Structural analysis of broiler chicken small intestinal mucin O-glycan modification by Clostridium perfringens

Clostridium perfringens is a Gram-positive opportunistic pathogen that is the principal etiological agent of necrotic enteritis (NE) in poultry. The ability of C. perfringens to incite NE depends upon its ability to penetrate the protective mucus barrier within the small intestine, which is largely...

Full description

Saved in:
Bibliographic Details
Published inPoultry science Vol. 98; no. 10; pp. 5074 - 5088
Main Authors MacMillan, Jaclyn L, Vicaretti, Sara D, Noyovitz, Benjamin, Xing, Xiaohui, Low, Kristin E, Inglis, G Douglas, Zaytsoff, Sarah J.M., Boraston, Alisdair B, Smith, Steven P, Uwiera, Richard R.E., Selinger, L Brent, Zandberg, Wesley F, Abbott, D Wade
Format Journal Article
LanguageEnglish
Published England Elsevier Inc 01.10.2019
Poultry Science Association, Inc
Subjects
Online AccessGet full text

Cover

Loading…
Abstract Clostridium perfringens is a Gram-positive opportunistic pathogen that is the principal etiological agent of necrotic enteritis (NE) in poultry. The ability of C. perfringens to incite NE depends upon its ability to penetrate the protective mucus barrier within the small intestine, which is largely composed of heavily glycosylated proteins called mucins. Mucins are decorated by N- and O-linked glycans that serve both as a formidable gel-like barrier against invading pathogens and as a rich carbon source for mucolytic bacteria. The composition of avian O-linked glycans is markedly different from mucins in other vertebrates, being enriched in sulfated monosaccharides and N-acetyl-d-neuraminic acid (Neu5Ac, sialic acid). These modifications increase the overall negative charge of mucins and are believed to impede colonization by enteric pathogens. The mechanism by which C. perfringens penetrates the poultry intestinal mucus layer during NE is still unknown. However, the CAZome (i.e., the total collection of proteins encoded within a genome active on carbohydrates) of C. perfringens strain CP1 encodes several putative and known enzymes with activities consistent with the modification of mucin. To further investigate this relationship, O-glycans from Gallus gallus domesticus mucus were extracted from the small intestine and characterized using gas chromatography-mass spectrometry and liquid chromatography-mass spectrometry. Chicken mucin monosaccharides included l-fucose (Fuc), d-mannose (Man), d-galactose (Gal), N-acetyl-d-galactosamine (GalNAc), N-acetyl-d-glucosamine (GlcNAc), and Neu5Ac (sialic acid). Using these monosaccharides as sole carbon sources, we showed that C. perfringens CP1 grew on Neu5Ac, Man, Gal, and GlcNAc but not on Fuc and GalNAc. We also demonstrated C. perfringens grew on different native-state preparations of intestinal mucins and mucus including porcine mucins, chicken mucus, and chicken mucins. Finally, anaerobic incubation of chicken mucin O-glycans with C. perfringens and subsequent analysis of the glycans revealed that there was preferential removal of Neu5Ac. These observations are discussed in the context of the predicted metabolic potential of C. perfringens CP1 and the mucolytic enzymes encoded within its CAZome.
AbstractList ABSTRACT Clostridium perfringens is a Gram-positive opportunistic pathogen that is the principal etiological agent of necrotic enteritis (NE) in poultry. The ability of C. perfringens to incite NE depends upon its ability to penetrate the protective mucus barrier within the small intestine, which is largely composed of heavily glycosylated proteins called mucins. Mucins are decorated by N- and O-linked glycans that serve both as a formidable gel-like barrier against invading pathogens and as a rich carbon source for mucolytic bacteria. The composition of avian O-linked glycans is markedly different from mucins in other vertebrates, being enriched in sulfated monosaccharides and N-acetyl-d-neuraminic acid (Neu5Ac, sialic acid). These modifications increase the overall negative charge of mucins and are believed to impede colonization by enteric pathogens. The mechanism by which C. perfringens penetrates the poultry intestinal mucus layer during NE is still unknown. However, the CAZome (i.e., the total collection of proteins encoded within a genome active on carbohydrates) of C. perfringens strain CP1 encodes several putative and known enzymes with activities consistent with the modification of mucin. To further investigate this relationship, O-glycans from Gallus gallus domesticus mucus were extracted from the small intestine and characterized using gas chromatography-mass spectrometry and liquid chromatography-mass spectrometry. Chicken mucin monosaccharides included l-fucose (Fuc), d-mannose (Man), d-galactose (Gal), N-acetyl-d-galactosamine (GalNAc), N-acetyl-d-glucosamine (GlcNAc), and Neu5Ac (sialic acid). Using these monosaccharides as sole carbon sources, we showed that C. perfringens CP1 grew on Neu5Ac, Man, Gal, and GlcNAc but not on Fuc and GalNAc. We also demonstrated C. perfringens grew on different native-state preparations of intestinal mucins and mucus including porcine mucins, chicken mucus, and chicken mucins. Finally, anaerobic incubation of chicken mucin O-glycans with C. perfringens and subsequent analysis of the glycans revealed that there was preferential removal of Neu5Ac. These observations are discussed in the context of the predicted metabolic potential of C. perfringens CP1 and the mucolytic enzymes encoded within its CAZome.
Clostridium perfringens is a Gram-positive opportunistic pathogen that is the principal etiological agent of necrotic enteritis (NE) in poultry. The ability of C. perfringens to incite NE depends upon its ability to penetrate the protective mucus barrier within the small intestine, which is largely composed of heavily glycosylated proteins called mucins. Mucins are decorated by N- and O-linked glycans that serve both as a formidable gel-like barrier against invading pathogens and as a rich carbon source for mucolytic bacteria. The composition of avian O-linked glycans is markedly different from mucins in other vertebrates, being enriched in sulfated monosaccharides and N-acetyl-d-neuraminic acid (Neu5Ac, sialic acid). These modifications increase the overall negative charge of mucins and are believed to impede colonization by enteric pathogens. The mechanism by which C. perfringens penetrates the poultry intestinal mucus layer during NE is still unknown. However, the CAZome (i.e., the total collection of proteins encoded within a genome active on carbohydrates) of C. perfringens strain CP1 encodes several putative and known enzymes with activities consistent with the modification of mucin. To further investigate this relationship, O-glycans from Gallus gallus domesticus mucus were extracted from the small intestine and characterized using gas chromatography-mass spectrometry and liquid chromatography-mass spectrometry. Chicken mucin monosaccharides included l-fucose (Fuc), d-mannose (Man), d-galactose (Gal), N-acetyl-d-galactosamine (GalNAc), N-acetyl-d-glucosamine (GlcNAc), and Neu5Ac (sialic acid). Using these monosaccharides as sole carbon sources, we showed that C. perfringens CP1 grew on Neu5Ac, Man, Gal, and GlcNAc but not on Fuc and GalNAc. We also demonstrated C. perfringens grew on different native-state preparations of intestinal mucins and mucus including porcine mucins, chicken mucus, and chicken mucins. Finally, anaerobic incubation of chicken mucin O-glycans with C. perfringens and subsequent analysis of the glycans revealed that there was preferential removal of Neu5Ac. These observations are discussed in the context of the predicted metabolic potential of C. perfringens CP1 and the mucolytic enzymes encoded within its CAZome.
Author Vicaretti, Sara D
Uwiera, Richard R.E.
Xing, Xiaohui
Boraston, Alisdair B
Smith, Steven P
Zandberg, Wesley F
Selinger, L Brent
Low, Kristin E
MacMillan, Jaclyn L
Inglis, G Douglas
Abbott, D Wade
Zaytsoff, Sarah J.M.
Noyovitz, Benjamin
Author_xml – sequence: 1
  givenname: Jaclyn L
  surname: MacMillan
  fullname: MacMillan, Jaclyn L
  organization: Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, Alberta, T1J 4B1, Canada
– sequence: 2
  givenname: Sara D
  surname: Vicaretti
  fullname: Vicaretti, Sara D
  organization: Department of Chemistry, University of British Columbia Okanagan, Kelowna, British Columbia, V1V 1V7, Canada
– sequence: 3
  givenname: Benjamin
  surname: Noyovitz
  fullname: Noyovitz, Benjamin
  organization: Department of Chemistry, University of British Columbia Okanagan, Kelowna, British Columbia, V1V 1V7, Canada
– sequence: 4
  givenname: Xiaohui
  surname: Xing
  fullname: Xing, Xiaohui
  organization: Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, Alberta, T1J 4B1, Canada
– sequence: 5
  givenname: Kristin E
  orcidid: 0000-0003-1093-0044
  surname: Low
  fullname: Low, Kristin E
  organization: Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, Alberta, T1J 4B1, Canada
– sequence: 6
  givenname: G Douglas
  surname: Inglis
  fullname: Inglis, G Douglas
  organization: Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, Alberta, T1J 4B1, Canada
– sequence: 7
  givenname: Sarah J.M.
  surname: Zaytsoff
  fullname: Zaytsoff, Sarah J.M.
  organization: Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, Alberta, T1J 4B1, Canada
– sequence: 8
  givenname: Alisdair B
  surname: Boraston
  fullname: Boraston, Alisdair B
  organization: Faculty of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, V8P 5C2, Canada
– sequence: 9
  givenname: Steven P
  surname: Smith
  fullname: Smith, Steven P
  organization: Department of Biomedical and Molecular Sciences, Queen's University, Kingston, Ontario, K7L 3N6, Canada
– sequence: 10
  givenname: Richard R.E.
  surname: Uwiera
  fullname: Uwiera, Richard R.E.
  organization: Department of Agricultural, Food, and Nutritional Science, University of Alberta, Edmonton, Alberta, T6G 2P5, Canada
– sequence: 11
  givenname: L Brent
  surname: Selinger
  fullname: Selinger, L Brent
  organization: Department of Biological Sciences, University of Lethbridge, Lethbridge, Alberta, T1K 3M4, Canada
– sequence: 12
  givenname: Wesley F
  surname: Zandberg
  fullname: Zandberg, Wesley F
  email: wesley.zandberg@ubc.ca
  organization: Department of Chemistry, University of British Columbia Okanagan, Kelowna, British Columbia, V1V 1V7, Canada
– sequence: 13
  givenname: D Wade
  surname: Abbott
  fullname: Abbott, D Wade
  email: wade.abbott@canada.ca
  organization: Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, Alberta, T1J 4B1, Canada
BackLink https://www.ncbi.nlm.nih.gov/pubmed/31180129$$D View this record in MEDLINE/PubMed
BookMark eNp90D9P3TAUBXCroioP2oEvUHnoQIeA_5D4eayeSlsJiQGYLce-hlscO7WTSq-fnlShTBXTXX7n6OockYOUExBywtmZlFtxPtbzEf4Ird6QDW9F20iu-AHZMCZF0yrND8lRrT8ZE7zr1DtyKDnfMi70hqSbqcxumouN1CYb9xUrzYH2JWOEQt0DukdItA42Roppgjrh4ugwO0z0urmPe2cTHbLHgM5OmBPt93QXc50KepwHOkIJBdM9pPqevA02VvjwfI_J3eXX29335ur624_dl6vGSS2nJrCLXjHQyvUefBA99LwHaB3rHG8D6JaL7VZpx70QmneqDd53HfedAK6ClcfkdO0dS_41Lz-bAauDGG2CPFezpITWSlyohX5eqSu51gLBjAUHW_aGM_N3XjNWs8672I_PtXM_gH-R__ZcwKcV5Hl8tUeuDJYNfiMUUx1CcuCxgJuMz_if1BNHbZnQ
CitedBy_id crossref_primary_10_1016_j_jff_2024_106269
crossref_primary_10_1016_j_psj_2022_101726
crossref_primary_10_1093_glycob_cwaa050
crossref_primary_10_1186_s40168_020_00975_x
crossref_primary_10_2478_fv_2024_0020
crossref_primary_10_1099_mic_0_001157
crossref_primary_10_3390_microorganisms7120596
crossref_primary_10_3390_ani11020495
crossref_primary_10_3390_pathogens11090972
crossref_primary_10_1016_j_anifeedsci_2023_115760
crossref_primary_10_3389_fimmu_2021_745849
crossref_primary_10_1186_s13099_020_00362_9
crossref_primary_10_1016_j_carbpol_2021_117651
crossref_primary_10_1016_j_biotechadv_2023_108245
crossref_primary_10_3390_ani11123491
crossref_primary_10_3390_microorganisms8101518
crossref_primary_10_1016_j_jbc_2024_105675
crossref_primary_10_1016_j_vetmic_2022_109371
crossref_primary_10_1017_S146625232100013X
Cites_doi 10.1042/BST20150226
10.1371/journal.ppat.1006263
10.1093/ajcn/76.5.1117
10.1016/j.carbpol.2013.04.072
10.1111/j.1462-5822.2012.01807.x
10.1093/ajcn/25.12.1324
10.1042/bj3260911
10.1093/hmg/ddi351
10.1016/S0966-842X(98)01430-9
10.1073/pnas.1615141114
10.1099/jmm.0.019315-0
10.1128/MR.55.4.621-648.1991
10.1042/cs0820447
10.1074/jbc.M602504200
10.1093/glycob/cws072
10.1002/jobm.201500582
10.1021/ac015534c
10.1038/nrmicro2538
10.1038/ncomms9141
10.1074/jbc.M710247200
10.1021/bi701317g
10.1093/glycob/10.7.669
10.1074/mcp.M114.044867
10.1021/acs.jafc.8b01042
10.1093/nar/gkh340
10.1093/glycob/cwr165
10.1371/journal.pone.0003952
10.1186/s13068-018-1027-x
10.1073/pnas.1706306114
10.3390/pathogens2010055
10.1016/j.cell.2016.05.041
10.1016/j.chom.2008.09.007
10.1093/glycob/cwn053
10.1128/AEM.51.5.1104-1109.1986
10.1073/pnas.0803154105
10.1073/pnas.022493799
10.1093/glycob/cwv091
10.1021/acs.jafc.8b01041
10.1128/JB.01032-12
10.3389/fgene.2017.00111
10.1128/IAI.00279-09
10.1016/j.sbi.2014.07.002
10.1093/nar/gkt1178
10.1016/S1097-2765(02)00680-9
10.1016/j.sbi.2012.07.009
10.1645/GE-1066R.1
10.1016/S0065-2318(10)64007-3
10.1016/j.chom.2018.05.012
10.1371/journal.pone.0171606
10.1186/s13099-017-0217-6
10.1371/journal.pone.0009490
10.3389/fgene.2015.00081
10.4161/gmic.26945
10.1016/S1074-5521(02)00175-8
10.1128/AM.22.4.688-692.1971
10.1038/nature12503
10.1128/AM.22.4.738-739.1971
10.1038/nmeth.3861
10.1016/j.cocis.2005.11.001
10.1093/bioinformatics/btr088
10.1016/S0969-2126(01)00220-9
10.1128/AEM.43.2.325-330.1982
10.1371/journal.pone.0033524
10.1093/jn/134.4.736
10.1515/bchm2.1976.357.1.839
10.3389/fcimb.2017.00387
10.1093/glycob/2.6.509
10.4161/gmic.1.1.10386
10.1096/fasebj.7.13.8405811
10.1007/BF00731190
10.1074/jbc.M808954200
10.1016/j.tim.2017.09.011
10.1080/19490976.2016.1186334
10.1128/JB.181.15.4526-4532.1999
10.1093/glycob/cwt045
10.1371/journal.ppat.1006218
10.3390/toxins8110341
10.1038/mi.2008.5
10.1128/JB.187.5.1543-1551.2005
10.1371/journal.ppat.1004787
10.1128/AEM.03440-13
10.1093/nar/gkn663
10.1023/A:1006983125913
10.3382/ps/pew372
10.1080/03079457.2016.1139688
ContentType Journal Article
Copyright 2019 Poultry Science Association Inc.
2019 Poultry Science Association Inc. 2019
Copyright_xml – notice: 2019 Poultry Science Association Inc.
– notice: 2019 Poultry Science Association Inc. 2019
DBID 6I.
AAFTH
CGR
CUY
CVF
ECM
EIF
NPM
AAYXX
CITATION
7X8
DOI 10.3382/ps/pez297
DatabaseName ScienceDirect Open Access Titles
Elsevier:ScienceDirect:Open Access
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
CrossRef
MEDLINE - Academic
DatabaseTitle MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
CrossRef
MEDLINE - Academic
DatabaseTitleList

MEDLINE
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
DeliveryMethod fulltext_linktorsrc
Discipline Agriculture
EISSN 1525-3171
EndPage 5088
ExternalDocumentID 10_3382_ps_pez297
31180129
10.3382/ps/pez297
S0032579119480280
Genre Journal Article
GrantInformation_xml – fundername: Alberta Agriculture and Forestry with Alberta Chicken Producers
  grantid: 2014R061R
– fundername: NSERC’s Discovery
  grantid: 03929
– fundername: Canadian Foundation for Innovation
– fundername: GlycoNet
  grantid: AM-1
  funderid: 10.13039/501100009056
– fundername: Natural Sciences and Engineering Research Council of Canada
  funderid: 10.13039/501100000038
– fundername: BC Knowledge Development Fund
  grantid: 35246
GroupedDBID ---
0R~
0SF
123
18M
2WC
4.4
48X
53G
5RE
5VS
6I.
AABJS
AABMN
AAEDW
AAESY
AAFTH
AAIMJ
AAIYJ
AAJQQ
AAMDB
AAMVS
AAOGV
AAXUO
ABCQX
ABEUO
ABIXL
ABJNI
ABQLI
ACGFO
ACGFS
ACIWK
ACLIJ
ACUFI
ADBBV
ADEIU
ADHKW
ADHZD
ADORX
ADQLU
ADRIX
ADRTK
ADYVW
AEGPL
AEGXH
AEJOX
AEKSI
AEMDU
AENEX
AENZO
AEPUE
AEWNT
AEXQZ
AFIYH
AFOFC
AFRAH
AFXEN
AGINJ
AGSYK
AHMBA
AIAGR
AIKOY
AITUG
AKWXX
ALMA_UNASSIGNED_HOLDINGS
ALUQC
APIBT
ARIXL
AVWKF
AXUDD
AYOIW
AZQFJ
BAWUL
BAYMD
BEYMZ
BHONS
BQDIO
BSWAC
BYORX
CASEJ
CDBKE
CKLRP
CS3
DAKXR
DIK
DILTD
DPPUQ
DU5
E3Z
EBS
EJD
F5P
F9R
FDB
GJXCC
GROUPED_DOAJ
HAR
HF~
INIJC
J21
KQ8
KSI
KSN
L7B
NCXOZ
NLBLG
O9-
OAWHX
ODMLO
OJQWA
OK1
OVD
P2P
PAFKI
PEELM
Q5Y
ROL
ROX
ROZ
RPM
RXO
SJN
TEORI
TLC
TPS
TR2
TWZ
W8F
WOQ
Y6R
YAYTL
YKOAZ
~KM
AAHBH
AALRI
ADVLN
AGKRT
AKRWK
ALIPV
AMRAJ
AFJKZ
CGR
CUY
CVF
ECM
EIF
NPM
.GJ
1TH
29O
3V.
7X2
7X7
7XC
88E
8FE
8FG
8FH
8FI
8FJ
8FW
8R4
8R5
AAUQX
AAYXX
ABJCF
ABSAR
ABSMQ
ABUWG
AFKRA
ASAOO
ATCPS
ATDFG
BENPR
BGLVJ
BHPHI
BPHCQ
BVXVI
CCPQU
CITATION
CXTWN
DFGAJ
FYUFA
H13
HCIFZ
HMCUK
H~9
L6V
M0K
M1P
M7S
MBTAY
NVLIB
OHT
PATMY
PQQKQ
PROAC
PSQYO
PTHSS
PYCSY
Q2X
S0X
TCN
UKHRP
XOL
ZXP
7X8
ID FETCH-LOGICAL-c393t-f04b70e97cbdedf2beb1bee5c06c15fe95128879c1d2291675fdd661d62e17fa3
ISSN 0032-5791
IngestDate Fri Jul 26 21:06:18 EDT 2024
Thu Sep 26 15:43:59 EDT 2024
Sat Sep 28 08:31:42 EDT 2024
Wed Aug 28 03:18:57 EDT 2024
Fri Feb 23 02:48:00 EST 2024
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 10
Keywords Clostridium
carbohydrate chromatography
mass spectrometry
mucin O-glycan
intestinal mucus
glycan
mucin
Language English
License http://creativecommons.org/licenses/by-nc-nd/4.0
This article is published and distributed under the terms of the Oxford University Press, Standard Journals Publication Model (https://academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model)
2019 Poultry Science Association Inc.
LinkModel OpenURL
MergedId FETCHMERGED-LOGICAL-c393t-f04b70e97cbdedf2beb1bee5c06c15fe95128879c1d2291675fdd661d62e17fa3
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ORCID 0000-0003-1093-0044
OpenAccessLink https://dx.doi.org/10.3382/ps/pez297
PMID 31180129
PQID 2292997247
PQPubID 23479
PageCount 15
ParticipantIDs proquest_miscellaneous_2292997247
crossref_primary_10_3382_ps_pez297
pubmed_primary_31180129
oup_primary_10_3382_ps_pez297
elsevier_sciencedirect_doi_10_3382_ps_pez297
PublicationCentury 2000
PublicationDate 2019-10-01
20191001
2019-Oct-01
2019-10-00
PublicationDateYYYYMMDD 2019-10-01
PublicationDate_xml – month: 10
  year: 2019
  text: 2019-10-01
  day: 01
PublicationDecade 2010
PublicationPlace England
PublicationPlace_xml – name: England
PublicationTitle Poultry science
PublicationTitleAlternate Poult Sci
PublicationYear 2019
Publisher Elsevier Inc
Poultry Science Association, Inc
Publisher_xml – name: Elsevier Inc
– name: Poultry Science Association, Inc
References Pan, Yu (bib64) 2014; 5
Almagro-Moreno, Boyd (bib5) 2009; 77
Karlsson, Nordman, Karlsson, Carlstedt, Hansson (bib41) 1997; 326
Smirnov, Sklan, Uni (bib77) 2004; 134
Brockhausen, Stanley (bib14) 2015
Xiao, Xiang, Zhou, Chen, Li, Yang (bib90) 2017; 96
Ficko-Blean, Boraston (bib28) 2012; 22
Manzi, Norgard-Sumnicht, Argade, Marth, van Halbeek, Varki (bib53) 2000; 10
Almagro-Moreno, Pruss, Taylor (bib7) 2015; 11
Corfield (bib20) 1992; 2
Sardiello, Annunziata, Roma, Ballabio (bib74) 2005; 14
Lepp, Gong, Songer, Boerlin, Parreira, Prescott (bib44) 2013; 195
Corfield, Wagner, O’Donnell, Durdey, Mountford, Clamp (bib19) 1993; 10
Makki, Deehan, Walter, Backhed (bib52) 2018; 23
Koh, De Vadder, Kovatcheva-Datchary, Backhed (bib43) 2016; 165
McGuckin, Linden, Sutton, Florin (bib55) 2011; 9
Stanley, Ram, Wilkinson, Roberton (bib80) 1986; 51
Crost, Tailford, Monestier, Swarbreck, Henrissat, Crossman, Juge (bib21) 2016; 7
Linden, Florin, McGuckin (bib49) 2008; 3
Etzold, Juge (bib26) 2014; 28
Varki, Cummings, Aebi, Packer, Seeberger, Esko, Stanley, Hart, Darvill, Kinoshita, Prestegard, Schnaar, Freeze, Marth, Bertozzi, Etzler, Frank, Vliegenthart, Lutteke, Perez, Bolton, Rudd, Paulson, Kanehisa, Toukach, Aoki-Kinoshita, Dell, Narimatsu, York, Taniguchi, Kornfeld (bib86) 2015; 25
Rood, Cole (bib72) 1991; 55
Song, Ju, Lasanajak, Kudelka, Smith, Cummings (bib78) 2016; 13
Colli (bib18) 1993; 7
Li, Yan, Lillehoj (bib46) 2017; 9
Sicard, Le Bihan, Vogeleer, Jacques, Harel (bib76) 2017; 7
Lewis, Lewis (bib45) 2012; 14
Tailford, Crost, Kavanaugh, Juge (bib82) 2015; 6
Nees, Schauer, Mayer (bib58) 1976; 357
Petit, Gibert, Popoff (bib65) 1999; 7
Rho, Wright, Christie, Clinch, Furneaux, Roberton (bib69) 2005; 187
Juge, Tailford, Owen (bib39) 2016; 44
Price, Dehal, Arkin (bib67) 2010; 5
Prescott, Parreira, Mehdizadeh Gohari, Lepp, Gong (bib66) 2016; 45
Deplancke, Vidal, Ganessunker, Donovan, Mackie, Gaskins (bib24) 2002; 76
Linden, Sutton, Karlsson, Korolik, McGuckin (bib50) 2008; 1
Walters, Stirewalt, Melville (bib88) 1999; 181
Bergfeld, Lawrence, Diaz, Pearce, Ghaderi, Gagneux, Leakey, Varki (bib10) 2017; 114
Lombard, Golaconda Ramulu, Drula, Coutinho, Henrissat (bib51) 2014; 42
Li, McClane (bib47) 2014; 80
Hasnain, Dawson, Lourie, Hutson, Tong, Grencis, McGuckin, Thornton (bib35) 2017; 13
Mougous, Green, Williams, Brenner, Bertozzi (bib57) 2002; 9
Ficko-Blean, Stuart, Suits, Cid, Tessier, Woods, Boraston (bib31) 2012; 7
Riha, Solberg (bib70) 1971; 22
Rossez, Maes, Lefebvre Darroman, Gosset, Ecobichon, Joncquel Chevalier Curt, Boneca, Michalski, Robbe-Masselot (bib73) 2012; 22
Wylie, Zandberg (bib89) 2018; 66
Li, Uzal, McClane (bib48) 2016; 8
Berteau, Guillot, Benjdia, Rabot (bib12) 2006; 281
Ng, Ferreyra, Higginbottom, Lynch, Kashyap, Gopinath, Naidu, Choudhury, Weimer, Monack, Sonnenburg (bib60) 2013; 502
Vicaretti, Mohtarudin, Garner, Zandberg (bib87) 2018; 66
Alemka, Whelan, Gough, Clyne, Gallagher, Carrington, Bourke (bib4) 2010; 59
Martens, Chiang, Gordon (bib54) 2008; 4
Darriba, Taboada, Doallo, Posada (bib22) 2011; 27
Fan, Zhang, Chen, Lu, Xu, Xiao (bib27) 2016; 56
Shimizu, Ohtani, Hirakawa, Ohshima, Yamashita, Shiba, Ogasawara, Hattori, Kuhara, Hayashi (bib75) 2002; 99
Davies, Henrissat (bib23) 1995; 3
Tsai, Sunderland, Gibson, Hart, Rhodes (bib85) 1992; 82
Stanley, Taniguchi, Aebi (bib79) 2017
Bryant (bib15) 1972; 25
Taylor, McGuckin, Wesselingh, Rogers (bib83) 2018; 26
Boraston, Ficko-Blean, Healey (bib13) 2007; 46
Ficko-Blean, Gregg, Adams, Hehemann, Czjzek, Smith, Boraston (bib30) 2009; 284
Kim, Khan (bib42) 2013; 2
Bergstrom, Xia (bib11) 2013; 23
Huang, Mechref, Novotny (bib36) 2001; 73
Ravcheev, Thiele (bib68) 2017; 8
Grondin, Duan, Kirlin, Abe, Chitayat, Spencer, Spencer, Campigotto, Houliston, Arrowsmith, Allingham, Boraston, Smith (bib33) 2017; 12
Packer, Lawson, Jardine, Redmond (bib63) 1998; 15
Almagro-Moreno, Boyd (bib6) 2010; 1
Noach, Ficko-Blean, Pluvinage, Stuart, Jenkins, Brochu, Buenbrazo, Wakarchuk, Burke, Gilbert, Boraston (bib62) 2017; 114
Harmon, Kautter, Peeler (bib34) 1971; 22
Bansil, Turner (bib9) 2006; 11
Tierney, Matthews, Carrington, Mulcahy (bib84) 2007; 93
Adams, Gregg, Bayer, Boraston, Smith (bib1) 2008; 105
Ficko-Blean, Boraston (bib29) 2012; 22
Edgar (bib25) 2004; 32
Flores-Díaz, Barquero-Calvo, Ramírez, Alape-Girón (bib32) 2016
Huang, Chassard, Hausmann, von Itzstein, Hennet (bib37) 2015; 6
Albalasmeh, Berhe, Ghezzehei (bib3) 2013; 97
Roberton, Stanley (bib71) 1982; 43
Al-Saedi, Vaz, Stones, Krachler (bib2) 2017
Cantarel, Coutinho, Rancurel, Bernard, Lombard, Henrissat (bib17) 2009; 37
Kahya, Andrew, Yesilkaya (bib40) 2017; 13
Ashida, Maki, Ozawa, Tani, Kiyohara, Fujita, Imamura, Ishida, Kiso, Yamamoto (bib8) 2008; 18
Monti, Bonten, D’Azzo, Bresciani, Venerando, Borsani, Schauer, Tettamanti (bib56) 2010; 64
Niilo (bib61) 1980; 21
Newstead, Potter, Wilson, Xu, Chien, Watts, Withers, Taylor (bib59) 2008; 283
Buschiazzo, Amaya, Cremona, Frasch, Alzari (bib16) 2002; 10
Struwe, Gough, Gallagher, Kenny, Carrington, Karlsson, Rudd (bib81) 2015; 14
Jones, Thomas, Alger, Ghavidel, Inglis, Abbott (bib38) 2018; 11
Brockhausen (10.3382/ps/pez297_bib14) 2015
Linden (10.3382/ps/pez297_bib50) 2008; 1
Almagro-Moreno (10.3382/ps/pez297_bib7) 2015; 11
Cantarel (10.3382/ps/pez297_bib17) 2009; 37
Vicaretti (10.3382/ps/pez297_bib87) 2018; 66
Bansil (10.3382/ps/pez297_bib9) 2006; 11
Hasnain (10.3382/ps/pez297_bib35) 2017; 13
Song (10.3382/ps/pez297_bib78) 2016; 13
Struwe (10.3382/ps/pez297_bib81) 2015; 14
Koh (10.3382/ps/pez297_bib43) 2016; 165
Ng (10.3382/ps/pez297_bib60) 2013; 502
Flores-Díaz (10.3382/ps/pez297_bib32) 2016
Newstead (10.3382/ps/pez297_bib59) 2008; 283
Lewis (10.3382/ps/pez297_bib45) 2012; 14
Ashida (10.3382/ps/pez297_bib8) 2008; 18
Mougous (10.3382/ps/pez297_bib57) 2002; 9
Colli (10.3382/ps/pez297_bib18) 1993; 7
Varki (10.3382/ps/pez297_bib86) 2015; 25
Fan (10.3382/ps/pez297_bib27) 2016; 56
Boraston (10.3382/ps/pez297_bib13) 2007; 46
Karlsson (10.3382/ps/pez297_bib41) 1997; 326
Adams (10.3382/ps/pez297_bib1) 2008; 105
Berteau (10.3382/ps/pez297_bib12) 2006; 281
Kim (10.3382/ps/pez297_bib42) 2013; 2
Smirnov (10.3382/ps/pez297_bib77) 2004; 134
Jones (10.3382/ps/pez297_bib38) 2018; 11
Davies (10.3382/ps/pez297_bib23) 1995; 3
Deplancke (10.3382/ps/pez297_bib24) 2002; 76
Grondin (10.3382/ps/pez297_bib33) 2017; 12
Petit (10.3382/ps/pez297_bib65) 1999; 7
Corfield (10.3382/ps/pez297_bib19) 1993; 10
Juge (10.3382/ps/pez297_bib39) 2016; 44
Tailford (10.3382/ps/pez297_bib82) 2015; 6
Rossez (10.3382/ps/pez297_bib73) 2012; 22
Price (10.3382/ps/pez297_bib67) 2010; 5
Sardiello (10.3382/ps/pez297_bib74) 2005; 14
Niilo (10.3382/ps/pez297_bib61) 1980; 21
Albalasmeh (10.3382/ps/pez297_bib3) 2013; 97
Al-Saedi (10.3382/ps/pez297_bib2) 2017
Makki (10.3382/ps/pez297_bib52) 2018; 23
Harmon (10.3382/ps/pez297_bib34) 1971; 22
Monti (10.3382/ps/pez297_bib56) 2010; 64
Ficko-Blean (10.3382/ps/pez297_bib28) 2012; 22
Kahya (10.3382/ps/pez297_bib40) 2017; 13
Etzold (10.3382/ps/pez297_bib26) 2014; 28
Manzi (10.3382/ps/pez297_bib53) 2000; 10
Stanley (10.3382/ps/pez297_bib80) 1986; 51
Wylie (10.3382/ps/pez297_bib89) 2018; 66
Lombard (10.3382/ps/pez297_bib51) 2014; 42
Almagro-Moreno (10.3382/ps/pez297_bib6) 2010; 1
Huang (10.3382/ps/pez297_bib37) 2015; 6
Roberton (10.3382/ps/pez297_bib71) 1982; 43
Bryant (10.3382/ps/pez297_bib15) 1972; 25
Huang (10.3382/ps/pez297_bib36) 2001; 73
Noach (10.3382/ps/pez297_bib62) 2017; 114
McGuckin (10.3382/ps/pez297_bib55) 2011; 9
Riha (10.3382/ps/pez297_bib70) 1971; 22
Edgar (10.3382/ps/pez297_bib25) 2004; 32
Lepp (10.3382/ps/pez297_bib44) 2013; 195
Li (10.3382/ps/pez297_bib48) 2016; 8
Tsai (10.3382/ps/pez297_bib85) 1992; 82
Xiao (10.3382/ps/pez297_bib90) 2017; 96
Buschiazzo (10.3382/ps/pez297_bib16) 2002; 10
Ficko-Blean (10.3382/ps/pez297_bib31) 2012; 7
Linden (10.3382/ps/pez297_bib49) 2008; 3
Prescott (10.3382/ps/pez297_bib66) 2016; 45
Sicard (10.3382/ps/pez297_bib76) 2017; 7
Nees (10.3382/ps/pez297_bib58) 1976; 357
Bergstrom (10.3382/ps/pez297_bib11) 2013; 23
Ravcheev (10.3382/ps/pez297_bib68) 2017; 8
Taylor (10.3382/ps/pez297_bib83) 2018; 26
Crost (10.3382/ps/pez297_bib21) 2016; 7
Li (10.3382/ps/pez297_bib46) 2017; 9
Packer (10.3382/ps/pez297_bib63) 1998; 15
Rho (10.3382/ps/pez297_bib69) 2005; 187
Walters (10.3382/ps/pez297_bib88) 1999; 181
Tierney (10.3382/ps/pez297_bib84) 2007; 93
Martens (10.3382/ps/pez297_bib54) 2008; 4
Shimizu (10.3382/ps/pez297_bib75) 2002; 99
Ficko-Blean (10.3382/ps/pez297_bib29) 2012; 22
Pan (10.3382/ps/pez297_bib64) 2014; 5
Darriba (10.3382/ps/pez297_bib22) 2011; 27
Li (10.3382/ps/pez297_bib47) 2014; 80
Ficko-Blean (10.3382/ps/pez297_bib30) 2009; 284
Rood (10.3382/ps/pez297_bib72) 1991; 55
Stanley (10.3382/ps/pez297_bib79) 2017
Almagro-Moreno (10.3382/ps/pez297_bib5) 2009; 77
Bergfeld (10.3382/ps/pez297_bib10) 2017; 114
Alemka (10.3382/ps/pez297_bib4) 2010; 59
Corfield (10.3382/ps/pez297_bib20) 1992; 2
References_xml – volume: 23
  start-page: 1026
  year: 2013
  end-page: 1037
  ident: bib11
  article-title: Mucin-type
  publication-title: Glycobiology.
  contributor:
    fullname: Xia
– volume: 22
  start-page: 590
  year: 2012
  end-page: 595
  ident: bib29
  article-title: Structural analysis of a bacterial exo-alpha-D-
  publication-title: Glycobiology.
  contributor:
    fullname: Boraston
– volume: 7
  start-page: e33524
  year: 2012
  ident: bib31
  article-title: Carbohydrate recognition by an architecturally complex alpha-
  publication-title: PLoS One.
  contributor:
    fullname: Boraston
– volume: 1
  start-page: 183
  year: 2008
  end-page: 197
  ident: bib50
  article-title: Mucins in the mucosal barrier to infection
  publication-title: Mucosal. Immunol.
  contributor:
    fullname: McGuckin
– volume: 66
  start-page: 8114
  year: 2018
  end-page: 8123
  ident: bib89
  article-title: Quantitation of sialic acids in infant formulas by liquid chromatography-mass spectrometry: an assessment of different protein sources and discovery of new analogues
  publication-title: J. Agric. Food. Chem.
  contributor:
    fullname: Zandberg
– volume: 9
  start-page: 265
  year: 2011
  end-page: 278
  ident: bib55
  article-title: Mucin dynamics and enteric pathogens
  publication-title: Nat. Rev. Microbiol.
  contributor:
    fullname: Florin
– volume: 22
  start-page: 738
  year: 1971
  end-page: 739
  ident: bib70
  article-title: Chemically defined medium for the growth of
  publication-title: Appl. Microbiol.
  contributor:
    fullname: Solberg
– volume: 6
  start-page: 8141
  year: 2015
  ident: bib37
  article-title: Sialic acid catabolism drives intestinal inflammation and microbial dysbiosis in mice
  publication-title: Nat. Commun.
  contributor:
    fullname: Hennet
– volume: 3
  start-page: 853
  year: 1995
  end-page: 859
  ident: bib23
  article-title: Structures and mechanisms of glycosyl hydrolases
  publication-title: Structure.
  contributor:
    fullname: Henrissat
– volume: 13
  start-page: 528
  year: 2016
  end-page: 534
  ident: bib78
  article-title: Oxidative release of natural glycans for functional glycomics
  publication-title: Nat. Methods.
  contributor:
    fullname: Cummings
– volume: 80
  start-page: 1701
  year: 2014
  end-page: 1709
  ident: bib47
  article-title: The Sialidases of
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: McClane
– volume: 11
  start-page: 164
  year: 2006
  end-page: 170
  ident: bib9
  article-title: Mucin structure, aggregation, physiological functions and biomedical applications
  publication-title: Curr. Opin. Colloid Interface Sci.
  contributor:
    fullname: Turner
– volume: 32
  start-page: 1792
  year: 2004
  end-page: 1797
  ident: bib25
  article-title: MUSCLE: multiple sequence alignment with high accuracy and high throughput
  publication-title: Nucleic Acids Res.
  contributor:
    fullname: Edgar
– volume: 77
  start-page: 3807
  year: 2009
  end-page: 3816
  ident: bib5
  article-title: Sialic acid catabolism confers a competitive advantage to pathogenic
  publication-title: Infect. Immun.
  contributor:
    fullname: Boyd
– volume: 44
  start-page: 166
  year: 2016
  end-page: 175
  ident: bib39
  article-title: Sialidases from gut bacteria: a mini-review
  publication-title: Biochem. Soc. Trans.
  contributor:
    fullname: Owen
– volume: 76
  start-page: 1117
  year: 2002
  end-page: 1125
  ident: bib24
  article-title: Selective growth of mucolytic bacteria including
  publication-title: Am. J. Clin. Nutr.
  contributor:
    fullname: Gaskins
– volume: 7
  start-page: 302
  year: 2016
  end-page: 312
  ident: bib21
  article-title: The mucin-degradation strategy of
  publication-title: Gut Microbes.
  contributor:
    fullname: Juge
– volume: 165
  start-page: 1332
  year: 2016
  end-page: 1345
  ident: bib43
  article-title: From dietary fiber to host physiology: short-chain fatty acids as key bacterial metabolites
  publication-title: Cell.
  contributor:
    fullname: Backhed
– volume: 181
  start-page: 4526
  year: 1999
  end-page: 4532
  ident: bib88
  article-title: Cloning, sequence, and transcriptional regulation of the operon encoding a putative
  publication-title: J. Bacteriol.
  contributor:
    fullname: Melville
– volume: 10
  start-page: 669
  year: 2000
  end-page: 689
  ident: bib53
  article-title: Exploring the glycan repertoire of genetically modified mice by isolation and profiling of the major glycan classes and nano-NMR analysis of glycan mixtures
  publication-title: Glycobiology.
  contributor:
    fullname: Varki
– year: 2017
  ident: bib2
  article-title: A commensal adhesin enhances
  publication-title: bioRxiv
  contributor:
    fullname: Krachler
– volume: 45
  start-page: 288
  year: 2016
  end-page: 294
  ident: bib66
  article-title: The pathogenesis of necrotic enteritis in chickens: what we know and what we need to know: a review
  publication-title: Avian Pathol
  contributor:
    fullname: Gong
– volume: 96
  start-page: 1387
  year: 2017
  end-page: 1393
  ident: bib90
  article-title: Microbial community mapping in intestinal tract of broiler chicken
  publication-title: Poult. Sci.
  contributor:
    fullname: Yang
– volume: 11
  start-page: e1004787
  year: 2015
  ident: bib7
  article-title: Intestinal colonization dynamics of
  publication-title: PLoS Pathog.
  contributor:
    fullname: Taylor
– volume: 43
  start-page: 325
  year: 1982
  end-page: 330
  ident: bib71
  article-title: utilization of mucin by
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Stanley
– volume: 15
  start-page: 737
  year: 1998
  end-page: 747
  ident: bib63
  article-title: A general approach to desalting oligosaccharides released from glycoproteins
  publication-title: Glycoconj. J.
  contributor:
    fullname: Redmond
– volume: 73
  start-page: 6063
  year: 2001
  end-page: 6069
  ident: bib36
  article-title: Microscale nonreductive release of
  publication-title: Anal. Chem.
  contributor:
    fullname: Novotny
– volume: 66
  start-page: 8574
  year: 2018
  end-page: 8583
  ident: bib87
  article-title: Capillary electrophoresis analysis of bovine milk oligosaccharides permits an assessment of the influence of diet and the discovery of nine abundant sulfated analogues
  publication-title: J. Agric. Food Chem.
  contributor:
    fullname: Zandberg
– volume: 6
  start-page: 81
  year: 2015
  ident: bib82
  article-title: Mucin glycan foraging in the human gut microbiome
  publication-title: Front. Genet.
  contributor:
    fullname: Juge
– start-page: 113
  year: 2015
  end-page: 123
  ident: bib14
  article-title: -GalNAc Glycans
  publication-title: Essentials of Glycobiology
  contributor:
    fullname: Stanley
– volume: 21
  start-page: 141
  year: 1980
  end-page: 148
  ident: bib61
  article-title: in animal disease: a review of current knowledge
  publication-title: Can. Vet. J
  contributor:
    fullname: Niilo
– volume: 22
  start-page: 570
  year: 2012
  end-page: 577
  ident: bib28
  article-title: Insights into the recognition of the human glycome by microbial carbohydrate-binding modules
  publication-title: Curr. Opin. Struct. Biol.
  contributor:
    fullname: Boraston
– volume: 11
  start-page: 27
  year: 2018
  end-page: 43
  ident: bib38
  article-title: SACCHARIS: an automated pipeline to streamline discovery of carbohydrate active enzyme activities within polyspecific families and de novo sequence datasets
  publication-title: Biotechnol. Biofuels.
  contributor:
    fullname: Abbott
– volume: 281
  start-page: 22464
  year: 2006
  end-page: 22470
  ident: bib12
  article-title: A new type of bacterial sulfatase reveals a novel maturation pathway in prokaryotes
  publication-title: J. Biol. Chem.
  contributor:
    fullname: Rabot
– volume: 105
  start-page: 12194
  year: 2008
  end-page: 12199
  ident: bib1
  article-title: Structural basis of
  publication-title: Proc. Natl. Acad. Sci.
  contributor:
    fullname: Smith
– volume: 8
  start-page: 341
  year: 2016
  end-page: 356
  ident: bib48
  article-title: sialidases: potential contributors to intestinal pathogenesis and therapeutic targets
  publication-title: Toxins.
  contributor:
    fullname: McClane
– volume: 37
  start-page: D233
  year: 2009
  end-page: D238
  ident: bib17
  article-title: The Carbohydrate-Active EnZymes database (CAZy): an expert resource for glycogenomics
  publication-title: Nucleic Acids Res.
  contributor:
    fullname: Henrissat
– volume: 195
  start-page: 1152
  year: 2013
  end-page: 1166
  ident: bib44
  article-title: Identification of accessory genome regions in poultry
  publication-title: J. Bacteriol.
  contributor:
    fullname: Prescott
– volume: 8
  start-page: 111
  year: 2017
  ident: bib68
  article-title: Comparative genomic analysis of the human gut microbiome reveals a broad distribution of metabolic pathways for the degradation of host-synthetized mucin glycans and utilization of mucin-derived monosaccharides
  publication-title: Front. Genet.
  contributor:
    fullname: Thiele
– volume: 97
  start-page: 253
  year: 2013
  end-page: 261
  ident: bib3
  article-title: A new method for rapid determination of carbohydrate and total carbon concentrations using UV spectrophotometry
  publication-title: Carbohydr. Polym.
  contributor:
    fullname: Ghezzehei
– volume: 82
  start-page: 447
  year: 1992
  end-page: 454
  ident: bib85
  article-title: A novel mucin sulphatase from human faeces: its identification, purification and characterization
  publication-title: Clin. Sci.
  contributor:
    fullname: Rhodes
– start-page: 119
  year: 2016
  end-page: 134
  ident: bib32
  article-title: Role of
  publication-title: Microbial Toxins
  contributor:
    fullname: Alape-Girón
– volume: 22
  start-page: 1193
  year: 2012
  end-page: 1206
  ident: bib73
  article-title: Almost all human gastric mucin
  publication-title: Glycobiology.
  contributor:
    fullname: Robbe-Masselot
– volume: 14
  start-page: 3203
  year: 2005
  end-page: 3217
  ident: bib74
  article-title: Sulfatases and sulfatase modifying factors: an exclusive and promiscuous relationship
  publication-title: Hum. Mol. Genet.
  contributor:
    fullname: Ballabio
– volume: 55
  start-page: 621
  year: 1991
  end-page: 648
  ident: bib72
  article-title: Molecular genetics and pathogenesis of
  publication-title: Microbiol. Rev.
  contributor:
    fullname: Cole
– volume: 3
  start-page: e3952
  year: 2008
  ident: bib49
  article-title: Mucin dynamics in intestinal bacterial infection
  publication-title: PLoS One.
  contributor:
    fullname: McGuckin
– volume: 284
  start-page: 9876
  year: 2009
  end-page: 9884
  ident: bib30
  article-title: Portrait of an enzyme, a complete structural analysis of a multimodular {beta}-N-acetylglucosaminidase from
  publication-title: J. Biol. Chem.
  contributor:
    fullname: Boraston
– volume: 99
  start-page: 996
  year: 2002
  end-page: 1001
  ident: bib75
  article-title: Complete genome sequence of
  publication-title: Proc. Natl. Acad. Sci.
  contributor:
    fullname: Hayashi
– volume: 9
  start-page: 69
  year: 2017
  ident: bib46
  article-title: Complete genome sequences of Clostridium perfringens Del1 strain isolated from chickens affected by necrotic enteritis
  publication-title: Gut. Pathog.
  contributor:
    fullname: Lillehoj
– volume: 42
  start-page: D490
  year: 2014
  end-page: D495
  ident: bib51
  article-title: The carbohydrate-active enzymes database (CAZy) in 2013
  publication-title: Nucl. Acids Res.
  contributor:
    fullname: Henrissat
– volume: 14
  start-page: 1464
  year: 2015
  end-page: 1477
  ident: bib81
  article-title: Identification of
  publication-title: Mol. Cell. Proteomics.
  contributor:
    fullname: Rudd
– volume: 10
  start-page: 757
  year: 2002
  end-page: 768
  ident: bib16
  article-title: The crystal structure and mode of action of trans-sialidase, a key enzyme in Trypanosoma cruzi pathogenesis
  publication-title: Mol. Cell.
  contributor:
    fullname: Alzari
– volume: 14
  start-page: 1174
  year: 2012
  end-page: 1182
  ident: bib45
  article-title: Host sialoglycans and bacterial sialidases: a mucosal perspective
  publication-title: Cell. Microbiol.
  contributor:
    fullname: Lewis
– volume: 56
  start-page: 347
  year: 2016
  end-page: 357
  ident: bib27
  article-title: Cloning, characterization, and production of three alpha-L-fucosidases from
  publication-title: J. Basic Microbiol
  contributor:
    fullname: Xiao
– volume: 134
  start-page: 736
  year: 2004
  end-page: 742
  ident: bib77
  article-title: Mucin dynamics in the chick small intestine are altered by starvation
  publication-title: J. Nutr.
  contributor:
    fullname: Uni
– volume: 12
  start-page: e0171606
  year: 2017
  ident: bib33
  article-title: Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from
  publication-title: PLoS One.
  contributor:
    fullname: Smith
– volume: 326
  start-page: 911
  year: 1997
  end-page: 917
  ident: bib41
  article-title: Glycosylation differences between pig gastric mucin populations: a comparative study of the neutral oligosaccharides using mass spectrometry
  publication-title: Biochem. J.
  contributor:
    fullname: Hansson
– volume: 64
  start-page: 403
  year: 2010
  end-page: 479
  ident: bib56
  article-title: Sialidases in vertebrates: a family of enzymes tailored for several cell functions
  publication-title: Adv. Carbohydr. Chem. Biochem.
  contributor:
    fullname: Tettamanti
– volume: 28
  start-page: 23
  year: 2014
  end-page: 31
  ident: bib26
  article-title: Structural insights into bacterial recognition of intestinal mucins
  publication-title: Curr. Opin. Struct. Biol.
  contributor:
    fullname: Juge
– volume: 2
  start-page: 55
  year: 2013
  end-page: 70
  ident: bib42
  article-title: Goblet cells and mucins: role in innate defense in enteric infections
  publication-title: Pathogens.
  contributor:
    fullname: Khan
– volume: 23
  start-page: 705
  year: 2018
  end-page: 715
  ident: bib52
  article-title: The impact of dietary fiber on gut microbiota in host health and disease
  publication-title: Cell Host Microbe.
  contributor:
    fullname: Backhed
– volume: 4
  start-page: 447
  year: 2008
  end-page: 457
  ident: bib54
  article-title: Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont
  publication-title: Cell Host Microbe.
  contributor:
    fullname: Gordon
– volume: 114
  start-page: E8155
  year: 2017
  end-page: E8164
  ident: bib10
  article-title: N-glycolyl groups of nonhuman chondroitin sulfates survive in ancient fossils
  publication-title: Proc. Natl. Acad. Sci. USA.
  contributor:
    fullname: Varki
– volume: 7
  start-page: 387
  year: 2017
  ident: bib76
  article-title: Interactions of intestinal bacteria with components of the intestinal mucus
  publication-title: Front. Cell. Infect. Microbiol.
  contributor:
    fullname: Harel
– volume: 10
  start-page: 72
  year: 1993
  end-page: 81
  ident: bib19
  article-title: The roles of enteric bacterial sialidase, sialateO-acetyl esterase and glycosulfatase in the degradation of human colonic mucin
  publication-title: Glycoconjugate J.
  contributor:
    fullname: Clamp
– volume: 59
  start-page: 898
  year: 2010
  end-page: 903
  ident: bib4
  article-title: Purified chicken intestinal mucin attenuates
  publication-title: J. Med. Microbiol.
  contributor:
    fullname: Bourke
– volume: 7
  start-page: 104
  year: 1999
  end-page: 110
  ident: bib65
  article-title: : toxinotype and genotype
  publication-title: Trend. Microbiol
  contributor:
    fullname: Popoff
– volume: 187
  start-page: 1543
  year: 2005
  end-page: 1551
  ident: bib69
  article-title: A novel mechanism for desulfation of mucin: identification and cloning of a mucin-desulfating glycosidase (sulfoglycosidase) from Prevotella strain RS2
  publication-title: J. Bacteriol.
  contributor:
    fullname: Roberton
– volume: 22
  start-page: 688
  year: 1971
  end-page: 692
  ident: bib34
  article-title: Improved medium for enumeration of
  publication-title: Appl. Microbiol.
  contributor:
    fullname: Peeler
– volume: 93
  start-page: 634
  year: 2007
  end-page: 638
  ident: bib84
  article-title: Interaction of
  publication-title: J. Parasitol
  contributor:
    fullname: Mulcahy
– volume: 46
  start-page: 11352
  year: 2007
  end-page: 11360
  ident: bib13
  article-title: Carbohydrate recognition by a large sialidase toxin from
  publication-title: Biochemistry.
  contributor:
    fullname: Healey
– volume: 25
  start-page: 1323
  year: 2015
  end-page: 1324
  ident: bib86
  article-title: Symbol nomenclature for graphical representations of glycans
  publication-title: Glycobiology.
  contributor:
    fullname: Kornfeld
– volume: 1
  start-page: 45
  year: 2010
  end-page: 50
  ident: bib6
  article-title: Bacterial catabolism of nonulosonic (sialic) acid and fitness in the gut
  publication-title: Gut Microbes.
  contributor:
    fullname: Boyd
– volume: 27
  start-page: 1164
  year: 2011
  end-page: 1165
  ident: bib22
  article-title: ProtTest 3: fast selection of best-fit models of protein evolution
  publication-title: Bioinformatics.
  contributor:
    fullname: Posada
– volume: 5
  start-page: 108
  year: 2014
  end-page: 119
  ident: bib64
  article-title: Intestinal microbiome of poultry and its interaction with host and diet
  publication-title: Gut Microbes.
  contributor:
    fullname: Yu
– volume: 18
  start-page: 727
  year: 2008
  end-page: 734
  ident: bib8
  article-title: Characterization of two different endo-alpha-
  publication-title: Glycobiology.
  contributor:
    fullname: Yamamoto
– volume: 283
  start-page: 9080
  year: 2008
  end-page: 9088
  ident: bib59
  article-title: The structure of
  publication-title: J. Biol. Chem.
  contributor:
    fullname: Taylor
– volume: 114
  start-page: E679
  year: 2017
  end-page: E688
  ident: bib62
  article-title: Recognition of protein-linked glycans as a determinant of peptidase activity
  publication-title: Proc. Natl. Acad. Sci. USA.
  contributor:
    fullname: Boraston
– volume: 51
  start-page: 1104
  year: 1986
  end-page: 1109
  ident: bib80
  article-title: Degradation of pig gastric and colonic mucins by bacteria isolated from the pig colon
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Roberton
– volume: 7
  start-page: 1257
  year: 1993
  end-page: 1264
  ident: bib18
  article-title: Trans-sialidase: a unique enzyme activity discovered in the protozoan Trypanosoma cruzi
  publication-title: FASEB J.
  contributor:
    fullname: Colli
– year: 2017
  ident: bib79
  article-title: N-Glycans
  publication-title: Essentials of Glycobiology
  contributor:
    fullname: Aebi
– volume: 13
  start-page: e1006218
  year: 2017
  ident: bib35
  article-title: Immune-driven alterations in mucin sulphation is an important mediator of
  publication-title: PLoS Pathog.
  contributor:
    fullname: Thornton
– volume: 5
  start-page: e9490
  year: 2010
  ident: bib67
  article-title: FastTree 2–approximately maximum-likelihood trees for large alignments
  publication-title: PLoS One.
  contributor:
    fullname: Arkin
– volume: 9
  start-page: 767
  year: 2002
  end-page: 776
  ident: bib57
  article-title: Sulfotransferases and sulfatases in mycobacteria
  publication-title: Chem. Biol.
  contributor:
    fullname: Bertozzi
– volume: 502
  start-page: 96
  year: 2013
  end-page: 99
  ident: bib60
  article-title: Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens
  publication-title: Nature.
  contributor:
    fullname: Sonnenburg
– volume: 13
  start-page: e1006263
  year: 2017
  ident: bib40
  article-title: Deacetylation of sialic acid by esterases potentiates pneumococcal neuraminidase activity for mucin utilization, colonization and virulence
  publication-title: PLoS Pathog.
  contributor:
    fullname: Yesilkaya
– volume: 25
  start-page: 1324
  year: 1972
  end-page: 1328
  ident: bib15
  article-title: Commentary on the Hungate technique for culture of anaerobic bacteria
  publication-title: Am. J. Clin. Nutr.
  contributor:
    fullname: Bryant
– volume: 357
  start-page: 839
  year: 1976
  end-page: 854
  ident: bib58
  article-title: Purification and characterization of
  publication-title: Hoppe Seylers Z Physiol Chem.
  contributor:
    fullname: Mayer
– volume: 2
  start-page: 509
  year: 1992
  end-page: 521
  ident: bib20
  article-title: Bacterial sialidases–roles in pathogenicity and nutrition
  publication-title: Glycobiology.
  contributor:
    fullname: Corfield
– volume: 26
  start-page: 92
  year: 2018
  end-page: 101
  ident: bib83
  article-title: Infection's sweet tooth: how glycans mediate infection and disease susceptibility
  publication-title: Trend. Microbiol
  contributor:
    fullname: Rogers
– volume: 44
  start-page: 166
  year: 2016
  ident: 10.3382/ps/pez297_bib39
  article-title: Sialidases from gut bacteria: a mini-review
  publication-title: Biochem. Soc. Trans.
  doi: 10.1042/BST20150226
  contributor:
    fullname: Juge
– volume: 13
  start-page: e1006263
  year: 2017
  ident: 10.3382/ps/pez297_bib40
  article-title: Deacetylation of sialic acid by esterases potentiates pneumococcal neuraminidase activity for mucin utilization, colonization and virulence
  publication-title: PLoS Pathog.
  doi: 10.1371/journal.ppat.1006263
  contributor:
    fullname: Kahya
– year: 2017
  ident: 10.3382/ps/pez297_bib2
  article-title: A commensal adhesin enhances E. coli retention by mucin, while mucin desulfation by mucin-foraging bacteria enhances its transmigration through the mucus barrier
  publication-title: bioRxiv
  contributor:
    fullname: Al-Saedi
– volume: 76
  start-page: 1117
  year: 2002
  ident: 10.3382/ps/pez297_bib24
  article-title: Selective growth of mucolytic bacteria including Clostridium perfringens in a neonatal piglet model of total parenteral nutrition
  publication-title: Am. J. Clin. Nutr.
  doi: 10.1093/ajcn/76.5.1117
  contributor:
    fullname: Deplancke
– volume: 97
  start-page: 253
  year: 2013
  ident: 10.3382/ps/pez297_bib3
  article-title: A new method for rapid determination of carbohydrate and total carbon concentrations using UV spectrophotometry
  publication-title: Carbohydr. Polym.
  doi: 10.1016/j.carbpol.2013.04.072
  contributor:
    fullname: Albalasmeh
– volume: 14
  start-page: 1174
  year: 2012
  ident: 10.3382/ps/pez297_bib45
  article-title: Host sialoglycans and bacterial sialidases: a mucosal perspective
  publication-title: Cell. Microbiol.
  doi: 10.1111/j.1462-5822.2012.01807.x
  contributor:
    fullname: Lewis
– volume: 25
  start-page: 1324
  year: 1972
  ident: 10.3382/ps/pez297_bib15
  article-title: Commentary on the Hungate technique for culture of anaerobic bacteria
  publication-title: Am. J. Clin. Nutr.
  doi: 10.1093/ajcn/25.12.1324
  contributor:
    fullname: Bryant
– volume: 326
  start-page: 911
  year: 1997
  ident: 10.3382/ps/pez297_bib41
  article-title: Glycosylation differences between pig gastric mucin populations: a comparative study of the neutral oligosaccharides using mass spectrometry
  publication-title: Biochem. J.
  doi: 10.1042/bj3260911
  contributor:
    fullname: Karlsson
– volume: 14
  start-page: 3203
  year: 2005
  ident: 10.3382/ps/pez297_bib74
  article-title: Sulfatases and sulfatase modifying factors: an exclusive and promiscuous relationship
  publication-title: Hum. Mol. Genet.
  doi: 10.1093/hmg/ddi351
  contributor:
    fullname: Sardiello
– volume: 7
  start-page: 104
  year: 1999
  ident: 10.3382/ps/pez297_bib65
  article-title: Clostridium perfringens: toxinotype and genotype
  publication-title: Trend. Microbiol
  doi: 10.1016/S0966-842X(98)01430-9
  contributor:
    fullname: Petit
– volume: 114
  start-page: E679
  year: 2017
  ident: 10.3382/ps/pez297_bib62
  article-title: Recognition of protein-linked glycans as a determinant of peptidase activity
  publication-title: Proc. Natl. Acad. Sci. USA.
  doi: 10.1073/pnas.1615141114
  contributor:
    fullname: Noach
– volume: 59
  start-page: 898
  year: 2010
  ident: 10.3382/ps/pez297_bib4
  article-title: Purified chicken intestinal mucin attenuates Campylobacter jejuni pathogenicity in vitro
  publication-title: J. Med. Microbiol.
  doi: 10.1099/jmm.0.019315-0
  contributor:
    fullname: Alemka
– volume: 55
  start-page: 621
  year: 1991
  ident: 10.3382/ps/pez297_bib72
  article-title: Molecular genetics and pathogenesis of Clostridium perfringens
  publication-title: Microbiol. Rev.
  doi: 10.1128/MR.55.4.621-648.1991
  contributor:
    fullname: Rood
– volume: 82
  start-page: 447
  year: 1992
  ident: 10.3382/ps/pez297_bib85
  article-title: A novel mucin sulphatase from human faeces: its identification, purification and characterization
  publication-title: Clin. Sci.
  doi: 10.1042/cs0820447
  contributor:
    fullname: Tsai
– volume: 281
  start-page: 22464
  year: 2006
  ident: 10.3382/ps/pez297_bib12
  article-title: A new type of bacterial sulfatase reveals a novel maturation pathway in prokaryotes
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M602504200
  contributor:
    fullname: Berteau
– volume: 22
  start-page: 1193
  year: 2012
  ident: 10.3382/ps/pez297_bib73
  article-title: Almost all human gastric mucin O-glycans harbor blood group A, B or H antigens and are potential binding sites for Helicobacter pylori
  publication-title: Glycobiology.
  doi: 10.1093/glycob/cws072
  contributor:
    fullname: Rossez
– volume: 56
  start-page: 347
  year: 2016
  ident: 10.3382/ps/pez297_bib27
  article-title: Cloning, characterization, and production of three alpha-L-fucosidases from Clostridium perfringens ATCC 13124
  publication-title: J. Basic Microbiol
  doi: 10.1002/jobm.201500582
  contributor:
    fullname: Fan
– volume: 73
  start-page: 6063
  year: 2001
  ident: 10.3382/ps/pez297_bib36
  article-title: Microscale nonreductive release of O-linked glycans for subsequent analysis through MALDI mass spectrometry and capillary electrophoresis
  publication-title: Anal. Chem.
  doi: 10.1021/ac015534c
  contributor:
    fullname: Huang
– volume: 9
  start-page: 265
  year: 2011
  ident: 10.3382/ps/pez297_bib55
  article-title: Mucin dynamics and enteric pathogens
  publication-title: Nat. Rev. Microbiol.
  doi: 10.1038/nrmicro2538
  contributor:
    fullname: McGuckin
– volume: 6
  start-page: 8141
  year: 2015
  ident: 10.3382/ps/pez297_bib37
  article-title: Sialic acid catabolism drives intestinal inflammation and microbial dysbiosis in mice
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms9141
  contributor:
    fullname: Huang
– volume: 283
  start-page: 9080
  year: 2008
  ident: 10.3382/ps/pez297_bib59
  article-title: The structure of Clostridium perfringens NanI sialidase and its catalytic intermediates
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M710247200
  contributor:
    fullname: Newstead
– volume: 46
  start-page: 11352
  year: 2007
  ident: 10.3382/ps/pez297_bib13
  article-title: Carbohydrate recognition by a large sialidase toxin from Clostridium perfringens
  publication-title: Biochemistry.
  doi: 10.1021/bi701317g
  contributor:
    fullname: Boraston
– volume: 10
  start-page: 669
  year: 2000
  ident: 10.3382/ps/pez297_bib53
  article-title: Exploring the glycan repertoire of genetically modified mice by isolation and profiling of the major glycan classes and nano-NMR analysis of glycan mixtures
  publication-title: Glycobiology.
  doi: 10.1093/glycob/10.7.669
  contributor:
    fullname: Manzi
– year: 2017
  ident: 10.3382/ps/pez297_bib79
  article-title: N-Glycans
  contributor:
    fullname: Stanley
– volume: 14
  start-page: 1464
  year: 2015
  ident: 10.3382/ps/pez297_bib81
  article-title: Identification of O-glycan structures from chicken intestinal mucins provides insight into Campylobactor jejuni pathogenicity
  publication-title: Mol. Cell. Proteomics.
  doi: 10.1074/mcp.M114.044867
  contributor:
    fullname: Struwe
– volume: 66
  start-page: 8114
  year: 2018
  ident: 10.3382/ps/pez297_bib89
  article-title: Quantitation of sialic acids in infant formulas by liquid chromatography-mass spectrometry: an assessment of different protein sources and discovery of new analogues
  publication-title: J. Agric. Food. Chem.
  doi: 10.1021/acs.jafc.8b01042
  contributor:
    fullname: Wylie
– volume: 32
  start-page: 1792
  year: 2004
  ident: 10.3382/ps/pez297_bib25
  article-title: MUSCLE: multiple sequence alignment with high accuracy and high throughput
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkh340
  contributor:
    fullname: Edgar
– volume: 22
  start-page: 590
  year: 2012
  ident: 10.3382/ps/pez297_bib29
  article-title: Structural analysis of a bacterial exo-alpha-D-N-acetylglucosaminidase in complex with an unusual disaccharide found in class III mucin
  publication-title: Glycobiology.
  doi: 10.1093/glycob/cwr165
  contributor:
    fullname: Ficko-Blean
– volume: 3
  start-page: e3952
  year: 2008
  ident: 10.3382/ps/pez297_bib49
  article-title: Mucin dynamics in intestinal bacterial infection
  publication-title: PLoS One.
  doi: 10.1371/journal.pone.0003952
  contributor:
    fullname: Linden
– volume: 11
  start-page: 27
  year: 2018
  ident: 10.3382/ps/pez297_bib38
  article-title: SACCHARIS: an automated pipeline to streamline discovery of carbohydrate active enzyme activities within polyspecific families and de novo sequence datasets
  publication-title: Biotechnol. Biofuels.
  doi: 10.1186/s13068-018-1027-x
  contributor:
    fullname: Jones
– volume: 114
  start-page: E8155
  year: 2017
  ident: 10.3382/ps/pez297_bib10
  article-title: N-glycolyl groups of nonhuman chondroitin sulfates survive in ancient fossils
  publication-title: Proc. Natl. Acad. Sci. USA.
  doi: 10.1073/pnas.1706306114
  contributor:
    fullname: Bergfeld
– volume: 2
  start-page: 55
  year: 2013
  ident: 10.3382/ps/pez297_bib42
  article-title: Goblet cells and mucins: role in innate defense in enteric infections
  publication-title: Pathogens.
  doi: 10.3390/pathogens2010055
  contributor:
    fullname: Kim
– volume: 165
  start-page: 1332
  year: 2016
  ident: 10.3382/ps/pez297_bib43
  article-title: From dietary fiber to host physiology: short-chain fatty acids as key bacterial metabolites
  publication-title: Cell.
  doi: 10.1016/j.cell.2016.05.041
  contributor:
    fullname: Koh
– volume: 4
  start-page: 447
  year: 2008
  ident: 10.3382/ps/pez297_bib54
  article-title: Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont
  publication-title: Cell Host Microbe.
  doi: 10.1016/j.chom.2008.09.007
  contributor:
    fullname: Martens
– volume: 18
  start-page: 727
  year: 2008
  ident: 10.3382/ps/pez297_bib8
  article-title: Characterization of two different endo-alpha-N-acetylgalactosaminidases from probiotic and pathogenic enterobacteria, Bifidobacterium longum and Clostridium perfringens
  publication-title: Glycobiology.
  doi: 10.1093/glycob/cwn053
  contributor:
    fullname: Ashida
– volume: 51
  start-page: 1104
  year: 1986
  ident: 10.3382/ps/pez297_bib80
  article-title: Degradation of pig gastric and colonic mucins by bacteria isolated from the pig colon
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.51.5.1104-1109.1986
  contributor:
    fullname: Stanley
– volume: 105
  start-page: 12194
  year: 2008
  ident: 10.3382/ps/pez297_bib1
  article-title: Structural basis of Clostridium perfringens toxin complex formation
  publication-title: Proc. Natl. Acad. Sci.
  doi: 10.1073/pnas.0803154105
  contributor:
    fullname: Adams
– volume: 99
  start-page: 996
  year: 2002
  ident: 10.3382/ps/pez297_bib75
  article-title: Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater
  publication-title: Proc. Natl. Acad. Sci.
  doi: 10.1073/pnas.022493799
  contributor:
    fullname: Shimizu
– volume: 25
  start-page: 1323
  year: 2015
  ident: 10.3382/ps/pez297_bib86
  article-title: Symbol nomenclature for graphical representations of glycans
  publication-title: Glycobiology.
  doi: 10.1093/glycob/cwv091
  contributor:
    fullname: Varki
– volume: 66
  start-page: 8574
  year: 2018
  ident: 10.3382/ps/pez297_bib87
  article-title: Capillary electrophoresis analysis of bovine milk oligosaccharides permits an assessment of the influence of diet and the discovery of nine abundant sulfated analogues
  publication-title: J. Agric. Food Chem.
  doi: 10.1021/acs.jafc.8b01041
  contributor:
    fullname: Vicaretti
– volume: 195
  start-page: 1152
  year: 2013
  ident: 10.3382/ps/pez297_bib44
  article-title: Identification of accessory genome regions in poultry Clostridium perfringens isolates carrying the netB plasmid
  publication-title: J. Bacteriol.
  doi: 10.1128/JB.01032-12
  contributor:
    fullname: Lepp
– volume: 8
  start-page: 111
  year: 2017
  ident: 10.3382/ps/pez297_bib68
  article-title: Comparative genomic analysis of the human gut microbiome reveals a broad distribution of metabolic pathways for the degradation of host-synthetized mucin glycans and utilization of mucin-derived monosaccharides
  publication-title: Front. Genet.
  doi: 10.3389/fgene.2017.00111
  contributor:
    fullname: Ravcheev
– start-page: 113
  year: 2015
  ident: 10.3382/ps/pez297_bib14
  article-title: O-GalNAc Glycans
  contributor:
    fullname: Brockhausen
– volume: 77
  start-page: 3807
  year: 2009
  ident: 10.3382/ps/pez297_bib5
  article-title: Sialic acid catabolism confers a competitive advantage to pathogenic Vibrio cholerae in the mouse intestine
  publication-title: Infect. Immun.
  doi: 10.1128/IAI.00279-09
  contributor:
    fullname: Almagro-Moreno
– volume: 28
  start-page: 23
  year: 2014
  ident: 10.3382/ps/pez297_bib26
  article-title: Structural insights into bacterial recognition of intestinal mucins
  publication-title: Curr. Opin. Struct. Biol.
  doi: 10.1016/j.sbi.2014.07.002
  contributor:
    fullname: Etzold
– volume: 42
  start-page: D490
  year: 2014
  ident: 10.3382/ps/pez297_bib51
  article-title: The carbohydrate-active enzymes database (CAZy) in 2013
  publication-title: Nucl. Acids Res.
  doi: 10.1093/nar/gkt1178
  contributor:
    fullname: Lombard
– volume: 10
  start-page: 757
  year: 2002
  ident: 10.3382/ps/pez297_bib16
  article-title: The crystal structure and mode of action of trans-sialidase, a key enzyme in Trypanosoma cruzi pathogenesis
  publication-title: Mol. Cell.
  doi: 10.1016/S1097-2765(02)00680-9
  contributor:
    fullname: Buschiazzo
– volume: 21
  start-page: 141
  year: 1980
  ident: 10.3382/ps/pez297_bib61
  article-title: Clostridium perfringens in animal disease: a review of current knowledge
  publication-title: Can. Vet. J
  contributor:
    fullname: Niilo
– start-page: 119
  year: 2016
  ident: 10.3382/ps/pez297_bib32
  article-title: Role of Clostridium perfringens toxins in necrotic enteritis in poultry
  contributor:
    fullname: Flores-Díaz
– volume: 22
  start-page: 570
  year: 2012
  ident: 10.3382/ps/pez297_bib28
  article-title: Insights into the recognition of the human glycome by microbial carbohydrate-binding modules
  publication-title: Curr. Opin. Struct. Biol.
  doi: 10.1016/j.sbi.2012.07.009
  contributor:
    fullname: Ficko-Blean
– volume: 93
  start-page: 634
  year: 2007
  ident: 10.3382/ps/pez297_bib84
  article-title: Interaction of Eimeria tenella with intestinal mucin in vitro
  publication-title: J. Parasitol
  doi: 10.1645/GE-1066R.1
  contributor:
    fullname: Tierney
– volume: 64
  start-page: 403
  year: 2010
  ident: 10.3382/ps/pez297_bib56
  article-title: Sialidases in vertebrates: a family of enzymes tailored for several cell functions
  publication-title: Adv. Carbohydr. Chem. Biochem.
  doi: 10.1016/S0065-2318(10)64007-3
  contributor:
    fullname: Monti
– volume: 23
  start-page: 705
  year: 2018
  ident: 10.3382/ps/pez297_bib52
  article-title: The impact of dietary fiber on gut microbiota in host health and disease
  publication-title: Cell Host Microbe.
  doi: 10.1016/j.chom.2018.05.012
  contributor:
    fullname: Makki
– volume: 12
  start-page: e0171606
  year: 2017
  ident: 10.3382/ps/pez297_bib33
  article-title: Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens
  publication-title: PLoS One.
  doi: 10.1371/journal.pone.0171606
  contributor:
    fullname: Grondin
– volume: 9
  start-page: 69
  year: 2017
  ident: 10.3382/ps/pez297_bib46
  article-title: Complete genome sequences of Clostridium perfringens Del1 strain isolated from chickens affected by necrotic enteritis
  publication-title: Gut. Pathog.
  doi: 10.1186/s13099-017-0217-6
  contributor:
    fullname: Li
– volume: 5
  start-page: e9490
  year: 2010
  ident: 10.3382/ps/pez297_bib67
  article-title: FastTree 2–approximately maximum-likelihood trees for large alignments
  publication-title: PLoS One.
  doi: 10.1371/journal.pone.0009490
  contributor:
    fullname: Price
– volume: 6
  start-page: 81
  year: 2015
  ident: 10.3382/ps/pez297_bib82
  article-title: Mucin glycan foraging in the human gut microbiome
  publication-title: Front. Genet.
  doi: 10.3389/fgene.2015.00081
  contributor:
    fullname: Tailford
– volume: 5
  start-page: 108
  year: 2014
  ident: 10.3382/ps/pez297_bib64
  article-title: Intestinal microbiome of poultry and its interaction with host and diet
  publication-title: Gut Microbes.
  doi: 10.4161/gmic.26945
  contributor:
    fullname: Pan
– volume: 9
  start-page: 767
  year: 2002
  ident: 10.3382/ps/pez297_bib57
  article-title: Sulfotransferases and sulfatases in mycobacteria
  publication-title: Chem. Biol.
  doi: 10.1016/S1074-5521(02)00175-8
  contributor:
    fullname: Mougous
– volume: 22
  start-page: 688
  year: 1971
  ident: 10.3382/ps/pez297_bib34
  article-title: Improved medium for enumeration of Clostridium perfringens
  publication-title: Appl. Microbiol.
  doi: 10.1128/AM.22.4.688-692.1971
  contributor:
    fullname: Harmon
– volume: 502
  start-page: 96
  year: 2013
  ident: 10.3382/ps/pez297_bib60
  article-title: Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens
  publication-title: Nature.
  doi: 10.1038/nature12503
  contributor:
    fullname: Ng
– volume: 22
  start-page: 738
  year: 1971
  ident: 10.3382/ps/pez297_bib70
  article-title: Chemically defined medium for the growth of Clostridium perfringens
  publication-title: Appl. Microbiol.
  doi: 10.1128/AM.22.4.738-739.1971
  contributor:
    fullname: Riha
– volume: 13
  start-page: 528
  year: 2016
  ident: 10.3382/ps/pez297_bib78
  article-title: Oxidative release of natural glycans for functional glycomics
  publication-title: Nat. Methods.
  doi: 10.1038/nmeth.3861
  contributor:
    fullname: Song
– volume: 11
  start-page: 164
  year: 2006
  ident: 10.3382/ps/pez297_bib9
  article-title: Mucin structure, aggregation, physiological functions and biomedical applications
  publication-title: Curr. Opin. Colloid Interface Sci.
  doi: 10.1016/j.cocis.2005.11.001
  contributor:
    fullname: Bansil
– volume: 27
  start-page: 1164
  year: 2011
  ident: 10.3382/ps/pez297_bib22
  article-title: ProtTest 3: fast selection of best-fit models of protein evolution
  publication-title: Bioinformatics.
  doi: 10.1093/bioinformatics/btr088
  contributor:
    fullname: Darriba
– volume: 3
  start-page: 853
  year: 1995
  ident: 10.3382/ps/pez297_bib23
  article-title: Structures and mechanisms of glycosyl hydrolases
  publication-title: Structure.
  doi: 10.1016/S0969-2126(01)00220-9
  contributor:
    fullname: Davies
– volume: 43
  start-page: 325
  year: 1982
  ident: 10.3382/ps/pez297_bib71
  article-title: In vitro utilization of mucin by Bacteroides fragilis
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.43.2.325-330.1982
  contributor:
    fullname: Roberton
– volume: 7
  start-page: e33524
  year: 2012
  ident: 10.3382/ps/pez297_bib31
  article-title: Carbohydrate recognition by an architecturally complex alpha-N-acetylglucosaminidase from Clostridium perfringens
  publication-title: PLoS One.
  doi: 10.1371/journal.pone.0033524
  contributor:
    fullname: Ficko-Blean
– volume: 134
  start-page: 736
  year: 2004
  ident: 10.3382/ps/pez297_bib77
  article-title: Mucin dynamics in the chick small intestine are altered by starvation
  publication-title: J. Nutr.
  doi: 10.1093/jn/134.4.736
  contributor:
    fullname: Smirnov
– volume: 357
  start-page: 839
  year: 1976
  ident: 10.3382/ps/pez297_bib58
  article-title: Purification and characterization of N-acetylneuraminate lyase from Clostridium perfringens
  publication-title: Hoppe Seylers Z Physiol Chem.
  doi: 10.1515/bchm2.1976.357.1.839
  contributor:
    fullname: Nees
– volume: 7
  start-page: 387
  year: 2017
  ident: 10.3382/ps/pez297_bib76
  article-title: Interactions of intestinal bacteria with components of the intestinal mucus
  publication-title: Front. Cell. Infect. Microbiol.
  doi: 10.3389/fcimb.2017.00387
  contributor:
    fullname: Sicard
– volume: 2
  start-page: 509
  year: 1992
  ident: 10.3382/ps/pez297_bib20
  article-title: Bacterial sialidases–roles in pathogenicity and nutrition
  publication-title: Glycobiology.
  doi: 10.1093/glycob/2.6.509
  contributor:
    fullname: Corfield
– volume: 1
  start-page: 45
  year: 2010
  ident: 10.3382/ps/pez297_bib6
  article-title: Bacterial catabolism of nonulosonic (sialic) acid and fitness in the gut
  publication-title: Gut Microbes.
  doi: 10.4161/gmic.1.1.10386
  contributor:
    fullname: Almagro-Moreno
– volume: 7
  start-page: 1257
  year: 1993
  ident: 10.3382/ps/pez297_bib18
  article-title: Trans-sialidase: a unique enzyme activity discovered in the protozoan Trypanosoma cruzi
  publication-title: FASEB J.
  doi: 10.1096/fasebj.7.13.8405811
  contributor:
    fullname: Colli
– volume: 10
  start-page: 72
  year: 1993
  ident: 10.3382/ps/pez297_bib19
  article-title: The roles of enteric bacterial sialidase, sialateO-acetyl esterase and glycosulfatase in the degradation of human colonic mucin
  publication-title: Glycoconjugate J.
  doi: 10.1007/BF00731190
  contributor:
    fullname: Corfield
– volume: 284
  start-page: 9876
  year: 2009
  ident: 10.3382/ps/pez297_bib30
  article-title: Portrait of an enzyme, a complete structural analysis of a multimodular {beta}-N-acetylglucosaminidase from Clostridium perfringens
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M808954200
  contributor:
    fullname: Ficko-Blean
– volume: 26
  start-page: 92
  year: 2018
  ident: 10.3382/ps/pez297_bib83
  article-title: Infection's sweet tooth: how glycans mediate infection and disease susceptibility
  publication-title: Trend. Microbiol
  doi: 10.1016/j.tim.2017.09.011
  contributor:
    fullname: Taylor
– volume: 7
  start-page: 302
  year: 2016
  ident: 10.3382/ps/pez297_bib21
  article-title: The mucin-degradation strategy of Ruminococcus gnavus: the importance of intramolecular trans-sialidases
  publication-title: Gut Microbes.
  doi: 10.1080/19490976.2016.1186334
  contributor:
    fullname: Crost
– volume: 181
  start-page: 4526
  year: 1999
  ident: 10.3382/ps/pez297_bib88
  article-title: Cloning, sequence, and transcriptional regulation of the operon encoding a putative N-acetylmannosamine-6-phosphate epimerase (nanE) and sialic acid lyase (nanA) in Clostridium perfringens
  publication-title: J. Bacteriol.
  doi: 10.1128/JB.181.15.4526-4532.1999
  contributor:
    fullname: Walters
– volume: 23
  start-page: 1026
  year: 2013
  ident: 10.3382/ps/pez297_bib11
  article-title: Mucin-type O-glycans and their roles in intestinal homeostasis
  publication-title: Glycobiology.
  doi: 10.1093/glycob/cwt045
  contributor:
    fullname: Bergstrom
– volume: 13
  start-page: e1006218
  year: 2017
  ident: 10.3382/ps/pez297_bib35
  article-title: Immune-driven alterations in mucin sulphation is an important mediator of Trichuris muris helminth expulsion
  publication-title: PLoS Pathog.
  doi: 10.1371/journal.ppat.1006218
  contributor:
    fullname: Hasnain
– volume: 8
  start-page: 341
  year: 2016
  ident: 10.3382/ps/pez297_bib48
  article-title: Clostridium perfringens sialidases: potential contributors to intestinal pathogenesis and therapeutic targets
  publication-title: Toxins.
  doi: 10.3390/toxins8110341
  contributor:
    fullname: Li
– volume: 1
  start-page: 183
  year: 2008
  ident: 10.3382/ps/pez297_bib50
  article-title: Mucins in the mucosal barrier to infection
  publication-title: Mucosal. Immunol.
  doi: 10.1038/mi.2008.5
  contributor:
    fullname: Linden
– volume: 187
  start-page: 1543
  year: 2005
  ident: 10.3382/ps/pez297_bib69
  article-title: A novel mechanism for desulfation of mucin: identification and cloning of a mucin-desulfating glycosidase (sulfoglycosidase) from Prevotella strain RS2
  publication-title: J. Bacteriol.
  doi: 10.1128/JB.187.5.1543-1551.2005
  contributor:
    fullname: Rho
– volume: 11
  start-page: e1004787
  year: 2015
  ident: 10.3382/ps/pez297_bib7
  article-title: Intestinal colonization dynamics of Vibrio cholerae
  publication-title: PLoS Pathog.
  doi: 10.1371/journal.ppat.1004787
  contributor:
    fullname: Almagro-Moreno
– volume: 80
  start-page: 1701
  year: 2014
  ident: 10.3382/ps/pez297_bib47
  article-title: The Sialidases of Clostridium perfringens type D strain CN3718 differ in their properties and sensitivities to inhibitors
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.03440-13
  contributor:
    fullname: Li
– volume: 37
  start-page: D233
  year: 2009
  ident: 10.3382/ps/pez297_bib17
  article-title: The Carbohydrate-Active EnZymes database (CAZy): an expert resource for glycogenomics
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkn663
  contributor:
    fullname: Cantarel
– volume: 15
  start-page: 737
  year: 1998
  ident: 10.3382/ps/pez297_bib63
  article-title: A general approach to desalting oligosaccharides released from glycoproteins
  publication-title: Glycoconj. J.
  doi: 10.1023/A:1006983125913
  contributor:
    fullname: Packer
– volume: 96
  start-page: 1387
  year: 2017
  ident: 10.3382/ps/pez297_bib90
  article-title: Microbial community mapping in intestinal tract of broiler chicken
  publication-title: Poult. Sci.
  doi: 10.3382/ps/pew372
  contributor:
    fullname: Xiao
– volume: 45
  start-page: 288
  year: 2016
  ident: 10.3382/ps/pez297_bib66
  article-title: The pathogenesis of necrotic enteritis in chickens: what we know and what we need to know: a review
  publication-title: Avian Pathol
  doi: 10.1080/03079457.2016.1139688
  contributor:
    fullname: Prescott
SSID ssj0021667
Score 2.4260364
Snippet Clostridium perfringens is a Gram-positive opportunistic pathogen that is the principal etiological agent of necrotic enteritis (NE) in poultry. The ability of...
ABSTRACT Clostridium perfringens is a Gram-positive opportunistic pathogen that is the principal etiological agent of necrotic enteritis (NE) in poultry. The...
SourceID proquest
crossref
pubmed
oup
elsevier
SourceType Aggregation Database
Index Database
Publisher
StartPage 5074
SubjectTerms Animals
carbohydrate chromatography
Chickens - microbiology
Clostridium
Clostridium perfringens - physiology
intestinal mucus
Intestine, Small - metabolism
Intestine, Small - microbiology
mass spectrometry
mucin O-glycan
Mucins - chemistry
Polysaccharides - chemistry
Title Structural analysis of broiler chicken small intestinal mucin O-glycan modification by Clostridium perfringens
URI https://dx.doi.org/10.3382/ps/pez297
https://www.ncbi.nlm.nih.gov/pubmed/31180129
https://search.proquest.com/docview/2292997247
Volume 98
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lb9QwELaWcoED4k0pRQZxC6F5OK9jqaiqShQkWrS3yI6dNmiTrHY3ldIzP5yZ2MmmdEGFS7SK4mjj-Tz-ZjwPQt65cRywjHNYSCxB142ysQO8HQummO_k0lGYO_z5JDw6Y8fTYDqZ_BxFLTUr8SG72phX8j9ShXsgV8yS_QfJDi-FG_Ab5AtXkDBcbyXjb13x165wBh8VFxGLGtb6AhO1YY1W1rLE82csDAHrGdln2WRFZX2xz2ctKsGylhgwpKEAdPRgVmM3D1k0JZY1zjvXn_HqGR77FdtRL1rLbKAjvzYmF2qn6jHPZm1lDd7l7wWGma10_AB6otfRxid1W18WXWtZ66OqfvCyGEA7NV1XpgWvL5pi7KZwkyHgbVC9Pli9kW7N1aveJB5DzBkpUqCpbLQpI43cpPDBwMYCsnhmcjhXV56O9b1eVvu37W4IQgTzB4en82Wqh94hd70oCaLe52PMdjcMdeVV8wG6PhUO3Zsv9_TQP7Gaa0mTN2yXjsOcPiQPjPFB9zWSHpGJqh6T-_vnC1OART0h1RpTtMcUrXNqMEUNpmiHKbrGFO0wRXtM0TGmqGjpCFN0hKmn5Ozw0-nBkW16ctiZn_grO3eYiByVRJmQSuaegL1eKBVkTpi5GLgIBBL2rSRzpeeB6REFuZTAAWXoKTfKuf-MbFV1pV4QyiOhwJhQypUBkzEXLMxh9lnIeJIBkd8mb_s5Tee69Ep6Q2bb5H0_26mBvOaCKSBk0-O7IJG_ve5NL6sU9CwenvFK1c0yha_xMMmcwTPPtRCH1_hYRxGI88vb_OMdcm-9Pl6RLZCq2gViuxKvO9z9An7yrjE
link.rule.ids 315,786,790,27957,27958
linkProvider National Library of Medicine
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Structural+analysis+of+broiler+chicken+small+intestinal+mucin+O-glycan+modification+by+Clostridium+perfringens&rft.jtitle=Poultry+science&rft.au=MacMillan%2C+Jaclyn+L&rft.au=Vicaretti%2C+Sara+D&rft.au=Noyovitz%2C+Benjamin&rft.au=Xing%2C+Xiaohui&rft.date=2019-10-01&rft.issn=0032-5791&rft.volume=98&rft.issue=10&rft.spage=5074&rft.epage=5088&rft_id=info:doi/10.3382%2Fps%2Fpez297&rft.externalDBID=n%2Fa&rft.externalDocID=10_3382_ps_pez297
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0032-5791&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0032-5791&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0032-5791&client=summon