Human symptoms–disease network

In the post-genomic era, the elucidation of the relationship between the molecular origins of diseases and their resulting phenotypes is a crucial task for medical research. Here, we use a large-scale biomedical literature database to construct a symptom-based human disease network and investigate t...

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Published inNature communications Vol. 5; no. 1; p. 4212
Main Authors Zhou, XueZhong, Menche, Jörg, Barabási, Albert-László, Sharma, Amitabh
Format Journal Article
LanguageEnglish
Published London Nature Publishing Group UK 26.06.2014
Nature Publishing Group
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Abstract In the post-genomic era, the elucidation of the relationship between the molecular origins of diseases and their resulting phenotypes is a crucial task for medical research. Here, we use a large-scale biomedical literature database to construct a symptom-based human disease network and investigate the connection between clinical manifestations of diseases and their underlying molecular interactions. We find that the symptom-based similarity of two diseases correlates strongly with the number of shared genetic associations and the extent to which their associated proteins interact. Moreover, the diversity of the clinical manifestations of a disease can be related to the connectivity patterns of the underlying protein interaction network. The comprehensive, high-quality map of disease–symptom relations can further be used as a resource helping to address important questions in the field of systems medicine, for example, the identification of unexpected associations between diseases, disease etiology research or drug design. Unravelling the relationships between disease symptoms and underlying molecular origins is an important task in biomedical research. Here, Zhou et al. link diseases via their symptom overlap, and show that similar phenotypes are mirrored in networks that connect diseases with common genes or protein interactions.
AbstractList In the post-genomic era, the elucidation of the relationship between the molecular origins of diseases and their resulting phenotypes is a crucial task for medical research. Here, we use a large-scale biomedical literature database to construct a symptom-based human disease network and investigate the connection between clinical manifestations of diseases and their underlying molecular interactions. We find that the symptom-based similarity of two diseases correlates strongly with the number of shared genetic associations and the extent to which their associated proteins interact. Moreover, the diversity of the clinical manifestations of a disease can be related to the connectivity patterns of the underlying protein interaction network. The comprehensive, high-quality map of disease-symptom relations can further be used as a resource helping to address important questions in the field of systems medicine, for example, the identification of unexpected associations between diseases, disease etiology research or drug design.
In the post-genomic era, the elucidation of the relationship between the molecular origins of diseases and their resulting phenotypes is a crucial task for medical research. Here, we use a large-scale biomedical literature database to construct a symptom-based human disease network and investigate the connection between clinical manifestations of diseases and their underlying molecular interactions. We find that the symptom-based similarity of two diseases correlates strongly with the number of shared genetic associations and the extent to which their associated proteins interact. Moreover, the diversity of the clinical manifestations of a disease can be related to the connectivity patterns of the underlying protein interaction network. The comprehensive, high-quality map of disease–symptom relations can further be used as a resource helping to address important questions in the field of systems medicine, for example, the identification of unexpected associations between diseases, disease etiology research or drug design. Unravelling the relationships between disease symptoms and underlying molecular origins is an important task in biomedical research. Here, Zhou et al. link diseases via their symptom overlap, and show that similar phenotypes are mirrored in networks that connect diseases with common genes or protein interactions.
In the post-genomic era, the elucidation of the relationship between the molecular origins of diseases and their resulting phenotypes is a crucial task for medical research. Here, we use a large-scale biomedical literature database to construct a symptom-based human disease network and investigate the connection between clinical manifestations of diseases and their underlying molecular interactions. We find that the symptom-based similarity of two diseases correlates strongly with the number of shared genetic associations and the extent to which their associated proteins interact. Moreover, the diversity of the clinical manifestations of a disease can be related to the connectivity patterns of the underlying protein interaction network. The comprehensive, high-quality map of disease-symptom relations can further be used as a resource helping to address important questions in the field of systems medicine, for example, the identification of unexpected associations between diseases, disease etiology research or drug design.In the post-genomic era, the elucidation of the relationship between the molecular origins of diseases and their resulting phenotypes is a crucial task for medical research. Here, we use a large-scale biomedical literature database to construct a symptom-based human disease network and investigate the connection between clinical manifestations of diseases and their underlying molecular interactions. We find that the symptom-based similarity of two diseases correlates strongly with the number of shared genetic associations and the extent to which their associated proteins interact. Moreover, the diversity of the clinical manifestations of a disease can be related to the connectivity patterns of the underlying protein interaction network. The comprehensive, high-quality map of disease-symptom relations can further be used as a resource helping to address important questions in the field of systems medicine, for example, the identification of unexpected associations between diseases, disease etiology research or drug design.
ArticleNumber 4212
Author Menche, Jörg
Sharma, Amitabh
Zhou, XueZhong
Barabási, Albert-László
Author_xml – sequence: 1
  givenname: XueZhong
  surname: Zhou
  fullname: Zhou, XueZhong
  email: xzzhou@bjtu.edu.cn
  organization: School of Computer and Information Technology and Beijing Key Lab of Traffic Data Analysis and Mining, Beijing Jiaotong University, Northeastern University Physics Department, Center for Complex Network Research, 111 DA/Physics Dept., Center for Cancer Systems Biology, Dana-Farber Cancer Institute
– sequence: 2
  givenname: Jörg
  surname: Menche
  fullname: Menche, Jörg
  organization: Northeastern University Physics Department, Center for Complex Network Research, 111 DA/Physics Dept., Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Department of Theoretical Physics, Budapest University of Technology and Economics
– sequence: 3
  givenname: Albert-László
  surname: Barabási
  fullname: Barabási, Albert-László
  organization: Northeastern University Physics Department, Center for Complex Network Research, 111 DA/Physics Dept., Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Department of Theoretical Physics, Budapest University of Technology and Economics, Center for Network Science, Central European University, Channing Division of Network Medicine, Brigham and Women’s Hospital, Harvard Medical School
– sequence: 4
  givenname: Amitabh
  surname: Sharma
  fullname: Sharma, Amitabh
  email: amitabh.sharma@channing.harvard.edu
  organization: Northeastern University Physics Department, Center for Complex Network Research, 111 DA/Physics Dept., Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Channing Division of Network Medicine, Brigham and Women’s Hospital, Harvard Medical School
BackLink https://www.ncbi.nlm.nih.gov/pubmed/24967666$$D View this record in MEDLINE/PubMed
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Snippet In the post-genomic era, the elucidation of the relationship between the molecular origins of diseases and their resulting phenotypes is a crucial task for...
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Bibliographic records
Cancer
Comorbidity
Disease
Disease - genetics
Genes
Genetic Predisposition to Disease
Genotype & phenotype
Humanities and Social Sciences
Humans
Medical research
Medical Subject Headings-MeSH
Models, Theoretical
multidisciplinary
Phenotype
Physics
Proteins - genetics
Science
Science (multidisciplinary)
Systems Theory
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Title Human symptoms–disease network
URI https://link.springer.com/article/10.1038/ncomms5212
https://www.ncbi.nlm.nih.gov/pubmed/24967666
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Volume 5
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