Genome-wide association studies provide genetic insights into natural variation of seed-size-related traits in mungbean

Although mungbean ( (L.) R. Wilczek) is an important legume crop, its seed yield is relatively low. To address this issue, here 196 accessions with 3,607,508 SNP markers were used to identify quantitative trait nucleotides (QTNs), QTN-by-environment interactions (QEIs), and their candidate genes for...

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Published inFrontiers in plant science Vol. 13; p. 997988
Main Authors Liu, Jinyang, Lin, Yun, Chen, Jingbin, Yan, Qiang, Xue, Chenchen, Wu, Ranran, Chen, Xin, Yuan, Xingxing
Format Journal Article
LanguageEnglish
Published Switzerland Frontiers Media S.A 13.10.2022
Subjects
multi-omics analysis
multiple genome-wide association studies
Plant Science
QTN-by-environment interactions
RT-qPCR
VrEmp24/25
multiple genome-wide association studies
VrEmp24/25
QTN-by-environment interactions
multi-omics analysis
RT-qPCR
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Abstract Although mungbean ( (L.) R. Wilczek) is an important legume crop, its seed yield is relatively low. To address this issue, here 196 accessions with 3,607,508 SNP markers were used to identify quantitative trait nucleotides (QTNs), QTN-by-environment interactions (QEIs), and their candidate genes for seed length (SL), seed width, and 100-seed weight (HSW) in two environments. As a result, 98 QTNs and 20 QEIs were identified using 3VmrMLM, while 95, >10,000, and 15 QTNs were identified using EMMAX, GEMMA, and CMLM, respectively. Among 809 genes around these QTNs, 12 were homologous to known seed-development genes in rice and , in which 10, 2, 1, and 0 genes were found, respectively, by the above four methods to be associated with the three traits, such as for SL and for HSW. Eight of the 12 genes were significantly differentially expressed between two large-seed and two small-seed accessions, and , , , , , , and were further verified by RT-qPCR. Among 65 genes around these QEIs, , , , and were homologous to known seed-development genes in , although new experiments are necessary to explore these novel GEI-trait associations. In addition, 54 genes were identified in comparative genomics analysis to be associated with seed development pathway, in which , , , , and were also identified in genome-wide association studies. This result provided a reliable approach for identifying seed-size-related genes in mungbean and a solid foundation for further molecular biology research on seed-size-related genes.
AbstractList Although mungbean ( Vigna radiata (L.) R. Wilczek) is an important legume crop, its seed yield is relatively low. To address this issue, here 196 accessions with 3,607,508 SNP markers were used to identify quantitative trait nucleotides (QTNs), QTN-by-environment interactions (QEIs), and their candidate genes for seed length (SL), seed width, and 100-seed weight (HSW) in two environments. As a result, 98 QTNs and 20 QEIs were identified using 3VmrMLM, while 95, >10,000, and 15 QTNs were identified using EMMAX, GEMMA, and CMLM, respectively. Among 809 genes around these QTNs, 12 were homologous to known seed-development genes in rice and Arabidopsis thaliana , in which 10, 2, 1, and 0 genes were found, respectively, by the above four methods to be associated with the three traits, such as VrEmp24/25 for SL and VrKIX8 for HSW. Eight of the 12 genes were significantly differentially expressed between two large-seed and two small-seed accessions, and VrKIX8 , VrPAT14 , VrEmp24/25 , VrIAR1 , VrBEE3 , VrSUC4 , and Vrflo2 were further verified by RT-qPCR. Among 65 genes around these QEIs, VrFATB , VrGSO1 , VrLACS2 , and VrPAT14 were homologous to known seed-development genes in A. thaliana , although new experiments are necessary to explore these novel GEI-trait associations. In addition, 54 genes were identified in comparative genomics analysis to be associated with seed development pathway, in which VrKIX8 , VrABA2 , VrABI5 , VrSHB1 , and VrIKU2 were also identified in genome-wide association studies. This result provided a reliable approach for identifying seed-size-related genes in mungbean and a solid foundation for further molecular biology research on seed-size-related genes.
Although mungbean (Vigna radiata (L.) R. Wilczek) is an important legume crop, its seed yield is relatively low. To address this issue, here 196 accessions with 3,607,508 SNP markers were used to identify quantitative trait nucleotides (QTNs), QTN-by-environment interactions (QEIs), and their candidate genes for seed length (SL), seed width, and 100-seed weight (HSW) in two environments. As a result, 98 QTNs and 20 QEIs were identified using 3VmrMLM, while 95, >10,000, and 15 QTNs were identified using EMMAX, GEMMA, and CMLM, respectively. Among 809 genes around these QTNs, 12 were homologous to known seed-development genes in rice and Arabidopsis thaliana, in which 10, 2, 1, and 0 genes were found, respectively, by the above four methods to be associated with the three traits, such as VrEmp24/25 for SL and VrKIX8 for HSW. Eight of the 12 genes were significantly differentially expressed between two large-seed and two small-seed accessions, and VrKIX8, VrPAT14, VrEmp24/25, VrIAR1, VrBEE3, VrSUC4, and Vrflo2 were further verified by RT-qPCR. Among 65 genes around these QEIs, VrFATB, VrGSO1, VrLACS2, and VrPAT14 were homologous to known seed-development genes in A. thaliana, although new experiments are necessary to explore these novel GEI-trait associations. In addition, 54 genes were identified in comparative genomics analysis to be associated with seed development pathway, in which VrKIX8, VrABA2, VrABI5, VrSHB1, and VrIKU2 were also identified in genome-wide association studies. This result provided a reliable approach for identifying seed-size-related genes in mungbean and a solid foundation for further molecular biology research on seed-size-related genes.Although mungbean (Vigna radiata (L.) R. Wilczek) is an important legume crop, its seed yield is relatively low. To address this issue, here 196 accessions with 3,607,508 SNP markers were used to identify quantitative trait nucleotides (QTNs), QTN-by-environment interactions (QEIs), and their candidate genes for seed length (SL), seed width, and 100-seed weight (HSW) in two environments. As a result, 98 QTNs and 20 QEIs were identified using 3VmrMLM, while 95, >10,000, and 15 QTNs were identified using EMMAX, GEMMA, and CMLM, respectively. Among 809 genes around these QTNs, 12 were homologous to known seed-development genes in rice and Arabidopsis thaliana, in which 10, 2, 1, and 0 genes were found, respectively, by the above four methods to be associated with the three traits, such as VrEmp24/25 for SL and VrKIX8 for HSW. Eight of the 12 genes were significantly differentially expressed between two large-seed and two small-seed accessions, and VrKIX8, VrPAT14, VrEmp24/25, VrIAR1, VrBEE3, VrSUC4, and Vrflo2 were further verified by RT-qPCR. Among 65 genes around these QEIs, VrFATB, VrGSO1, VrLACS2, and VrPAT14 were homologous to known seed-development genes in A. thaliana, although new experiments are necessary to explore these novel GEI-trait associations. In addition, 54 genes were identified in comparative genomics analysis to be associated with seed development pathway, in which VrKIX8, VrABA2, VrABI5, VrSHB1, and VrIKU2 were also identified in genome-wide association studies. This result provided a reliable approach for identifying seed-size-related genes in mungbean and a solid foundation for further molecular biology research on seed-size-related genes.
Although mungbean ( (L.) R. Wilczek) is an important legume crop, its seed yield is relatively low. To address this issue, here 196 accessions with 3,607,508 SNP markers were used to identify quantitative trait nucleotides (QTNs), QTN-by-environment interactions (QEIs), and their candidate genes for seed length (SL), seed width, and 100-seed weight (HSW) in two environments. As a result, 98 QTNs and 20 QEIs were identified using 3VmrMLM, while 95, >10,000, and 15 QTNs were identified using EMMAX, GEMMA, and CMLM, respectively. Among 809 genes around these QTNs, 12 were homologous to known seed-development genes in rice and , in which 10, 2, 1, and 0 genes were found, respectively, by the above four methods to be associated with the three traits, such as for SL and for HSW. Eight of the 12 genes were significantly differentially expressed between two large-seed and two small-seed accessions, and , , , , , , and were further verified by RT-qPCR. Among 65 genes around these QEIs, , , , and were homologous to known seed-development genes in , although new experiments are necessary to explore these novel GEI-trait associations. In addition, 54 genes were identified in comparative genomics analysis to be associated with seed development pathway, in which , , , , and were also identified in genome-wide association studies. This result provided a reliable approach for identifying seed-size-related genes in mungbean and a solid foundation for further molecular biology research on seed-size-related genes.
Although mungbean (Vigna radiata (L.) R. Wilczek) is an important legume crop, its seed yield is relatively low. To address this issue, here 196 accessions with 3,607,508 SNP markers were used to identify quantitative trait nucleotides (QTNs), QTN-by-environment interactions (QEIs), and their candidate genes for seed length (SL), seed width, and 100-seed weight (HSW) in two environments. As a result, 98 QTNs and 20 QEIs were identified using 3VmrMLM, while 95, >10,000, and 15 QTNs were identified using EMMAX, GEMMA, and CMLM, respectively. Among 809 genes around these QTNs, 12 were homologous to known seed-development genes in rice and Arabidopsis thaliana, in which 10, 2, 1, and 0 genes were found, respectively, by the above four methods to be associated with the three traits, such as VrEmp24/25 for SL and VrKIX8 for HSW. Eight of the 12 genes were significantly differentially expressed between two large-seed and two small-seed accessions, and VrKIX8, VrPAT14, VrEmp24/25, VrIAR1, VrBEE3, VrSUC4, and Vrflo2 were further verified by RT-qPCR. Among 65 genes around these QEIs, VrFATB, VrGSO1, VrLACS2, and VrPAT14 were homologous to known seed-development genes in A. thaliana, although new experiments are necessary to explore these novel GEI-trait associations. In addition, 54 genes were identified in comparative genomics analysis to be associated with seed development pathway, in which VrKIX8, VrABA2, VrABI5, VrSHB1, and VrIKU2 were also identified in genome-wide association studies. This result provided a reliable approach for identifying seed-size-related genes in mungbean and a solid foundation for further molecular biology research on seed-size-related genes.
Author Liu, Jinyang
Chen, Xin
Yan, Qiang
Lin, Yun
Xue, Chenchen
Yuan, Xingxing
Chen, Jingbin
Wu, Ranran
AuthorAffiliation Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences/Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement , Nanjing , China
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Cites_doi 10.1093/bioinformatics/btu170
10.1093/bioinformatics/btr330
10.3389/fpls.2018.01311
10.1007/s00497-015-0255-5
10.1016/j.molp.2021.04.011
10.1111/pbi.12391
10.1534/g3.112.004655
10.22541/au.160587196.63922177/v1
10.1021/jf051201v
10.1111/j.1469-8137.2012.04083.x
10.1105/tpc.113.115063
10.1038/ng.546
10.1038/ng2014
10.1105/tpc.017608
10.1111/tpj.14788
10.1093/nar/gkn760
10.1016/0378-1097(90)90075-2
10.1038/s41477-020-0749-5
10.1093/bioinformatics/bth457
10.1016/j.csbj.2022.06.014
10.1038/nmeth.1226
10.1038/srep20309
10.1093/bioinformatics/btq272
10.1094/MPMI-09-10-0201
10.1093/hr/uhab074
10.3329/agric.v12i2.21730
10.1105/tpc.105.037259
10.1101/gr.107524.110
10.3389/fpls.2018.00182
10.1186/s12284-016-0136-z
10.1111/tpj.14329
10.1111/nph.18153
10.1093/bioinformatics/btp324
10.1146/annurev.arplant.55.031903.141801
10.1038/ng.548
10.1111/pbi.13865
10.1093/pcp/pcz083
10.1105/tpc.109.070821
10.3389/fpls.2020.01150
10.1093/jxb/erab241
10.1016/j.molp.2022.06.002
10.1105/tpc.008946
10.3389/fpls.2019.00100
10.1105/tpc.111.095109
10.1139/G09-031
10.1111/tpj.13181
10.1038/ncomms6443
10.1016/j.molp.2017.09.009
10.1105/tpc.010315
10.1146/annurev-arplant-050718-095851
10.1126/science.1059040
10.1111/nph.13632
10.1111/tpj.15506
10.1111/tpj.13542
10.1093/jxb/eraa426
10.18637/jss.v016.c03
10.1111/tpj.14133
10.1093/plphys/kiab394
10.1007/s00122-021-03774-6
10.1038/ng.2310
10.1105/tpc.113.121566
10.1002/tpg2.20121
10.3389/fpls.2020.608550
10.1105/tpc.113.113589
10.1016/j.gene.2022.146658
10.1038/nprot.2016.095
10.1111/pbi.12168
10.1073/pnas.1611763113
10.1007/s10681-006-9299-9
10.1038/s41467-018-03141-y
10.1101/gad.463608
10.1111/j.1365-313X.2011.04638.x
10.1111/j.1439-0523.2005.01084.x
10.1371/journal.pgen.1007847
10.1111/nph.16928
10.1038/s41467-020-15603-3
10.1111/nph.17813
10.1093/plphys/kiac096
10.1016/j.molp.2022.02.012
10.3389/fpls.2017.01604
10.1093/nar/gkw1141
10.1104/pp.102.018762
10.1104/pp.19.00338
10.1016/j.plantsci.2018.03.024
10.1128/mSphere.00401-17
10.1155/2014/437283
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Keywords multiple genome-wide association studies
VrEmp24/25
QTN-by-environment interactions
multi-omics analysis
RT-qPCR
Language English
License Copyright © 2022 Liu, Lin, Chen, Yan, Xue, Wu, Chen and Yuan.
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Reviewed by: Jia Wen, The University of North Carolina at Chapel Hill, United States; Youlu Yuan, Cotton Research Institute (CAAS), China
This article was submitted to Technical Advances in Plant Science, a section of the journal Frontiers in Plant Science
Edited by: Zhenyu Jia, University of California, Riverside, United States
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References Lease (B31) 2001; 13
Lynch (B50) 2022; 189
Pongpanich (B60) 2010; 26
Nguyen (B56) 2021; 229
Kang (B29) 2010; 42
Smalle (B67) 2004; 55
Ullah (B73) 2001; 292
Guo (B21) 2020; 11
Sun (B72) 2018; 9
Danecek (B12) 2011; 27
Chauffour (B8) 2019; 180
Mei (B53) 2009; 52
Xia (B75) 2013; 25
Ligas (B40) 2019; 97
Luo (B49) 2013; 25
Cheng (B10) 2014; 26
Hao (B23) 2021; 14
Li (B34); 15
Chakravorty (B7) 2011; 67
Ha (B22) 2021; 14
Xu (B78) 2021; 72
Fernandez (B17) 1988
Orozco-Arroyo (B57) 2015; 28
Huang (B25) 2006; 18
Garcia (B18) 2003; 131
Jensen (B28) 2009; 37
McKenna (B52) 2010; 20
Zhang (B82) 2017; 91
Li (B33) 2009; 25
Liu (B45); 11
Liu (B44); 836
Alfson (B2) 2018; 3
Li (B35); 15
Somta (B69) 2007; 155
Wu (B74) 2016; 14
Evfratov (B15) 2017; 45
Yan (B80) 2020
Liu (B46); 71
Zhang (B86) 2010; 42
Li (B37) 2012; 194
Zhang (B85) 2019; 10
Liu (B42)
Gong (B20) 2022; 9
Bai (B3) 2022; 233
East (B14) 1990; 57
Moreno (B54) 2018; 271
Creff (B11) 2019; 15
Bonaventure (B6) 2003; 15
Barrett (B4) 2005; 21
Lu (B48) 2016; 86
Plackett (B59) 2012; 24
Bolger (B5) 2014; 30
Zhao (B88) 2016; 6
Xiao (B76) 2016; 209
Zhou (B89) 2012; 44
Humphry (B26) 2010; 124
Song (B70) 2007; 39
Pertea (B58) 2016; 11
Liaw (B39) 2002; 2
She (B64) 2010; 22
Shin (B65) 2006; 16
Cheng (B9) 2018; 9
Duan (B13) 2022; 20
Lee (B32) 2021; 108
Li (B38) 2008; 22
Smith (B68) 2005; 53
Xiu (B77) 2020; 11
Schnurr (B63) 2004; 16
Singh (B66) 2011; 24
Ren (B62) 2019; 60
Ge (B19) 2016; 113
Li (B36) 2019; 70
Zuo (B90) 2022; 20
Hu (B24) 2022; 235
Fang (B16) 2016; 9
Islam (B27) 2015; 12
Rampey (B61) 2013; 3
Zhang (B87) 2019; 99
Liu (B43); 12
Sun (B71) 2014; 12
Zhang (B81) 2020; 6
Zhang (B83) 2021; 134
Xu (B79) 2018; 9
Manan (B51) 2017; 8
Liu (B47); 103
Kang (B30) 2014; 5
Alam (B1) 2014; 2014
Mortazavi (B55) 2008; 5
Zhang (B84) 2017; 10
Liu (B41) 2021; 187
References_xml – volume: 30
  start-page: 2114
  year: 2014
  ident: B5
  article-title: Trimmomatic: A flexible trimmer for illumina sequence data.
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btu170
  contributor:
    fullname: Bolger
– volume: 27
  start-page: 2156
  year: 2011
  ident: B12
  article-title: The variant call format and VCFtools.
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btr330
  contributor:
    fullname: Danecek
– volume: 9
  year: 2018
  ident: B79
  article-title: Genome-wide association mapping of starch pasting properties in maize using single-locus and multi-locus models.
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2018.01311
  contributor:
    fullname: Xu
– volume: 28
  start-page: 17
  year: 2015
  ident: B57
  article-title: Networks controlling seed size in Arabidopsis.
  publication-title: Plant Reprod.
  doi: 10.1007/s00497-015-0255-5
  contributor:
    fullname: Orozco-Arroyo
– volume: 14
  start-page: 1266
  year: 2021
  ident: B23
  article-title: The GW2-WG1-OsbZIP47 pathway controls grain size and weight in rice.
  publication-title: Mol. Plant
  doi: 10.1016/j.molp.2021.04.011
  contributor:
    fullname: Hao
– volume: 14
  start-page: 377
  year: 2016
  ident: B74
  article-title: CLUSTERED PRIMARY BRANCH 1, a new allele of DWARF11, controls panicle architecture and seed size in rice.
  publication-title: Plant Biotechnol. J.
  doi: 10.1111/pbi.12391
  contributor:
    fullname: Wu
– volume: 3
  start-page: 131
  year: 2013
  ident: B61
  article-title: Compensatory mutations in predicted metal transporters modulate auxin conjugate responsiveness in Arabidopsis.
  publication-title: G3
  doi: 10.1534/g3.112.004655
  contributor:
    fullname: Rampey
– year: 1988
  ident: B17
  publication-title: The AVRDC mungbean improvement program: The past, present and future.
  contributor:
    fullname: Fernandez
– year: 2020
  ident: B80
  publication-title: High-quality genome assembly, annotation and evolutionary analysis of the mungbean (Vigna radiata) genome.
  doi: 10.22541/au.160587196.63922177/v1
  contributor:
    fullname: Yan
– volume: 53
  start-page: 9848
  year: 2005
  ident: B68
  article-title: Comparison of several methods for the extraction of DNA from potatoes and potato-derived products.
  publication-title: J. Agric. Food Chem.
  doi: 10.1021/jf051201v
  contributor:
    fullname: Smith
– volume: 194
  start-page: 690
  year: 2012
  ident: B37
  article-title: The plant-specific G protein γ subunit AGG3 influences organ size and shape in Arabidopsis thaliana.
  publication-title: New Phytol.
  doi: 10.1111/j.1469-8137.2012.04083.x
  contributor:
    fullname: Li
– volume: 25
  start-page: 3347
  year: 2013
  ident: B75
  article-title: The ubiquitin receptor DA1 interacts with the E3 ubiquitin ligase DA2 to regulate seed and organ size in Arabidopsis.
  publication-title: Plant Cell
  doi: 10.1105/tpc.113.115063
  contributor:
    fullname: Xia
– volume: 42
  start-page: 355
  year: 2010
  ident: B86
  article-title: Mixed linear model approach adapted for genome-wide association studies.
  publication-title: Nat. Genet.
  doi: 10.1038/ng.546
  contributor:
    fullname: Zhang
– volume: 39
  start-page: 623
  year: 2007
  ident: B70
  article-title: A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase.
  publication-title: Nat. Genet.
  doi: 10.1038/ng2014
  contributor:
    fullname: Song
– volume: 16
  start-page: 629
  year: 2004
  ident: B63
  article-title: The acyl-CoA synthetase encoded by LACS2 is essential for normal cuticle development in Arabidopsis.
  publication-title: Plant Cell
  doi: 10.1105/tpc.017608
  contributor:
    fullname: Schnurr
– volume: 103
  start-page: 1103
  ident: B47
  article-title: Three-dimensional genetic networks among seed oil-related traits, metabolites and genes reveal the genetic foundations of oil synthesis in soybean.
  publication-title: Plant J.
  doi: 10.1111/tpj.14788
  contributor:
    fullname: Liu
– volume: 37
  start-page: D412
  year: 2009
  ident: B28
  article-title: STRING 8–a global view on proteins and their functional interactions in 630 organisms.
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkn760
  contributor:
    fullname: Jensen
– volume: 57
  start-page: 249
  year: 1990
  ident: B14
  article-title: Change of a single amino acid in the leader peptide of a staphylococcal beta-lactamase prevents the appearance of the enzyme in the medium.
  publication-title: FEMS Microbiol. Lett.
  doi: 10.1016/0378-1097(90)90075-2
  contributor:
    fullname: East
– volume: 6
  start-page: 1146
  year: 2020
  ident: B81
  article-title: Mobile terminal flower1 determines seed size in Arabidopsis.
  publication-title: Nat. Plants
  doi: 10.1038/s41477-020-0749-5
  contributor:
    fullname: Zhang
– volume: 21
  start-page: 263
  year: 2005
  ident: B4
  article-title: Haploview: Analysis and visualization of LD and haplotype maps.
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bth457
  contributor:
    fullname: Barrett
– volume: 20
  start-page: 2951
  year: 2022
  ident: B90
  article-title: Domestication and improvement genes reveal the differences of seed size- and oil-related traits in soybean domestication and improvement.
  publication-title: Comput. Struct. Biotechnol. J.
  doi: 10.1016/j.csbj.2022.06.014
  contributor:
    fullname: Zuo
– volume: 5
  start-page: 621
  year: 2008
  ident: B55
  article-title: Mapping and quantifying mammalian transcriptomes by RNA-Seq.
  publication-title: Nat. Methods
  doi: 10.1038/nmeth.1226
  contributor:
    fullname: Mortazavi
– volume: 6
  year: 2016
  ident: B88
  article-title: Precocious leaf senescence by functional loss of PROTEIN S-ACYL TRANSFERASE14 involves the NPR1-dependent salicylic acid signaling.
  publication-title: Sci. Rep.
  doi: 10.1038/srep20309
  contributor:
    fullname: Zhao
– volume: 26
  start-page: 1731
  year: 2010
  ident: B60
  article-title: A quality control algorithm for filtering SNPs in genome-wide association studies.
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btq272
  contributor:
    fullname: Pongpanich
– volume: 24
  start-page: 506
  year: 2011
  ident: B66
  article-title: Silencing genes encoding omega-3 fatty acid desaturase alters seed size and accumulation of bean pod mottle virus in soybean.
  publication-title: Mol. Plant Microbe Interact.
  doi: 10.1094/MPMI-09-10-0201
  contributor:
    fullname: Singh
– volume: 9
  year: 2022
  ident: B20
  article-title: Genome-wide association analysis provides molecular insights into the natural variation of watermelon seed size.
  publication-title: Hortic. Res.
  doi: 10.1093/hr/uhab074
  contributor:
    fullname: Gong
– volume: 12
  start-page: 39
  year: 2015
  ident: B27
  article-title: Impacts of famers’ participation in upscaling technologies on mungbean (Vigna radiata l.) production in the south-western region of Bangladesh.
  publication-title: Agriculturists
  doi: 10.3329/agric.v12i2.21730
  contributor:
    fullname: Islam
– volume: 18
  start-page: 1226
  year: 2006
  ident: B25
  article-title: The plastid protein THYLAKOID FORMATION1 and the plasma membrane G-protein GPA1 interact in a novel sugar-signaling mechanism in Arabidopsis.
  publication-title: Plant Cell
  doi: 10.1105/tpc.105.037259
  contributor:
    fullname: Huang
– volume: 20
  start-page: 1297
  year: 2010
  ident: B52
  article-title: The genome analysis toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data.
  publication-title: Genome Res.
  doi: 10.1101/gr.107524.110
  contributor:
    fullname: McKenna
– volume: 9
  year: 2018
  ident: B9
  article-title: The ERA-related GTPase AtERG2 associated with mitochondria 18S RNA is essential for early embryo development in Arabidopsis.
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2018.00182
  contributor:
    fullname: Cheng
– volume: 9
  year: 2016
  ident: B16
  article-title: SMALL GRAIN 11 controls grain size, grain number and grain yield in rice.
  publication-title: Rice
  doi: 10.1186/s12284-016-0136-z
  contributor:
    fullname: Fang
– volume: 2
  start-page: 18
  year: 2002
  ident: B39
  article-title: Classification and regression by randomforest.
  publication-title: R News
  contributor:
    fullname: Liaw
– volume: 99
  start-page: 344
  year: 2019
  ident: B87
  article-title: The 14-3-3 protein GF14f negatively affects grain filling of inferior spikelets of rice (Oryza sativa L.).
  publication-title: Plant J.
  doi: 10.1111/tpj.14329
  contributor:
    fullname: Zhang
– volume: 235
  start-page: 502
  year: 2022
  ident: B24
  article-title: Downregulation of a gibberellin 3β-hydroxylase enhances photosynthesis and increases seed yield in soybean.
  publication-title: New Phytol.
  doi: 10.1111/nph.18153
  contributor:
    fullname: Hu
– volume: 25
  start-page: 1754
  year: 2009
  ident: B33
  article-title: Fast and accurate short read alignment with Burrows-Wheeler transform.
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp324
  contributor:
    fullname: Li
– volume: 55
  start-page: 555
  year: 2004
  ident: B67
  article-title: The ubiquitin 26S proteasome proteolytic pathway.
  publication-title: Annu. Rev. Plant Biol.
  doi: 10.1146/annurev.arplant.55.031903.141801
  contributor:
    fullname: Smalle
– volume: 42
  start-page: 348
  year: 2010
  ident: B29
  article-title: Variance component model to account for sample structure in genome-wide association studies.
  publication-title: Nat. Genet.
  doi: 10.1038/ng.548
  contributor:
    fullname: Kang
– volume: 20
  start-page: 1807
  year: 2022
  ident: B13
  article-title: Natural allelic variation of GmST05 controlling seed size and quality in soybean.
  publication-title: Plant Biotechnol. J.
  doi: 10.1111/pbi.13865
  contributor:
    fullname: Duan
– volume: 60
  start-page: 1734
  year: 2019
  ident: B62
  article-title: Maize empty pericarp602 encodes a P-type PPR protein that is essential for seed development.
  publication-title: Plant Cell Physiol.
  doi: 10.1093/pcp/pcz083
  contributor:
    fullname: Ren
– volume: 22
  start-page: 3280
  year: 2010
  ident: B64
  article-title: A novel factor floury endosperm2 is involved in regulation of rice grain size and starch quality.
  publication-title: Plant Cell
  doi: 10.1105/tpc.109.070821
  contributor:
    fullname: She
– volume: 11
  year: 2020
  ident: B21
  article-title: Rice OsLHT1 functions in leaf-to-panicle nitrogen allocation for grain yield and quality.
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2020.01150
  contributor:
    fullname: Guo
– volume: 72
  start-page: 5275
  year: 2021
  ident: B78
  article-title: Sugar export from Arabidopsis leaves: Actors and regulatory strategies.
  publication-title: J. Exp. Bot.
  doi: 10.1093/jxb/erab241
  contributor:
    fullname: Xu
– volume: 15
  start-page: 1251
  ident: B34
  article-title: IIIVmrMLM: The R and C++ tools associated with 3VmrMLM, a comprehensive GWAS method for dissecting quantitative traits.
  publication-title: Mol. Plant
  doi: 10.1016/j.molp.2022.06.002
  contributor:
    fullname: Li
– volume: 15
  start-page: 1020
  year: 2003
  ident: B6
  article-title: Disruption of the FATB gene in Arabidopsis demonstrates an essential role of saturated fatty acids in plant growth.
  publication-title: Plant Cell
  doi: 10.1105/tpc.008946
  contributor:
    fullname: Bonaventure
– volume: 10
  year: 2019
  ident: B85
  article-title: Editorial: The applications of new multi-locus GWAS methodologies in the genetic dissection of complex traits.
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2019.00100
  contributor:
    fullname: Zhang
– volume: 24
  start-page: 941
  year: 2012
  ident: B59
  article-title: Analysis of the developmental roles of the Arabidopsis gibberellin 20-oxidases demonstrates that GA20ox1, -2, and -3 are the dominant paralogs.
  publication-title: Plant Cell
  doi: 10.1105/tpc.111.095109
  contributor:
    fullname: Plackett
– volume: 52
  start-page: 589
  year: 2009
  ident: B53
  article-title: Relationship between bruchid resistance and seed mass in mungbean based on QTL analysis.
  publication-title: Genome
  doi: 10.1139/G09-031
  contributor:
    fullname: Mei
– volume: 86
  start-page: 530
  year: 2016
  ident: B48
  article-title: The transcriptomic signature of developing soybean seeds reveals the genetic basis of seed trait adaptation during domestication.
  publication-title: Plant J.
  doi: 10.1111/tpj.13181
  contributor:
    fullname: Lu
– volume: 5
  year: 2014
  ident: B30
  article-title: Genome sequence of mungbean and insights into evolution within Vigna species.
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms6443
  contributor:
    fullname: Kang
– volume: 10
  start-page: 1321
  year: 2017
  ident: B84
  article-title: The mitochondrion-targeted PENTATRICOPEPTIDE REPEAT78 protein is required for nad5 mature mRNA stability and seed development in maize.
  publication-title: Mol. Plant
  doi: 10.1016/j.molp.2017.09.009
  contributor:
    fullname: Zhang
– volume: 13
  start-page: 2631
  year: 2001
  ident: B31
  article-title: A mutant Arabidopsis heterotrimeric G-protein beta subunit affects leaf, flower, and fruit development.
  publication-title: Plant Cell
  doi: 10.1105/tpc.010315
  contributor:
    fullname: Lease
– volume: 70
  start-page: 435
  year: 2019
  ident: B36
  article-title: Molecular networks of seed size control in plants.
  publication-title: Annu. Rev. Plant Biol.
  doi: 10.1146/annurev-arplant-050718-095851
  contributor:
    fullname: Li
– volume: 12
  ident: B43
  article-title: Identification and clarification of VrCYCA1: A key genic male sterility-related gene in mungbean by multi-omics analysis.
  publication-title: Agriculture
  contributor:
    fullname: Liu
– volume: 292
  start-page: 2066
  year: 2001
  ident: B73
  article-title: Modulation of cell proliferation by heterotrimeric G protein in Arabidopsis.
  publication-title: Science
  doi: 10.1126/science.1059040
  contributor:
    fullname: Ullah
– volume: 209
  start-page: 636
  year: 2016
  ident: B76
  article-title: SHORT HYPOCOTYL UNDER BLUE1 or HAIKU2 mixepression alters canola and Arabidopsis seed development.
  publication-title: New Phytol.
  doi: 10.1111/nph.13632
  contributor:
    fullname: Xiao
– ident: B42
  publication-title: High-quality genome assembly and genome-wide association studies provide genetic insights into natural variation in yield-related traits in mungbean.
  contributor:
    fullname: Liu
– volume: 108
  start-page: 1162
  year: 2021
  ident: B32
  article-title: Redundant roles of four ZIP family members in zinc homeostasis and seed development in Arabidopsis thaliana.
  publication-title: Plant J.
  doi: 10.1111/tpj.15506
  contributor:
    fullname: Lee
– volume: 91
  start-page: 158
  year: 2017
  ident: B82
  article-title: Global analysis of canola genes targeted by SHORT HYPOCOTYL UNDER BLUE 1 during endosperm and embryo development.
  publication-title: Plant J.
  doi: 10.1111/tpj.13542
  contributor:
    fullname: Zhang
– volume: 71
  start-page: 6988
  ident: B46
  article-title: An evolutionary population structure model reveals pleiotropic effects of GmPDAT for traits related to seed size and oil content in soybean.
  publication-title: J. Exp. Bot.
  doi: 10.1093/jxb/eraa426
  contributor:
    fullname: Liu
– volume: 16
  start-page: 1
  year: 2006
  ident: B65
  article-title: LDheatmap: An R function for graphical display of pairwise linkage disequilibria between single nucleotide polymorphisms.
  publication-title: J. Stat. Softw.
  doi: 10.18637/jss.v016.c03
  contributor:
    fullname: Shin
– volume: 97
  start-page: 447
  year: 2019
  ident: B40
  article-title: The assembly pathway of complex I in Arabidopsis thaliana.
  publication-title: Plant J.
  doi: 10.1111/tpj.14133
  contributor:
    fullname: Ligas
– volume: 187
  start-page: 2563
  year: 2021
  ident: B41
  article-title: Diversification of plant agronomic traits by genome editing of brassinosteroid signaling family genes in rice
  publication-title: Plant Physiol
  doi: 10.1093/plphys/kiab394
  contributor:
    fullname: Liu
– volume: 134
  start-page: 1329
  year: 2021
  ident: B83
  article-title: Comparative selective signature analysis and high-resolution GWAS reveal a new candidate gene controlling seed weight in soybean.
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-021-03774-6
  contributor:
    fullname: Zhang
– volume: 44
  start-page: 821
  year: 2012
  ident: B89
  article-title: Genome-wide efficient mixed-model analysis for association studies.
  publication-title: Nat. Genet.
  doi: 10.1038/ng.2310
  contributor:
    fullname: Zhou
– volume: 26
  start-page: 1053
  year: 2014
  ident: B10
  article-title: Abscisic acid regulates early seed development in Arabidopsis by ABI5-mediated transcription of SHORT HYPOCOTYL UNDER BLUE1.
  publication-title: Plant Cell
  doi: 10.1105/tpc.113.121566
  contributor:
    fullname: Cheng
– volume: 14
  year: 2021
  ident: B22
  article-title: A near-complete genome sequence of mungbean (Vigna radiata L.) provides key insights into the modern breeding program
  publication-title: Plant Genome
  doi: 10.1002/tpg2.20121
  contributor:
    fullname: Ha
– volume: 11
  year: 2020
  ident: B77
  article-title: Empty Pericarp24 and empty Pericarp25 are required for the splicing of mitochondrial introns, complex I assembly, and seed development in maize.
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2020.608550
  contributor:
    fullname: Xiu
– volume: 25
  start-page: 3360
  year: 2013
  ident: B49
  article-title: An-1 encodes a basic helix-loop-helix protein that regulates awn development, grain size, and grain number in rice.
  publication-title: Plant Cell
  doi: 10.1105/tpc.113.113589
  contributor:
    fullname: Luo
– volume: 836
  ident: B44
  article-title: Genetic analysis and identification of VrFRO8, a salt tolerance-related gene in mungbean.
  publication-title: Gene
  doi: 10.1016/j.gene.2022.146658
  contributor:
    fullname: Liu
– volume: 11
  start-page: 1650
  year: 2016
  ident: B58
  article-title: Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown.
  publication-title: Nat. Protoc.
  doi: 10.1038/nprot.2016.095
  contributor:
    fullname: Pertea
– volume: 12
  start-page: 624
  year: 2014
  ident: B71
  article-title: Simultaneous over-expressing of an acyl-ACP thioesterase (FatB) and silencing of acyl-acyl carrier protein desaturase by artificial microRNAs increases saturated fatty acid levels in Brassica napus seeds.
  publication-title: Plant Biotechnol. J.
  doi: 10.1111/pbi.12168
  contributor:
    fullname: Sun
– volume: 113
  start-page: 12414
  year: 2016
  ident: B19
  article-title: Increasing seed size and quality by manipulating BIG SEEDS1 in legume species.
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.1611763113
  contributor:
    fullname: Ge
– volume: 155
  start-page: 47
  year: 2007
  ident: B69
  article-title: Inheritance of seed resistance to bruchids in cultivated mungbean (Vigna radiata, L. Wilczek)
  publication-title: Euphytica
  doi: 10.1007/s10681-006-9299-9
  contributor:
    fullname: Somta
– volume: 9
  year: 2018
  ident: B72
  article-title: A G-protein pathway determines grain size in rice.
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-018-03141-y
  contributor:
    fullname: Sun
– volume: 22
  start-page: 1331
  year: 2008
  ident: B38
  article-title: Control of final seed and organ size by the DA1 gene family in Arabidopsis thaliana.
  publication-title: Genes Dev.
  doi: 10.1101/gad.463608
  contributor:
    fullname: Li
– volume: 67
  start-page: 840
  year: 2011
  ident: B7
  article-title: An atypical heterotrimeric G-protein γ-subunit is involved in guard cell K+-channel regulation and morphological development in Arabidopsis thaliana.
  publication-title: Plant J.
  doi: 10.1111/j.1365-313X.2011.04638.x
  contributor:
    fullname: Chakravorty
– volume: 124
  start-page: 292
  year: 2010
  ident: B26
  article-title: Relationships between hard-seededness and seed weight in mungbean (Vigna radiata) assessed by QTL analysis.
  publication-title: Plant Breed.
  doi: 10.1111/j.1439-0523.2005.01084.x
  contributor:
    fullname: Humphry
– volume: 15
  year: 2019
  ident: B11
  article-title: A stress-response-related inter-compartmental signalling pathway regulates embryonic cuticle integrity in Arabidopsis.
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1007847
  contributor:
    fullname: Creff
– volume: 229
  start-page: 920
  year: 2021
  ident: B56
  article-title: GmKIX8-1 regulates organ size in soybean and is the causative gene for the major seed weight QTL qSw17-1.
  publication-title: New Phytol.
  doi: 10.1111/nph.16928
  contributor:
    fullname: Nguyen
– volume: 11
  ident: B45
  article-title: Transcriptional repression of GIF1 by the KIX-PPD-MYC repressor complex controls seed size in Arabidopsis.
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-020-15603-3
  contributor:
    fullname: Liu
– volume: 233
  start-page: 823
  year: 2022
  ident: B3
  article-title: Long-chain acyl-CoA synthetases activate fatty acids for lipid synthesis, remodeling and energy production in Chlamydomonas.
  publication-title: New Phytol.
  doi: 10.1111/nph.17813
  contributor:
    fullname: Bai
– volume: 189
  start-page: 666
  year: 2022
  ident: B50
  article-title: ABI5 binding protein2 inhibits ABA responses during germination without ABA-INSENSITIVE5 degradation.
  publication-title: Plant Physiol.
  doi: 10.1093/plphys/kiac096
  contributor:
    fullname: Lynch
– volume: 15
  start-page: 630
  ident: B35
  article-title: A compressed variance component mixed model for detecting QTNs, and QTN-by-environment and QTN-by-QTN interactions in genome-wide association studies.
  publication-title: Mol. Plant
  doi: 10.1016/j.molp.2022.02.012
  contributor:
    fullname: Li
– volume: 8
  year: 2017
  ident: B51
  article-title: Soybean LEC2 regulates subsets of genes involved in controlling the biosynthesis and catabolism of seed storage substances and seed development.
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2017.01604
  contributor:
    fullname: Manan
– volume: 45
  start-page: 3487
  year: 2017
  ident: B15
  article-title: Application of sorting and next generation sequencing to study 5′-UTR influence on translation efficiency in Escherichia coli.
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkw1141
  contributor:
    fullname: Evfratov
– volume: 131
  start-page: 1661
  year: 2003
  ident: B18
  article-title: Arabidopsis haiku mutants reveal new controls of seed size by endosperm.
  publication-title: Plant Physiol.
  doi: 10.1104/pp.102.018762
  contributor:
    fullname: Garcia
– volume: 180
  start-page: 1198
  year: 2019
  ident: B8
  article-title: Multi-omics analysis reveals sequential roles for ABA during seed maturation.
  publication-title: Plant Physiol.
  doi: 10.1104/pp.19.00338
  contributor:
    fullname: Chauffour
– volume: 271
  start-page: 143
  year: 2018
  ident: B54
  article-title: The antagonistic basic helix-loop-helix partners BEE and IBH1 contribute to control plant tolerance to abiotic stress.
  publication-title: Plant Sci.
  doi: 10.1016/j.plantsci.2018.03.024
  contributor:
    fullname: Moreno
– volume: 3
  year: 2018
  ident: B2
  article-title: A single amino acid change in the Marburg virus glycoprotein arises during serial cell culture passages and attenuates the virus in a macaque model of disease.
  publication-title: mSphere
  doi: 10.1128/mSphere.00401-17
  contributor:
    fullname: Alfson
– volume: 2014
  year: 2014
  ident: B1
  article-title: Effect of tillage practices on soil properties and crop productivity in wheat-mungbean-rice cropping system under subtropical climatic conditions.
  publication-title: Sci. World J.
  doi: 10.1155/2014/437283
  contributor:
    fullname: Alam
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Snippet Although mungbean ( (L.) R. Wilczek) is an important legume crop, its seed yield is relatively low. To address this issue, here 196 accessions with 3,607,508...
Although mungbean ( Vigna radiata (L.) R. Wilczek) is an important legume crop, its seed yield is relatively low. To address this issue, here 196 accessions...
Although mungbean (Vigna radiata (L.) R. Wilczek) is an important legume crop, its seed yield is relatively low. To address this issue, here 196 accessions...
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StartPage 997988
SubjectTerms multi-omics analysis
multiple genome-wide association studies
Plant Science
QTN-by-environment interactions
RT-qPCR
VrEmp24/25
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Title Genome-wide association studies provide genetic insights into natural variation of seed-size-related traits in mungbean
URI https://www.ncbi.nlm.nih.gov/pubmed/36311130
https://www.proquest.com/docview/2730646330/abstract/
https://pubmed.ncbi.nlm.nih.gov/PMC9608654
https://doaj.org/article/9341e69acef345e7b306bffa3c27bf40
Volume 13
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