Co‐occurrence is not evidence of ecological interactions

There is a rich amount of information in co‐occurrence (presence–absence) data that could be used to understand community assembly. This proposition first envisioned by Forbes (1907) and then Diamond (1975) prompted the development of numerous modelling approaches (e.g. null model analysis, co‐occur...

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Published inEcology letters Vol. 23; no. 7; pp. 1050 - 1063
Main Authors Blanchet, F. Guillaume, Cazelles, Kevin, Gravel, Dominique, Jeffers, Elizabeth
Format Journal Article
LanguageEnglish
Published England Blackwell Publishing Ltd 01.07.2020
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Abstract There is a rich amount of information in co‐occurrence (presence–absence) data that could be used to understand community assembly. This proposition first envisioned by Forbes (1907) and then Diamond (1975) prompted the development of numerous modelling approaches (e.g. null model analysis, co‐occurrence networks and, more recently, joint species distribution models). Both theory and experimental evidence support the idea that ecological interactions may affect co‐occurrence, but it remains unclear to what extent the signal of interaction can be captured in observational data. It is now time to step back from the statistical developments and critically assess whether co‐occurrence data are really a proxy for ecological interactions. In this paper, we present a series of arguments based on probability, sampling, food web and coexistence theories supporting that significant spatial associations between species (or lack thereof) is a poor proxy for ecological interactions. We discuss appropriate interpretations of co‐occurrence, along with potential avenues to extract as much information as possible from such data. We present seven arguments highlighting why co‐occurrence data is not, and should never be considered, evidence ecological interaction. These arguments are based on probability, sampling, food web and coexistence theories. We discuss appropriate interpretations of co‐occurrence, along with potential avenues to extract as much information as possible from co‐occurrence data. In addition, we present ideas to better describe, understand and predict ecological interactions.
AbstractList There is a rich amount of information in co‐occurrence (presence–absence) data that could be used to understand community assembly. This proposition first envisioned by Forbes (1907) and then Diamond (1975) prompted the development of numerous modelling approaches (e.g. null model analysis, co‐occurrence networks and, more recently, joint species distribution models). Both theory and experimental evidence support the idea that ecological interactions may affect co‐occurrence, but it remains unclear to what extent the signal of interaction can be captured in observational data. It is now time to step back from the statistical developments and critically assess whether co‐occurrence data are really a proxy for ecological interactions. In this paper, we present a series of arguments based on probability, sampling, food web and coexistence theories supporting that significant spatial associations between species (or lack thereof) is a poor proxy for ecological interactions. We discuss appropriate interpretations of co‐occurrence, along with potential avenues to extract as much information as possible from such data.
There is a rich amount of information in co‐occurrence (presence–absence) data that could be used to understand community assembly. This proposition first envisioned by Forbes (1907) and then Diamond (1975) prompted the development of numerous modelling approaches (e.g. null model analysis, co‐occurrence networks and, more recently, joint species distribution models). Both theory and experimental evidence support the idea that ecological interactions may affect co‐occurrence, but it remains unclear to what extent the signal of interaction can be captured in observational data. It is now time to step back from the statistical developments and critically assess whether co‐occurrence data are really a proxy for ecological interactions. In this paper, we present a series of arguments based on probability, sampling, food web and coexistence theories supporting that significant spatial associations between species (or lack thereof) is a poor proxy for ecological interactions. We discuss appropriate interpretations of co‐occurrence, along with potential avenues to extract as much information as possible from such data. We present seven arguments highlighting why co‐occurrence data is not, and should never be considered, evidence ecological interaction. These arguments are based on probability, sampling, food web and coexistence theories. We discuss appropriate interpretations of co‐occurrence, along with potential avenues to extract as much information as possible from co‐occurrence data. In addition, we present ideas to better describe, understand and predict ecological interactions.
There is a rich amount of information in co-occurrence (presence-absence) data that could be used to understand community assembly. This proposition first envisioned by Forbes (1907) and then Diamond (1975) prompted the development of numerous modelling approaches (e.g. null model analysis, co-occurrence networks and, more recently, joint species distribution models). Both theory and experimental evidence support the idea that ecological interactions may affect co-occurrence, but it remains unclear to what extent the signal of interaction can be captured in observational data. It is now time to step back from the statistical developments and critically assess whether co-occurrence data are really a proxy for ecological interactions. In this paper, we present a series of arguments based on probability, sampling, food web and coexistence theories supporting that significant spatial associations between species (or lack thereof) is a poor proxy for ecological interactions. We discuss appropriate interpretations of co-occurrence, along with potential avenues to extract as much information as possible from such data.There is a rich amount of information in co-occurrence (presence-absence) data that could be used to understand community assembly. This proposition first envisioned by Forbes (1907) and then Diamond (1975) prompted the development of numerous modelling approaches (e.g. null model analysis, co-occurrence networks and, more recently, joint species distribution models). Both theory and experimental evidence support the idea that ecological interactions may affect co-occurrence, but it remains unclear to what extent the signal of interaction can be captured in observational data. It is now time to step back from the statistical developments and critically assess whether co-occurrence data are really a proxy for ecological interactions. In this paper, we present a series of arguments based on probability, sampling, food web and coexistence theories supporting that significant spatial associations between species (or lack thereof) is a poor proxy for ecological interactions. We discuss appropriate interpretations of co-occurrence, along with potential avenues to extract as much information as possible from such data.
Author Jeffers, Elizabeth
Blanchet, F. Guillaume
Gravel, Dominique
Cazelles, Kevin
Author_xml – sequence: 1
  givenname: F. Guillaume
  orcidid: 0000-0001-5149-2488
  surname: Blanchet
  fullname: Blanchet, F. Guillaume
  email: guillaume.blanchet@usherbrooke.ca
  organization: Université de Sherbrooke
– sequence: 2
  givenname: Kevin
  orcidid: 0000-0001-6619-9874
  surname: Cazelles
  fullname: Cazelles, Kevin
  organization: University of Guelph
– sequence: 3
  givenname: Dominique
  orcidid: 0000-0002-4498-7076
  surname: Gravel
  fullname: Gravel, Dominique
  organization: Université de Sherbrooke
– sequence: 4
  givenname: Elizabeth
  surname: Jeffers
  fullname: Jeffers, Elizabeth
BackLink https://www.ncbi.nlm.nih.gov/pubmed/32429003$$D View this record in MEDLINE/PubMed
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Snippet There is a rich amount of information in co‐occurrence (presence–absence) data that could be used to understand community assembly. This proposition first...
There is a rich amount of information in co-occurrence (presence-absence) data that could be used to understand community assembly. This proposition first...
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SubjectTerms Coexistence
Co‐occurrence analysis
co‐occurrence networks
Diamonds
ecological interactions
Food chains
Food webs
Geographical distribution
Information processing
observational studies
presence–absence data
probability
Statistical analysis
statistical inference
Title Co‐occurrence is not evidence of ecological interactions
URI https://onlinelibrary.wiley.com/doi/abs/10.1111%2Fele.13525
https://www.ncbi.nlm.nih.gov/pubmed/32429003
https://www.proquest.com/docview/2409485805
https://www.proquest.com/docview/2405302765
https://www.proquest.com/docview/2551995005
Volume 23
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