Cognate putative nuclear localization signal effects strong nuclear localization of a GFP reporter and facilitates gene expression studies in Caenorhabditis elegans

Targeting a gene expression reporter, usually the green fluorescent protein (GFP), to the nucleus via a translationally fused nuclear localization signal (NLS) greatly facilitates recognition and identification of the reporter-expressing cells in Caenorhabditis elegans. Presently circulating nematod...

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Published inBioTechniques Vol. 43; no. 5; pp. 596, 598, 560 - 600
Main Authors LYSSENKO, Nicholas N, HANNA-ROSE, Wendy, SCHLEGEL, Robert A
Format Journal Article
LanguageEnglish
Published Natick, MA Eaton 01.11.2007
Taylor & Francis Group
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Abstract Targeting a gene expression reporter, usually the green fluorescent protein (GFP), to the nucleus via a translationally fused nuclear localization signal (NLS) greatly facilitates recognition and identification of the reporter-expressing cells in Caenorhabditis elegans. Presently circulating nematode transcriptional gene expression vectors use the viral NLS from simian virus 40 (SV40) large T antigen. This NLS, however fails to ensure sufficient localization of the GFP peptide to the nucleus. We modified the common transcriptional reporter SV40 NLS-GFP by adding to its C terminus a cognate putative NLS from the transcription factor egl-13. The EGL-13 NLS effected clear contrast in fluorescence intensity between the nucleus and the cytoplasm in cells with strong reporter signal and efficiently highlighted the nucleus in tissues with weak reporter expression in a wide range of tested tissues. The SV40 NLS-GFP-EGL-13 NLS vector should become a valuable tool for gene expression studies in C. elegans.
AbstractList Targeting a gene expression reporter, usually the green fluorescent protein (GFP), to the nucleus via a translationally fused nuclear localization signal (NLS) greatly facilitates recognition and identification of the reporter-expressing cells in Caenorhabditis elegans. Presently circulating nematode transcriptional gene expression vectors use the viral NLS from simian virus 40 (SV40) large T antigen. This NLS, however fails to ensure sufficient localization of the GFP peptide to the nucleus. We modified the common transcriptional reporter SV40 NLS-GFP by adding to its C terminus a cognate putative NLS from the transcription factor egl-13. The EGL-13 NLS effected clear contrast in fluorescence intensity between the nucleus and the cytoplasm in cells with strong reporter signal and efficiently highlighted the nucleus in tissues with weak reporter expression in a wide range of tested tissues. The SV40 NLS-GFP-EGL-13 NLS vector should become a valuable tool for gene expression studies in C. elegans.
Author SCHLEGEL, Robert A
HANNA-ROSE, Wendy
LYSSENKO, Nicholas N
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Cites_doi 10.1242/dev.126.1.169
10.1074/jbc.M601718200
10.1093/genetics/157.3.1217
10.1016/j.cell.2004.09.001
10.1016/S1388-1981(02)00324-4
10.1146/annurev.biochem.67.1.509
10.1016/0092-8674(87)90500-9
10.1104/pp.007971
10.1016/j.cub.2007.05.024
10.1895/wormbook.1.45.1
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Issue 5
Keywords Caenorhabditis elegans
Signal
Reporter gene
Helmintha
Nemathelminthia
Invertebrata
Gene expression
Localization
Nematoda
Language English
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References e_1_3_4_4_1
e_1_3_4_3_1
Fire A. (e_1_3_4_6_1) 1998
e_1_3_4_9_1
e_1_3_4_8_1
e_1_3_4_7_1
e_1_3_4_5_1
e_1_3_4_12_1
e_1_3_4_13_1
e_1_3_4_10_1
e_1_3_4_11_1
Hobert O. (e_1_3_4_2_1) 2006
Bargmann C.I. (e_1_3_4_14_1) 1995
References_xml – ident: e_1_3_4_10_1
  doi: 10.1242/dev.126.1.169
– start-page: 225
  volume-title: C. elegans: Modern Biological Analysis of an Organism
  year: 1995
  ident: e_1_3_4_14_1
  contributor:
    fullname: Bargmann C.I.
– ident: e_1_3_4_8_1
  doi: 10.1074/jbc.M601718200
– ident: e_1_3_4_5_1
  doi: 10.1093/genetics/157.3.1217
– ident: e_1_3_4_9_1
  doi: 10.1016/j.cell.2004.09.001
– ident: e_1_3_4_12_1
  doi: 10.1016/S1388-1981(02)00324-4
– ident: e_1_3_4_3_1
  doi: 10.1146/annurev.biochem.67.1.509
– start-page: 153
  volume-title: Green Fluorescent Protein: Properties, Applications, and Protocols
  year: 1998
  ident: e_1_3_4_6_1
  contributor:
    fullname: Fire A.
– ident: e_1_3_4_7_1
  doi: 10.1016/0092-8674(87)90500-9
– ident: e_1_3_4_13_1
  doi: 10.1104/pp.007971
– ident: e_1_3_4_11_1
  doi: 10.1016/j.cub.2007.05.024
– start-page: 203
  volume-title: Green Fluorescent Protein: Properties, Applications, and Protocols
  year: 2006
  ident: e_1_3_4_2_1
  contributor:
    fullname: Hobert O.
– ident: e_1_3_4_4_1
  doi: 10.1895/wormbook.1.45.1
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SubjectTerms Animals
Biological and medical sciences
Caenorhabditis elegans - genetics
Cell Nucleus - metabolism
Diverse techniques
Fundamental and applied biological sciences. Psychology
Gene Expression
Genes, Reporter
Green Fluorescent Proteins - metabolism
Molecular and cellular biology
Nuclear Localization Signals - metabolism
Protein Transport
Title Cognate putative nuclear localization signal effects strong nuclear localization of a GFP reporter and facilitates gene expression studies in Caenorhabditis elegans
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