Microbiologic profile of endodontic infections from HIV− and HIV+ patients using Multiple-Displacement Amplification and Checkerboard DNA-DNA Hybridization

Oral Diseases (2012) 18, 558–567 Objective:  To compare the microbiota of endodontic infections in necrotic pulp from HIV‐negative and HIV‐positive subjects. Materials and Methods:  Root canal samples from necrotic pulp were collected from 40 HIV− and 20 HIV+ subjects. Pulps were amplified using mul...

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Published inOral diseases Vol. 18; no. 6; pp. 558 - 567
Main Authors Brito, LCN, Sobrinho, AP Ribeiro, Teles, RP, Socransky, SS, Haffajee, AD, Vieira, LQ, Teles, FRF
Format Journal Article
LanguageEnglish
Published Oxford, UK Blackwell Publishing Ltd 01.09.2012
Wiley Subscription Services, Inc
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Online AccessGet full text
ISSN1354-523X
1601-0825
1601-0825
DOI10.1111/j.1601-0825.2012.01908.x

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Abstract Oral Diseases (2012) 18, 558–567 Objective:  To compare the microbiota of endodontic infections in necrotic pulp from HIV‐negative and HIV‐positive subjects. Materials and Methods:  Root canal samples from necrotic pulp were collected from 40 HIV− and 20 HIV+ subjects. Pulps were amplified using multiple displacement amplification (MDA). Then, checkerboard DNA–DNA hybridization was employed to assess the levels of 107 microbial taxa. The percentage of DNA probe count and the percentage of teeth colonized by each test species were investigated. Significant differences between groups regarding proportions of taxa and prevalence of the test species were sought using the Mann–Whitney test and the Chi‐square analysis, respectively. Results:  The most prevalent taxa detected were Dialister pneumosintes, Stenotrophomonas maltophilia, Streptococcus sobrinus, Corynebacterium diphteriae, and Helicobacter pylori among HIV‐ subjects and D. pneumosintes, Prevotella tannerae, Porphyromonas gingivalis, Parvimonas micra, Prevotella nigrescens, and Corynebacterium diphtheriae among HIV+ individuals. D. pneumosintes, C. diphtheria, and C. albicans were the most abundant species in the HIV‐ group, whereas the predominant taxa in HIV+ samples were P. tannerae, D. pneumosintes and Olsenella uli. P. tannerae, O. uli, Veilonella dispar, Bacteroides fragilis, and Actinomyces meyeri were significantly more abundant in HIV+ samples. Conclusions:  There were significant differences in the prevalence and proportions of specific microbial taxa between HIV− and HIV+ individuals. The root canal microbiota may represent a reservoir of important oral and medical pathogens, mainly in HIV+ individuals.
AbstractList Objective: To compare the microbiota of endodontic infections in necrotic pulp from HIV-negative and HIV-positive subjects. Materials and Methods: Root canal samples from necrotic pulp were collected from 40 HIV- and 20 HIV+ subjects. Pulps were amplified using multiple displacement amplification (MDA). Then, checkerboard DNA-DNA hybridization was employed to assess the levels of 107 microbial taxa. The percentage of DNA probe count and the percentage of teeth colonized by each test species were investigated. Significant differences between groups regarding proportions of taxa and prevalence of the test species were sought using the Mann-Whitney test and the Chi-square analysis, respectively. Results: The most prevalent taxa detected were Dialister pneumosintes, Stenotrophomonas maltophilia, Streptococcus sobrinus, Corynebacterium diphteriae, and Helicobacter pylori among HIV- subjects and D. pneumosintes, Prevotella tannerae, Porphyromonas gingivalis, Parvimonas micra, Prevotella nigrescens, and Corynebacterium diphtheriae among HIV+ individuals. D. pneumosintes, C. diphtheria, and C. albicans were the most abundant species in the HIV- group, whereas the predominant taxa in HIV+ samples were P. tannerae, D. pneumosintes and Olsenella uli. P. tannerae, O. uli, Veilonella dispar, Bacteroides fragilis, and Actinomyces meyeri were significantly more abundant in HIV+ samples. Conclusions: There were significant differences in the prevalence and proportions of specific microbial taxa between HIV- and HIV+ individuals. The root canal microbiota may represent a reservoir of important oral and medical pathogens, mainly in HIV+ individuals.Original Abstract: Oral Diseases (2012) 18, 558-567
Oral Diseases (2012) 18, 558-567 Objective: To compare the microbiota of endodontic infections in necrotic pulp from HIV-negative and HIV-positive subjects. Materials and Methods: Root canal samples from necrotic pulp were collected from 40 HIV- and 20 HIV+ subjects. Pulps were amplified using multiple displacement amplification (MDA). Then, checkerboard DNA-DNA hybridization was employed to assess the levels of 107 microbial taxa. The percentage of DNA probe count and the percentage of teeth colonized by each test species were investigated. Significant differences between groups regarding proportions of taxa and prevalence of the test species were sought using the Mann-Whitney test and the Chi-square analysis, respectively. Results: The most prevalent taxa detected were Dialister pneumosintes, Stenotrophomonas maltophilia, Streptococcus sobrinus, Corynebacterium diphteriae, and Helicobacter pylori among HIV- subjects and D. pneumosintes, Prevotella tannerae, Porphyromonas gingivalis, Parvimonas micra, Prevotella nigrescens, and Corynebacterium diphtheriae among HIV+ individuals. D. pneumosintes, C. diphtheria, and C. albicans were the most abundant species in the HIV- group, whereas the predominant taxa in HIV+ samples were P. tannerae, D. pneumosintes and Olsenella uli. P. tannerae, O. uli, Veilonella dispar, Bacteroides fragilis, and Actinomyces meyeri were significantly more abundant in HIV+ samples. Conclusions: There were significant differences in the prevalence and proportions of specific microbial taxa between HIV- and HIV+ individuals. The root canal microbiota may represent a reservoir of important oral and medical pathogens, mainly in HIV+ individuals. [PUBLICATION ABSTRACT]
To compare the microbiota of endodontic infections in necrotic pulp from HIV-negative and HIV-positive subjects.OBJECTIVETo compare the microbiota of endodontic infections in necrotic pulp from HIV-negative and HIV-positive subjects.Root canal samples from necrotic pulp were collected from 40 HIV- and 20 HIV+ subjects. Pulps were amplified using multiple displacement amplification (MDA). Then, checkerboard DNA-DNA hybridization was employed to assess the levels of 107 microbial taxa. The percentage of DNA probe count and the percentage of teeth colonized by each test species were investigated. Significant differences between groups regarding proportions of taxa and prevalence of the test species were sought using the Mann-Whitney test and the Chi-square analysis, respectively.MATERIALS AND METHODSRoot canal samples from necrotic pulp were collected from 40 HIV- and 20 HIV+ subjects. Pulps were amplified using multiple displacement amplification (MDA). Then, checkerboard DNA-DNA hybridization was employed to assess the levels of 107 microbial taxa. The percentage of DNA probe count and the percentage of teeth colonized by each test species were investigated. Significant differences between groups regarding proportions of taxa and prevalence of the test species were sought using the Mann-Whitney test and the Chi-square analysis, respectively.The most prevalent taxa detected were Dialister pneumosintes, Stenotrophomonas maltophilia, Streptococcus sobrinus, Corynebacterium diphteriae, and Helicobacter pylori among HIV- subjects and D. pneumosintes, Prevotella tannerae, Porphyromonas gingivalis, Parvimonas micra, Prevotella nigrescens, and Corynebacterium diphtheriae among HIV+ individuals. D. pneumosintes, C. diphtheria, and C. albicans were the most abundant species in the HIV- group, whereas the predominant taxa in HIV+ samples were P. tannerae, D. pneumosintes and Olsenella uli. P. tannerae, O. uli, Veilonella dispar, Bacteroides fragilis, and Actinomyces meyeri were significantly more abundant in HIV+ samples.RESULTSThe most prevalent taxa detected were Dialister pneumosintes, Stenotrophomonas maltophilia, Streptococcus sobrinus, Corynebacterium diphteriae, and Helicobacter pylori among HIV- subjects and D. pneumosintes, Prevotella tannerae, Porphyromonas gingivalis, Parvimonas micra, Prevotella nigrescens, and Corynebacterium diphtheriae among HIV+ individuals. D. pneumosintes, C. diphtheria, and C. albicans were the most abundant species in the HIV- group, whereas the predominant taxa in HIV+ samples were P. tannerae, D. pneumosintes and Olsenella uli. P. tannerae, O. uli, Veilonella dispar, Bacteroides fragilis, and Actinomyces meyeri were significantly more abundant in HIV+ samples.There were significant differences in the prevalence and proportions of specific microbial taxa between HIV- and HIV+ individuals. The root canal microbiota may represent a reservoir of important oral and medical pathogens, mainly in HIV+ individuals.CONCLUSIONSThere were significant differences in the prevalence and proportions of specific microbial taxa between HIV- and HIV+ individuals. The root canal microbiota may represent a reservoir of important oral and medical pathogens, mainly in HIV+ individuals.
Oral Diseases (2012) 18, 558–567 Objective:  To compare the microbiota of endodontic infections in necrotic pulp from HIV‐negative and HIV‐positive subjects. Materials and Methods:  Root canal samples from necrotic pulp were collected from 40 HIV− and 20 HIV+ subjects. Pulps were amplified using multiple displacement amplification (MDA). Then, checkerboard DNA–DNA hybridization was employed to assess the levels of 107 microbial taxa. The percentage of DNA probe count and the percentage of teeth colonized by each test species were investigated. Significant differences between groups regarding proportions of taxa and prevalence of the test species were sought using the Mann–Whitney test and the Chi‐square analysis, respectively. Results:  The most prevalent taxa detected were Dialister pneumosintes, Stenotrophomonas maltophilia, Streptococcus sobrinus, Corynebacterium diphteriae, and Helicobacter pylori among HIV‐ subjects and D. pneumosintes, Prevotella tannerae, Porphyromonas gingivalis, Parvimonas micra, Prevotella nigrescens, and Corynebacterium diphtheriae among HIV+ individuals. D. pneumosintes, C. diphtheria, and C. albicans were the most abundant species in the HIV‐ group, whereas the predominant taxa in HIV+ samples were P. tannerae, D. pneumosintes and Olsenella uli. P. tannerae, O. uli, Veilonella dispar, Bacteroides fragilis, and Actinomyces meyeri were significantly more abundant in HIV+ samples. Conclusions:  There were significant differences in the prevalence and proportions of specific microbial taxa between HIV− and HIV+ individuals. The root canal microbiota may represent a reservoir of important oral and medical pathogens, mainly in HIV+ individuals.
Oral Diseases (2012) 18, 558–567 Objective:  To compare the microbiota of endodontic infections in necrotic pulp from HIV‐negative and HIV‐positive subjects. Materials and Methods:  Root canal samples from necrotic pulp were collected from 40 HIV− and 20 HIV+ subjects. Pulps were amplified using multiple displacement amplification (MDA). Then, checkerboard DNA–DNA hybridization was employed to assess the levels of 107 microbial taxa. The percentage of DNA probe count and the percentage of teeth colonized by each test species were investigated. Significant differences between groups regarding proportions of taxa and prevalence of the test species were sought using the Mann–Whitney test and the Chi‐square analysis, respectively. Results:  The most prevalent taxa detected were Dialister pneumosintes , Stenotrophomonas maltophilia , Streptococcus sobrinus , Corynebacterium diphteriae , and Helicobacter pylori among HIV‐ subjects and D. pneumosintes , Prevotella tannerae , Porphyromonas gingivalis , Parvimonas micra , Prevotella nigrescens , and Corynebacterium diphtheriae among HIV+ individuals. D. pneumosintes , C. diphtheria , and C. albicans were the most abundant species in the HIV‐ group, whereas the predominant taxa in HIV+ samples were P. tannerae , D. pneumosintes and Olsenella uli . P. tannerae , O. uli , Veilonella dispar , Bacteroides fragilis , and Actinomyces meyeri were significantly more abundant in HIV+ samples. Conclusions:  There were significant differences in the prevalence and proportions of specific microbial taxa between HIV− and HIV+ individuals. The root canal microbiota may represent a reservoir of important oral and medical pathogens, mainly in HIV+ individuals.
To compare the microbiota of endodontic infections in necrotic pulp from HIV-negative and HIV-positive subjects. Root canal samples from necrotic pulp were collected from 40 HIV- and 20 HIV+ subjects. Pulps were amplified using multiple displacement amplification (MDA). Then, checkerboard DNA-DNA hybridization was employed to assess the levels of 107 microbial taxa. The percentage of DNA probe count and the percentage of teeth colonized by each test species were investigated. Significant differences between groups regarding proportions of taxa and prevalence of the test species were sought using the Mann-Whitney test and the Chi-square analysis, respectively. The most prevalent taxa detected were Dialister pneumosintes, Stenotrophomonas maltophilia, Streptococcus sobrinus, Corynebacterium diphteriae, and Helicobacter pylori among HIV- subjects and D. pneumosintes, Prevotella tannerae, Porphyromonas gingivalis, Parvimonas micra, Prevotella nigrescens, and Corynebacterium diphtheriae among HIV+ individuals. D. pneumosintes, C. diphtheria, and C. albicans were the most abundant species in the HIV- group, whereas the predominant taxa in HIV+ samples were P. tannerae, D. pneumosintes and Olsenella uli. P. tannerae, O. uli, Veilonella dispar, Bacteroides fragilis, and Actinomyces meyeri were significantly more abundant in HIV+ samples. There were significant differences in the prevalence and proportions of specific microbial taxa between HIV- and HIV+ individuals. The root canal microbiota may represent a reservoir of important oral and medical pathogens, mainly in HIV+ individuals.
Author Haffajee, AD
Brito, LCN
Teles, RP
Vieira, LQ
Socransky, SS
Teles, FRF
Sobrinho, AP Ribeiro
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  givenname: AP Ribeiro
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  surname: Teles
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  organization: Department of Periodontology, The Forsyth Institute, Cambridge, MA, USA
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  surname: Teles
  fullname: Teles, FRF
  organization: Department of Periodontology, The Forsyth Institute, Cambridge, MA, USA
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PublicationTitle Oral diseases
PublicationTitleAlternate Oral Dis
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Publisher Blackwell Publishing Ltd
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References Brito LC, Teles FR, Teles RP et al (2007). Use of multiple-displacement amplification and checkerboard DNA-DNA hybridization to examine the microbiota of endodontic infections. J Clin Microbiol 45: 3039-3049.
Chavez de Paz LE, Molander A, Dahlen G (2004). Gram-positive rods prevailing in teeth with apical periodontitis undergoing root canal treatment. Int Endod J 37: 579-587.
Lv FJ, Luo XL, Meng X, Jin R, Ding HG, Zhang ST (2007). A low prevalence of H. pylori and endoscopic findings in HIV-positive Chinese patients with gastrointestinal symptoms. World J Gastroenterol 13: 5492-5496.
Tenenbaum H, Elkaim R, Cuisinier F, Dahan M, Zamanian P, Lang JM (1997). Prevalence of six periodontal pathogens detected by DNA probe method in HIV vs non-HIV periodontitis. Oral Dis 3(Suppl 1): S153-S155.
Patel M, Coogan M, Galpin JS (2003). Periodontal pathogens in subgingival plaque of HIV-positive subjects with chronic periodontitis. Oral Microbiol Immunol 18: 199-201.
Nandakumar R, Whiting J, Fouad AF (2008). Identification of selected respiratory pathogens in endodontic infections. Oral Surg Oral Med Oral Pathol Oral Radiol Endod 106: 145-151.
Miranda TT, Vianna CR, Rodrigues L, Monteiro AS, Rosa CA, Correa A Jr (2009). Diversity and frequency of yeasts from the dorsum of the tongue and necrotic root canals associated with primary apical periodontitis. Int Endod J 42: 839-844.
Aas JA, Barbuto SM, Alpagot T, Olsen I, Dewhirst FE, Paster BJ (2007). Subgingival plaque microbiota in HIV positive patients. J Clin Periodontol 34: 189-195.
de Brito LC, da Rosa MA, Lopes VS, e Ferreira EF, Vieira LQ, Sobrinho AP (2009). Brazilian HIV-infected population: assessment of the needs of endodontic treatment in the post-highly active antiretroviral therapy era. J Endod 35: 1178-1181.
Teles FR, Teles RP, Uzel NG et al (2011). Early microbial succession in redeveloping dental biofilms in periodontal health and disease. J Periodontal Res 47(1): 95-104.
Navazesh M, Mulligan R, Pogoda J et al (2005). The effect of HAART on salivary microbiota in the Women's Interagency HIV Study (WIHS). Oral Surg Oral Med Oral Pathol Oral Radiol Endod 100: 701-708.
Roças IN, Siqueira JF Jr (2005). Species-directed 16S rRNA gene nested PCR detection of Olsenella species in association with endodontic diseases. Lett Appl Microbiol 41: 12-16.
Dean FB, Hosono S, Fang L et al (2002). Comprehensive human genome amplification using multiple displacement amplification. Proc Natl Acad Sci U S A 99: 5261-5266.
Teles F, Haffajee AD, Socransky SS (2007). Multiple displacement amplification as an aid in checkerboard DNA-DNA hybridization. Oral Microbiol Immunol 22: 118-125.
Rams TE, Andriolo M Jr, Feik D, Abel SN, McGivern TM, Slots J (1991). Microbiological study of HIV-related periodontitis. J Periodontol 62: 74-81.
Scannapieco FA, Rethman MP (2003). The relationship between periodontal diseases and respiratory diseases. Dent Today 22: 79-83.
Socransky SS, Haffajee AD, Smith C et al (2004). Use of checkerboard DNA-DNA hybridization to study complex microbial ecosystems. Oral Microbiol Immunol 19: 352-362.
Contreras A, Doan N, Chen C, Rusitanonta T, Flynn MJ, Slots J (2000). Importance of Dialister pneumosintes in human periodontitis. Oral Microbiol Immunol 15: 269-272.
Xia T, Baumgartner JC, David LL (2000). Isolation and identification of Prevotella tannerae from endodontic infections. Oral Microbiol Immunol 15: 273-275.
Mager DL, Ximenez-Fyvie LA, Haffajee AD, Socransky SS (2003). Distribution of selected bacterial species on intraoral surfaces. J Clin Periodontol 30: 644-654.
Panos GZ, Xirouchakis E, Tzias V et al (2007). Helicobacter pylori infection in symptomatic HIV-seropositive and -seronegative patients: a case-control study. AIDS Res Hum Retroviruses 23: 709-712.
Colombo AP, Boches SK, Cotton SL et al (2009). Comparisons of subgingival microbial profiles of refractory periodontitis, severe periodontitis, and periodontal health using the human oral microbe identification microarray. J Periodontol 80: 1421-1432.
Gonçalves LS, Soares Ferreira SM, Souza CO, Souto R, Colombo AP (2007). Clinical and microbiological profiles of human immunodeficiency virus (HIV)-seropositive Brazilians undergoing highly active antiretroviral therapy and HIV-seronegative Brazilians with chronic periodontitis. J Periodontol 78: 87-96.
Zou QH, Li RQ (2011). Helicobacter pylori in the oral cavity and gastric mucosa: a meta-analysis. J Oral Pathol Med 40: 317-324.
Smith GL, Socransky SS, Smith CM (1989). Rapid method for the purification of DNA from subgingival microorganisms. Oral Microbiol Immunol 4: 47-51.
Siqueira JF Jr, Roças IN (2002). Dialister pneumosintes can be a suspected endodontic pathogen. Oral Surg Oral Med Oral Pathol Oral Radiol Endod 94: 494-498.
Socransky SS, Haffajee AD (2005). Periodontal microbial ecology. Periodontol 2000 38: 135-187.
Tavares WL, Neves de Brito LC, Teles RP et al (2011). Microbiota of deciduous endodontic infections analysed by MDA and Checkerboard DNA-DNA hybridization. Int Endod J 44: 225-235.
Back-Brito GN, Mota AJ, Vasconcellos TC et al (2009). Frequency of Candida spp. in the oral cavity of Brazilian HIV-positive patients and correlation with CD4 cell counts and viral load. Mycopathologia 167: 81-87.
Möller AJ (1966). Microbiological examination of root canals and periapical tissues of human teeth. Methodological studies. Odontol Tidskr 74(Suppl. 1): 1-380.
Rasmussen BA, Bush K, Tally FP (1997). Antimicrobial resistance in anaerobes. Clin Infect Dis 24(Suppl 1): S110-S120.
Shchipkova AY, Nagaraja HN, Kumar PS (2010). Subgingival microbial profiles of smokers with periodontitis. J Dent Res 89: 1247-1253.
Didilescu AC, Skaug N, Marica C, Didilescu C (2005). Respiratory pathogens in dental plaque of hospitalized patients with chronic lung diseases. Clin Oral Investig 9: 141-147.
Teles RP, Patel M, Socransky SS, Haffajee AD (2008). Disease progression in periodontally healthy and maintenance subjects. J Periodontol 79: 784-794.
Shetty K, Garcia J, Leigh J (2006). Success of root canal therapy in HIV-positive patients. Gen Dent 54: 397-402.
Siqueira JF Jr, Roças IN, Cunha CD, Rosado AS (2005). Novel bacterial phylotypes in endodontic infections. J Dent Res 84: 565-569.
Coogan MM, Greenspan J, Challacombe SJ (2005). Oral lesions in infection with human immunodeficiency virus. Bull World Health Organ 83: 700-706.
Cannon RD, Chaffin WL (1999). Oral colonization by Candida albicans. Crit Rev Oral Biol Med 10: 359-383.
Scully C, Porter SR, Mutlu S, Epstein JB, Glover S, Kumar N (1999). Periodontopathic bacteria in English HIV-seropositive persons. AIDS Patient Care STDS 13: 369-374.
Domaneschi C, Massarente DB, de Freitas RS et al (2011). Oral colonization by Candida species in AIDS pediatric patients. Oral Dis 17: 393-398.
Romanelli F, Smith KM, Murphy BS (2007). Does HIV infection alter the incidence or pathology of Helicobacter pylori infection? AIDS Patient Care STDS 21: 908-919.
Mai M, Hoyer JD, McClure RF (2004). Use of multiple displacement amplification to amplify genomic DNA before sequencing of the alpha and beta haemoglobin genes. J Clin Pathol 57: 637-640.
Siqueira JF Jr, Roças IN (2009). Diversity of endodontic microbiota revisited. J Dent Res 88: 969-981.
Socransky SS, Haffajee AD, Cugini MA, Smith C, Kent RL Jr (1998). Microbial complexes in subgingival plaque. J Clin Periodontol 25: 134-144.
Scannapieco FA, Bush RB, Paju S (2003). Associations between periodontal disease and risk for nosocomial bacterial pneumonia and chronic obstructive pulmonary disease. A systematic review. Ann Periodontol 8: 54-69.
UNAIDS (2011). Report on the global AIDS epidemic. WHO: Geneva, Switzerland.
Quesnell BT, Alves M, Hawkinson RW Jr, Johnson BR, Wenckus CS, BeGole EA (2005). The effect of human immunodeficiency virus on endodontic treatment outcome. J Endod 31: 633-636.
Haffajee AD, Socransky SS, Patel MR, Song X (2008). Microbial complexes in supragingival plaque. Oral Microbiol Immunol 23: 196-205.
Tsang CS, Samaranayake LP (2001). Predominant cultivable subgingival microbiota of healthy and HIV-infected ethnic Chinese. APMIS 109: 117-126.
Alley BS, Buchanan TH, Eleazer PD (2008). Comparison of the success of root canal therapy in HIV/AIDS patients and non-infected controls. Gen Dent 56: 155-157.
Uzel NG, Teles FR, Teles RP et al (2011). Microbial shifts during dental biofilm re-development in the absence of oral hygiene in periodontal health and disease. J Clin Periodontol 38: 612-620.
de Souza Gonçalves L, Souto R, Colombo AP (2009). Detection of Helicobacter pylori, Enterococcus faecalis, and Pseudomonas aeruginosa in the subgingival biofilm of HIV-infected subjects undergoing HAART with chronic periodontitis. Eur J Clin Microbiol Infect Dis 28: 1335-1342.
Gao J, Li Y, Wang Q, Qi C, Zhu S (2011). Correlation between distribution of Helicobacter pylori in oral cavity and chronic stomach conditions. J Huazhong Univ Sci Technolog Med Sci 31: 409-412.
Lizardi PM, Huang X, Zhu Z, Bray-Ward P, Thomas DC, Ward DC (1998). Mutation detection and single-molecule counting using isothermal rolling-circle amplification. Nat Genet 19: 225-232.
Perello R, Miro O, Marcos MA et al (2010). Predicting bacteremic pneumonia in HIV-1-infected patients consulting the ED. Am J Emerg Med 28: 454-459.
Suchina JA, Levine D, Flaitz CM, Nichols CM, Hicks MJ (2006). Retrospective clinical and radiologic evaluation of nonsurgical endodontic treatment in human immunodeficiency virus (HIV) infection. J Contemp Dent Pract 7: 1-8.
Chattin BR, Ishihara K, Okuda K, Hirai Y, Ishikawa T (1999). Specific microbial colonizations in the periodontal sites of HIV-infected subjects. Microbiol Immunol 43: 847-852.
Chaudhry R, Kalra N, Talwar V, Thakur R (1997). Anaerobic flora in endodontic infections. Indian J Med Res 105: 262-265.
Sassone L, Fidel R, Figueiredo L, Fidel S, Faveri M, Feres M (2007). Evaluation of the microbiota of primary endodontic infections using checkerboard DNA-DNA hybridization. Oral Microbiol Immunol 22: 390-397.
Baradkar VP, Kum
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References_xml – reference: Back-Brito GN, Mota AJ, Vasconcellos TC et al (2009). Frequency of Candida spp. in the oral cavity of Brazilian HIV-positive patients and correlation with CD4 cell counts and viral load. Mycopathologia 167: 81-87.
– reference: Contreras A, Doan N, Chen C, Rusitanonta T, Flynn MJ, Slots J (2000). Importance of Dialister pneumosintes in human periodontitis. Oral Microbiol Immunol 15: 269-272.
– reference: Shchipkova AY, Nagaraja HN, Kumar PS (2010). Subgingival microbial profiles of smokers with periodontitis. J Dent Res 89: 1247-1253.
– reference: Cannon RD, Chaffin WL (1999). Oral colonization by Candida albicans. Crit Rev Oral Biol Med 10: 359-383.
– reference: Möller AJ (1966). Microbiological examination of root canals and periapical tissues of human teeth. Methodological studies. Odontol Tidskr 74(Suppl. 1): 1-380.
– reference: Socransky SS, Haffajee AD (2005). Periodontal microbial ecology. Periodontol 2000 38: 135-187.
– reference: Dean FB, Hosono S, Fang L et al (2002). Comprehensive human genome amplification using multiple displacement amplification. Proc Natl Acad Sci U S A 99: 5261-5266.
– reference: Mager DL, Ximenez-Fyvie LA, Haffajee AD, Socransky SS (2003). Distribution of selected bacterial species on intraoral surfaces. J Clin Periodontol 30: 644-654.
– reference: Shetty K, Garcia J, Leigh J (2006). Success of root canal therapy in HIV-positive patients. Gen Dent 54: 397-402.
– reference: Teles FR, Teles RP, Uzel NG et al (2011). Early microbial succession in redeveloping dental biofilms in periodontal health and disease. J Periodontal Res 47(1): 95-104.
– reference: Nandakumar R, Whiting J, Fouad AF (2008). Identification of selected respiratory pathogens in endodontic infections. Oral Surg Oral Med Oral Pathol Oral Radiol Endod 106: 145-151.
– reference: Colombo AP, Boches SK, Cotton SL et al (2009). Comparisons of subgingival microbial profiles of refractory periodontitis, severe periodontitis, and periodontal health using the human oral microbe identification microarray. J Periodontol 80: 1421-1432.
– reference: Rasmussen BA, Bush K, Tally FP (1997). Antimicrobial resistance in anaerobes. Clin Infect Dis 24(Suppl 1): S110-S120.
– reference: Romanelli F, Smith KM, Murphy BS (2007). Does HIV infection alter the incidence or pathology of Helicobacter pylori infection? AIDS Patient Care STDS 21: 908-919.
– reference: Tavares WL, Neves de Brito LC, Teles RP et al (2011). Microbiota of deciduous endodontic infections analysed by MDA and Checkerboard DNA-DNA hybridization. Int Endod J 44: 225-235.
– reference: Perello R, Miro O, Marcos MA et al (2010). Predicting bacteremic pneumonia in HIV-1-infected patients consulting the ED. Am J Emerg Med 28: 454-459.
– reference: Rams TE, Andriolo M Jr, Feik D, Abel SN, McGivern TM, Slots J (1991). Microbiological study of HIV-related periodontitis. J Periodontol 62: 74-81.
– reference: Didilescu AC, Skaug N, Marica C, Didilescu C (2005). Respiratory pathogens in dental plaque of hospitalized patients with chronic lung diseases. Clin Oral Investig 9: 141-147.
– reference: Baradkar VP, Kumar S (2009). Species identification of Candida isolates obtained from oral lesions of HIV infected patients. Indian J Dermatol 54: 385-386.
– reference: Smith GL, Socransky SS, Smith CM (1989). Rapid method for the purification of DNA from subgingival microorganisms. Oral Microbiol Immunol 4: 47-51.
– reference: Vianna ME, Horz HP, Gomes BP, Conrads G (2005). Microarrays complement culture methods for identification of bacteria in endodontic infections. Oral Microbiol Immunol 20: 253-258.
– reference: Lv FJ, Luo XL, Meng X, Jin R, Ding HG, Zhang ST (2007). A low prevalence of H. pylori and endoscopic findings in HIV-positive Chinese patients with gastrointestinal symptoms. World J Gastroenterol 13: 5492-5496.
– reference: UNAIDS (2011). Report on the global AIDS epidemic. WHO: Geneva, Switzerland.
– reference: Brito LC, Teles FR, Teles RP et al (2007). Use of multiple-displacement amplification and checkerboard DNA-DNA hybridization to examine the microbiota of endodontic infections. J Clin Microbiol 45: 3039-3049.
– reference: Gerber J, Wenaweser D, Heitz-Mayfield L, Lang NP, Persson GR (2006). Comparison of bacterial plaque samples from titanium implant and tooth surfaces by different methods. Clin Oral Implants Res 17: 1-7.
– reference: Quesnell BT, Alves M, Hawkinson RW Jr, Johnson BR, Wenckus CS, BeGole EA (2005). The effect of human immunodeficiency virus on endodontic treatment outcome. J Endod 31: 633-636.
– reference: de Brito LC, da Rosa MA, Lopes VS, e Ferreira EF, Vieira LQ, Sobrinho AP (2009). Brazilian HIV-infected population: assessment of the needs of endodontic treatment in the post-highly active antiretroviral therapy era. J Endod 35: 1178-1181.
– reference: Miranda TT, Vianna CR, Rodrigues L, Monteiro AS, Rosa CA, Correa A Jr (2009). Diversity and frequency of yeasts from the dorsum of the tongue and necrotic root canals associated with primary apical periodontitis. Int Endod J 42: 839-844.
– reference: Haffajee AD, Socransky SS, Patel MR, Song X (2008). Microbial complexes in supragingival plaque. Oral Microbiol Immunol 23: 196-205.
– reference: Teles F, Haffajee AD, Socransky SS (2007). Multiple displacement amplification as an aid in checkerboard DNA-DNA hybridization. Oral Microbiol Immunol 22: 118-125.
– reference: Mai M, Hoyer JD, McClure RF (2004). Use of multiple displacement amplification to amplify genomic DNA before sequencing of the alpha and beta haemoglobin genes. J Clin Pathol 57: 637-640.
– reference: Zou QH, Li RQ (2011). Helicobacter pylori in the oral cavity and gastric mucosa: a meta-analysis. J Oral Pathol Med 40: 317-324.
– reference: Xia T, Baumgartner JC, David LL (2000). Isolation and identification of Prevotella tannerae from endodontic infections. Oral Microbiol Immunol 15: 273-275.
– reference: Siqueira JF Jr, Roças IN (2002). Dialister pneumosintes can be a suspected endodontic pathogen. Oral Surg Oral Med Oral Pathol Oral Radiol Endod 94: 494-498.
– reference: Uzel NG, Teles FR, Teles RP et al (2011). Microbial shifts during dental biofilm re-development in the absence of oral hygiene in periodontal health and disease. J Clin Periodontol 38: 612-620.
– reference: Coogan MM, Greenspan J, Challacombe SJ (2005). Oral lesions in infection with human immunodeficiency virus. Bull World Health Organ 83: 700-706.
– reference: Sachdeo A, Haffajee AD, Socransky SS (2008). Biofilms in the edentulous oral cavity. J Prosthodont 17: 348-356.
– reference: Teles RP, Patel M, Socransky SS, Haffajee AD (2008). Disease progression in periodontally healthy and maintenance subjects. J Periodontol 79: 784-794.
– reference: Panos GZ, Xirouchakis E, Tzias V et al (2007). Helicobacter pylori infection in symptomatic HIV-seropositive and -seronegative patients: a case-control study. AIDS Res Hum Retroviruses 23: 709-712.
– reference: Chattin BR, Ishihara K, Okuda K, Hirai Y, Ishikawa T (1999). Specific microbial colonizations in the periodontal sites of HIV-infected subjects. Microbiol Immunol 43: 847-852.
– reference: Domaneschi C, Massarente DB, de Freitas RS et al (2011). Oral colonization by Candida species in AIDS pediatric patients. Oral Dis 17: 393-398.
– reference: Gonçalves LS, Soares Ferreira SM, Souza CO, Souto R, Colombo AP (2007). Clinical and microbiological profiles of human immunodeficiency virus (HIV)-seropositive Brazilians undergoing highly active antiretroviral therapy and HIV-seronegative Brazilians with chronic periodontitis. J Periodontol 78: 87-96.
– reference: Tenenbaum H, Elkaim R, Cuisinier F, Dahan M, Zamanian P, Lang JM (1997). Prevalence of six periodontal pathogens detected by DNA probe method in HIV vs non-HIV periodontitis. Oral Dis 3(Suppl 1): S153-S155.
– reference: Chaudhry R, Kalra N, Talwar V, Thakur R (1997). Anaerobic flora in endodontic infections. Indian J Med Res 105: 262-265.
– reference: Siqueira JF Jr, Roças IN, Cunha CD, Rosado AS (2005). Novel bacterial phylotypes in endodontic infections. J Dent Res 84: 565-569.
– reference: Aas JA, Barbuto SM, Alpagot T, Olsen I, Dewhirst FE, Paster BJ (2007). Subgingival plaque microbiota in HIV positive patients. J Clin Periodontol 34: 189-195.
– reference: Ramirez-Amador V, Esquivel-Pedraza L, Sierra-Madero J, Anaya-Saavedra G, Gonzalez-Ramirez I, Ponce-de-Leon S (2003). The changing clinical spectrum of human immunodeficiency virus (HIV)-related oral lesions in 1,000 consecutive patients: a 12-year study in a referral center in Mexico. Medicine (Baltimore) 82: 39-50.
– reference: Roças IN, Siqueira JF Jr (2005). Species-directed 16S rRNA gene nested PCR detection of Olsenella species in association with endodontic diseases. Lett Appl Microbiol 41: 12-16.
– reference: Suchina JA, Levine D, Flaitz CM, Nichols CM, Hicks MJ (2006). Retrospective clinical and radiologic evaluation of nonsurgical endodontic treatment in human immunodeficiency virus (HIV) infection. J Contemp Dent Pract 7: 1-8.
– reference: Sundqvist G (1992). Associations between microbial species in dental root canal infections. Oral Microbiol Immunol 7: 257-262.
– reference: Siqueira JF Jr, Roças IN (2009). Diversity of endodontic microbiota revisited. J Dent Res 88: 969-981.
– reference: Patel M, Coogan M, Galpin JS (2003). Periodontal pathogens in subgingival plaque of HIV-positive subjects with chronic periodontitis. Oral Microbiol Immunol 18: 199-201.
– reference: de Souza Gonçalves L, Souto R, Colombo AP (2009). Detection of Helicobacter pylori, Enterococcus faecalis, and Pseudomonas aeruginosa in the subgingival biofilm of HIV-infected subjects undergoing HAART with chronic periodontitis. Eur J Clin Microbiol Infect Dis 28: 1335-1342.
– reference: Sassone L, Fidel R, Figueiredo L, Fidel S, Faveri M, Feres M (2007). Evaluation of the microbiota of primary endodontic infections using checkerboard DNA-DNA hybridization. Oral Microbiol Immunol 22: 390-397.
– reference: Navazesh M, Mulligan R, Pogoda J et al (2005). The effect of HAART on salivary microbiota in the Women's Interagency HIV Study (WIHS). Oral Surg Oral Med Oral Pathol Oral Radiol Endod 100: 701-708.
– reference: Tsang CS, Samaranayake LP (2001). Predominant cultivable subgingival microbiota of healthy and HIV-infected ethnic Chinese. APMIS 109: 117-126.
– reference: Feinberg AP, Vogelstein B (1983). A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132: 6-13.
– reference: Scully C, Porter SR, Mutlu S, Epstein JB, Glover S, Kumar N (1999). Periodontopathic bacteria in English HIV-seropositive persons. AIDS Patient Care STDS 13: 369-374.
– reference: Scannapieco FA, Rethman MP (2003). The relationship between periodontal diseases and respiratory diseases. Dent Today 22: 79-83.
– reference: Alley BS, Buchanan TH, Eleazer PD (2008). Comparison of the success of root canal therapy in HIV/AIDS patients and non-infected controls. Gen Dent 56: 155-157.
– reference: Chavez de Paz LE, Molander A, Dahlen G (2004). Gram-positive rods prevailing in teeth with apical periodontitis undergoing root canal treatment. Int Endod J 37: 579-587.
– reference: Scannapieco FA, Bush RB, Paju S (2003). Associations between periodontal disease and risk for nosocomial bacterial pneumonia and chronic obstructive pulmonary disease. A systematic review. Ann Periodontol 8: 54-69.
– reference: Lizardi PM, Huang X, Zhu Z, Bray-Ward P, Thomas DC, Ward DC (1998). Mutation detection and single-molecule counting using isothermal rolling-circle amplification. Nat Genet 19: 225-232.
– reference: Gao J, Li Y, Wang Q, Qi C, Zhu S (2011). Correlation between distribution of Helicobacter pylori in oral cavity and chronic stomach conditions. J Huazhong Univ Sci Technolog Med Sci 31: 409-412.
– reference: Socransky SS, Haffajee AD, Cugini MA, Smith C, Kent RL Jr (1998). Microbial complexes in subgingival plaque. J Clin Periodontol 25: 134-144.
– reference: Socransky SS, Haffajee AD, Smith C et al (2004). Use of checkerboard DNA-DNA hybridization to study complex microbial ecosystems. Oral Microbiol Immunol 19: 352-362.
– year: 2011
– volume: 17
  start-page: 348
  year: 2008
  end-page: 356
  article-title: Biofilms in the edentulous oral cavity
  publication-title: J Prosthodont
– volume: 57
  start-page: 637
  year: 2004
  end-page: 640
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Snippet Oral Diseases (2012) 18, 558–567 Objective:  To compare the microbiota of endodontic infections in necrotic pulp from HIV‐negative and HIV‐positive subjects....
Oral Diseases (2012) 18, 558–567 Objective:  To compare the microbiota of endodontic infections in necrotic pulp from HIV‐negative and HIV‐positive subjects....
To compare the microbiota of endodontic infections in necrotic pulp from HIV-negative and HIV-positive subjects. Root canal samples from necrotic pulp were...
Oral Diseases (2012) 18, 558-567 Objective: To compare the microbiota of endodontic infections in necrotic pulp from HIV-negative and HIV-positive subjects....
To compare the microbiota of endodontic infections in necrotic pulp from HIV-negative and HIV-positive subjects.OBJECTIVETo compare the microbiota of...
Objective: To compare the microbiota of endodontic infections in necrotic pulp from HIV-negative and HIV-positive subjects. Materials and Methods: Root canal...
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StartPage 558
SubjectTerms Actinomyces - isolation & purification
Actinomyces meyeri
Adolescent
Adult
Bacteria - classification
Bacteriology
Bacteroides fragilis
Bacteroides fragilis - isolation & purification
Candida albicans - isolation & purification
checkerboard
Child
Corynebacterium
Corynebacterium diphtheriae
Corynebacterium diphtheriae - isolation & purification
Dental pulp
Dental Pulp Cavity - microbiology
Dental Pulp Necrosis - microbiology
Deoxyribonucleic acid
Diphtheria
DNA
DNA Probes
endodontic infections
Female
Gram-Negative Anaerobic Straight, Curved, and Helical Rods - classification
Helicobacter pylori
HIV Seronegativity
HIV Seropositivity - microbiology
HIV-positive patients
Human immunodeficiency virus
Humans
Infection
Male
MDA
Middle Aged
Nucleic Acid Amplification Techniques
Nucleic Acid Hybridization - methods
Pathogens
Peptostreptococcus - isolation & purification
Porphyromonas gingivalis
Porphyromonas gingivalis - isolation & purification
Prevotella
Prevotella - classification
Prevotella nigrescens
Prevotella nigrescens - isolation & purification
root canals
Stenotrophomonas maltophilia
Stenotrophomonas maltophilia - isolation & purification
Streptococcus sobrinus
Streptococcus sobrinus - isolation & purification
Teeth
Veillonella - isolation & purification
Young Adult
Title Microbiologic profile of endodontic infections from HIV− and HIV+ patients using Multiple-Displacement Amplification and Checkerboard DNA-DNA Hybridization
URI https://api.istex.fr/ark:/67375/WNG-C1WPMKH8-D/fulltext.pdf
https://onlinelibrary.wiley.com/doi/abs/10.1111%2Fj.1601-0825.2012.01908.x
https://www.ncbi.nlm.nih.gov/pubmed/22335194
https://www.proquest.com/docview/1545165163
https://www.proquest.com/docview/1033454563
https://www.proquest.com/docview/1038609969
Volume 18
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