Fractionation of the Gulf toadfish intestinal precipitate organic matrix reveals potential functions of individual proteins
The regulatory mechanisms behind the production of CaCO3 in the marine teleost intestine are poorly studied despite being essential for osmoregulation and responsible for a conservatively estimated 3–15% of annual oceanic CaCO3 production. It has recently been reported that the intestinally derived...
Saved in:
Published in | Comparative biochemistry and physiology. Part A, Molecular & integrative physiology Vol. 208; pp. 35 - 45 |
---|---|
Main Authors | , |
Format | Journal Article |
Language | English |
Published |
United States
Elsevier Inc
01.06.2017
|
Subjects | |
Online Access | Get full text |
Cover
Loading…
Abstract | The regulatory mechanisms behind the production of CaCO3 in the marine teleost intestine are poorly studied despite being essential for osmoregulation and responsible for a conservatively estimated 3–15% of annual oceanic CaCO3 production. It has recently been reported that the intestinally derived precipitates produced by fish as a byproduct of their osmoregulatory strategy form in conjunction with a proteinaceous matrix containing nearly 150 unique proteins. The individual functions of these proteins have not been the subject of investigation until now. Here, organic matrix was extracted from precipitates produced by Gulf toadfish (Opsanus beta) and the matrix proteins were fractionated by their charge using strong anion exchange chromatography. The precipitation regulatory abilities of the individual fractions were then analyzed using a recently developed in vitro calcification assay, and the protein constituents of each fraction were determined by mass spectrometry. The different fractions were found to have differing effects on both the rate of carbonate mineral production, as well as the morphology of the crystals that form. Using data collected from the calcification assay as well as the mass spectrometry experiments, individual calcification promotional indices were calculated for each protein, giving the first insight into the functions each of these matrix proteins may play in regulating precipitation. |
---|---|
AbstractList | The regulatory mechanisms behind the production of CaCO
in the marine teleost intestine are poorly studied despite being essential for osmoregulation and responsible for a conservatively estimated 3-15% of annual oceanic CaCO
production. It has recently been reported that the intestinally derived precipitates produced by fish as a byproduct of their osmoregulatory strategy form in conjunction with a proteinaceous matrix containing nearly 150 unique proteins. The individual functions of these proteins have not been the subject of investigation until now. Here, organic matrix was extracted from precipitates produced by Gulf toadfish (Opsanus beta) and the matrix proteins were fractionated by their charge using strong anion exchange chromatography. The precipitation regulatory abilities of the individual fractions were then analyzed using a recently developed in vitro calcification assay, and the protein constituents of each fraction were determined by mass spectrometry. The different fractions were found to have differing effects on both the rate of carbonate mineral production, as well as the morphology of the crystals that form. Using data collected from the calcification assay as well as the mass spectrometry experiments, individual calcification promotional indices were calculated for each protein, giving the first insight into the functions each of these matrix proteins may play in regulating precipitation. The regulatory mechanisms behind the production of CaCO3 in the marine teleost intestine are poorly studied despite being essential for osmoregulation and responsible for a conservatively estimated 3–15% of annual oceanic CaCO3 production. It has recently been reported that the intestinally derived precipitates produced by fish as a byproduct of their osmoregulatory strategy form in conjunction with a proteinaceous matrix containing nearly 150 unique proteins. The individual functions of these proteins have not been the subject of investigation until now. Here, organic matrix was extracted from precipitates produced by Gulf toadfish (Opsanus beta) and the matrix proteins were fractionated by their charge using strong anion exchange chromatography. The precipitation regulatory abilities of the individual fractions were then analyzed using a recently developed in vitro calcification assay, and the protein constituents of each fraction were determined by mass spectrometry. The different fractions were found to have differing effects on both the rate of carbonate mineral production, as well as the morphology of the crystals that form. Using data collected from the calcification assay as well as the mass spectrometry experiments, individual calcification promotional indices were calculated for each protein, giving the first insight into the functions each of these matrix proteins may play in regulating precipitation. The regulatory mechanisms behind the production of CaCO3 in the marine teleost intestine are poorly studied despite being essential for osmoregulation and responsible for a conservatively estimated 3-15% of annual oceanic CaCO3 production. It has recently been reported that the intestinally derived precipitates produced by fish as a byproduct of their osmoregulatory strategy form in conjunction with a proteinaceous matrix containing nearly 150 unique proteins. The individual functions of these proteins have not been the subject of investigation until now. Here, organic matrix was extracted from precipitates produced by Gulf toadfish (Opsanus beta) and the matrix proteins were fractionated by their charge using strong anion exchange chromatography. The precipitation regulatory abilities of the individual fractions were then analyzed using a recently developed in vitro calcification assay, and the protein constituents of each fraction were determined by mass spectrometry. The different fractions were found to have differing effects on both the rate of carbonate mineral production, as well as the morphology of the crystals that form. Using data collected from the calcification assay as well as the mass spectrometry experiments, individual calcification promotional indices were calculated for each protein, giving the first insight into the functions each of these matrix proteins may play in regulating precipitation.The regulatory mechanisms behind the production of CaCO3 in the marine teleost intestine are poorly studied despite being essential for osmoregulation and responsible for a conservatively estimated 3-15% of annual oceanic CaCO3 production. It has recently been reported that the intestinally derived precipitates produced by fish as a byproduct of their osmoregulatory strategy form in conjunction with a proteinaceous matrix containing nearly 150 unique proteins. The individual functions of these proteins have not been the subject of investigation until now. Here, organic matrix was extracted from precipitates produced by Gulf toadfish (Opsanus beta) and the matrix proteins were fractionated by their charge using strong anion exchange chromatography. The precipitation regulatory abilities of the individual fractions were then analyzed using a recently developed in vitro calcification assay, and the protein constituents of each fraction were determined by mass spectrometry. The different fractions were found to have differing effects on both the rate of carbonate mineral production, as well as the morphology of the crystals that form. Using data collected from the calcification assay as well as the mass spectrometry experiments, individual calcification promotional indices were calculated for each protein, giving the first insight into the functions each of these matrix proteins may play in regulating precipitation. |
Author | Grosell, Martin Schauer, Kevin L. |
Author_xml | – sequence: 1 givenname: Kevin L. surname: Schauer fullname: Schauer, Kevin L. email: kschauer@rsmas.miami.edu – sequence: 2 givenname: Martin surname: Grosell fullname: Grosell, Martin email: mgrosell@rsmas.miami.edu |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/28315772$$D View this record in MEDLINE/PubMed |
BookMark | eNqFkTtvFDEUhS0URB7wByiQS5oZ_JinRIMiEpAi0UBteexrclez9mB7VkT8eTy7SUMRXNjX0neO5XMuyZkPHgh5y1nNGe8-7GozLboWjPc1kzVj_QtywVvJq0ZKcVZmNrZVVy7n5DKlHSur4c0rci4Gydu-Fxfkz03UJmPwettocDTfA71d5zIEbR2me4o-Q8ro9UyXCAYXzDoDDfGn9mjoXueIv2mEA-g50SVk8BkL7FZ_tE6bLXqLB7Tr0aQg6NNr8tIVBbx5PK_Ij5vP36-_VHffbr9ef7qrjBzGXOnOStkJ3QppHdOSu8E02pmu533fTo2xwDvdiXbiBsZ2cj2zkncSGsdky0Z5Rd6ffMvDv9byFbXHZGCetYewJiWOuUjeNP9F-dCPfBSiEQV994iu0x6sWiLudXxQT9kWYDgBJoaUIjhltuBKIDlqnBVnaqtR7dRWo9pqVEyqUmORin-kT-7Pij6eRFCyPCBElQyCN2CxtJaVDfic_C9Wu7gf |
CitedBy_id | crossref_primary_10_1016_j_cbd_2018_06_004 crossref_primary_10_1016_j_scitotenv_2024_170044 crossref_primary_10_1029_2024GB008176 crossref_primary_10_1016_j_scitotenv_2024_169895 crossref_primary_10_1002_lno_11339 crossref_primary_10_1152_physiol_00005_2023 crossref_primary_10_1016_j_cbpa_2018_03_007 crossref_primary_10_1016_j_cbpa_2024_111768 |
Cites_doi | 10.1529/biophysj.106.100636 10.1074/mcp.M115.049726 10.2113/0540001 10.1093/bioinformatics/bti610 10.1194/jlr.R800033-JLR200 10.1152/ajprenal.00210.2013 10.4319/lo.1991.36.6.1227 10.1007/s10126-016-9724-6 10.1016/0016-7037(75)90102-7 10.1146/annurev.marine.010908.163834 10.1073/pnas.94.16.8411 10.1093/icb/24.4.933 10.1242/jeb.027730 10.1073/pnas.1015895108 10.1002/pmic.201500290 10.1126/science.1173793 10.1016/j.msec.2010.08.005 10.1080/02648725.2013.801232 10.1093/nar/gku1221 10.1021/bi400110b 10.1038/nmat4193 10.1073/pnas.0605748103 10.1186/s13062-016-0159-9 10.1007/BF00218561 10.1016/S0005-2736(02)00600-4 10.1111/j.1748-1716.2010.02241.x 10.1002/prca.201500071 10.1021/cr078270o 10.1126/science.1157972 10.1016/j.margen.2016.03.011 10.1021/cr050358j 10.1016/j.gca.2006.08.017 10.1038/srep34494 10.1002/jez.1402480302 10.1146/annurev-biochem-060310-170328 10.1021/cr0503557 |
ContentType | Journal Article |
Copyright | 2017 Elsevier Inc. Copyright © 2017 Elsevier Inc. All rights reserved. |
Copyright_xml | – notice: 2017 Elsevier Inc. – notice: Copyright © 2017 Elsevier Inc. All rights reserved. |
DBID | AAYXX CITATION CGR CUY CVF ECM EIF NPM 7X8 7S9 L.6 |
DOI | 10.1016/j.cbpa.2017.03.007 |
DatabaseName | CrossRef Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed MEDLINE - Academic AGRICOLA AGRICOLA - Academic |
DatabaseTitle | CrossRef MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) MEDLINE - Academic AGRICOLA AGRICOLA - Academic |
DatabaseTitleList | MEDLINE MEDLINE - Academic AGRICOLA |
Database_xml | – sequence: 1 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 2 dbid: EIF name: MEDLINE url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search sourceTypes: Index Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Anatomy & Physiology Chemistry |
EISSN | 1531-4332 |
EndPage | 45 |
ExternalDocumentID | 28315772 10_1016_j_cbpa_2017_03_007 S1095643317300673 |
Genre | Research Support, U.S. Gov't, Non-P.H.S Research Support, Non-U.S. Gov't Journal Article |
GroupedDBID | --K --M -~X .GJ .~1 0R~ 1B1 1RT 1~. 1~5 29F 4.4 457 4G. 53G 5VS 7-5 71M 85S 8P~ AABNK AACTN AAEDW AAIAV AAIKJ AAKOC AALRI AAOAW AAQFI AAQXK AAXUO ABFNM ABGSF ABMAC ABPPZ ABUDA ABXDB ABYKQ ACDAQ ACGFS ACIUM ACNCT ACRLP ADBBV ADEZE ADMUD ADUVX AEBSH AEHWI AEKER AFKWA AFTJW AFXIZ AGHFR AGRDE AGUBO AGYEJ AI. AIEXJ AIKHN AITUG AJBFU AJOXV ALMA_UNASSIGNED_HOLDINGS AMFUW AMRAJ ASPBG AVWKF AXJTR AZFZN BKOJK BLXMC DOVZS EBS EFJIC EFLBG EJD EO8 EO9 EP2 EP3 F5P FDB FEDTE FGOYB FIRID FNPLU FYGXN G-Q GBLVA HVGLF HZ~ H~9 IHE J1W KOM M41 MO0 MVM N9A O-L O9- OAUVE OZT P-8 P-9 P2P PC. Q38 R2- ROL RPZ SCU SDF SDG SDP SES SEW SSU SSZ T5K VH1 ZXP ~02 ~G- ~KM AAHBH AATTM AAXKI AAYWO AAYXX ABWVN ACRPL ADNMO AEIPS AFJKZ AGCQF AGQPQ AGRNS AIIUN ANKPU BNPGV CITATION SSH CGR CUY CVF ECM EIF NPM 7X8 7S9 L.6 |
ID | FETCH-LOGICAL-c389t-a6d3362a523df0a31f8c4afc671775b4cde16a625b1ce95bf70d3163e4f035093 |
IEDL.DBID | .~1 |
ISSN | 1095-6433 1531-4332 |
IngestDate | Fri Jul 11 13:02:55 EDT 2025 Fri Jul 11 06:54:29 EDT 2025 Wed Feb 19 02:43:51 EST 2025 Tue Jul 01 01:24:29 EDT 2025 Thu Apr 24 23:13:02 EDT 2025 Fri Feb 23 02:27:51 EST 2024 |
IsPeerReviewed | true |
IsScholarly | true |
Keywords | Organic matrix Calcification assay MS Opsanus beta Proteomics Biomineralization pI SEM SAX Mass spectrometry |
Language | English |
License | Copyright © 2017 Elsevier Inc. All rights reserved. |
LinkModel | DirectLink |
MergedId | FETCHMERGED-LOGICAL-c389t-a6d3362a523df0a31f8c4afc671775b4cde16a625b1ce95bf70d3163e4f035093 |
Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
PMID | 28315772 |
PQID | 1879192242 |
PQPubID | 23479 |
PageCount | 11 |
ParticipantIDs | proquest_miscellaneous_2000413144 proquest_miscellaneous_1879192242 pubmed_primary_28315772 crossref_citationtrail_10_1016_j_cbpa_2017_03_007 crossref_primary_10_1016_j_cbpa_2017_03_007 elsevier_sciencedirect_doi_10_1016_j_cbpa_2017_03_007 |
ProviderPackageCode | CITATION AAYXX |
PublicationCentury | 2000 |
PublicationDate | June 2017 2017-06-00 20170601 |
PublicationDateYYYYMMDD | 2017-06-01 |
PublicationDate_xml | – month: 06 year: 2017 text: June 2017 |
PublicationDecade | 2010 |
PublicationPlace | United States |
PublicationPlace_xml | – name: United States |
PublicationTitle | Comparative biochemistry and physiology. Part A, Molecular & integrative physiology |
PublicationTitleAlternate | Comp Biochem Physiol A Mol Integr Physiol |
PublicationYear | 2017 |
Publisher | Elsevier Inc |
Publisher_xml | – name: Elsevier Inc |
References | Liebler, Zimmerman (bb0095) 2013; 52 Beaudette, Popp, Dittmar (bb0010) 2016; 16 Doney, Fabry, Feely, Kleypas (bb0040) 2009; 1 Grosell (bb0055) 2013 Marshall, Grosell (bb0115) 2006 Suzuki, Saruwatari, Kogure, Yamamoto, Nishimura, Kato, Nagasawa (bb0165) 2009; 325 Adewole, Erhabor, Adewole, Ojo, Oshokoya, Wolfe, Prenni (bb0005) 2016; 10 Millero (bb0120) 2007; 107 Schauer, LeMoine, Pelin, Corradi, Warren, Grosell (bb0155) 2016; 6 Heinemann, Gummich, Radmacher, Fritz (bb0065) 2011; 31 Humbert, Kirsch, Simonneaux (bb0070) 1986; 245 Morse, Arvidson, Lüttge (bb0130) 2007; 107 Constantz, Weiner (bb0030) 1988; 248 Berner (bb0015) 1975; 39 Rahman, Shinjo (bb0140) 2012 Cusack, Freer (bb0035) 2008; 108 Grosell, Mager, Williams, Taylor (bb0060) 2009; 212 Kozlowski (bb0085) 2016; 11 Perry, Salter, Harborne, Crowley, Jelks, Wilson (bb0135) 2011; 108 Conesa, Götz, García-Gómez, Terol, Talón, Robles (bb0025) 2005; 21 Wilson, Millero, Taylor, Walsh, Christensen, Jennings, Grosell (bb0195) 2009; 323 Riley, Rush, Rose, Richards, Kwiecien, Bailey, Hebert, Westphall, Coon (bb0145) 2015; 14 Grosell (bb0050) 2011; 202 Smeets, Cho, Kempen, Sommerdijk, De Yoreo (bb0160) 2015; 14 Woosley, Millero, Grosell (bb0200) 2012 Xu, Jaffrey (bb0205) 2013; 29 Marchler-Bauer, Derbyshire, Gonzales, Lu, Chitsaz, Geer, Geer, He, Gwadz, Hurwitz, Lanczycki, Lu, Marchler, Song, Thanki, Wang, Yamashita, Zhang, Zheng, Bryant (bb0105) 2015; 43 Wheeler, Sikes (bb0185) 1984; 24 Elhadj, De Yoreo, Hoyer, Dove (bb0045) 2006; 103 Komander, Rape (bb0080) 2012; 81 Wilson, Wilson, Grosell (bb0190) 2002; 1566 Burke, Dennis (bb0020) 2009; 50 Weiner, Dove (bb0180) 2003; 54 Hüning, Lange, Ramesh, Jacob, Jackson, Panknin, Gutowska, Philipp, Rosenstiel, Lucassen, Melzner (bb0075) 2016; 27 Schauer, Freund, Prenni, Curthoys (bb0150) 2013; 305 Wang, Roberts, Paschke, Shea, Masters, Kim (bb0175) 1997; 94 Mann, Siedler, Treccani, Heinemann, Fritz (bb0100) 2007; 93 Marin, Luquet (bb0110) 2007 Morse, Andersson, Mackenzie (bb0125) 2006; 70 Walsh, Blackwelder, Gill, Danulat, Mommsen (bb0170) 1991; 36 Liang, Xie, Gao, Xu, Yan, Jia, Xiang, Xie, Zhang (bb0090) 2016; 18 Berner (10.1016/j.cbpa.2017.03.007_bb0015) 1975; 39 Wheeler (10.1016/j.cbpa.2017.03.007_bb0185) 1984; 24 Kozlowski (10.1016/j.cbpa.2017.03.007_bb0085) 2016; 11 Wang (10.1016/j.cbpa.2017.03.007_bb0175) 1997; 94 Burke (10.1016/j.cbpa.2017.03.007_bb0020) 2009; 50 Wilson (10.1016/j.cbpa.2017.03.007_bb0195) 2009; 323 Walsh (10.1016/j.cbpa.2017.03.007_bb0170) 1991; 36 Marin (10.1016/j.cbpa.2017.03.007_bb0110) 2007 Adewole (10.1016/j.cbpa.2017.03.007_bb0005) 2016; 10 Woosley (10.1016/j.cbpa.2017.03.007_bb0200) 2012 Morse (10.1016/j.cbpa.2017.03.007_bb0130) 2007; 107 Elhadj (10.1016/j.cbpa.2017.03.007_bb0045) 2006; 103 Humbert (10.1016/j.cbpa.2017.03.007_bb0070) 1986; 245 Doney (10.1016/j.cbpa.2017.03.007_bb0040) 2009; 1 Liang (10.1016/j.cbpa.2017.03.007_bb0090) 2016; 18 Mann (10.1016/j.cbpa.2017.03.007_bb0100) 2007; 93 Smeets (10.1016/j.cbpa.2017.03.007_bb0160) 2015; 14 Millero (10.1016/j.cbpa.2017.03.007_bb0120) 2007; 107 Rahman (10.1016/j.cbpa.2017.03.007_bb0140) 2012 Grosell (10.1016/j.cbpa.2017.03.007_bb0050) 2011; 202 Liebler (10.1016/j.cbpa.2017.03.007_bb0095) 2013; 52 Schauer (10.1016/j.cbpa.2017.03.007_bb0155) 2016; 6 Wilson (10.1016/j.cbpa.2017.03.007_bb0190) 2002; 1566 Marchler-Bauer (10.1016/j.cbpa.2017.03.007_bb0105) 2015; 43 Suzuki (10.1016/j.cbpa.2017.03.007_bb0165) 2009; 325 Conesa (10.1016/j.cbpa.2017.03.007_bb0025) 2005; 21 Morse (10.1016/j.cbpa.2017.03.007_bb0125) 2006; 70 Weiner (10.1016/j.cbpa.2017.03.007_bb0180) 2003; 54 Beaudette (10.1016/j.cbpa.2017.03.007_bb0010) 2016; 16 Schauer (10.1016/j.cbpa.2017.03.007_bb0150) 2013; 305 Grosell (10.1016/j.cbpa.2017.03.007_bb0055) 2013 Perry (10.1016/j.cbpa.2017.03.007_bb0135) 2011; 108 Komander (10.1016/j.cbpa.2017.03.007_bb0080) 2012; 81 Constantz (10.1016/j.cbpa.2017.03.007_bb0030) 1988; 248 Hüning (10.1016/j.cbpa.2017.03.007_bb0075) 2016; 27 Cusack (10.1016/j.cbpa.2017.03.007_bb0035) 2008; 108 Xu (10.1016/j.cbpa.2017.03.007_bb0205) 2013; 29 Grosell (10.1016/j.cbpa.2017.03.007_bb0060) 2009; 212 Heinemann (10.1016/j.cbpa.2017.03.007_bb0065) 2011; 31 Marshall (10.1016/j.cbpa.2017.03.007_bb0115) 2006 Riley (10.1016/j.cbpa.2017.03.007_bb0145) 2015; 14 |
References_xml | – volume: 52 start-page: 3797 year: 2013 end-page: 3806 ident: bb0095 article-title: Targeted quantitation of proteins by mass spectrometry publication-title: Biochemistry – volume: 107 start-page: 342 year: 2007 end-page: 381 ident: bb0130 article-title: Calcium carbonate formation and dissolution publication-title: Chem. Rev. – volume: 323 start-page: 359 year: 2009 end-page: 362 ident: bb0195 article-title: Contribution of fish to the marine inorganic carbon cycle publication-title: Science – volume: 6 start-page: 34494 year: 2016 ident: bb0155 article-title: A proteinaceous organic matrix regulates carbonate mineral production in the marine teleost intestine publication-title: Sci. Rep. – volume: 103 start-page: 19237 year: 2006 end-page: 19242 ident: bb0045 article-title: Role of molecular charge and hydrophilicity in regulating the kinetics of crystal growth publication-title: Proc. Natl. Acad. Sci. U. S. A. – volume: 10 start-page: 547 year: 2016 end-page: 553 ident: bb0005 article-title: Proteomic profiling of eccrine sweat reveals its potential as a diagnostic biofluid for active tuberculosis publication-title: Proteomics Clin. Appl. – volume: 108 start-page: 4433 year: 2008 end-page: 4454 ident: bb0035 article-title: Biomineralization: elemental and organic influence in carbonate systems publication-title: Chem. Rev. – volume: 325 start-page: 1388 year: 2009 end-page: 1390 ident: bb0165 article-title: An acidic matrix protein, Pif, is a key macromolecule for nacre formation publication-title: Science – volume: 27 start-page: 57 year: 2016 end-page: 67 ident: bb0075 article-title: A shell regeneration assay to identify biomineralization candidate genes in mytilid mussels publication-title: Mar. Genomics – volume: 36 start-page: 1227 year: 1991 end-page: 1232 ident: bb0170 article-title: Carbonate deposits in marine fish intestines: a new source of biomineralization publication-title: Limnol. Oceanogr. – start-page: 117 year: 2012 ident: bb0200 article-title: The solubility of fish-produced high magnesium calcite in seawater publication-title: J. Geophys. Res. Oceans – start-page: 175 year: 2013 end-page: 203 ident: bb0055 article-title: Intestinal transport publication-title: The Physiology of Fishes – volume: 1 start-page: 169 year: 2009 end-page: 192 ident: bb0040 article-title: Ocean acidification: the other CO publication-title: Annu. Rev. Mar. Sci. – volume: 108 start-page: 3865 year: 2011 end-page: 3869 ident: bb0135 article-title: Fish as major carbonate mud producers and missing components of the tropical carbonate factory publication-title: Proc. Natl. Acad. Sci. U. S. A. – volume: 14 start-page: 394 year: 2015 end-page: 399 ident: bb0160 article-title: Calcium carbonate nucleation driven by ion binding in a biomimetic matrix revealed by in situ electron microscopy publication-title: Nat. Mater. – volume: 39 start-page: 489 year: 1975 end-page: 504 ident: bb0015 article-title: The role of magnesium in the crystal growth of calcite and aragonite from sea water publication-title: Geochim. Cosmochim. Acta – volume: 70 start-page: 5814 year: 2006 end-page: 5830 ident: bb0125 article-title: Initial responses of carbonate-rich shelf sediments to rising atmospheric pCO publication-title: Geochim. Cosmochim. Acta – volume: 29 start-page: 73 year: 2013 end-page: 109 ident: bb0205 article-title: Proteomic identification of protein ubiquitination events publication-title: Biotechnol. Genet. Eng. Rev. – volume: 50 start-page: S237 year: 2009 end-page: S242 ident: bb0020 article-title: Phospholipase A2 structure/function, mechanism, and signaling publication-title: J. Lipid Res. – volume: 18 start-page: 645 year: 2016 end-page: 658 ident: bb0090 article-title: Identification and characterization of the lysine-rich matrix protein family in publication-title: Mar. Biotechnol. – volume: 24 start-page: 933 year: 1984 end-page: 944 ident: bb0185 article-title: Regulation of carbonate calcification by organic matrix publication-title: Am. Zool. – volume: 248 start-page: 253 year: 1988 end-page: 258 ident: bb0030 article-title: Acidic macromolecules associated with the mineral phase of scleractinian coral skeletons publication-title: J. Exp. Zool. – volume: 107 start-page: 308 year: 2007 end-page: 341 ident: bb0120 article-title: The marine inorganic carbon cycle publication-title: Chem. Rev. – start-page: 273 year: 2007 end-page: 290 ident: bb0110 article-title: Unusually acidic proteins in biomineralization publication-title: Handbook of Biomineralization: Biological Aspects and Structure Formation – volume: 94 start-page: 8411 year: 1997 end-page: 8416 ident: bb0175 article-title: Three-dimensional structure of NADPH-cytochrome P450 reductase: prototype for FMN- and FAD-containing enzymes publication-title: Proc. Natl. Acad. Sci. U. S. A. – volume: 305 start-page: F628 year: 2013 end-page: F640 ident: bb0150 article-title: Proteomic profiling and pathway analysis of the response of rat renal proximal convoluted tubules to metabolic acidosis publication-title: Am. J. Physiol. Renal Physiol. – volume: 31 start-page: 99 year: 2011 end-page: 105 ident: bb0065 article-title: Modification of CaCO publication-title: Mater. Sci. Eng. C Biomim. Supramol. Syst. – volume: 202 start-page: 421 year: 2011 end-page: 434 ident: bb0050 article-title: Intestinal anion exchange in marine teleosts is involved in osmoregulation and contributes to the oceanic inorganic carbon cycle publication-title: Acta Physiol. – volume: 43 start-page: D222 year: 2015 end-page: D226 ident: bb0105 article-title: CDD: NCBI's conserved domain database publication-title: Nucleic Acids Res. – start-page: 49 year: 2012 end-page: 62 ident: bb0140 article-title: Control of CaCO publication-title: Advanced Topics in Biomineralization – volume: 1566 start-page: 182 year: 2002 end-page: 193 ident: bb0190 article-title: Intestinal bicarbonate secretion by marine teleost fish—why and how? publication-title: Biochim. Biophys. Acta – volume: 81 start-page: 203 year: 2012 end-page: 229 ident: bb0080 article-title: The ubiquitin code publication-title: Annu. Rev. Biochem. – volume: 21 start-page: 3674 year: 2005 end-page: 3676 ident: bb0025 article-title: Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research publication-title: Bioinformatics – start-page: 177 year: 2006 end-page: 230 ident: bb0115 article-title: Ion transport, osmoregulation, and acid-base balance publication-title: The Physiology of Fishes – volume: 93 start-page: 1246 year: 2007 end-page: 1254 ident: bb0100 article-title: Perlinhibin, a cysteine-, histidine-, and arginine-rich miniprotein from abalone ( publication-title: Biophys. J. – volume: 54 start-page: 1 year: 2003 end-page: 29 ident: bb0180 article-title: An overview of biomineralization processes and the problem of the vital effect publication-title: Rev. Mineral. Geochem. – volume: 11 start-page: 55 year: 2016 ident: bb0085 article-title: IPC — isoelectric point calculator publication-title: Biol. Direct – volume: 212 start-page: 1684 year: 2009 end-page: 1696 ident: bb0060 article-title: High rates of HCO publication-title: J. Exp. Biol. – volume: 16 start-page: 273 year: 2016 end-page: 287 ident: bb0010 article-title: Proteomic techniques to probe the ubiquitin landscape publication-title: Proteomics – volume: 14 start-page: 2644 year: 2015 end-page: 2660 ident: bb0145 article-title: The negative mode proteome with activated ion negative electron transfer dissociation (AI-NETD) publication-title: Mol. Cell. Proteomics – volume: 245 start-page: 599 year: 1986 end-page: 604 ident: bb0070 article-title: Is mucus involved in biocrystallization? publication-title: Cell Tissue Res. – volume: 93 start-page: 1246 year: 2007 ident: 10.1016/j.cbpa.2017.03.007_bb0100 article-title: Perlinhibin, a cysteine-, histidine-, and arginine-rich miniprotein from abalone (Haliotis laevigata) nacre, inhibits in vitro calcium carbonate crystallization publication-title: Biophys. J. doi: 10.1529/biophysj.106.100636 – volume: 14 start-page: 2644 year: 2015 ident: 10.1016/j.cbpa.2017.03.007_bb0145 article-title: The negative mode proteome with activated ion negative electron transfer dissociation (AI-NETD) publication-title: Mol. Cell. Proteomics doi: 10.1074/mcp.M115.049726 – volume: 54 start-page: 1 year: 2003 ident: 10.1016/j.cbpa.2017.03.007_bb0180 article-title: An overview of biomineralization processes and the problem of the vital effect publication-title: Rev. Mineral. Geochem. doi: 10.2113/0540001 – volume: 21 start-page: 3674 year: 2005 ident: 10.1016/j.cbpa.2017.03.007_bb0025 article-title: Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research publication-title: Bioinformatics doi: 10.1093/bioinformatics/bti610 – volume: 50 start-page: S237 year: 2009 ident: 10.1016/j.cbpa.2017.03.007_bb0020 article-title: Phospholipase A2 structure/function, mechanism, and signaling publication-title: J. Lipid Res. doi: 10.1194/jlr.R800033-JLR200 – volume: 305 start-page: F628 year: 2013 ident: 10.1016/j.cbpa.2017.03.007_bb0150 article-title: Proteomic profiling and pathway analysis of the response of rat renal proximal convoluted tubules to metabolic acidosis publication-title: Am. J. Physiol. Renal Physiol. doi: 10.1152/ajprenal.00210.2013 – start-page: 117 year: 2012 ident: 10.1016/j.cbpa.2017.03.007_bb0200 article-title: The solubility of fish-produced high magnesium calcite in seawater publication-title: J. Geophys. Res. Oceans – volume: 36 start-page: 1227 year: 1991 ident: 10.1016/j.cbpa.2017.03.007_bb0170 article-title: Carbonate deposits in marine fish intestines: a new source of biomineralization publication-title: Limnol. Oceanogr. doi: 10.4319/lo.1991.36.6.1227 – volume: 18 start-page: 645 year: 2016 ident: 10.1016/j.cbpa.2017.03.007_bb0090 article-title: Identification and characterization of the lysine-rich matrix protein family in Pinctada fucata: indicative of roles in shell formation publication-title: Mar. Biotechnol. doi: 10.1007/s10126-016-9724-6 – volume: 39 start-page: 489 year: 1975 ident: 10.1016/j.cbpa.2017.03.007_bb0015 article-title: The role of magnesium in the crystal growth of calcite and aragonite from sea water publication-title: Geochim. Cosmochim. Acta doi: 10.1016/0016-7037(75)90102-7 – volume: 1 start-page: 169 year: 2009 ident: 10.1016/j.cbpa.2017.03.007_bb0040 article-title: Ocean acidification: the other CO2 problem publication-title: Annu. Rev. Mar. Sci. doi: 10.1146/annurev.marine.010908.163834 – volume: 94 start-page: 8411 year: 1997 ident: 10.1016/j.cbpa.2017.03.007_bb0175 article-title: Three-dimensional structure of NADPH-cytochrome P450 reductase: prototype for FMN- and FAD-containing enzymes publication-title: Proc. Natl. Acad. Sci. U. S. A. doi: 10.1073/pnas.94.16.8411 – volume: 24 start-page: 933 year: 1984 ident: 10.1016/j.cbpa.2017.03.007_bb0185 article-title: Regulation of carbonate calcification by organic matrix publication-title: Am. Zool. doi: 10.1093/icb/24.4.933 – volume: 212 start-page: 1684 year: 2009 ident: 10.1016/j.cbpa.2017.03.007_bb0060 article-title: High rates of HCO3- secretion and Cl- absorption against adverse gradients in the marine teleost intestine: the involvement of an electrogenic anion exchanger and H+-pump metabolon? publication-title: J. Exp. Biol. doi: 10.1242/jeb.027730 – start-page: 273 year: 2007 ident: 10.1016/j.cbpa.2017.03.007_bb0110 article-title: Unusually acidic proteins in biomineralization – volume: 108 start-page: 3865 year: 2011 ident: 10.1016/j.cbpa.2017.03.007_bb0135 article-title: Fish as major carbonate mud producers and missing components of the tropical carbonate factory publication-title: Proc. Natl. Acad. Sci. U. S. A. doi: 10.1073/pnas.1015895108 – volume: 16 start-page: 273 year: 2016 ident: 10.1016/j.cbpa.2017.03.007_bb0010 article-title: Proteomic techniques to probe the ubiquitin landscape publication-title: Proteomics doi: 10.1002/pmic.201500290 – volume: 325 start-page: 1388 year: 2009 ident: 10.1016/j.cbpa.2017.03.007_bb0165 article-title: An acidic matrix protein, Pif, is a key macromolecule for nacre formation publication-title: Science doi: 10.1126/science.1173793 – volume: 31 start-page: 99 year: 2011 ident: 10.1016/j.cbpa.2017.03.007_bb0065 article-title: Modification of CaCO3 precipitation rates by water-soluble nacre proteins publication-title: Mater. Sci. Eng. C Biomim. Supramol. Syst. doi: 10.1016/j.msec.2010.08.005 – volume: 29 start-page: 73 year: 2013 ident: 10.1016/j.cbpa.2017.03.007_bb0205 article-title: Proteomic identification of protein ubiquitination events publication-title: Biotechnol. Genet. Eng. Rev. doi: 10.1080/02648725.2013.801232 – volume: 43 start-page: D222 year: 2015 ident: 10.1016/j.cbpa.2017.03.007_bb0105 article-title: CDD: NCBI's conserved domain database publication-title: Nucleic Acids Res. doi: 10.1093/nar/gku1221 – volume: 52 start-page: 3797 year: 2013 ident: 10.1016/j.cbpa.2017.03.007_bb0095 article-title: Targeted quantitation of proteins by mass spectrometry publication-title: Biochemistry doi: 10.1021/bi400110b – start-page: 175 year: 2013 ident: 10.1016/j.cbpa.2017.03.007_bb0055 article-title: Intestinal transport – volume: 14 start-page: 394 year: 2015 ident: 10.1016/j.cbpa.2017.03.007_bb0160 article-title: Calcium carbonate nucleation driven by ion binding in a biomimetic matrix revealed by in situ electron microscopy publication-title: Nat. Mater. doi: 10.1038/nmat4193 – volume: 103 start-page: 19237 year: 2006 ident: 10.1016/j.cbpa.2017.03.007_bb0045 article-title: Role of molecular charge and hydrophilicity in regulating the kinetics of crystal growth publication-title: Proc. Natl. Acad. Sci. U. S. A. doi: 10.1073/pnas.0605748103 – volume: 11 start-page: 55 year: 2016 ident: 10.1016/j.cbpa.2017.03.007_bb0085 article-title: IPC — isoelectric point calculator publication-title: Biol. Direct doi: 10.1186/s13062-016-0159-9 – volume: 245 start-page: 599 year: 1986 ident: 10.1016/j.cbpa.2017.03.007_bb0070 article-title: Is mucus involved in biocrystallization? publication-title: Cell Tissue Res. doi: 10.1007/BF00218561 – volume: 1566 start-page: 182 year: 2002 ident: 10.1016/j.cbpa.2017.03.007_bb0190 article-title: Intestinal bicarbonate secretion by marine teleost fish—why and how? publication-title: Biochim. Biophys. Acta doi: 10.1016/S0005-2736(02)00600-4 – volume: 202 start-page: 421 year: 2011 ident: 10.1016/j.cbpa.2017.03.007_bb0050 article-title: Intestinal anion exchange in marine teleosts is involved in osmoregulation and contributes to the oceanic inorganic carbon cycle publication-title: Acta Physiol. doi: 10.1111/j.1748-1716.2010.02241.x – volume: 10 start-page: 547 year: 2016 ident: 10.1016/j.cbpa.2017.03.007_bb0005 article-title: Proteomic profiling of eccrine sweat reveals its potential as a diagnostic biofluid for active tuberculosis publication-title: Proteomics Clin. Appl. doi: 10.1002/prca.201500071 – start-page: 177 year: 2006 ident: 10.1016/j.cbpa.2017.03.007_bb0115 article-title: Ion transport, osmoregulation, and acid-base balance – volume: 108 start-page: 4433 year: 2008 ident: 10.1016/j.cbpa.2017.03.007_bb0035 article-title: Biomineralization: elemental and organic influence in carbonate systems publication-title: Chem. Rev. doi: 10.1021/cr078270o – volume: 323 start-page: 359 year: 2009 ident: 10.1016/j.cbpa.2017.03.007_bb0195 article-title: Contribution of fish to the marine inorganic carbon cycle publication-title: Science doi: 10.1126/science.1157972 – start-page: 49 year: 2012 ident: 10.1016/j.cbpa.2017.03.007_bb0140 article-title: Control of CaCO3 crystal growth by the acidic proteinaceous fraction of calcifying marine organisms: an in vitro study of biomineralization – volume: 27 start-page: 57 year: 2016 ident: 10.1016/j.cbpa.2017.03.007_bb0075 article-title: A shell regeneration assay to identify biomineralization candidate genes in mytilid mussels publication-title: Mar. Genomics doi: 10.1016/j.margen.2016.03.011 – volume: 107 start-page: 342 year: 2007 ident: 10.1016/j.cbpa.2017.03.007_bb0130 article-title: Calcium carbonate formation and dissolution publication-title: Chem. Rev. doi: 10.1021/cr050358j – volume: 70 start-page: 5814 year: 2006 ident: 10.1016/j.cbpa.2017.03.007_bb0125 article-title: Initial responses of carbonate-rich shelf sediments to rising atmospheric pCO2 and “ocean acidification”: role of high Mg-calcites publication-title: Geochim. Cosmochim. Acta doi: 10.1016/j.gca.2006.08.017 – volume: 6 start-page: 34494 year: 2016 ident: 10.1016/j.cbpa.2017.03.007_bb0155 article-title: A proteinaceous organic matrix regulates carbonate mineral production in the marine teleost intestine publication-title: Sci. Rep. doi: 10.1038/srep34494 – volume: 248 start-page: 253 year: 1988 ident: 10.1016/j.cbpa.2017.03.007_bb0030 article-title: Acidic macromolecules associated with the mineral phase of scleractinian coral skeletons publication-title: J. Exp. Zool. doi: 10.1002/jez.1402480302 – volume: 81 start-page: 203 year: 2012 ident: 10.1016/j.cbpa.2017.03.007_bb0080 article-title: The ubiquitin code publication-title: Annu. Rev. Biochem. doi: 10.1146/annurev-biochem-060310-170328 – volume: 107 start-page: 308 year: 2007 ident: 10.1016/j.cbpa.2017.03.007_bb0120 article-title: The marine inorganic carbon cycle publication-title: Chem. Rev. doi: 10.1021/cr0503557 |
SSID | ssj0000414 |
Score | 2.2402918 |
Snippet | The regulatory mechanisms behind the production of CaCO3 in the marine teleost intestine are poorly studied despite being essential for osmoregulation and... The regulatory mechanisms behind the production of CaCO in the marine teleost intestine are poorly studied despite being essential for osmoregulation and... |
SourceID | proquest pubmed crossref elsevier |
SourceType | Aggregation Database Index Database Enrichment Source Publisher |
StartPage | 35 |
SubjectTerms | Animals anion exchange chromatography Batrachoidiformes - metabolism Biomineralization byproducts calcification Calcification assay Calcification, Physiologic calcium carbonate Calcium Carbonate - chemistry Calcium Carbonate - metabolism crystals data collection fish Fish Proteins - metabolism fractionation Intestinal Absorption - physiology intestines Intestines - chemistry Intestines - metabolism Mass spectrometry Opsanus beta Organic matrix Osmoregulation proteins Proteomics Water-Electrolyte Balance - physiology |
Title | Fractionation of the Gulf toadfish intestinal precipitate organic matrix reveals potential functions of individual proteins |
URI | https://dx.doi.org/10.1016/j.cbpa.2017.03.007 https://www.ncbi.nlm.nih.gov/pubmed/28315772 https://www.proquest.com/docview/1879192242 https://www.proquest.com/docview/2000413144 |
Volume | 208 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Nb9NAEB1V7QEuqLR8pNBqkRAXZOLF613nGEUNAUQvUKm31Xq9K4xa22ocCYTEb2dm107FIT2gXJxobK0845334pk3AK-VdPgxNskra4mguKTg0iaztBB5pQqrLHUjf7mQq0vx6Sq_2oPF2AtDZZXD3h_39LBbD79Mh7s57ep6-pWThh41_JDkulSk-CmEoih_9-euzCMVQd-bjBOyHhpnYo2XLTvSHuIqCp2qXclpF_gMSWh5CI8G9MjmcYGPYc81R3A8b5A53_xib1io5wx_lB_Bg8U4y-0Yfi9vYwND8ANrPUPcxz5srvGgNZWv198ZCUfg807X70jygsaJ9I7FsU-W3ZCW_09Gik8Ysaxre6ozQmPKjCF46bL1tr-LBQWIulk_gcvl-bfFKhnGLiQW0UufGFllmNYMUtTKpybjvrDCeCuR-am8FLZyXBrkTSW3bpaXXqVVhrDOCU-vKWfZU9hv2sY9B4Z0yhpiVMZnQthZKXlReiG9QWJUyHQCfLzf2g6a5DQa41qPxWc_NPlIk490mmn00QTebs_poiLHvdb56Eb9T1xpTBn3nvdq9LlGX9FbFNO4drPWNJ4dYTFCm90270PcZUhWJ_AsBsx2rYjneI6c5uQ_V_YCHtK3WK72Evb72407RWDUl2ch8s_gYP7x8-riL890DmA |
linkProvider | Elsevier |
linkToHtml | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV09b9swED2kzpAuRZv0w-kXCxRdCsFiRVHyaBh1nSbx0gTIRlAUiahIJCGWgRT9870jJRcdnKHQYsikQOhOvPeku3cAHzNp8dAmSktjiKDYKOfSRNM4F2mZ5SYzVI18vpLLS_H9Kr3ag_lQC0Nplf3eH_Z0v1v3Zyb93Zy0VTX5wUlDjwp-SHJdZskj2Cd1qnQE-7OT0-Xq74YsvMQ3jY9oQl87E9K8TNGS_BDPgtZptis-7cKfPg4tnsKTHkCyWVjjM9iz9SEczWokz7e_2CfmUzr9u_JDOJgP7dyO4PfiLtQweFOwxjGEfuzb5gZ_NLp01fqakXYEPvJ0_ZZUL6ijSGdZ6Pxk2C3J-d8zEn1Cp2Vt01GqEQ6m4Oj9ly5bbUu8mBeBqOr1c7hcfL2YL6O-80JkEMB0kZZlgpFNI0stXawT7nIjtDMSyV-WFsKUlkuN1Kngxk7TwmVxmSCys8LRl8pp8gJGdVPbV8CQURlNpEq7RAgzLSTPCyek08iNchmPgQ_3W5lelpy6Y9yoIf_spyIbKbKRihOFNhrD5-2cNohyPDg6Hcyo_nEthVHjwXkfBpsrtBV9SNG1bTZrRR3aERkjutk95ov3uwT56hheBofZrhUhHU-R1hz_58rew8Hy4vxMnZ2sTl_DY_onZK-9gVF3t7FvESd1xbv-OfgDBQQREQ |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Fractionation+of+the+Gulf+toadfish+intestinal+precipitate+organic+matrix+reveals+potential+functions+of+individual+proteins&rft.jtitle=Comparative+biochemistry+and+physiology.+Part+A%2C+Molecular+%26+integrative+physiology&rft.au=Schauer%2C+Kevin+L&rft.au=Grosell%2C+Martin&rft.date=2017-06-01&rft.issn=1531-4332&rft.eissn=1531-4332&rft.volume=208&rft.spage=35&rft_id=info:doi/10.1016%2Fj.cbpa.2017.03.007&rft.externalDBID=NO_FULL_TEXT |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1095-6433&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1095-6433&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1095-6433&client=summon |