Reactome and ORCID-fine-grained credit attribution for community curation

Reactome is a manually curated, open-source, open-data knowledge base of biomolecular pathways. Reactome has always provided clear credit attribution for authors, curators and reviewers through fine-grained annotation of all three roles at the reaction and pathway level. These data are visible in th...

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Published inDatabase : the journal of biological databases and curation Vol. 2019
Main Authors Viteri, Guilherme, Matthews, Lisa, Varusai, Thawfeek, Gillespie, Marc, Milacic, Marija, Cook, Justin, Weiser, Joel, Shorser, Solomon, Sidiropoulos, Konstantinos, Fabregat, Antonio, Haw, Robin, Wu, Guanming, Stein, Lincoln, D'Eustachio, Peter, Hermjakob, Henning
Format Journal Article
LanguageEnglish
Published England Oxford University Press 01.01.2019
Subjects
Data Curation
Opinion
Signal Transduction
User-Computer Interface
Online AccessGet full text

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Abstract Reactome is a manually curated, open-source, open-data knowledge base of biomolecular pathways. Reactome has always provided clear credit attribution for authors, curators and reviewers through fine-grained annotation of all three roles at the reaction and pathway level. These data are visible in the web interface and provided through the various data download formats. To enhance visibility and credit attribution for the work of authors, curators and reviewers, and to provide additional opportunities for Reactome community engagement, we have implemented key changes to Reactome: contributor names are now fully searchable in the web interface, and contributors can 'claim' their contributions to their ORCID profile with a few clicks. In addition, we are reaching out to domain experts to request their help in reviewing and editing Reactome pathways through a new 'Contribution' section, highlighting pathways which are awaiting community review. Database URL: https://reactome.org.
AbstractList Reactome is a manually curated, open-source, open-data knowledge base of biomolecular pathways. Reactome has always provided clear credit attribution for authors, curators and reviewers through fine-grained annotation of all three roles at the reaction and pathway level. These data are visible in the web interface and provided through the various data download formats. To enhance visibility and credit attribution for the work of authors, curators and reviewers, and to provide additional opportunities for Reactome community engagement, we have implemented key changes to Reactome: contributor names are now fully searchable in the web interface, and contributors can ‘claim’ their contributions to their ORCID profile with a few clicks. In addition, we are reaching out to domain experts to request their help in reviewing and editing Reactome pathways through a new ‘Contribution’ section, highlighting pathways which are awaiting community review. Database URL: https://reactome.org
Reactome is a manually curated, open-source, open-data knowledge base of biomolecular pathways. Reactome has always provided clear credit attribution for authors, curators and reviewers through fine-grained annotation of all three roles at the reaction and pathway level. These data are visible in the web interface and provided through the various data download formats. To enhance visibility and credit attribution for the work of authors, curators and reviewers, and to provide additional opportunities for Reactome community engagement, we have implemented key changes to Reactome: contributor names are now fully searchable in the web interface, and contributors can ‘claim’ their contributions to their ORCID profile with a few clicks. In addition, we are reaching out to domain experts to request their help in reviewing and editing Reactome pathways through a new ‘Contribution’ section, highlighting pathways which are awaiting community review. Database URL: https://reactome.org
Reactome is a manually curated, open-source, open-data knowledge base of biomolecular pathways. Reactome has always provided clear credit attribution for authors, curators and reviewers through fine-grained annotation of all three roles at the reaction and pathway level. These data are visible in the web interface and provided through the various data download formats. To enhance visibility and credit attribution for the work of authors, curators and reviewers, and to provide additional opportunities for Reactome community engagement, we have implemented key changes to Reactome: contributor names are now fully searchable in the web interface, and contributors can 'claim' their contributions to their ORCID profile with a few clicks. In addition, we are reaching out to domain experts to request their help in reviewing and editing Reactome pathways through a new 'Contribution' section, highlighting pathways which are awaiting community review. Database URL: https://reactome.org.
Author Milacic, Marija
Wu, Guanming
Fabregat, Antonio
Viteri, Guilherme
Stein, Lincoln
D'Eustachio, Peter
Matthews, Lisa
Weiser, Joel
Varusai, Thawfeek
Cook, Justin
Sidiropoulos, Konstantinos
Hermjakob, Henning
Gillespie, Marc
Shorser, Solomon
Haw, Robin
AuthorAffiliation 1 European Molecular Biology Laboratory , European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK
5 Oregon Health and Science University , Portland, OR 97239, USA
3 Ontario Institute for Cancer Research , Toronto, ON, M5G 0A3, Canada
4 College of Pharmacy and Health Sciences , St. John’s University, Queens, NY 11439, USA
6 State Key Laboratory of Proteomics , Beijing Proteome Research Center, Beijing Institute of Lifeomics, National Center for Protein Sciences (The PHOENIX Center, Beijing), 102206, Beijing, China
2 Department of Biochemistry , NYU School of Medicine, New York, NY 10016, USA
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Opinion
Signal Transduction
User-Computer Interface
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