Changes in nitrogen functional genes and microbial populations in soil profiles of a peatland under different burning regimes

Microbes in peatlands provide key ecosystem services and are essential for their role in biogeochemical cycling. Prescribed burning is a common aspect of peatland management but the practice has been criticized for being ecologically damaging due to its effect on the biological, chemical and physica...

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Published inApplied soil ecology : a section of Agriculture, ecosystems & environment Vol. 200; p. 105426
Main Authors Allingham, Shaun M., Drake, Samantha J., Ramsey, Andrew, Field, Chris D., Nwaishi, Felix C., Elliott, David R.
Format Journal Article
LanguageEnglish
Published Elsevier B.V 01.08.2024
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Abstract Microbes in peatlands provide key ecosystem services and are essential for their role in biogeochemical cycling. Prescribed burning is a common aspect of peatland management but the practice has been criticized for being ecologically damaging due to its effect on the biological, chemical and physical properties of the soil. It is poorly understood how burning affects soil N cycling and previous studies have focused predominantly on the topsoil whilst giving less attention to changes with soil depth. This study investigated the changes of microbial abundance (bacterial 16S rRNA and fungal 18S rRNA) and the abundance of N-cycle functional genes involved in archaeal and bacterial ammonia oxidation (amoA-AOA and amoA-AOB), denitrification (nirK and nirS), N fixation (nifH) and organic N decomposition (chiA) in soil profiles across three burn treatments on a managed peatland landscape (a ‘non-burn’ since 1954 control, 20 years burn interval, and 10 years burn interval). Our results indicate the abundance of bacterial 16S rRNA and fungal 18 s rRNA was affected by burn treatment, soil depth and their interaction and were greater in the non-burn control plots. The abundances of amoA-AOA, amoA-AOB, and nifH were significantly higher in the topsoil of the non-burn control plots while the abundance of nirK was higher in plots subject to short rotation and long rotation burn regimes but also decreased significantly with soil depth. The abundance of nirS was not affected by burn treatment or soil depth. ChiA abundance was affected by burn treatment, soil depth and their interaction. N-cycle functional gene abundance responded differently to environmental factors associated with prescribed burning and varied with soil depth. These findings suggest that the practice of burning affects microbial N turnover potential and provides an important insight into the soil N-cycling potential of peatlands under different burning regimes. •Burn treatment, soil depth and their interaction affected bacterial and fungal abundance.•N cycling genes exhibited diverse responses to burning regimes and soil depths.•Associations were found between gene abundances and environmental factors.•Microbial communities demonstrated adaptability to changes in burning regimes.
AbstractList Microbes in peatlands provide key ecosystem services and are essential for their role in biogeochemical cycling. Prescribed burning is a common aspect of peatland management but the practice has been criticized for being ecologically damaging due to its effect on the biological, chemical and physical properties of the soil. It is poorly understood how burning affects soil N cycling and previous studies have focused predominantly on the topsoil whilst giving less attention to changes with soil depth. This study investigated the changes of microbial abundance (bacterial 16S rRNA and fungal 18S rRNA) and the abundance of N-cycle functional genes involved in archaeal and bacterial ammonia oxidation (amoA-AOA and amoA-AOB), denitrification (nirK and nirS), N fixation (nifH) and organic N decomposition (chiA) in soil profiles across three burn treatments on a managed peatland landscape (a ‘non-burn’ since 1954 control, 20 years burn interval, and 10 years burn interval). Our results indicate the abundance of bacterial 16S rRNA and fungal 18 s rRNA was affected by burn treatment, soil depth and their interaction and were greater in the non-burn control plots. The abundances of amoA-AOA, amoA-AOB, and nifH were significantly higher in the topsoil of the non-burn control plots while the abundance of nirK was higher in plots subject to short rotation and long rotation burn regimes but also decreased significantly with soil depth. The abundance of nirS was not affected by burn treatment or soil depth. ChiA abundance was affected by burn treatment, soil depth and their interaction. N-cycle functional gene abundance responded differently to environmental factors associated with prescribed burning and varied with soil depth. These findings suggest that the practice of burning affects microbial N turnover potential and provides an important insight into the soil N-cycling potential of peatlands under different burning regimes.
Microbes in peatlands provide key ecosystem services and are essential for their role in biogeochemical cycling. Prescribed burning is a common aspect of peatland management but the practice has been criticized for being ecologically damaging due to its effect on the biological, chemical and physical properties of the soil. It is poorly understood how burning affects soil N cycling and previous studies have focused predominantly on the topsoil whilst giving less attention to changes with soil depth. This study investigated the changes of microbial abundance (bacterial 16S rRNA and fungal 18S rRNA) and the abundance of N-cycle functional genes involved in archaeal and bacterial ammonia oxidation (amoA-AOA and amoA-AOB), denitrification (nirK and nirS), N fixation (nifH) and organic N decomposition (chiA) in soil profiles across three burn treatments on a managed peatland landscape (a ‘non-burn’ since 1954 control, 20 years burn interval, and 10 years burn interval). Our results indicate the abundance of bacterial 16S rRNA and fungal 18 s rRNA was affected by burn treatment, soil depth and their interaction and were greater in the non-burn control plots. The abundances of amoA-AOA, amoA-AOB, and nifH were significantly higher in the topsoil of the non-burn control plots while the abundance of nirK was higher in plots subject to short rotation and long rotation burn regimes but also decreased significantly with soil depth. The abundance of nirS was not affected by burn treatment or soil depth. ChiA abundance was affected by burn treatment, soil depth and their interaction. N-cycle functional gene abundance responded differently to environmental factors associated with prescribed burning and varied with soil depth. These findings suggest that the practice of burning affects microbial N turnover potential and provides an important insight into the soil N-cycling potential of peatlands under different burning regimes. •Burn treatment, soil depth and their interaction affected bacterial and fungal abundance.•N cycling genes exhibited diverse responses to burning regimes and soil depths.•Associations were found between gene abundances and environmental factors.•Microbial communities demonstrated adaptability to changes in burning regimes.
ArticleNumber 105426
Author Nwaishi, Felix C.
Allingham, Shaun M.
Field, Chris D.
Elliott, David R.
Drake, Samantha J.
Ramsey, Andrew
Author_xml – sequence: 1
  givenname: Shaun M.
  surname: Allingham
  fullname: Allingham, Shaun M.
  email: shaun.allingham@nottingham.ac.uk
  organization: School of Biosciences, The University of Nottingham, Sutton Bonington, Loughborough LE12 5RD, UK
– sequence: 2
  givenname: Samantha J.
  surname: Drake
  fullname: Drake, Samantha J.
  organization: Nature-based Solutions Research Centre, University of Derby, Derby DE22 1GB, UK
– sequence: 3
  givenname: Andrew
  surname: Ramsey
  fullname: Ramsey, Andrew
  organization: Buglife Scotland, Unit 4, Beta Centre, Stirling University, Innovation Park, Stirling FK9 4NF, UK
– sequence: 4
  givenname: Chris D.
  surname: Field
  fullname: Field, Chris D.
  organization: Department of Natural Sciences, Manchester Metropolitan University, Chester Street, Manchester M1 5GD, UK
– sequence: 5
  givenname: Felix C.
  surname: Nwaishi
  fullname: Nwaishi, Felix C.
  organization: Department of Earth and Environmental Sciences, Mount Royal University, 4825 Mt Royal Gate SW, Calgary, AB T3E 6K6, Canada
– sequence: 6
  givenname: David R.
  surname: Elliott
  fullname: Elliott, David R.
  organization: Nature-based Solutions Research Centre, University of Derby, Derby DE22 1GB, UK
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Keywords N cycling
Prescribed burning
N functioning genes
Biogeochemical cycling
Peatlands
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SSID ssj0005283
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Snippet Microbes in peatlands provide key ecosystem services and are essential for their role in biogeochemical cycling. Prescribed burning is a common aspect of...
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SubjectTerms ammonia
Archaea
Biogeochemical cycling
denitrification
ecosystems
fungi
genes
landscapes
N cycling
N functioning genes
nitrogen
nitrogen cycle
nitrogen fixation
oxidation
Peatlands
Prescribed burning
Salvia hispanica
soil depth
soil ecology
topsoil
Title Changes in nitrogen functional genes and microbial populations in soil profiles of a peatland under different burning regimes
URI https://dx.doi.org/10.1016/j.apsoil.2024.105426
https://www.proquest.com/docview/3206216944
Volume 200
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