Estimation of metabolic fluxes distribution in Saccharomyces cerevisiae during the production of volatile compounds of Tequila
A stoichiometric model for Saccharomyces cerevisiae is reconstructed to analyze the continuous fermentation process of agave juice in Tequila production. The metabolic model contains 94 metabolites and 117 biochemical reactions. From the above set of reactions, 93 of them are linked to internal bioc...
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Published in | Mathematical biosciences and engineering : MBE Vol. 18; no. 5; pp. 5094 - 5113 |
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Main Authors | , , , , , |
Format | Journal Article |
Language | English |
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AIMS Press
01.01.2021
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Abstract | A stoichiometric model for Saccharomyces cerevisiae is reconstructed to analyze the continuous fermentation process of agave juice in Tequila production. The metabolic model contains 94 metabolites and 117 biochemical reactions. From the above set of reactions, 93 of them are linked to internal biochemical reactions and 24 are related to transport fluxes between the medium and the cell. The central metabolism of S. cerevisiae includes the synthesis for 20 amino-acids, carbohydrates, lipids, DNA and RNA. Using flux balance analysis (FBA), different physiological states of S. cerevisiae are shown during the fermentative process; these states are compared with experimental data under different dilution rates (0.04-0.12 h$ ^{-1} $). Moreover, the model performs anabolic and catabolic biochemical reactions for the production of higher alcohols. The importance of the Saccharomyces cerevisiae genomic model in the area of alcoholic beverage fermentation is due to the fact that it allows to estimate the metabolic fluxes during the beverage fermentation process and a physiology state of the microorganism. |
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AbstractList | A stoichiometric model for Saccharomyces cerevisiae is reconstructed to analyze the continuous fermentation process of agave juice in Tequila production. The metabolic model contains 94 metabolites and 117 biochemical reactions. From the above set of reactions, 93 of them are linked to internal biochemical reactions and 24 are related to transport fluxes between the medium and the cell. The central metabolism of S. cerevisiae includes the synthesis for 20 amino-acids, carbohydrates, lipids, DNA and RNA. Using flux balance analysis (FBA), different physiological states of S. cerevisiae are shown during the fermentative process; these states are compared with experimental data under different dilution rates (0.04-0.12 h$ ^{-1} $). Moreover, the model performs anabolic and catabolic biochemical reactions for the production of higher alcohols. The importance of the Saccharomyces cerevisiae genomic model in the area of alcoholic beverage fermentation is due to the fact that it allows to estimate the metabolic fluxes during the beverage fermentation process and a physiology state of the microorganism. |
Author | Gómez-Guzmán, Abril Ivette González-Reynoso, Orfil la-Rosa, José Daniel Padilla-de Solís-Pacheco, Josué R. García-Ramírez, Mario Alberto Gschaedler-Mathis, Anne Christine |
Author_xml | – sequence: 1 givenname: José Daniel Padilla-de surname: la-Rosa fullname: la-Rosa, José Daniel Padilla-de – sequence: 2 givenname: Mario Alberto surname: García-Ramírez fullname: García-Ramírez, Mario Alberto – sequence: 3 givenname: Anne Christine surname: Gschaedler-Mathis fullname: Gschaedler-Mathis, Anne Christine – sequence: 4 givenname: Abril Ivette surname: Gómez-Guzmán fullname: Gómez-Guzmán, Abril Ivette – sequence: 5 givenname: Josué R. surname: Solís-Pacheco fullname: Solís-Pacheco, Josué R. – sequence: 6 givenname: Orfil surname: González-Reynoso fullname: González-Reynoso, Orfil |
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Cites_doi | 10.1002/jib.499 10.1186/s13568-016-0180-5 10.1016/j.ymben.2015.09.013 10.1046/j.1462-2920.2002.00282.x 10.1016/j.ijfoodmicro.2011.08.008 10.1016/j.lwt.2014.08.005 10.1016/j.jbiosc.2011.12.015 10.1093/database/bat059 10.1186/1471-2164-5-1 10.1186/1752-0509-2-1 10.1016/j.meteno.2016.05.002 10.1016/j.synbio.2017.02.002 10.1186/1752-0509-3-1 10.1101/gr.3992505 10.1016/j.femsyr.2003.12.004 10.1073/pnas.2235812100 10.1038/nbt.2870 10.1111/1750-3841.14031 10.1099/00221287-143-1-203 10.1021/jf9504172 10.1038/nbt.1614 10.1016/B978-012666260-3/50002-9 10.1101/gr.234503 10.1186/1752-0509-7-1 10.1023/A:1018362919846 10.1128/AEM.69.7.4076-4086.2003 10.1002/jsfa.3820 10.1016/j.copbio.2014.12.013 10.3109/07388559509150529 10.1016/j.biosystems.2016.06.001 |
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Title | Estimation of metabolic fluxes distribution in Saccharomyces cerevisiae during the production of volatile compounds of Tequila |
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