuclear Receptors Enhance LTP in a CREB/CBP-Dependent Manner
  publication-title: Neuropsychopharmacology
  contributor:
    fullname: Abel
– volume: 18
  start-page: 4
  year: 2007
  end-page: 11
  ident: bb0170
  article-title: A sense of time: how molecular clocks organize metabolism
  publication-title: Trends Endocrinol. Metab.
  contributor:
    fullname: Bass
– volume: 150
  start-page: 268
  year: 2009
  end-page: 276
  ident: bb0135
  article-title: Circadian timing in the lung; a specific role for bronchiolar epithelial cells
  publication-title: Endocrinology
  contributor:
    fullname: Loudon
– volume: 18
  start-page: 1397
  year: 2004
  end-page: 1412
  ident: bb0120
  article-title: The loss of circadian PAR bZip transcription factors results in epilepsy
  publication-title: Genes Dev.
  contributor:
    fullname: Schibler
– volume: 43
  start-page: D921
  year: 2015
  end-page: 927
  ident: bb0155
  article-title: Open TG-GATEs: a large-scale toxicogenomics database
  publication-title: Nucleic Acids Res.
  contributor:
    fullname: Yamada
– volume: 112
  start-page: 311
  year: 2009
  end-page: 321
  ident: bb0245
  article-title: Use of short-term transcriptional profiles to assess the long-term cancer-related safety of environmental and industrial chemicals
  publication-title: Toxicol. Sci.
  contributor:
    fullname: Wolfinger
– volume: 8
  start-page: 387
  year: 2007
  ident: bb0270
  article-title: BMDExpress: a software tool for the benchmark dose analyses of genomic data
  publication-title: BMC Genomics
  contributor:
    fullname: Thomas
– year: 1986
  ident: bb0260
  article-title: Toxicology and carcinogenicity studies of dichloromethane (methylene chloride - CAS No. 75-09-2) in F344/N rats and B6C3F1 mice (inhalation studies) National Toxicology Program Technical Report Series No. 309
  contributor:
    fullname: US_NTP
– volume: 24
  start-page: 195
  year: 2013
  end-page: 203
  ident: bb0065
  article-title: Cancer mortality of workers exposed to styrene in the U.S. Reinforced plastics and composite industry
  publication-title: Epidemiology
  contributor:
    fullname: Bus
– volume: 118
  start-page: 716
  year: 2010
  end-page: 731
  ident: bb0025
  article-title: Formaldehyde: integrating dosimetry, cytotoxicity, and genomics to understand dose-dependent transitions for an endogenous compound
  publication-title: Toxicol. Sci.
  contributor:
    fullname: Thomas
– volume: 48
  start-page: 273
  year: 1996
  end-page: 294
  ident: bb0130
  article-title: Pneumotoxicity and hepatotoxicity of styrene and styrene oxide
  publication-title: J. Toxicol. Environ. Health
  contributor:
    fullname: Carlson
– volume: 58
  start-page: 2788
  year: 2009
  end-page: 2796
  ident: bb0060
  article-title: Insulin resistance and altered systemic glucose metabolism in mice lacking Nur77
  publication-title: Diabetes
  contributor:
    fullname: Tontonoz
– volume: 4
  start-page: 249
  year: 2003
  end-page: 264
  ident: bb0160
  article-title: Exploration, normalization, and summaries of high density oligonucleotide array probe level data
  publication-title: Biostatistics
  contributor:
    fullname: Speed
– volume: 73
  start-page: 159
  year: 1984
  end-page: 175
  ident: bb0215
  article-title: A physiologically based description of the inhalation pharmacokinetics of styrene in rats and humans
  publication-title: Toxicol. Appl. Pharmacol.
  contributor:
    fullname: Andersen
– volume: 00
  start-page: 000
  year: 2017
  ident: bb0105
  article-title: Complete attenuation of mouse lung cell proliferation and tumorigenicity in CYP2F2 knockout and CYP2F1 humanized mice exposed to inhaled styrene for up to 2 years supports a lack of human relevance
  publication-title: Toxicol. Sci.
  contributor:
    fullname: Andersen
– year: 2014
  ident: bb0200
  article-title: An interactive visualization tool to interpret transcriptomic data
  publication-title: Proceedings of the 6th International Conference on Bioinformatics and Computational Biology
  contributor:
    fullname: Pendse
– volume: 1660
  start-page: 171
  year: 2004
  end-page: 199
  ident: bb0250
  article-title: Metabolism and function of coenzyme Q
  publication-title: Biochim. Biophys. Acta
  contributor:
    fullname: Dallner
– volume: 51
  start-page: 1275
  year: 2009
  end-page: 1287
  ident: bb0045
  article-title: Epidemiologic studies of styrene and cancer: a review of the literature
  publication-title: J. Occup. Environ. Med.
  contributor:
    fullname: Mandel
– volume: 37
  start-page: 187
  year: 2005
  end-page: 192
  ident: bb0255
  article-title: System-level identification of transcriptional circuits underlying mammalian circadian clocks
  publication-title: Nat. Genet.
  contributor:
    fullname: Hashimoto
– volume: 57
  start-page: 289
  year: 1995
  end-page: 300
  ident: bb0035
  article-title: Controlling the False Discovery Rate: a practical and powerful approach to multiple testing
  publication-title: J. R. Stat. Soc. Ser. B Methodol.
  contributor:
    fullname: Hochberg
– volume: 126
  start-page: 801
  year: 2006
  end-page: 810
  ident: bb0265
  article-title: Nuclear receptor expression links the circadian clock to metabolism
  publication-title: Cell
  contributor:
    fullname: Evans
– volume: 68
  start-page: 229
  year: 2005
  end-page: 237
  ident: bb0085
  article-title: Ring-oxidized metabolites of styrene contribute to styrene-induced Clara-cell toxicity in mice
  publication-title: J Toxicol Environ Health A
  contributor:
    fullname: Mellert
– volume: 35
  start-page: 152
  year: 1997
  end-page: 165
  ident: bb0070
  article-title: Subchronic inhalation studies of styrene in CD rats and CD-1 mice
  publication-title: Fundam. Appl. Toxicol.
  contributor:
    fullname: Mullins
– volume: 46
  start-page: 266
  year: 1998
  end-page: 281
  ident: bb1236
  article-title: Chronic toxicity/oncogenicity study of styrene in CD rats by inhalation exposure for 104 weeks
  publication-title: Toxicol. Sci.
  contributor:
    fullname: Brown
– volume: 119
  start-page: 221
  year: 2013
  end-page: 282
  ident: bb0115
  article-title: The circadian clock in cancer development and therapy
  publication-title: Prog. Mol. Biol. Transl. Sci.
  contributor:
    fullname: Kettner
– volume: 62
  start-page: 214
  year: 2012
  end-page: 220
  ident: bb0095
  article-title: CYP2F2-generated metabolites, not styrene oxide, are a key event mediating the mode of action of styrene-induced mouse lung tumors
  publication-title: Regul. Toxicol. Pharmacol.
  contributor:
    fullname: Sarang
– volume: 14
  start-page: 789
  year: 2002
  end-page: 834
  ident: bb0235
  article-title: Physiologically based pharmacokinetic modeling of styrene and styrene oxide respiratory-tract dosimetry in rodents and humans
  publication-title: Inhal. Toxicol.
  contributor:
    fullname: Andersen
– volume: 73
  start-page: 176
  year: 1984
  end-page: 187
  ident: bb0010
  article-title: Inhalation pharmacokinetics: evaluating systemic extraction, total in vivo metabolism, and the time course of enzyme induction for inhaled styrene in rats based on arterial blood:inhaled air concentration ratios
  publication-title: Toxicol. Appl. Pharmacol.
  contributor:
    fullname: Ramsey
– volume: 35
  start-page: 308
  year: 2002
  end-page: 319
  ident: bb0080
  article-title: Styrene respiratory tract toxicity and mouse lung tumors are mediated by CYP2F-generated metabolites
  publication-title: Regul. Toxicol. Pharmacol.
  contributor:
    fullname: Cushman
– start-page: 267
  year: 1973
  end-page: 281
  ident: bb0005
  article-title: Information theory and an extension of the maximum likelihood principle
  publication-title: 2nd International Symposium on Information Theory
  contributor:
    fullname: Akaike
– volume: 66
  start-page: 24
  year: 2013
  end-page: 29
  ident: bb0100
  article-title: Studies of styrene, styrene oxide and 4-hydroxystyrene toxicity in CYP2F2 knockout and CYP2F1 humanized mice support lack of human relevance for mouse lung tumors
  publication-title: Regul. Toxicol. Pharmacol.
  contributor:
    fullname: Sarang
– volume: 332
  start-page: 149
  year: 2017
  end-page: 158
  ident: bb0030
  article-title: Combining transcriptomics and PBPK modeling indicates a primary role of hypoxia and altered circadian signaling in dichloromethane carcinogenicity in mouse lung and liver
  publication-title: Toxicol Appl Pharmacol.
  contributor:
    fullname: McMullen
– volume: 157
  start-page: 48
  year: 2016
  end-page: 60
  ident: bb0230
  article-title: Nuclear receptor 4A (NR4A) family - orphans no more
  publication-title: J. Steroid Biochem. Mol. Biol.
  contributor:
    fullname: Tjalkens
– volume: 137
  start-page: 185
  year: 2001
  end-page: 202
  ident: bb0145
  article-title: The toxicity of styrene to the nasal epithelium of mice and rats: studies on the mode of action and relevance to humans
  publication-title: Chem. Biol. Interact.
  contributor:
    fullname: Foster
– volume: 4
  start-page: 25
  year: 2006
  end-page: 36
  ident: bb0125
  article-title: The circadian PAR-domain basic leucine zipper transcription factors DBP, TEF, and HLF modulate basal and inducible xenobiotic detoxification
  publication-title: Cell Metab.
  contributor:
    fullname: Schibler
– volume: 209
  start-page: 14
  year: 2014
  end-page: 24
  ident: bb0180
  article-title: A map of the PPARalpha transcription regulatory network for primary human hepatocytes
  publication-title: Chem. Biol. Interact.
  contributor:
    fullname: Andersen
– volume: 55
  start-page: 205
  year: 2009
  ident: 10.1016/j.taap.2017.09.015_bb0090
  article-title: Mouse specific lung tumors from CYP2F2-mediated cytotoxic metabolism: an endpoint/toxic response where data from multiple chemicals converge to support a mode of action
  publication-title: Regul. Toxicol. Pharmacol.
  doi: 10.1016/j.yrtph.2009.07.002
  contributor:
    fullname: Cruzan
– volume: 70
  start-page: 3628
  year: 2010
  ident: 10.1016/j.taap.2017.09.015_bb0175
  article-title: A unique pharmacophore for activation of the nuclear orphan receptor Nur77 in vivo and in vitro
  publication-title: Cancer Res.
  doi: 10.1158/0008-5472.CAN-09-3160
  contributor:
    fullname: Liu
– volume: 24
  start-page: 195
  year: 2013
  ident: 10.1016/j.taap.2017.09.015_bb0065
  article-title: Cancer mortality of workers exposed to styrene in the U.S. Reinforced plastics and composite industry
  publication-title: Epidemiology
  doi: 10.1097/EDE.0b013e318281a30f
  contributor:
    fullname: Collins
– volume: 73
  start-page: 176
  year: 1984
  ident: 10.1016/j.taap.2017.09.015_bb0010
  article-title: Inhalation pharmacokinetics: evaluating systemic extraction, total in vivo metabolism, and the time course of enzyme induction for inhaled styrene in rats based on arterial blood:inhaled air concentration ratios
  publication-title: Toxicol. Appl. Pharmacol.
  doi: 10.1016/0041-008X(84)90065-6
  contributor:
    fullname: Andersen
– volume: 137
  start-page: 185
  year: 2001
  ident: 10.1016/j.taap.2017.09.015_bb0145
  article-title: The toxicity of styrene to the nasal epithelium of mice and rats: studies on the mode of action and relevance to humans
  publication-title: Chem. Biol. Interact.
  doi: 10.1016/S0009-2797(01)00236-8
  contributor:
    fullname: Green
– volume: 35
  start-page: 184
  year: 2015
  ident: 10.1016/j.taap.2017.09.015_bb0225
  article-title: The NR4A orphan nuclear receptors: mediators in metabolism and diseases
  publication-title: J. Recept. Signal Transduct. Res.
  doi: 10.3109/10799893.2014.948555
  contributor:
    fullname: Ranhotra
– volume: 150
  start-page: 335
  year: 2004
  ident: 10.1016/j.taap.2017.09.015_bb0055
  article-title: Comparison of the susceptibility of wild-type and CYP2E1 knockout mice to the hepatotoxic and pneumotoxic effects of styrene and styrene oxide
  publication-title: Toxicol. Lett.
  doi: 10.1016/j.toxlet.2004.02.004
  contributor:
    fullname: Carlson
– volume: 111
  start-page: 16219
  year: 2014
  ident: 10.1016/j.taap.2017.09.015_bb0275
  article-title: A circadian gene expression atlas in mammals: implications for biology and medicine
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
  doi: 10.1073/pnas.1408886111
  contributor:
    fullname: Zhang
– volume: 48
  start-page: 273
  year: 1996
  ident: 10.1016/j.taap.2017.09.015_bb0130
  article-title: Pneumotoxicity and hepatotoxicity of styrene and styrene oxide
  publication-title: J. Toxicol. Environ. Health
  doi: 10.1080/009841096161339
  contributor:
    fullname: Gadberry
– volume: 18
  start-page: 4
  year: 2007
  ident: 10.1016/j.taap.2017.09.015_bb0170
  article-title: A sense of time: how molecular clocks organize metabolism
  publication-title: Trends Endocrinol. Metab.
  doi: 10.1016/j.tem.2006.11.005
  contributor:
    fullname: Kohsaka
– volume: 157
  start-page: 48
  year: 2016
  ident: 10.1016/j.taap.2017.09.015_bb0230
  article-title: Nuclear receptor 4A (NR4A) family - orphans no more
  publication-title: J. Steroid Biochem. Mol. Biol.
  doi: 10.1016/j.jsbmb.2015.04.016
  contributor:
    fullname: Safe
– volume: 43
  start-page: D921
  year: 2015
  ident: 10.1016/j.taap.2017.09.015_bb0155
  article-title: Open TG-GATEs: a large-scale toxicogenomics database
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gku955
  contributor:
    fullname: Igarashi
– volume: 26
  start-page: 142
  year: 1997
  ident: 10.1016/j.taap.2017.09.015_bb0140
  article-title: Chloroform mode of action: implications for cancer risk assessment
  publication-title: Regul. Toxicol. Pharmacol.
  doi: 10.1006/rtph.1997.1161
  contributor:
    fullname: Golden
– volume: 119
  start-page: 221
  year: 2013
  ident: 10.1016/j.taap.2017.09.015_bb0115
  article-title: The circadian clock in cancer development and therapy
  publication-title: Prog. Mol. Biol. Transl. Sci.
  doi: 10.1016/B978-0-12-396971-2.00009-9
  contributor:
    fullname: Fu
– volume: 18
  start-page: 376
  year: 1992
  ident: 10.1016/j.taap.2017.09.015_bb0110
  article-title: Methylene chloride–an inhalation study to investigate pathological and biochemical events occurring in the lungs of mice over an exposure period of 90 days
  publication-title: Fundam. Appl. Toxicol.
  doi: 10.1016/0272-0590(92)90136-6
  contributor:
    fullname: Foster
– volume: 4
  start-page: 249
  year: 2003
  ident: 10.1016/j.taap.2017.09.015_bb0160
  article-title: Exploration, normalization, and summaries of high density oligonucleotide array probe level data
  publication-title: Biostatistics
  doi: 10.1093/biostatistics/4.2.249
  contributor:
    fullname: Irizarry
– volume: 46
  start-page: 266
  year: 1998
  ident: 10.1016/j.taap.2017.09.015_bb1236
  article-title: Chronic toxicity/oncogenicity study of styrene in CD rats by inhalation exposure for 104 weeks
  publication-title: Toxicol. Sci.
  doi: 10.1093/toxsci/46.2.266
  contributor:
    fullname: Cruzan
– volume: 53
  start-page: 159
  year: 2000
  ident: 10.1016/j.taap.2017.09.015_bb0015
  article-title: Lessons learned in applying the U.S. EPA proposed cancer guidelines to specific compounds
  publication-title: Toxicol. Sci.
  doi: 10.1093/toxsci/53.2.159
  contributor:
    fullname: Andersen
– volume: 66
  start-page: 24
  year: 2013
  ident: 10.1016/j.taap.2017.09.015_bb0100
  article-title: Studies of styrene, styrene oxide and 4-hydroxystyrene toxicity in CYP2F2 knockout and CYP2F1 humanized mice support lack of human relevance for mouse lung tumors
  publication-title: Regul. Toxicol. Pharmacol.
  doi: 10.1016/j.yrtph.2013.02.008
  contributor:
    fullname: Cruzan
– volume: 150
  start-page: 268
  year: 2009
  ident: 10.1016/j.taap.2017.09.015_bb0135
  article-title: Circadian timing in the lung; a specific role for bronchiolar epithelial cells
  publication-title: Endocrinology
  doi: 10.1210/en.2008-0638
  contributor:
    fullname: Gibbs
– volume: 126
  start-page: 801
  year: 2006
  ident: 10.1016/j.taap.2017.09.015_bb0265
  article-title: Nuclear receptor expression links the circadian clock to metabolism
  publication-title: Cell
  doi: 10.1016/j.cell.2006.06.050
  contributor:
    fullname: Yang
– volume: 105
  start-page: 368
  year: 2008
  ident: 10.1016/j.taap.2017.09.015_bb0020
  article-title: Genomic signatures and dose-dependent transitions in nasal epithelial responses to inhaled formaldehyde in the rat
  publication-title: Toxicol. Sci.
  doi: 10.1093/toxsci/kfn097
  contributor:
    fullname: Andersen
– volume: 8
  start-page: 387
  year: 2007
  ident: 10.1016/j.taap.2017.09.015_bb0270
  article-title: BMDExpress: a software tool for the benchmark dose analyses of genomic data
  publication-title: BMC Genomics
  doi: 10.1186/1471-2164-8-387
  contributor:
    fullname: Yang
– volume: 21
  start-page: 185
  year: 2001
  ident: 10.1016/j.taap.2017.09.015_bb0075
  article-title: Chronic toxicity/oncogenicity study of styrene in CD-1 mice by inhalation exposure for 104 weeks
  publication-title: J. Appl. Toxicol.
  doi: 10.1002/jat.737
  contributor:
    fullname: Cruzan
– start-page: 359
  year: 2013
  ident: 10.1016/j.taap.2017.09.015_bb0185
  article-title: Mammalian circadian clock: the roles of transcriptional repression and delay
  publication-title: Handb. Exp. Pharmacol.
  doi: 10.1007/978-3-642-25950-0_15
  contributor:
    fullname: Minami
– volume: 57
  start-page: 289
  year: 1995
  ident: 10.1016/j.taap.2017.09.015_bb0035
  article-title: Controlling the False Discovery Rate: a practical and powerful approach to multiple testing
  publication-title: J. R. Stat. Soc. Ser. B Methodol.
  contributor:
    fullname: Benjamini
– volume: 58
  start-page: 2788
  year: 2009
  ident: 10.1016/j.taap.2017.09.015_bb0060
  article-title: Insulin resistance and altered systemic glucose metabolism in mice lacking Nur77
  publication-title: Diabetes
  doi: 10.2337/db09-0763
  contributor:
    fullname: Chao
– volume: 24
  start-page: 324
  year: 2016
  ident: 10.1016/j.taap.2017.09.015_bb0190
  article-title: Circadian rhythm disruption promotes lung tumorigenesis
  publication-title: Cell Metab.
  doi: 10.1016/j.cmet.2016.07.001
  contributor:
    fullname: Papagiannakopoulos
– volume: 107
  start-page: 1462
  year: 2014
  ident: 10.1016/j.taap.2017.09.015_bb0165
  article-title: A mammalian circadian clock model incorporating daytime expression elements
  publication-title: Biophys. J.
  doi: 10.1016/j.bpj.2014.07.022
  contributor:
    fullname: Jolley
– volume: 4
  start-page: 25
  year: 2006
  ident: 10.1016/j.taap.2017.09.015_bb0125
  article-title: The circadian PAR-domain basic leucine zipper transcription factors DBP, TEF, and HLF modulate basal and inducible xenobiotic detoxification
  publication-title: Cell Metab.
  doi: 10.1016/j.cmet.2006.04.015
  contributor:
    fullname: Gachon
– volume: 14
  start-page: 789
  year: 2002
  ident: 10.1016/j.taap.2017.09.015_bb0235
  article-title: Physiologically based pharmacokinetic modeling of styrene and styrene oxide respiratory-tract dosimetry in rodents and humans
  publication-title: Inhal. Toxicol.
  doi: 10.1080/08958370290084647
  contributor:
    fullname: Sarangapani
– volume: 1660
  start-page: 171
  year: 2004
  ident: 10.1016/j.taap.2017.09.015_bb0250
  article-title: Metabolism and function of coenzyme Q
  publication-title: Biochim. Biophys. Acta
  doi: 10.1016/j.bbamem.2003.11.012
  contributor:
    fullname: Turunen
– volume: 118
  start-page: 716
  year: 2010
  ident: 10.1016/j.taap.2017.09.015_bb0025
  article-title: Formaldehyde: integrating dosimetry, cytotoxicity, and genomics to understand dose-dependent transitions for an endogenous compound
  publication-title: Toxicol. Sci.
  doi: 10.1093/toxsci/kfq303
  contributor:
    fullname: Andersen
– volume: 169
  start-page: 107
  year: 2001
  ident: 10.1016/j.taap.2017.09.015_bb0150
  article-title: The role of cytochromes P-450 in styrene induced pulmonary toxicity and carcinogenicity
  publication-title: Toxicology
  doi: 10.1016/S0300-483X(01)00488-7
  contributor:
    fullname: Green
– volume: 4
  start-page: 84
  issue: Suppl. 2
  year: 1978
  ident: 10.1016/j.taap.2017.09.015_bb0220
  article-title: Pharmacokinetics of inhaled styrene in rats and humans
  publication-title: Scand. J. Work Environ. Health
  doi: 10.5271/sjweh.2730
  contributor:
    fullname: Ramsey
– volume: 62
  start-page: 214
  year: 2012
  ident: 10.1016/j.taap.2017.09.015_bb0095
  article-title: CYP2F2-generated metabolites, not styrene oxide, are a key event mediating the mode of action of styrene-induced mouse lung tumors
  publication-title: Regul. Toxicol. Pharmacol.
  doi: 10.1016/j.yrtph.2011.10.007
  contributor:
    fullname: Cruzan
– volume: 332
  start-page: 149
  year: 2017
  ident: 10.1016/j.taap.2017.09.015_bb0030
  article-title: Combining transcriptomics and PBPK modeling indicates a primary role of hypoxia and altered circadian signaling in dichloromethane carcinogenicity in mouse lung and liver
  publication-title: Toxicol Appl Pharmacol.
  doi: 10.1016/j.taap.2017.04.002
  contributor:
    fullname: Andersen
– volume: 73
  start-page: 339
  year: 2015
  ident: 10.1016/j.taap.2017.09.015_bb0040
  article-title: Using gene expression profiling to evaluate cellular responses in mouse lungs exposed to V2O5 and a group of other mouse lung tumorigens and non-tumorigens
  publication-title: Regul. Toxicol. Pharmacol.
  doi: 10.1016/j.yrtph.2015.07.017
  contributor:
    fullname: Black
– volume: 00
  start-page: 000
  year: 2017
  ident: 10.1016/j.taap.2017.09.015_bb0105
  article-title: Complete attenuation of mouse lung cell proliferation and tumorigenicity in CYP2F2 knockout and CYP2F1 humanized mice exposed to inhaled styrene for up to 2 years supports a lack of human relevance
  publication-title: Toxicol. Sci.
  contributor:
    fullname: Cruzan
– volume: 18
  start-page: 1397
  year: 2004
  ident: 10.1016/j.taap.2017.09.015_bb0120
  article-title: The loss of circadian PAR bZip transcription factors results in epilepsy
  publication-title: Genes Dev.
  doi: 10.1101/gad.301404
  contributor:
    fullname: Gachon
– volume: 37
  start-page: 187
  year: 2005
  ident: 10.1016/j.taap.2017.09.015_bb0255
  article-title: System-level identification of transcriptional circuits underlying mammalian circadian clocks
  publication-title: Nat. Genet.
  doi: 10.1038/ng1504
  contributor:
    fullname: Ueda
– year: 1986
  ident: 10.1016/j.taap.2017.09.015_bb0260
  contributor:
    fullname: US_NTP
– volume: 51
  start-page: 1275
  year: 2009
  ident: 10.1016/j.taap.2017.09.015_bb0045
  article-title: Epidemiologic studies of styrene and cancer: a review of the literature
  publication-title: J. Occup. Environ. Med.
  doi: 10.1097/JOM.0b013e3181ad49b2
  contributor:
    fullname: Boffetta
– volume: 24
  start-page: 1891
  year: 2010
  ident: 10.1016/j.taap.2017.09.015_bb0195
  article-title: Minireview: nuclear hormone receptor 4A signaling: implications for metabolic disease
  publication-title: Mol. Endocrinol.
  doi: 10.1210/me.2010-0015
  contributor:
    fullname: Pearen
– volume: 98
  start-page: 240
  year: 2007
  ident: 10.1016/j.taap.2017.09.015_bb0240
  article-title: A method to integrate benchmark dose estimates with genomic data to assess the functional effects of chemical exposure
  publication-title: Toxicol. Sci.
  doi: 10.1093/toxsci/kfm092
  contributor:
    fullname: Thomas
– volume: 209
  start-page: 14
  year: 2014
  ident: 10.1016/j.taap.2017.09.015_bb0180
  article-title: A map of the PPARalpha transcription regulatory network for primary human hepatocytes
  publication-title: Chem. Biol. Interact.
  doi: 10.1016/j.cbi.2013.11.006
  contributor:
    fullname: McMullen
– volume: 53
  start-page: 793
  year: 2004
  ident: 10.1016/j.taap.2017.09.015_bb0210
  article-title: Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests
  publication-title: Syst. Biol.
  doi: 10.1080/10635150490522304
  contributor:
    fullname: Posada
– volume: 42
  start-page: 1243
  year: 2017
  ident: 10.1016/j.taap.2017.09.015_bb0050
  article-title: Pharmacological Activators of the NR4A Nuclear Receptors Enhance LTP in a CREB/CBP-Dependent Manner
  publication-title: Neuropsychopharmacology
  doi: 10.1038/npp.2016.253
  contributor:
    fullname: Bridi
– volume: 68
  start-page: 229
  year: 2005
  ident: 10.1016/j.taap.2017.09.015_bb0085
  article-title: Ring-oxidized metabolites of styrene contribute to styrene-induced Clara-cell toxicity in mice
  publication-title: J Toxicol Environ Health A
  doi: 10.1080/15287390590890464
  contributor:
    fullname: Cruzan
– volume: 35
  start-page: 308
  year: 2002
  ident: 10.1016/j.taap.2017.09.015_bb0080
  article-title: Styrene respiratory tract toxicity and mouse lung tumors are mediated by CYP2F-generated metabolites
  publication-title: Regul. Toxicol. Pharmacol.
  doi: 10.1006/rtph.2002.1545
  contributor:
    fullname: Cruzan
– volume: 73
  start-page: 159
  year: 1984
  ident: 10.1016/j.taap.2017.09.015_bb0215
  article-title: A physiologically based description of the inhalation pharmacokinetics of styrene in rats and humans
  publication-title: Toxicol. Appl. Pharmacol.
  doi: 10.1016/0041-008X(84)90064-4
  contributor:
    fullname: Ramsey
– volume: 35
  start-page: 152
  year: 1997
  ident: 10.1016/j.taap.2017.09.015_bb0070
  article-title: Subchronic inhalation studies of styrene in CD rats and CD-1 mice
  publication-title: Fundam. Appl. Toxicol.
  doi: 10.1006/faat.1996.2273
  contributor:
    fullname: Cruzan
– year: 2014
  ident: 10.1016/j.taap.2017.09.015_bb0200
  article-title: An interactive visualization tool to interpret transcriptomic data
  contributor:
    fullname: Pendse
– volume: 91
  start-page: 1749
  year: 2017
  ident: 10.1016/j.taap.2017.09.015_bb0205
  article-title: Information-dependent enrichment analysis reveals time-dependent transcriptional regulation of the estrogen pathway of toxicity
  publication-title: Arch. Toxicol.
  doi: 10.1007/s00204-016-1824-6
  contributor:
    fullname: Pendse
– volume: 112
  start-page: 311
  year: 2009
  ident: 10.1016/j.taap.2017.09.015_bb0245
  article-title: Use of short-term transcriptional profiles to assess the long-term cancer-related safety of environmental and industrial chemicals
  publication-title: Toxicol. Sci.
  doi: 10.1093/toxsci/kfp233
  contributor:
    fullname: Thomas
– start-page: 267
  year: 1973
  ident: 10.1016/j.taap.2017.09.015_bb0005
  article-title: Information theory and an extension of the maximum likelihood principle
  contributor:
    fullname: Akaike
SSID ssj0009441
Score 2.4020495
Snippet Styrene increased lung tumors in mice at chronic inhalation exposures of 20ppm and greater. MIEs, KEs and MFs were examined using gene expression in three...
SourceID crossref
pubmed
elsevier
SourceType Aggregation Database
Index Database
Publisher
StartPage 28
SubjectTerms Adaptation and modulating factors
Animals
Aryl Hydrocarbon Hydroxylases - genetics
Aryl Hydrocarbon Hydroxylases - metabolism
Circadian Rhythm - drug effects
Circadian Rhythm - genetics
Circadian Rhythm Signaling Peptides and Proteins - genetics
Circadian Rhythm Signaling Peptides and Proteins - metabolism
Cytochrome P-450 CYP2B6 - genetics
Cytochrome P-450 CYP2B6 - metabolism
Cytochrome P-450 Enzyme System - deficiency
Cytochrome P-450 Enzyme System - genetics
Cytochrome P450 Family 2 - genetics
Cytochrome P450 Family 2 - metabolism
Dose-Response Relationship, Drug
Gene Expression Profiling - methods
Gene Regulatory Networks - drug effects
Genotype
Inhalation Exposure - adverse effects
Intracellular Signaling Peptides and Proteins - genetics
Intracellular Signaling Peptides and Proteins - metabolism
Lung - drug effects
Lung - metabolism
Male
Mice, Inbred C57BL
Mice, Knockout
MIEs
Models, Animal
Molecular initiating events
Mouse lung tumors
Nr4 family gene downregulation
Phenotype
Signal Transduction - drug effects
Signal Transduction - genetics
Styrene inhalation
Styrenes - metabolism
Styrenes - toxicity
Time Factors
Toxicogenetics - methods
Transcription Factors - genetics
Transcription Factors - metabolism
Transcriptome - drug effects
Title Assessing molecular initiating events (MIEs), key events (KEs) and modulating factors (MFs) for styrene responses in mouse lungs using whole genome gene expression profiling following 1-day and multi-week exposures
URI https://dx.doi.org/10.1016/j.taap.2017.09.015
https://www.ncbi.nlm.nih.gov/pubmed/28951217
Volume 335
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1LS8QwEA6iF0HE91vmIKK41aZNm-1RxGVVFA8KeytJk8L66IpdWffiz_T3ONO0rl48CIW22TxKMztJk2--j7E9E0VSR0Z4Ko59T4S59JSMCWUecJWLxBc57ehe38Tde3HZi3pT7KyJhSFYZe37nU-vvHWdclK_zZOXfp9ifAUx0_Q4GmnYlsT4SWRbaNPHHxOYRyKEU80T-NmMuevAGYfxGipFnJVcVlynJI375-D0Y-TpLLD5esoIp-6pFtmULZbY_q3jnB634G4SQlW2YB9uJ2zU4yU25xbmwMUbLbNPt82LIxY8N9K40CcIkSIENFSMTiUcXF-cl4ctwP_4d9IVpoAqDBY0leoXZq_1ejB_B3_EGTCUtK5dWHh16FtbYu1ACwwWntCzlPBWNT4iYV4gitjn6mTBvteg3AKcknhVP9rpYERX3DNq7JonEKQ3svaRygxojbNcYfed87uzrleLO3gZuo2hF4ci4MSKqwNlTRAqg50YB1qLrK1FO5FWikRbwwPFDc_9HJ0FyTbiEassDMNVNl0MCrvOQMt2nmW-MqE1wiZCK641bRnGmW_QgW6wo6ZX0xfH4ZE24LaHlGwgJRtI_SRFG9hgUdPx6S9LTHGQ-bPcmrOS7zbwWxanU1xu_rPGLTZLdxT5yKNtNj18fbM7OAUa6t3KxnfZzOnFVffmC2glCQM
link.rule.ids 315,783,787,4511,24130,27938,27939,45599,45693
linkProvider Elsevier
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Nb9QwELVKOYCEEC1QSqGdA6pAbNo4duLNEVVdbT-26mEr7c2yY0daoNmq2WrZCz-T39OZOOnCpQekSIkcf0TxZOzYb95j7JNLU2VTJyOTZXEkRakiozJCmSfclDKPZUk7uqOLbHglTyfpZI0ddbEwBKtsfX_w6Y23blMO27d5eDOdUoyvJGaaCUcjFX0lnrCnkviz0KgPfq9wHrmUQTZP4n8zZm8jZwLIa24MkVZy1ZCdkjbuo6PTX0PP4BV72c4Z4Vt4rA225qtNtn8ZSKeXPRivYqjqHuzD5YqOernJXoSVOQgBR6_Zn7DPi0MWXHfauDAlDJEhCDQ0lE41fB6dHNdfeoAf-UPSGaaAqRwWdI3sF2ZvBXsw_wBv4hQYalrYrjzcBvitr7F2oBUGDz_RtdRw1zS-IGVeII7Y6-bkwf9qUbkVBCnxpn401NmCrnjkzDI0TyjIaOH9Dyozo0XO-g27GhyPj4ZRq-4QFeg35lEmZMKJFtcmxrtEGIe9mCXWyqJvZT9XXsncescTwx0v4xK9Bek24pGZQgjxlq1Xs8q_Y2BVvyyK2DjhnfS5tIZbS3uGWRE79KDb7GvXq_omkHjoDt32XZMNaLIBHecabWCbpV3H639MUeMo82i5rWAlD23gzyzOp7h6_5817rFnw_HoXJ-fXJztsOd0h8IgefqBrc9v7_xHnA_N7W5j7_eUqAql
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Assessing+molecular+initiating+events+%28MIEs%29%2C+key+events+%28KEs%29+and+modulating+factors+%28MFs%29+for+styrene+responses+in+mouse+lungs+using+whole+genome+gene+expression+profiling+following+1-day+and+multi-week+exposures&rft.jtitle=Toxicology+and+applied+pharmacology&rft.au=Andersen%2C+Melvin+E.&rft.au=Cruzan%2C+George&rft.au=Black%2C+Michael+B.&rft.au=Pendse%2C+Salil+N.&rft.date=2017-11-15&rft.issn=0041-008X&rft.volume=335&rft.spage=28&rft.epage=40&rft_id=info:doi/10.1016%2Fj.taap.2017.09.015&rft.externalDBID=n%2Fa&rft.externalDocID=10_1016_j_taap_2017_09_015
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0041-008X&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0041-008X&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0041-008X&client=summon