The baseline is already shifted: marine microbiome restoration and rehabilitation as essential tools to mitigate ecosystem decline

Climate change is turning formerly pristine ecosystems into ever-changing states, causing major disturbance and biodiversity loss. Such impacted marine ecosystems and organisms exhibit clear microbiome shifts that alter their function. Microbiome-targeted interventions appear as feasible tools to su...

Full description

Saved in:
Bibliographic Details
Published inFrontiers in Marine Science Vol. 10
Main Authors Peixoto, Raquel S., Voolstra, Christian R.
Format Journal Article
LanguageEnglish
Published Lausanne Frontiers Research Foundation 30.06.2023
Frontiers Media S.A
Subjects
Anthropogenic factors
anthropogenic impacts
Biodiversity
Climate change
Coral reefs
Disease
Ecosystem resilience
Ecosystems
Environmental conditions
Environmental impact
Marine conservation
Marine ecosystems
microbial therapy
microbiome restoration
Microbiomes
Organisms
Pathogens
Probiotics
R&D
Rehabilitation
Research & development
Restoration
Symbionts
Wildlife conservation
Online AccessGet full text

Cover

Abstract Climate change is turning formerly pristine ecosystems into ever-changing states, causing major disturbance and biodiversity loss. Such impacted marine ecosystems and organisms exhibit clear microbiome shifts that alter their function. Microbiome-targeted interventions appear as feasible tools to support organismal and ecosystem resilience and recovery by restoring symbiotic interactions and thwarting dysbiotic processes. However, microbiome restoration and rehabilitation are perceived as drastic measures, since they alter ‘natural relationships’. What is missing from this notion is that microbiomes already drastically differ from any pre-anthropogenic state. As such, our perception and definition of even ‘pristine states’ may in fact represent an already disturbed/derived condition. Following this, we argue that restoring and rehabilitating marine microbiomes are essential tools to mitigate ecosystem and organismal decline.
AbstractList Climate change is turning formerly pristine ecosystems into ever-changing states, causing major disturbance and biodiversity loss. Such impacted marine ecosystems and organisms exhibit clear microbiome shifts that alter their function. Microbiome-targeted interventions appear as feasible tools to support organismal and ecosystem resilience by restoring symbiotic interactions and thwarting dysbiotic processes. However, microbiome restoration and rehabilitation are perceived as drastic measures, since they alter ‘natural relationships’. However, what is missing from this notion is that microbiomes already drastically differ from any pre-anthropogenic state. As such, our perception and definition of even ‘pristine states’ may in fact represent an already disturbed/derived condition. Thus, we argue that rehabilitating marine microbiomes is a necessary means to mitigate ecosystem and organismal decline.
Climate change is turning formerly pristine ecosystems into ever-changing states, causing major disturbance and biodiversity loss. Such impacted marine ecosystems and organisms exhibit clear microbiome shifts that alter their function. Microbiome-targeted interventions appear as feasible tools to support organismal and ecosystem resilience and recovery by restoring symbiotic interactions and thwarting dysbiotic processes. However, microbiome restoration and rehabilitation are perceived as drastic measures, since they alter ‘natural relationships’. What is missing from this notion is that microbiomes already drastically differ from any pre-anthropogenic state. As such, our perception and definition of even ‘pristine states’ may in fact represent an already disturbed/derived condition. Following this, we argue that restoring and rehabilitating marine microbiomes are essential tools to mitigate ecosystem and organismal decline.
Author Peixoto, Raquel S.
Voolstra, Christian R.
Author_xml – sequence: 1
  givenname: Raquel S.
  surname: Peixoto
  fullname: Peixoto, Raquel S.
– sequence: 2
  givenname: Christian R.
  surname: Voolstra
  fullname: Voolstra, Christian R.
BookMark eNpNUU1PHDEMjSqQytcf6ClSz7vN50zSW4WAIiFxgXPkSTxsVrMTmoTDXvvLybArxMV2bOfZfu-cnMxpRkJ-cLaW0thf4w5yWQsm5JoLbrTk38iZELZb9b3SJ1_i7-SqlC1jjEvFtLJn5P_TBukABac4I42FwpQRwp6WTRwrht-0gS-lXfQ5DTHtkGYsNWWoMc0U5tDeGxjiFOsxVSiWgnONMNGa0lSabf9rfIGKFH0q-1JxRwP6ZeolOR1hKnh19Bfk-fbm6frv6uHx7v76z8PKS6PryvK-81p7KbSSJozMWN8ZoXslu9EMEAYLRhoBgSnG7QjcD4KPNjChO625vCD3B9yQYOtec2yX7V2C6D4SKb84yDX6CZ1VXljDZOdVr0LPGqcKjOp0GIZOSmhYPw9Yrzn9e2t8uG16y3Nb3wkjORcLv61LHLoadaVkHD-ncuYW6dyHdG6Rzh2lk-9Ai4-y
CitedBy_id crossref_primary_10_1016_j_tim_2023_08_012
crossref_primary_10_1007_s00343_024_3159_0
crossref_primary_10_1038_s42003_024_06135_3
crossref_primary_10_1093_bioinformatics_btad749
crossref_primary_10_1038_s41598_024_65152_8
crossref_primary_10_1038_s41579_024_01015_3
crossref_primary_10_3389_fmars_2023_1245218
crossref_primary_10_1038_s44185_023_00020_8
crossref_primary_10_1007_s00338_024_02504_w
crossref_primary_10_2903_sp_efsa_2024_EN_8602
crossref_primary_10_3389_fmars_2023_1212690
Cites_doi 10.1038/s41575-019-0173-3
10.53642/NRKY9386
10.3354/meps11554
10.1002/fee.1794
10.1126/sciadv.abg3088
10.1038/s41396-019-0541-6
10.3389/fmicb.2022.830905
10.3389/fmicb.2021.650610
10.1371/journal.pbio.3000533
10.1007/s00253-015-6919-0
10.1126/science.aaz3834
10.1038/s41598-019-45453-z
10.1007/s13280-011-0185-x
10.3390/microorganisms9112181
10.1371/journal.pcbi.1003050
10.1128/mbio.00800-22
10.1126/science.285.5433.1505
10.1016/j.zool.2011.04.001
10.1073/pnas.1218525110
10.3389/fmars.2019.00406
10.3389/fmicb.2016.00991
10.1038/s41579-019-0222-5
10.1038/s41396-018-0323-6
10.1006/ecss.1997.0283
10.1371/journal.pone.0087101
10.1038/nmicrobiol.2016.42
10.1016/j.biocon.2021.109107
10.3389/fmars.2017.00009
10.3389/fmicb.2017.00341
10.1371/journal.pone.0043996
10.1007/s00248-017-1014-y
10.1038/s43017-021-00214-3
10.3354/esr003205
10.1073/pnas.1719685115
10.1146/annurev-animal-090120-115444
10.1007/s00248-019-01385-9
10.1111/cmi.12308
10.15252/embr.202356826
10.1038/s41564-022-01228-3
10.1093/femsec/fiz127
10.1186/s40168-020-00875-0
10.1128/Spectrum.00859-21
10.1016/j.envpol.2022.119414
10.1016/j.oneear.2021.08.016
10.1371/journal.ppat.1009503
10.3897/rethinkingecology.6.56285
10.1186/1471-2180-12-170
10.3389/fmicb.2020.610009
10.1073/pnas.0611525104
10.3389/fmicb.2018.00833
10.1186/s12915-014-0069-1
10.1371/journal.pone.0225248
10.3389/fpubh.2018.00235
10.1016/j.phanu.2015.09.003
10.1128/mSystems.00658-20
10.1038/s41587-019-0260-6
10.1111/jam.14766
10.3390/w13040406
10.1038/s41564-022-01173-1
10.1007/s00531-008-0364-6
10.1186/s40168-021-01224-5
10.1016/j.ijmm.2018.05.002
10.1890/09-0761.1
10.1071/MA20025
10.3390/microorganisms8111682
10.3389/fmars.2019.00686/full
10.3390/ijms20194673
10.3390/microorganisms9112235
10.3389/fmars.2020.00179
10.1126/science.1059199
10.1002/lol2.10274
10.1007/s12275-011-0528-0
10.1186/s12915-015-0127-3
10.1371/journal.pone.0192772
ContentType Journal Article
Copyright 2023. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
Copyright_xml – notice: 2023. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
DBID AAYXX
CITATION
3V.
7TN
7XB
88I
8FE
8FH
8FK
ABUWG
AFKRA
AZQEC
BBNVY
BENPR
BHPHI
BKSAR
CCPQU
DWQXO
F1W
GNUQQ
HCIFZ
LK8
M2P
M7P
PCBAR
PIMPY
PQEST
PQQKQ
PQUKI
PRINS
Q9U
DOA
DOI 10.3389/fmars.2023.1218531
DatabaseName CrossRef
ProQuest Central (Corporate)
Oceanic Abstracts
ProQuest Central (purchase pre-March 2016)
Science Database (Alumni Edition)
ProQuest SciTech Collection
ProQuest Natural Science Collection
ProQuest Central (Alumni) (purchase pre-March 2016)
ProQuest Central (Alumni)
ProQuest Central UK/Ireland
ProQuest Central Essentials
Biological Science Collection
ProQuest Central
ProQuest Natural Science Collection
ProQuest Earth, Atmospheric & Aquatic Science
ProQuest One Community College
ProQuest Central
ASFA: Aquatic Sciences and Fisheries Abstracts
ProQuest Central Student
SciTech Premium Collection (Proquest) (PQ_SDU_P3)
Biological Sciences
ProQuest Science Journals
Biological Science Database
ProQuest Earth, Atmospheric & Aquatic Science Database
Publicly Available Content Database
ProQuest One Academic Eastern Edition (DO NOT USE)
ProQuest One Academic
ProQuest One Academic UKI Edition
ProQuest Central China
ProQuest Central Basic
Directory of Open Access Journals
DatabaseTitle CrossRef
Publicly Available Content Database
ProQuest Central Student
ProQuest Central Essentials
ProQuest Central (Alumni Edition)
SciTech Premium Collection
ProQuest One Community College
ProQuest Natural Science Collection
ProQuest Central China
ProQuest Central
Earth, Atmospheric & Aquatic Science Collection
Oceanic Abstracts
Natural Science Collection
ProQuest Central Korea
Biological Science Collection
ProQuest Science Journals (Alumni Edition)
ProQuest Biological Science Collection
ProQuest Central Basic
ProQuest Science Journals
ProQuest One Academic Eastern Edition
Earth, Atmospheric & Aquatic Science Database
Biological Science Database
ProQuest SciTech Collection
ProQuest One Academic UKI Edition
ASFA: Aquatic Sciences and Fisheries Abstracts
ProQuest One Academic
ProQuest Central (Alumni)
DatabaseTitleList Publicly Available Content Database
CrossRef
Database_xml – sequence: 1
  dbid: DOA
  name: Directory of Open Access Journals
  url: https://www.doaj.org/
  sourceTypes: Open Website
– sequence: 2
  dbid: BENPR
  name: ProQuest Central
  url: https://www.proquest.com/central
  sourceTypes: Aggregation Database
DeliveryMethod fulltext_linktorsrc
Discipline Oceanography
EISSN 2296-7745
ExternalDocumentID oai_doaj_org_article_94c298036c474d708534a8465dbb633a
10_3389_fmars_2023_1218531
GroupedDBID 5VS
88I
8FE
8FH
9T4
AAFWJ
AAYXX
ABUWG
ACGFS
ACXDI
ADBBV
AFKRA
AFPKN
ALMA_UNASSIGNED_HOLDINGS
AZQEC
BBNVY
BCNDV
BENPR
BHPHI
BKSAR
BPHCQ
CCPQU
CITATION
DWQXO
FRP
GNUQQ
GROUPED_DOAJ
HCIFZ
IAO
IEA
IGS
KQ8
LK8
M2P
M7P
M~E
OK1
PCBAR
PIMPY
PQQKQ
PROAC
3V.
7TN
7XB
8FK
F1W
PQEST
PQUKI
PRINS
Q9U
ID FETCH-LOGICAL-c385t-9176c55c325438df089c68257436f8badb9a8382ad04019fa1cb21f9d02565513
IEDL.DBID DOA
ISSN 2296-7745
IngestDate Tue Oct 22 15:16:20 EDT 2024
Thu Oct 10 16:43:47 EDT 2024
Thu Sep 26 18:07:47 EDT 2024
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Language English
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c385t-9176c55c325438df089c68257436f8badb9a8382ad04019fa1cb21f9d02565513
OpenAccessLink https://doaj.org/article/94c298036c474d708534a8465dbb633a
PQID 2831123405
PQPubID 2049538
ParticipantIDs doaj_primary_oai_doaj_org_article_94c298036c474d708534a8465dbb633a
proquest_journals_2831123405
crossref_primary_10_3389_fmars_2023_1218531
PublicationCentury 2000
PublicationDate 2023-06-30
PublicationDateYYYYMMDD 2023-06-30
PublicationDate_xml – month: 06
  year: 2023
  text: 2023-06-30
  day: 30
PublicationDecade 2020
PublicationPlace Lausanne
PublicationPlace_xml – name: Lausanne
PublicationTitle Frontiers in Marine Science
PublicationYear 2023
Publisher Frontiers Research Foundation
Frontiers Media S.A
Publisher_xml – name: Frontiers Research Foundation
– name: Frontiers Media S.A
References Rosado (B56) 2019; 13
Nave (B46) 2018; 115
Daisley (B16) 2020; 14
Wegh (B71) 2019; 20
Jaffe (B35) 2019; 14
Eddy (B23) 2021; 4
Nnadi (B47) 2021; 17
Voolstra (B70) 2021; 2
Soniat (B60) 2009; 98
do Carmo (B20) 2011; 49
Conte (B13) 2021; 13
Liu (B40) 2021; 9
van den Nieuwboer (B66) 2016; 4
Egan (B24) 2016; 7
Woodhams (B74) 2020; 79
Cavicchioli (B11) 2019; 17
Filbee-Dexter (B26) 2016; 543
Hoyt (B33) 2019; 9
Soga (B59) 2018; 16
Blackall (B7) 2020; 41
Lozupone (B42) 2007; 104
Steffen (B61) 2011; 40
Küng (B38) 2014; 9
Petersen (B52) 2014; 16
Sweet (B62) 2017; 4
Trinh (B64) 2018; 6
Averill (B3) 2022; 7
Wilkins (B73) 2019; 17
Leite (B39) 2018; 9
Bosch (B9) 2011; 114
Epstein (B25) 2010; 91
Weinbauer (B72) 2007; 3
Haas (B30) 2016; 1
Gilbert (B29) 2014; 12
McFall-Ngai (B43) 2013; 110
Sanders (B57) 2019; 16
D’Alvise (B18) 2012; 7
Fonseca (B28) 2018; 75
Berg (B4) 2022; 10
Berg (B6) 2020; 8
de Jesus (B19) 2015; 99
Daliri (B17) 2018; 308
Berg (B5) 2021; 12
Hewson (B32) 2019; 6
Finlay (B27) 2020; 367
Dyke (B22) 2013; 9
Vilela (B67) 2022; 307
Peixoto (B50) 2021; 9
Santoro (B58) 2021; 7
Boilard (B8) 2020; 8
Minich (B44) 2018; 13
Bziuk (B10) 2022; 1748
Kleypas (B36) 2021; 257
Voolstra (B69) 2023; 24
Tiedje (B63) 2022; 13
Peixoto (B49) 2019; 6
Vilela (B68) 2021; 9
Allard (B1) 2020; 5
Precht (B53) 2021; 6
Robert (B55) 2015; 13
Tye (B65) 2022; 7
Lopez (B41) 2019; 95
Rachid (B54) 2012; 12
Duarte (B21) 2020; 7
Peixoto (B51) 2022; 7
Harvell (B31) 1999; 285
Clark (B12) 2021; 9
Cook (B14) 1998; 46
Peixoto (B48) 2017; 8
Knowlton (B37) 2021
Aquino (B2) 2020; 11
Jackson (B34) 2001; 293
Cross (B15) 2019; 37
Modolon (B45) 2020; 129
References_xml – volume: 16
  start-page: 605
  year: 2019
  ident: B57
  article-title: Probiotics and prebiotics in intestinal health and disease: from biology to the clinic
  publication-title: Nat. Rev. Gastroenterol. Hepatol.
  doi: 10.1038/s41575-019-0173-3
  contributor:
    fullname: Sanders
– volume-title: Rebuilding coral reefs: a decadal grand challenge
  year: 2021
  ident: B37
  article-title: “Rebuilding coral reefs: a decadal grand challenge,”
  doi: 10.53642/NRKY9386
  contributor:
    fullname: Knowlton
– volume: 543
  start-page: 141
  year: 2016
  ident: B26
  article-title: Large-Scale degradation of a kelp ecosystem in an ocean warming hotspot
  publication-title: Mar. Ecol. Prog. Ser.
  doi: 10.3354/meps11554
  contributor:
    fullname: Filbee-Dexter
– volume: 16
  start-page: 222
  year: 2018
  ident: B59
  article-title: Shifting baseline syndrome: causes, consequences, and implications
  publication-title: Front. Ecol. Environ.
  doi: 10.1002/fee.1794
  contributor:
    fullname: Soga
– volume: 7
  start-page: eabg3088
  year: 2021
  ident: B58
  article-title: Coral microbiome manipulation elicits metabolic and genetic restructuring to mitigate heat stress and evade mortality
  publication-title: Sci. Adv.
  doi: 10.1126/sciadv.abg3088
  contributor:
    fullname: Santoro
– volume: 14
  start-page: 476
  year: 2020
  ident: B16
  article-title: Novel probiotic approach to counter paenibacillus larvae infection in honey bees
  publication-title: ISME J.
  doi: 10.1038/s41396-019-0541-6
  contributor:
    fullname: Daisley
– volume: 1748
  year: 2022
  ident: B10
  article-title: Barley rhizosphere microbiome transplantation–a strategy to decrease susceptibility of barley grown in soils with low microbial diversity to powdery mildew
  publication-title: Front. Microbiol.
  doi: 10.3389/fmicb.2022.830905
  contributor:
    fullname: Bziuk
– volume: 12
  year: 2021
  ident: B5
  article-title: Microbiome modulation-toward a better understanding of plant microbiome response to microbial inoculants
  publication-title: Front. Microbiol.
  doi: 10.3389/fmicb.2021.650610
  contributor:
    fullname: Berg
– volume: 17
  year: 2019
  ident: B73
  article-title: Host-associated microbiomes drive structure and function of marine ecosystems
  publication-title: PloS Biol.
  doi: 10.1371/journal.pbio.3000533
  contributor:
    fullname: Wilkins
– volume: 99
  start-page: 10815
  year: 2015
  ident: B19
  article-title: Evaluation of soil bioremediation techniques in an aged diesel spill at the Antarctic peninsula
  publication-title: Appl. Microbiol. Biotechnol.
  doi: 10.1007/s00253-015-6919-0
  contributor:
    fullname: de Jesus
– volume: 367
  start-page: 250
  year: 2020
  ident: B27
  article-title: Are noncommunicable diseases communicable
  publication-title: Science
  doi: 10.1126/science.aaz3834
  contributor:
    fullname: Finlay
– volume: 9
  start-page: 9158
  year: 2019
  ident: B33
  article-title: Field trial of a probiotic bacteria to protect bats from white-nose syndrome
  publication-title: Sci. Rep.
  doi: 10.1038/s41598-019-45453-z
  contributor:
    fullname: Hoyt
– volume: 40
  start-page: 739
  year: 2011
  ident: B61
  article-title: The anthropocene: from global change to planetary stewardship
  publication-title: Ambio
  doi: 10.1007/s13280-011-0185-x
  contributor:
    fullname: Steffen
– volume: 9
  year: 2021
  ident: B12
  article-title: Characterization of the microbiome of corals with stony coral tissue loss disease along florida’s coral reef
  publication-title: Microorganisms
  doi: 10.3390/microorganisms9112181
  contributor:
    fullname: Clark
– volume: 9
  year: 2013
  ident: B22
  article-title: The emergence of environmental homeostasis in complex ecosystems
  publication-title: PloS Comput. Biol.
  doi: 10.1371/journal.pcbi.1003050
  contributor:
    fullname: Dyke
– volume: 13
  year: 2022
  ident: B63
  article-title: Microbes and climate change: a research prospectus for the future
  publication-title: MBio
  doi: 10.1128/mbio.00800-22
  contributor:
    fullname: Tiedje
– volume: 285
  start-page: 1505
  year: 1999
  ident: B31
  article-title: Emerging marine diseases–climate links and anthropogenic factors
  publication-title: Science
  doi: 10.1126/science.285.5433.1505
  contributor:
    fullname: Harvell
– volume: 114
  start-page: 185
  year: 2011
  ident: B9
  article-title: Metaorganisms as the new frontier
  publication-title: Zoology
  doi: 10.1016/j.zool.2011.04.001
  contributor:
    fullname: Bosch
– volume: 110
  start-page: 3229
  year: 2013
  ident: B43
  article-title: Animals in a bacterial world, a new imperative for the life sciences
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.1218525110
  contributor:
    fullname: McFall-Ngai
– volume: 6
  year: 2019
  ident: B32
  article-title: Perspective: something old, something new? review of wasting and other mortality in asteroidea (Echinodermata)
  publication-title: Front. Mar. Sci.
  doi: 10.3389/fmars.2019.00406
  contributor:
    fullname: Hewson
– volume: 7
  year: 2016
  ident: B24
  article-title: Microbial dysbiosis: rethinking disease in marine ecosystems
  publication-title: Front. Microbiol.
  doi: 10.3389/fmicb.2016.00991
  contributor:
    fullname: Egan
– volume: 17
  start-page: 569
  year: 2019
  ident: B11
  article-title: Scientists’ warning to humanity: microorganisms and climate change
  publication-title: Nat. Rev. Microbiol.
  doi: 10.1038/s41579-019-0222-5
  contributor:
    fullname: Cavicchioli
– volume: 13
  start-page: 921
  year: 2019
  ident: B56
  article-title: Marine probiotics: increasing coral resistance to bleaching through microbiome manipulation
  publication-title: ISME J.
  doi: 10.1038/s41396-018-0323-6
  contributor:
    fullname: Rosado
– volume: 46
  start-page: 587
  year: 1998
  ident: B14
  article-title: The relationship between increasing Sea-surface temperature and the northward spread ofPerkinsus marinus(Dermo) disease epizootics in oysters
  publication-title: Estuar. Coast. Shelf Sci.
  doi: 10.1006/ecss.1997.0283
  contributor:
    fullname: Cook
– volume: 9
  year: 2014
  ident: B38
  article-title: Stability of microbiota facilitated by host immune regulation: informing probiotic strategies to manage amphibian disease
  publication-title: PloS One
  doi: 10.1371/journal.pone.0087101
  contributor:
    fullname: Küng
– volume: 1
  start-page: 16042
  year: 2016
  ident: B30
  article-title: Global microbialization of coral reefs
  publication-title: Nat. Microbiol.
  doi: 10.1038/nmicrobiol.2016.42
  contributor:
    fullname: Haas
– volume: 257
  start-page: 109107
  year: 2021
  ident: B36
  article-title: Designing a blueprint for coral reef survival
  publication-title: Biol. Conserv.
  doi: 10.1016/j.biocon.2021.109107
  contributor:
    fullname: Kleypas
– volume: 4
  year: 2017
  ident: B62
  article-title: On the importance of the microbiome and pathobiome in coral health and disease
  publication-title: Front. Mar. Sci.
  doi: 10.3389/fmars.2017.00009
  contributor:
    fullname: Sweet
– volume: 8
  year: 2017
  ident: B48
  article-title: Beneficial microorganisms for corals (BMC): proposed mechanisms for coral health and resilience
  publication-title: Front. Microbiol.
  doi: 10.3389/fmicb.2017.00341
  contributor:
    fullname: Peixoto
– volume: 7
  year: 2012
  ident: B18
  article-title: Phaeobacter gallaeciensis reduces vibrio anguillarum in cultures of microalgae and rotifers, and prevents vibriosis in cod larvae
  publication-title: PloS One
  doi: 10.1371/journal.pone.0043996
  contributor:
    fullname: D’Alvise
– volume: 75
  start-page: 183
  year: 2018
  ident: B28
  article-title: The microbiome of eucalyptus roots under different management conditions and its potential for biological nitrogen fixation
  publication-title: Microb. Ecol.
  doi: 10.1007/s00248-017-1014-y
  contributor:
    fullname: Fonseca
– volume: 2
  year: 2021
  ident: B70
  article-title: Extending the natural adaptive capacity of coral holobionts
  publication-title: Nat. Rev. Earth Environ.
  doi: 10.1038/s43017-021-00214-3
  contributor:
    fullname: Voolstra
– volume: 3
  start-page: 205
  year: 2007
  ident: B72
  article-title: REVIEW: extinction of microbes: evidence and potential consequences
  publication-title: Endanger. Species Res.
  doi: 10.3354/esr003205
  contributor:
    fullname: Weinbauer
– volume: 115
  start-page: 2776
  year: 2018
  ident: B46
  article-title: Reforestation can sequester two petagrams of carbon in US topsoils in a century
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
  doi: 10.1073/pnas.1719685115
  contributor:
    fullname: Nave
– volume: 9
  start-page: 265
  year: 2021
  ident: B50
  article-title: Coral probiotics: premise, promise, prospects
  publication-title: Annu. Rev. Anim. Biosci.
  doi: 10.1146/annurev-animal-090120-115444
  contributor:
    fullname: Peixoto
– volume: 79
  start-page: 192
  year: 2020
  ident: B74
  article-title: Probiotics modulate a novel amphibian skin defense peptide that is antifungal and facilitates growth of antifungal bacteria
  publication-title: Microb. Ecol.
  doi: 10.1007/s00248-019-01385-9
  contributor:
    fullname: Woodhams
– volume: 16
  start-page: 1024
  year: 2014
  ident: B52
  article-title: Defining dysbiosis and its influence on host immunity and disease
  publication-title: Cell. Microbiol.
  doi: 10.1111/cmi.12308
  contributor:
    fullname: Petersen
– volume: 24
  year: 2023
  ident: B69
  article-title: Mitigating the ecological collapse of coral reef ecosystems: effective strategies to preserve coral reef ecosystems: effective strategies to preserve coral reef ecosystems
  publication-title: EMBO Rep.
  doi: 10.15252/embr.202356826
  contributor:
    fullname: Voolstra
– volume: 7
  start-page: 1717
  year: 2022
  ident: B3
  article-title: Defending earth’s terrestrial microbiome
  publication-title: Nat. Microbiol.
  doi: 10.1038/s41564-022-01228-3
  contributor:
    fullname: Averill
– volume: 95
  year: 2019
  ident: B41
  article-title: Inevitable future: space colonization beyond earth with microbes first
  publication-title: FEMS Microbiol. Ecol.
  doi: 10.1093/femsec/fiz127
  contributor:
    fullname: Lopez
– volume: 8
  start-page: 103
  year: 2020
  ident: B6
  article-title: Microbiome definition re-visited: old concepts and new challenges
  publication-title: Microbiome
  doi: 10.1186/s40168-020-00875-0
  contributor:
    fullname: Berg
– volume: 9
  year: 2021
  ident: B40
  article-title: Adjunctive probiotics alleviates asthmatic symptoms via modulating the gut microbiome and serum metabolome
  publication-title: Microbiol. Spectr.
  doi: 10.1128/Spectrum.00859-21
  contributor:
    fullname: Liu
– volume: 307
  year: 2022
  ident: B67
  article-title: Global qualitative and quantitative distribution of micropollutants in the deep sea
  publication-title: Environ. Pollut.
  doi: 10.1016/j.envpol.2022.119414
  contributor:
    fullname: Vilela
– volume: 4
  start-page: 1278
  year: 2021
  ident: B23
  article-title: Global decline in capacity of coral reefs to provide ecosystem services
  publication-title: One Earth
  doi: 10.1016/j.oneear.2021.08.016
  contributor:
    fullname: Eddy
– volume: 17
  year: 2021
  ident: B47
  article-title: Climate change and the emergence of fungal pathogens
  publication-title: PloS Pathog.
  doi: 10.1371/journal.ppat.1009503
  contributor:
    fullname: Nnadi
– volume: 6
  start-page: 1
  year: 2021
  ident: B53
  article-title: Failure to respond to a coral disease epizootic in Florida: causes and consequences
  publication-title: Rethink. Ecol.
  doi: 10.3897/rethinkingecology.6.56285
  contributor:
    fullname: Precht
– volume: 12
  start-page: 170
  year: 2012
  ident: B54
  article-title: Physical-chemical and microbiological changes in cerrado soil under differing sugarcane harvest management systems
  publication-title: BMC Microbiol.
  doi: 10.1186/1471-2180-12-170
  contributor:
    fullname: Rachid
– volume: 11
  year: 2020
  ident: B2
  article-title: Evidence that microorganisms at the animal-water interface drive Sea star wasting disease
  publication-title: Front. Microbiol.
  doi: 10.3389/fmicb.2020.610009
  contributor:
    fullname: Aquino
– volume: 104
  start-page: 11436
  year: 2007
  ident: B42
  article-title: Global patterns in bacterial diversity
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.0611525104
  contributor:
    fullname: Lozupone
– volume: 9
  year: 2018
  ident: B39
  article-title: Coral bacterial-core abundance and network complexity as proxies for anthropogenic pollution
  publication-title: Front. Microbiol.
  doi: 10.3389/fmicb.2018.00833
  contributor:
    fullname: Leite
– volume: 12
  start-page: 69
  year: 2014
  ident: B29
  article-title: The earth microbiome project: successes and aspirations
  publication-title: BMC Biol.
  doi: 10.1186/s12915-014-0069-1
  contributor:
    fullname: Gilbert
– volume: 14
  year: 2019
  ident: B35
  article-title: Sea Star wasting disease demography and etiology in the brooding sea star leptasterias spp
  publication-title: PloS One
  doi: 10.1371/journal.pone.0225248
  contributor:
    fullname: Jaffe
– volume: 6
  year: 2018
  ident: B64
  article-title: One health relationships between human, animal, and environmental microbiomes: a mini-review
  publication-title: Front. Public Health
  doi: 10.3389/fpubh.2018.00235
  contributor:
    fullname: Trinh
– volume: 4
  start-page: 9
  year: 2016
  ident: B66
  article-title: A quantitative key-opinion-leader analysis of innovation barriers in probiotic research and development: valorisation and improving the tech transfer cycle
  publication-title: PharmaNutrition
  doi: 10.1016/j.phanu.2015.09.003
  contributor:
    fullname: van den Nieuwboer
– volume: 5
  year: 2020
  ident: B1
  article-title: Introducing the mangrove microbiome initiative: identifying microbial research priorities and approaches to better understand, protect, and rehabilitate mangrove ecosystems
  publication-title: mSystems
  doi: 10.1128/mSystems.00658-20
  contributor:
    fullname: Allard
– volume: 37
  start-page: 1314
  year: 2019
  ident: B15
  article-title: Targeted isolation and cultivation of uncultivated bacteria by reverse genomics
  publication-title: Nat. Biotechnol.
  doi: 10.1038/s41587-019-0260-6
  contributor:
    fullname: Cross
– volume: 129
  start-page: 1441
  year: 2020
  ident: B45
  article-title: Ecological and biotechnological importance of secondary metabolites produced by coral-associated bacteria
  publication-title: J. Appl. Microbiol.
  doi: 10.1111/jam.14766
  contributor:
    fullname: Modolon
– volume: 13
  start-page: 406
  year: 2021
  ident: B13
  article-title: The seagrass holobiont: what we know and what we still need to disclose for its possible use as an ecological indicator
  publication-title: Water
  doi: 10.3390/w13040406
  contributor:
    fullname: Conte
– volume: 7
  year: 2022
  ident: B51
  article-title: Harnessing the microbiome to prevent global biodiversity loss
  publication-title: Nat. Microbiol
  doi: 10.1038/s41564-022-01173-1
  contributor:
    fullname: Peixoto
– volume: 98
  start-page: 99
  year: 2009
  ident: B60
  article-title: Differential modulation of eastern oyster (Crassostrea virginica) disease parasites by the El-Niño-Southern oscillation and the north Atlantic oscillation
  publication-title: Int. J. Earth Sci.
  doi: 10.1007/s00531-008-0364-6
  contributor:
    fullname: Soniat
– volume: 10
  start-page: 54
  year: 2022
  ident: B4
  article-title: The plant microbiota signature of the Anthropocene as a challenge for microbiome research
  publication-title: Microbiome
  doi: 10.1186/s40168-021-01224-5
  contributor:
    fullname: Berg
– volume: 308
  start-page: 487
  year: 2018
  ident: B17
  article-title: Human microbiome restoration and safety
  publication-title: Int. J. Med. Microbiol.
  doi: 10.1016/j.ijmm.2018.05.002
  contributor:
    fullname: Daliri
– volume: 91
  start-page: 925
  year: 2010
  ident: B25
  article-title: The ecology of climate change and infectious diseases: comment
  publication-title: Ecology
  doi: 10.1890/09-0761.1
  contributor:
    fullname: Epstein
– volume: 41
  start-page: 100
  year: 2020
  ident: B7
  article-title: Probiotics for corals
  publication-title: Microbiol. Aust.
  doi: 10.1071/MA20025
  contributor:
    fullname: Blackall
– volume: 8
  year: 2020
  ident: B8
  article-title: Defining coral bleaching as a microbial dysbiosis within the coral holobiont
  publication-title: Microorganisms
  doi: 10.3390/microorganisms8111682
  contributor:
    fullname: Boilard
– volume: 6
  year: 2019
  ident: B49
  article-title: Customized medicine for corals
  publication-title: Front. Mar. Sci
  doi: 10.3389/fmars.2019.00686/full
  contributor:
    fullname: Peixoto
– volume: 20
  year: 2019
  ident: B71
  article-title: Postbiotics and their potential applications in early life nutrition and beyond
  publication-title: Int. J. Mol. Sci.
  doi: 10.3390/ijms20194673
  contributor:
    fullname: Wegh
– volume: 9
  year: 2021
  ident: B68
  article-title: Exploring the diversity and biotechnological potential of cultured and uncultured coral-associated bacteria
  publication-title: Microorganisms
  doi: 10.3390/microorganisms9112235
  contributor:
    fullname: Vilela
– volume: 7
  year: 2020
  ident: B21
  article-title: Heat waves are a major threat to turbid coral reefs in Brazil
  publication-title: Front. Mar
  doi: 10.3389/fmars.2020.00179
  contributor:
    fullname: Duarte
– volume: 293
  start-page: 629
  year: 2001
  ident: B34
  article-title: Historical overfishing and the recent collapse of coastal ecosystems
  publication-title: Science
  doi: 10.1126/science.1059199
  contributor:
    fullname: Jackson
– volume: 7
  year: 2022
  ident: B65
  article-title: Climate warming amplifies the frequency of fish mass mortality events across north temperate lakes
  publication-title: Limnol. Oceanogr. Lett
  doi: 10.1002/lol2.10274
  contributor:
    fullname: Tye
– volume: 49
  start-page: 535
  year: 2011
  ident: B20
  article-title: Bacterial structure and characterization of plant growth promoting and oil degrading bacteria from the rhizospheres of mangrove plants
  publication-title: J. Microbiol.
  doi: 10.1007/s12275-011-0528-0
  contributor:
    fullname: do Carmo
– volume: 13
  start-page: 18
  year: 2015
  ident: B55
  article-title: Distribution and impact of yeast thermal tolerance permissive for mammalian infection
  publication-title: BMC Biol.
  doi: 10.1186/s12915-015-0127-3
  contributor:
    fullname: Robert
– volume: 13
  year: 2018
  ident: B44
  article-title: Elevated temperature drives kelp microbiome dysbiosis, while elevated carbon dioxide induces water microbiome disruption
  publication-title: PloS One
  doi: 10.1371/journal.pone.0192772
  contributor:
    fullname: Minich
SSID ssj0001340549
Score 2.3592014
Snippet Climate change is turning formerly pristine ecosystems into ever-changing states, causing major disturbance and biodiversity loss. Such impacted marine...
SourceID doaj
proquest
crossref
SourceType Open Website
Aggregation Database
SubjectTerms Anthropogenic factors
anthropogenic impacts
Biodiversity
Climate change
Coral reefs
Disease
Ecosystem resilience
Ecosystems
Environmental conditions
Environmental impact
Marine conservation
Marine ecosystems
microbial therapy
microbiome restoration
Microbiomes
Organisms
Pathogens
Probiotics
R&D
Rehabilitation
Research & development
Restoration
Symbionts
Wildlife conservation
SummonAdditionalLinks – databaseName: ProQuest Central
  dbid: BENPR
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1JS8QwFA46XkQQVxw3cvAmVbskTbyIiiKCC6LgrWTVAW11Oh68-st9L824IHgptGloyJfkfS_N-x4hWwAqBliCm5oZnoCF1glYRZVwUXqutGU-qO1fXPKzu-L8nt3HDbc2Hqscr4lhobaNwT3yXTCDQA1y4BcHL68JZo3Cv6sxhcYkmcrAU9jrkamjk8vrm-9dFqxQyC5aBrwxCXCBw7iDScNRWAGMVfrLIgXh_j_rcjA2p3NkNrJEetjBOk8mXL1AZq6MU3WUmF4kH4AwRSOERJEOWorSosq-0_Zx4IFH7lNoAxY9DzqxpWdHhyGPTACDqtrC_U-dbqpailLiNcz6JzpqmqcWrlA_6HA4Cp5qJ_xMrcOISrdE7k5Pbo_PkphRITG5YCNY2UpuGDM5hsAL6_eENBx8RKAR3AutrJZK5CJTFuZ2Kr1Kjc5SLy0yI0wFs0x6dVO7FUKdFrzMNLPcFYUCUpS5UnAhM-ZTy6zvk-1xr1YvnXBGBQ4HYlAFDCrEoIoY9MkRdvzXmyh6HR40w4cqzqFKFiaTAkyuKcrClkAW80IBf2JWa57nqk_Wx7BVcSbCV77Gzer_xWtkGlvUnQVcJ73R8M1tAOEY6c04qj4BS17WRw
  priority: 102
  providerName: ProQuest
Title The baseline is already shifted: marine microbiome restoration and rehabilitation as essential tools to mitigate ecosystem decline
URI https://www.proquest.com/docview/2831123405
https://doaj.org/article/94c298036c474d708534a8465dbb633a
Volume 10
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV1LS8QwEA6yXkQQn7i-yMGbVO0jaeJNZUUEVxGFvZU8ccHtiq0Hr_5yZ5KurHjw4qXQZ0K-SeabkvmGkEMAFRMsIUzNDE_AQ-sEvKJKuCg9V9oyH9T2b4f8-qm4GbHRXKkv3BMW5YHjwJ3IwmRSwDprirKwJTCEvFDgNJnVmud5pEanci6YCn9XciAihYxZMhCFSYAJAsVjLBaOggrwlfSHJwqC_b_W4-BkrlbJSscO6Xns1RpZcPU6Wb4zTtWdtPQG-QRkKTofJIh03FCUFFX2gzbPYw_88YxCH_DWZBxFliaOvoX6MQEEqmoL5_P63FQ1FCXEa5jtL7SdTl8aOML7QX_DUYhQo-AztQ4zKd0meboaPF5eJ10lhcTkgrWwopXcMGZyTH0X1p8KaTjEhkAfuBdaWS2VyEWmLMzpVHqVGp2lXlpkRFgCZov06mnttgl1WvAy08xyVxQKyFDmSsGFzJhPLbO-T45mo1q9RsGMCgINxKAKGFSIQdVh0CcXOPDfT6LYdbgAJlB1JlD9ZQJ9sjeDrepmILQicqCSaAY7_9HGLlnCfsedgnuk1769u32gI60-IIsXg-H9w0GwwC8GQ93L
link.rule.ids 315,783,787,867,2109,21400,27936,27937,33756,43817,74630
linkProvider Directory of Open Access Journals
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1NT9wwELUoe6BCqkop6lJafOitSks-7Ni9ILYCLRQWhEDiZvmTrgQJbJZDr_3lnXG80KoSl0iJY8Xysz1vHM8bQj4BqBhgCW5qYXkGFtpkYBV1xkUduDaOhai2fzLh48vq6IpdpQ23Lh2rXKyJcaF2rcU98q9gBoEalMAvdu_uM8wahX9XUwqNF2SAUlXgfA1G-5Oz86ddFqxQyT5aBrwxCXCBw_gFk4ajsAIYq_wfixSF-_9bl6OxOXhNXiWWSPd6WNfIkm_ekNVT63WTJKbXyW9AmKIRQqJIpx1FaVHtftHu5zQAj_xGoQ1YdDvtxZZuPZ3FPDIRDKobB_d_63RT3VGUEm9g1t_QedvedHCF-lGHw1PwVHvhZ-o8RlT6t-TyYP_i-zhLGRUyWwo2h5Wt5pYxW2IIvHBhR0jLwUcEGsGDMNoZqUUpCu1gbucy6NyaIg_SITPCVDAbZLlpG_-OUG8ErwvDHPdVpYEUFb4WXMiChdwxF4bk86JX1V0vnKHA4UAMVMRAIQYqYTAkI-z4xzdR9Do-aGfXKs0hJStbSAEm11Z15Wogi2WlgT8xZwwvSz0kWwvYVJqJ8JXHcbP5fPE2WRlfnByr48PJj_fkJbauPxe4RZbnswf_AcjH3HxMI-wPnVnZQQ
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1Lb9QwELZgKyFUCfEUWwr1gRsKbRLbsbkg-li1BZYKUak3y0-6Upu0m-2hV345M463UFXqJVLiWLH82TPfOPY3hLwHUPGAJYSplRMFeGhbgFc0hZBNFMZ6HpPa_vep2D9mhyf8JO9_6vO2yqVNTIbadw7XyDfBDQI1qIFfbMa8LeJod_L54rLADFL4pzWn03hIVhom6q0RWdnemx79_LfigpWZGk7OQGSmADoIHj9iAnEUWQDHVd7yTknE_46NTo5n8pQ8yYyRfhkgfkYehPY5Wf3hgmmz3PQL8gfQpuiQkDTSWU9RZtT4a9qfziJwyk8U2oBF57NBeOk80HnKKZOAoab1cP-_Zjc1PUVZ8RYswBlddN1ZD1eonzQ5AoWodRCBpj7g6crwkhxP9n7t7Bc5u0LhaskXYOUa4Th3NR6Hlz5uSeUExItAKUSU1nirjKxlZTzM81JFUzpblVF5ZEmYFuYVGbVdG14TGqwUTWW5F4ExAwSpCo0UUlU8lp77OCYflr2qLwYRDQ3BB2KgEwYaMdAZgzHZxo6_eRMFsNODbv5b5_mkFXOVkuB-HWuYb4A41swAl-LeWlHXZkzWl7DpPCvhKzdjaO3-4g3yCAaX_nYw_fqGPMbGDVsE18loMb8Kb4GHLOy7PMD-Aop53W8
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=The+baseline+is+already+shifted%3A+marine+microbiome+restoration+and+rehabilitation+as+essential+tools+to+mitigate+ecosystem+decline&rft.jtitle=Frontiers+in+Marine+Science&rft.au=Raquel+S.+Peixoto&rft.au=Christian+R.+Voolstra&rft.date=2023-06-30&rft.pub=Frontiers+Media+S.A&rft.eissn=2296-7745&rft.volume=10&rft_id=info:doi/10.3389%2Ffmars.2023.1218531&rft.externalDBID=DOA&rft.externalDocID=oai_doaj_org_article_94c298036c474d708534a8465dbb633a
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2296-7745&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2296-7745&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2296-7745&client=summon