Hepatitis C virus NS5A region mutation in chronic hepatitis C genotype 1 patients who are non-responders to two or more treatments and its relationship with response to a new treatment

To determine the number of mutations in the NS5A region of the hepatitis C virus (HCV) and its relationship to the response to antiviral therapy in patients with chronic hepatitis C genotype 1 who are non-responders to two or more treatments. Sequences within HCV NS5A [PKR binding domain (PKRBD) and...

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Published inWorld journal of gastroenterology : WJG Vol. 23; no. 25; pp. 4538 - 4547
Main Authors Muñoz de Rueda, Paloma, Fuentes Rodríguez, José Manuel, Quiles Pérez, Rosa, Gila Medina, Ana, Martín Álvarez, Ana Belén, Casado Ruíz, Jorge, Ruíz Extremera, Angeles, Salmerón, Javier
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Abstract To determine the number of mutations in the NS5A region of the hepatitis C virus (HCV) and its relationship to the response to antiviral therapy in patients with chronic hepatitis C genotype 1 who are non-responders to two or more treatments. Sequences within HCV NS5A [PKR binding domain (PKRBD) and the interferon-sensitivity-determining region (ISDR)] were analysed direct sequencing in a selected cohort of 72 patients, with a total of 201 treatments [interferon-alpha (IFN-α), = 49; IFN-α + ribavirin (RBV), = 75; pegylated (peg) IFN-α + RBV, = 47; first-generation direct-acting antivirals (DAAs), = 13; and second-generation DAAs, = 17]. Of these, 48/201 achieved a sustained virological response (SVR) and 153/201 achieved no virological response (NVR). For both regions, treatments resulting in SVR were associated with more baseline mutations than were treatments resulting in NVR (SVR NVR; PKRBD: 5.82 ± 3 4.86 ± 2 mutations, = 0.045; ISDR: 2.65 ± 2 1.51 ± 1.7 mutations, = 0.005). A decrease or no change in the number of mutations over time between treatments in the PKRBD or ISDR, as shown by sequencing, was associated with patients who usually failed to respond to treatment (PKRBD, = 0.02; ISDR, = 0.001). Moreover, patients showing a post-treatment baseline viral load > 600000 IU/mL and increased ISDR mutations with respect to the previous treatment were 9.21 times more likely to achieve SVR ( = 0.001). The obtained results show that among patients who have shown no response to two or more antiviral treatments, the likelihood of achieving SVR increases with the genetic variability in the ISDR region (≥ 2 mutations or number of substitutions from the HCV-J and HCV-1 prototype), especially when the viral load is greater than 600000 IU/mL.
AbstractList To determine the number of mutations in the NS5A region of the hepatitis C virus (HCV) and its relationship to the response to antiviral therapy in patients with chronic hepatitis C genotype 1 who are non-responders to two or more treatments. Sequences within HCV NS5A [PKR binding domain (PKRBD) and the interferon-sensitivity-determining region (ISDR)] were analysed direct sequencing in a selected cohort of 72 patients, with a total of 201 treatments [interferon-alpha (IFN-α), = 49; IFN-α + ribavirin (RBV), = 75; pegylated (peg) IFN-α + RBV, = 47; first-generation direct-acting antivirals (DAAs), = 13; and second-generation DAAs, = 17]. Of these, 48/201 achieved a sustained virological response (SVR) and 153/201 achieved no virological response (NVR). For both regions, treatments resulting in SVR were associated with more baseline mutations than were treatments resulting in NVR (SVR NVR; PKRBD: 5.82 ± 3 4.86 ± 2 mutations, = 0.045; ISDR: 2.65 ± 2 1.51 ± 1.7 mutations, = 0.005). A decrease or no change in the number of mutations over time between treatments in the PKRBD or ISDR, as shown by sequencing, was associated with patients who usually failed to respond to treatment (PKRBD, = 0.02; ISDR, = 0.001). Moreover, patients showing a post-treatment baseline viral load > 600000 IU/mL and increased ISDR mutations with respect to the previous treatment were 9.21 times more likely to achieve SVR ( = 0.001). The obtained results show that among patients who have shown no response to two or more antiviral treatments, the likelihood of achieving SVR increases with the genetic variability in the ISDR region (≥ 2 mutations or number of substitutions from the HCV-J and HCV-1 prototype), especially when the viral load is greater than 600000 IU/mL.
Author Gila Medina, Ana
Casado Ruíz, Jorge
Ruíz Extremera, Angeles
Muñoz de Rueda, Paloma
Salmerón, Javier
Fuentes Rodríguez, José Manuel
Quiles Pérez, Rosa
Martín Álvarez, Ana Belén
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Keywords Interferon-based therapy
Sustained virological response
Chronic hepatitis C
Number of mutations
NS5A region
Interferon-free therapy
Language English
License This article is an open-access article which was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial.
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Notes Author contributions: Salmerón J contributed to planning and conducting the study and collecting and interpreting the data; Muñoz de Rueda P, Fuentes Rodríguez JM and Quiles Pérez R contributed to collecting and interpreting the data and drafting the manuscript; Gila Medina A, Martín Álvarez AB, Casado Ruíz J and Ruíz Extremera Á contributed to collecting the data; and Muñoz de Rueda P contributed to the biostatistical analysis.
Supported by “Consejería de Salud de la Junta de Andalucía”, No. PI0137/07; and “Instituto de Salud Carlos III”, No. FIS-Intrasalud PI010/717.
Telephone: +34-95-8023655 Fax: +34-95-8023434
Correspondence to: Dr. Rosa Quiles Pérez, CIBERehd Researcher, Research Support Unit, University Hospital San Cecilio of Granada, Dr/ Olóriz 16, 18012 Granada, Spain. rosa-quiles@hotmail.com
OpenAccessLink https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5504369/
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Snippet To determine the number of mutations in the NS5A region of the hepatitis C virus (HCV) and its relationship to the response to antiviral therapy in patients...
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SubjectTerms Antiviral Agents - pharmacology
Antiviral Agents - therapeutic use
Basic Study
Drug Resistance, Multiple, Viral - genetics
Drug Therapy, Combination
Female
Genotype
Hepacivirus - genetics
Hepacivirus - isolation & purification
Hepatitis C, Chronic - drug therapy
Hepatitis C, Chronic - virology
Humans
Interferon-alpha - pharmacology
Interferon-alpha - therapeutic use
Male
Mutation
Polyethylene Glycols - pharmacology
Polyethylene Glycols - therapeutic use
Prospective Studies
Retrospective Studies
Ribavirin - pharmacology
Ribavirin - therapeutic use
Sequence Analysis, RNA
Sustained Virologic Response
Viral Load - drug effects
Viral Nonstructural Proteins - genetics
Title Hepatitis C virus NS5A region mutation in chronic hepatitis C genotype 1 patients who are non-responders to two or more treatments and its relationship with response to a new treatment
URI https://www.ncbi.nlm.nih.gov/pubmed/28740342
https://pubmed.ncbi.nlm.nih.gov/PMC5504369
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