Bioinformatic analysis of abundant, gender-enriched transcripts of adult Ascaris suum (Nematoda) using a semi-automated workflow platform
Expressed sequence tag (EST) data representing transcripts with a high level of differential hybridization in suppressive-subtractive hybridization (SSH)-based microarray analysis between adult female and male Ascaris suum were subjected to detailed bioinformatic analysis. A total of 361 ESTs cluste...
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Published in | Molecular and cellular probes Vol. 23; no. 5; pp. 205 - 217 |
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Main Authors | , , , , , , , , , |
Format | Journal Article |
Language | English |
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Elsevier Ltd
01.10.2009
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Abstract | Expressed sequence tag (EST) data representing transcripts with a high level of differential hybridization in suppressive-subtractive hybridization (SSH)-based microarray analysis between adult female and male
Ascaris suum were subjected to detailed bioinformatic analysis. A total of 361 ESTs clustered into 209 sequences, of which 52 and 157 represented transcripts that were enriched in female and male
A. suum, respectively. Thirty (57.7%) of the ‘female’ subset of 52 sequences had orthologues/homologues in other parasitic nematodes and/or
Caenorhabditis elegans, 13 (25%) exclusively in other parasitic nematodes and nine (17.3%) had no match in any other organism for which sequence data are currently available; the
C. elegans orthologues encoded molecules involved in reproduction as well as embryonic and gamete development, such as vitellogenins and chitin-binding proteins. Of the ‘male’ subset of 157 sequences, 73 (46.5%) had orthologues/homologues in other parasitic nematodes and/or
C. elegans, 57 (37.5%) in other parasitic nematodes only, and 22 (14.5%) had no significant similarity match in any other organism; the
C. elegans orthologues encoded predominantly major sperm proteins (MSPs), kinases and phosphatases, actins, myosins and an
Ancylostoma secreted protein-like molecule. The findings of the present study should support further genomic investigations of
A. suum. |
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AbstractList | Expressed sequence tag (EST) data representing transcripts with a high level of differential hybridization in suppressive-subtractive hybridization (SSH)-based microarray analysis between adult female and male Ascaris suum were subjected to detailed bioinformatic analysis. A total of 361 ESTs clustered into 209 sequences, of which 52 and 157 represented transcripts that were enriched in female and male A. suum, respectively. Thirty (57.7%) of the 'female' subset of 52 sequences had orthologues/homologues in other parasitic nematodes and/or Caenorhabditis elegans, 13 (25%) exclusively in other parasitic nematodes and nine (17.3%) had no match in any other organism for which sequence data are currently available; the C. elegans orthologues encoded molecules involved in reproduction as well as embryonic and gamete development, such as vitellogenins and chitin-binding proteins. Of the 'male' subset of 157 sequences, 73 (46.5%) had orthologues/homologues in other parasitic nematodes and/or C. elegans, 57 (37.5%) in other parasitic nematodes only, and 22 (14.5%) had no significant similarity match in any other organism; the C. elegans orthologues encoded predominantly major sperm proteins (MSPs), kinases and phosphatases, actins, myosins and an Ancylostoma secreted protein-like molecule. The findings of the present study should support further genomic investigations of A. suum. Expressed sequence tag (EST) data representing transcripts with a high level of differential hybridization in suppressive-subtractive hybridization (SSH)-based microarray analysis between adult female and male Ascaris suum were subjected to detailed bioinformatic analysis. A total of 361 ESTs clustered into 209 sequences, of which 52 and 157 represented transcripts that were enriched in female and male A. suum, respectively. Thirty (57.7%) of the ‘female’ subset of 52 sequences had orthologues/homologues in other parasitic nematodes and/or Caenorhabditis elegans, 13 (25%) exclusively in other parasitic nematodes and nine (17.3%) had no match in any other organism for which sequence data are currently available; the C. elegans orthologues encoded molecules involved in reproduction as well as embryonic and gamete development, such as vitellogenins and chitin-binding proteins. Of the ‘male’ subset of 157 sequences, 73 (46.5%) had orthologues/homologues in other parasitic nematodes and/or C. elegans, 57 (37.5%) in other parasitic nematodes only, and 22 (14.5%) had no significant similarity match in any other organism; the C. elegans orthologues encoded predominantly major sperm proteins (MSPs), kinases and phosphatases, actins, myosins and an Ancylostoma secreted protein-like molecule. The findings of the present study should support further genomic investigations of A. suum. |
Author | Gasser, R.B. Zou, F.C. Zhong, W. Cantacessi, C. Hall, R.S. Sternberg, P.W. Ranganathan, S. Jex, A.R. Campbell, B.E. Zhu, X.Q. |
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Cites_doi | 10.1186/1471-2105-9-S1-S10 10.1017/S0031182006001521 10.1016/S0140-6736(06)68653-4 10.1371/journal.pntd.0000130 10.1016/j.molbiopara.2004.07.002 10.1371/journal.pntd.0000246 10.1016/S0020-7519(97)00208-7 10.1016/j.molbiopara.2005.11.003 10.1074/mcp.M800206-MCP200 10.1093/bioinformatics/bti430 10.1093/bioinformatics/bth088 10.1093/nar/gkh018 10.1093/nar/13.14.5283 10.1016/S0020-7519(02)00263-1 10.2307/3281369 10.1186/gb-2002-3-8-research0041 10.1016/j.ijpara.2007.07.001 10.1083/jcb.200603003 10.1016/S0965-1748(98)00123-4 10.1016/j.ijpara.2007.08.008 10.1126/science.282.5396.2041 10.1016/j.pt.2004.01.016 10.1016/S1471-4922(01)01986-9 10.1128/IAI.67.9.4771-4779.1999 10.1016/S1383-5769(02)00063-6 10.1016/j.pt.2004.12.002 10.1016/j.ijpara.2003.12.007 10.1126/science.1057586 10.1016/S0020-7519(03)00111-5 10.1126/science.1123287 10.1016/j.molbiopara.2005.05.005 10.1021/jm010066k 10.1093/bioinformatics/btf870 10.2527/jas1988.6661548x 10.1038/75556 10.1006/jmbi.2000.4315 10.1016/S0166-6851(02)00081-6 10.1093/bioinformatics/17.7.646 10.1093/nar/gkm259 10.1016/j.molbiopara.2004.03.014 10.1016/S1097-2765(00)00059-9 10.1111/j.1432-0436.2004.07202004.x 10.2174/1389557013407205 10.1016/S0065-308X(01)50031-7 10.1016/j.biotechadv.2007.01.008 10.1091/mbc.E03-04-0246 10.1016/j.vetpar.2007.05.008 10.1093/bib/bbl015 10.1002/bies.20161 10.1016/j.mcp.2006.02.002 10.1126/science.282.5396.2012 10.1017/S0031182006001727 10.1038/nature03353 10.1016/j.pt.2004.07.010 10.1016/j.exppara.2007.03.008 10.1074/jbc.271.12.6672 10.1101/gad.1028303 10.1371/journal.pbio.0000012 10.1016/S0020-7519(03)00159-0 10.1016/S0065-308X(01)48008-0 10.1083/jcb.149.1.7 10.1016/j.biotechadv.2009.02.005 10.1016/j.jmb.2004.05.028 10.1101/gr.9.9.868 10.1093/bioinformatics/bti610 10.1073/pnas.141004698 10.1016/j.ijpara.2003.09.012 10.1038/35888 10.1371/journal.pntd.0000326 10.1016/S1046-2023(03)00050-1 10.1091/mbc.E06-08-0741 10.1016/S1367-5931(00)00173-3 10.1093/protein/10.1.1 10.1128/IAI.73.4.1995-2004.2005 10.1017/S0031182005009728 10.1016/j.ijpara.2006.02.010 10.1016/S0074-7696(01)02002-2 10.1073/pnas.011520898 10.1016/j.ijpara.2003.10.013 10.1534/genetics.107.080689 |
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Keywords | Gene ontology Caenorhabditis elegans Genetic interactions Suppressive-subtractive hybridization Gender-enriched Ascaris suum Bioinformatics |
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References | Hu, Abs EL-Osta, Campbell, Boag, Nisbet, Beveridge (bib71) 2007; 117 Peng, Yuan, Hu, Gasser (bib31) 2007; 134 Wu, Zou, Weng, Song, Lin, Zhu (bib35) 2005; 38 Zhong, Sternberg (bib50) 2006; 311 Douvres, Urban (bib32) 1983; 69 Parkinson, Whitton, Schmid, Thomson, Blaxter (bib18) 2004; 32 Italiano, Stewart, Roberts (bib65) 2001; 202 Moertel, McManus, Piva, Young, McInnes, Gobert (bib77) 2006; 20 Visser, Van Zeveren, Meyvis, Peelaers, Van den Broeck, Gevaert (bib84) 2008; 38 Brandt, Zwaan, Beekman, Westendorp, Slagboom (bib55) 2005; 27 Reinke, Smith, Nance, Wang, Van Doren, Begley (bib15) 2000; 6 Kamath, Ahringer (bib10) 2003; 30 Aboobaker, Blaxter (bib23) 2004; 20 Li, Rush, Crosby, Warren, Williams, Mitreva (bib59) 2005; 143 Blaxter (bib17) 1998; 282 Olson, Bishop, Yates, Oegema, Esko (bib61) 2006; 173 Yi, Buttery, Stewart, Roberts (bib69) 2007; 18 Zhan, Liu, Badamchian, Williamson, Feng, Loukas (bib82) 2003; 33 Bürglin, Lobos, Blaxter (bib19) 1998; 28 McCluskey, Sakoff (bib73) 2001; 1 McCluskey, Sim, Sakoff (bib74) 2002; 45 Stewart, Hale (bib2) 1988; 66 Brooks, Isaac (bib21) 2002; 51 Huang, Madan (bib39) 1999; 9 Nagaraj, Gasser, Ranganathan (bib28) 2007; 8 Nielsen, Engelbrecht, Brunak, von Heijne (bib43) 1997; 10 Horton, Park, Obayashi, Fujita, Harada, Adams-Collier (bib49) 2007; 35 Jiang, Ryu, Kiraly, Duke, Reinke, Kim (bib16) 2001; 98 Hashmi, Tawe, Lustigman (bib20) 2001; 17 Simmer, Moorman, van der Linden, Kuijk, van den Berghe, Kamath (bib11) 2003; 1 Moreno, Geary (bib63) 2008; 2 Buttery, Ekman, Seavy, Stewart, Roberts (bib66) 2003; 14 Hoffmann, Johnston, Dunne (bib75) 2002; 3 Boag, Newton, Gasser (bib4) 2001; 50 Bethony, Brooker, Albonico, Geiger, Loukas, Diemert (bib1) 2006; 367 Boyle, Yoshino (bib22) 2003; 33 Wolstenholme, Fairweather, Prichard, von Samson-Himmelstjerna, Sangster (bib3) 2004; 20 (bib8) 1998; 282 Huang, Gasser, Cantacessi, Nisbet, Zhong, Sternberg (bib37) 2008; 2 Gao, Raikar, Davenport, Mutapcic, Montgomery, Kuzmin (bib34) 2006; 146 Michalski, Monsey, Cistola, Weil (bib57) 2002; 124 Miller, Nguyen, Lee, Kosinski, Schedl, Caprioli (bib67) 2001; 291 Tetteh, Loukas, Tripp, Maizels (bib79) 1999; 67 Sugimoto (bib12) 2004; 72 Mulvenna, Hamilton, Nagaraj, Smyth, Loukas, Gorman (bib83) 2009; 8 Gasser, Cottee, Nisbet, Ruttkowski, Ranganathan, Joachim (bib7) 2007; 25 Fitzpatrick, Johansen, Johnston, Dunne, Hoffmann (bib76) 2004; 136 Nikolaou, Gasser (bib6) 2006; 134 Parkinson, Blaxter (bib40) 2003; 19 Li, Rush, Tan, Weil (bib58) 2004; 137 Tellam, Wijffels, Willadsen (bib60) 1999; 29 Roberts, Stewart (bib64) 2000; 149 Sonnichsen, Koski, Walsh, Marschall, Neumann, Brehm (bib13) 2005; 434 Nisbet, Gasser (bib38) 2004; 34 Miller, Ruest, Kosinski, Hanks, Greenstein (bib68) 2003; 17 Ashburner, Ball, Blake, Botstein, Butler, Cherry (bib52) 2000; 25 Parkinson, Blaxter (bib85) 2003; 19 Britton, Murray (bib26) 2006; 36 Beissbarth, Speed (bib53) 2004; 20 Nielsen, Krogh (bib44) 1998 Datu, Gasser, Nagaraj, Ong, O'Donoghue, McInnes (bib81) 2008; 2 Boag, Ren, Newton, Gasser (bib70) 2003; 33 Mao, Cai, Olyarchuk, Wei (bib42) 2005; 21 Cottee, Nisbet, Abs EL-Osta, Webster, Gasser (bib56) 2006; 132 Zou, Wu, Liao, Lin, Li, Song (bib36) 2006; 37 Nisbet, Cottee, Gasser (bib5) 2004; 34 Spieth, Denison, Kirtland, Cane, Blumenthal (bib54) 1985; 13 Nagaraj, Gasser, Nisbet, Ranganathan (bib29) 2008; 9 Islam, Miyoshi, Yamada, Tsuji (bib33) 2005; 73 Foster, Zhang, Kumar, Carlow (bib25) 2005; 21 Cantacessi, Campbell, Visser, Geldhof, Nolan, Nisbet (bib78) 2009; 27 Krogh, Larsson, von Heijne, Sonnhammer (bib47) 2001; 305 Conesa, Götz, García-Gómez, Terol, Talón, Robles (bib41) 2005; 21 Sonnhammer, von Heijne, Krogh (bib46) 1998 Moller, Croning, Apweiler (bib48) 2001; 17 Crompton (bib30) 2001; 48 Barstead (bib9) 2001; 5 Knox (bib24) 2004; 34 Bendtsen, Nielsen, von Heijne, Brunak (bib45) 2004; 340 Hanazawa, Mochii, Ueno, Kohara, Iino (bib72) 2001; 98 Mitreva, Zarlenga, McCarter, Jasmer (bib27) 2007; 148 Currie, King, Lawrenson, Schroeder, Kershner, Hermann (bib62) 2007; 177 Campbell, Nagaraj, Hu, Zhong, Sternberg, Ong (bib51) 2008; 38 Fire, Xu, Montgomery, Kostas, Driver (bib14) 1998; 391 Hawdon, Jones, Hoffman, Hotez (bib80) 1996; 271 Roberts (10.1016/j.mcp.2009.03.003_bib64) 2000; 149 Hashmi (10.1016/j.mcp.2009.03.003_bib20) 2001; 17 Brooks (10.1016/j.mcp.2009.03.003_bib21) 2002; 51 Cottee (10.1016/j.mcp.2009.03.003_bib56) 2006; 132 Cantacessi (10.1016/j.mcp.2009.03.003_bib78) 2009; 27 Stewart (10.1016/j.mcp.2009.03.003_bib2) 1988; 66 Nielsen (10.1016/j.mcp.2009.03.003_bib44) 1998 Zhong (10.1016/j.mcp.2009.03.003_bib50) 2006; 311 Olson (10.1016/j.mcp.2009.03.003_bib61) 2006; 173 Hawdon (10.1016/j.mcp.2009.03.003_bib80) 1996; 271 Sugimoto (10.1016/j.mcp.2009.03.003_bib12) 2004; 72 Hu (10.1016/j.mcp.2009.03.003_bib71) 2007; 117 Hoffmann (10.1016/j.mcp.2009.03.003_bib75) 2002; 3 Moertel (10.1016/j.mcp.2009.03.003_bib77) 2006; 20 Nielsen (10.1016/j.mcp.2009.03.003_bib43) 1997; 10 Fire (10.1016/j.mcp.2009.03.003_bib14) 1998; 391 Nisbet (10.1016/j.mcp.2009.03.003_bib38) 2004; 34 Barstead (10.1016/j.mcp.2009.03.003_bib9) 2001; 5 Hanazawa (10.1016/j.mcp.2009.03.003_bib72) 2001; 98 Crompton (10.1016/j.mcp.2009.03.003_bib30) 2001; 48 Huang (10.1016/j.mcp.2009.03.003_bib39) 1999; 9 Datu (10.1016/j.mcp.2009.03.003_bib81) 2008; 2 Mitreva (10.1016/j.mcp.2009.03.003_bib27) 2007; 148 Nagaraj (10.1016/j.mcp.2009.03.003_bib29) 2008; 9 Yi (10.1016/j.mcp.2009.03.003_bib69) 2007; 18 Huang (10.1016/j.mcp.2009.03.003_bib37) 2008; 2 Li (10.1016/j.mcp.2009.03.003_bib58) 2004; 137 Li (10.1016/j.mcp.2009.03.003_bib59) 2005; 143 Michalski (10.1016/j.mcp.2009.03.003_bib57) 2002; 124 Moller (10.1016/j.mcp.2009.03.003_bib48) 2001; 17 Sonnhammer (10.1016/j.mcp.2009.03.003_bib46) 1998 Mao (10.1016/j.mcp.2009.03.003_bib42) 2005; 21 Nikolaou (10.1016/j.mcp.2009.03.003_bib6) 2006; 134 McCluskey (10.1016/j.mcp.2009.03.003_bib74) 2002; 45 Reinke (10.1016/j.mcp.2009.03.003_bib15) 2000; 6 Buttery (10.1016/j.mcp.2009.03.003_bib66) 2003; 14 Jiang (10.1016/j.mcp.2009.03.003_bib16) 2001; 98 Moreno (10.1016/j.mcp.2009.03.003_bib63) 2008; 2 Brandt (10.1016/j.mcp.2009.03.003_bib55) 2005; 27 Currie (10.1016/j.mcp.2009.03.003_bib62) 2007; 177 Blaxter (10.1016/j.mcp.2009.03.003_bib17) 1998; 282 Zou (10.1016/j.mcp.2009.03.003_bib36) 2006; 37 Conesa (10.1016/j.mcp.2009.03.003_bib41) 2005; 21 Sonnichsen (10.1016/j.mcp.2009.03.003_bib13) 2005; 434 Mulvenna (10.1016/j.mcp.2009.03.003_bib83) 2009; 8 Spieth (10.1016/j.mcp.2009.03.003_bib54) 1985; 13 Knox (10.1016/j.mcp.2009.03.003_bib24) 2004; 34 Britton (10.1016/j.mcp.2009.03.003_bib26) 2006; 36 Italiano (10.1016/j.mcp.2009.03.003_bib65) 2001; 202 Foster (10.1016/j.mcp.2009.03.003_bib25) 2005; 21 Wolstenholme (10.1016/j.mcp.2009.03.003_bib3) 2004; 20 McCluskey (10.1016/j.mcp.2009.03.003_bib73) 2001; 1 Gao (10.1016/j.mcp.2009.03.003_bib34) 2006; 146 Tellam (10.1016/j.mcp.2009.03.003_bib60) 1999; 29 Parkinson (10.1016/j.mcp.2009.03.003_bib18) 2004; 32 Bendtsen (10.1016/j.mcp.2009.03.003_bib45) 2004; 340 Peng (10.1016/j.mcp.2009.03.003_bib31) 2007; 134 Kamath (10.1016/j.mcp.2009.03.003_bib10) 2003; 30 Gasser (10.1016/j.mcp.2009.03.003_bib7) 2007; 25 Parkinson (10.1016/j.mcp.2009.03.003_bib40) 2003; 19 Horton (10.1016/j.mcp.2009.03.003_bib49) 2007; 35 Boag (10.1016/j.mcp.2009.03.003_bib70) 2003; 33 Parkinson (10.1016/j.mcp.2009.03.003_bib85) 2003; 19 Bürglin (10.1016/j.mcp.2009.03.003_bib19) 1998; 28 Nagaraj (10.1016/j.mcp.2009.03.003_bib28) 2007; 8 Ashburner (10.1016/j.mcp.2009.03.003_bib52) 2000; 25 Fitzpatrick (10.1016/j.mcp.2009.03.003_bib76) 2004; 136 Visser (10.1016/j.mcp.2009.03.003_bib84) 2008; 38 Simmer (10.1016/j.mcp.2009.03.003_bib11) 2003; 1 Boyle (10.1016/j.mcp.2009.03.003_bib22) 2003; 33 (10.1016/j.mcp.2009.03.003_bib8) 1998; 282 Miller (10.1016/j.mcp.2009.03.003_bib67) 2001; 291 Tetteh (10.1016/j.mcp.2009.03.003_bib79) 1999; 67 Zhan (10.1016/j.mcp.2009.03.003_bib82) 2003; 33 Beissbarth (10.1016/j.mcp.2009.03.003_bib53) 2004; 20 Islam (10.1016/j.mcp.2009.03.003_bib33) 2005; 73 Miller (10.1016/j.mcp.2009.03.003_bib68) 2003; 17 Boag (10.1016/j.mcp.2009.03.003_bib4) 2001; 50 Wu (10.1016/j.mcp.2009.03.003_bib35) 2005; 38 Campbell (10.1016/j.mcp.2009.03.003_bib51) 2008; 38 Douvres (10.1016/j.mcp.2009.03.003_bib32) 1983; 69 Bethony (10.1016/j.mcp.2009.03.003_bib1) 2006; 367 Aboobaker (10.1016/j.mcp.2009.03.003_bib23) 2004; 20 Krogh (10.1016/j.mcp.2009.03.003_bib47) 2001; 305 Nisbet (10.1016/j.mcp.2009.03.003_bib5) 2004; 34 |
References_xml | – volume: 35 start-page: W585 year: 2007 end-page: W587 ident: bib49 article-title: WoLF PSORT: protein localization predictor publication-title: Nucleic Acids Res contributor: fullname: Adams-Collier – volume: 148 start-page: 31 year: 2007 end-page: 42 ident: bib27 article-title: Parasitic nematodes – from genomes to control publication-title: Vet Parasitol contributor: fullname: Jasmer – volume: 391 start-page: 806 year: 1998 end-page: 811 ident: bib14 article-title: Potent and specific genetic interference by double-stranded RNA in publication-title: Nature contributor: fullname: Driver – volume: 136 start-page: 191 year: 2004 end-page: 209 ident: bib76 article-title: Gender-associated gene expression in two related strains of publication-title: Mol Biochem Parasitol contributor: fullname: Hoffmann – volume: 20 start-page: 178 year: 2004 end-page: 184 ident: bib23 article-title: Functional genomics for parasitic nematodes and platyhelminths publication-title: Trends Parasitol contributor: fullname: Blaxter – volume: 134 start-page: 325 year: 2007 end-page: 330 ident: bib31 article-title: Recent insights into the epidemiology and genetics of publication-title: Parasitology contributor: fullname: Gasser – volume: 6 start-page: 605 year: 2000 end-page: 616 ident: bib15 article-title: A global profile of germline gene expression in publication-title: Mol Cell contributor: fullname: Begley – volume: 73 start-page: 1995 year: 2005 end-page: 2004 ident: bib33 article-title: Pyrophosphatase of the roundworm publication-title: Infect Immun contributor: fullname: Tsuji – volume: 173 start-page: 985 year: 2006 end-page: 994 ident: bib61 article-title: Identification of novel chondroitin proteoglycans in publication-title: J Cell Biol contributor: fullname: Esko – volume: 34 start-page: 633 year: 2004 end-page: 643 ident: bib38 article-title: Profiling of gender-specific gene expression for publication-title: Int J Parasitol contributor: fullname: Gasser – volume: 17 start-page: 387 year: 2001 end-page: 393 ident: bib20 article-title: publication-title: Trends Parasitol contributor: fullname: Lustigman – volume: 21 start-page: 3674 year: 2005 end-page: 3676 ident: bib41 article-title: Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research publication-title: Bioinformatics contributor: fullname: Robles – volume: 149 start-page: 7 year: 2000 end-page: 12 ident: bib64 article-title: Acting like actin. The dynamics of the nematode major sperm protein ( publication-title: J Cell Biol contributor: fullname: Stewart – volume: 30 start-page: 313 year: 2003 end-page: 321 ident: bib10 article-title: Genome-wide RNAi screening in publication-title: Methods contributor: fullname: Ahringer – volume: 2 start-page: e326 year: 2008 ident: bib63 article-title: Stage- and gender-specific proteomic analysis of publication-title: PLoS Negl Trop Dis contributor: fullname: Geary – volume: 18 start-page: 1816 year: 2007 end-page: 1825 ident: bib69 article-title: A Ser/Thr kinase required for membrane-associated assembly of the major sperm protein motility apparatus in the amoeboid sperm of publication-title: Mol Biol Cell contributor: fullname: Roberts – volume: 25 start-page: 25 year: 2000 end-page: 29 ident: bib52 article-title: Gene ontology: tool for the unification of biology. The gene ontology consortium publication-title: Nat Genet contributor: fullname: Cherry – volume: 20 start-page: 1464 year: 2004 end-page: 1465 ident: bib53 article-title: GOstat: find statistically overrepresented Gene Ontologies within a group of genes publication-title: Bioinformatics contributor: fullname: Speed – volume: 271 start-page: 6672 year: 1996 end-page: 6678 ident: bib80 article-title: Cloning and characterization of publication-title: J Biol Chem contributor: fullname: Hotez – volume: 98 start-page: 218 year: 2001 end-page: 223 ident: bib16 article-title: Genome-wide analysis of developmental and sex-regulated gene expression profiles in publication-title: Proc Natl Acad Sci U S A contributor: fullname: Kim – volume: 8 start-page: 6 year: 2007 end-page: 21 ident: bib28 article-title: A hitchhiker's guide to expressed sequence tag (EST) analysis publication-title: Brief Bioinform contributor: fullname: Ranganathan – volume: 311 start-page: 1481 year: 2006 end-page: 1484 ident: bib50 article-title: Genome-wide prediction of publication-title: Science contributor: fullname: Sternberg – volume: 1 start-page: 43 year: 2001 end-page: 55 ident: bib73 article-title: Small molecule inhibitors of serine/threonine phosphatases publication-title: Mini Rev Med Chem contributor: fullname: Sakoff – volume: 32 start-page: D427 year: 2004 end-page: D430 ident: bib18 article-title: NEMBASE: a resource for parasitic nematode ESTs publication-title: Nucleic Acids Res contributor: fullname: Blaxter – volume: 2 start-page: e246 year: 2008 ident: bib37 article-title: Genomic-bioinformatic analysis of transcripts enriched in the third-stage larva of the parasitic nematode publication-title: PLoS Negl Trop Dis contributor: fullname: Sternberg – volume: 27 start-page: 376 year: 2009 end-page: 388 ident: bib78 article-title: A portrait of the “SCP/TAPS” proteins of eukaryotes – developing a framework for fundamental research and biotechnological outcomes publication-title: Biotechnol Adv contributor: fullname: Nisbet – volume: 37 start-page: 163 year: 2006 end-page: 167 ident: bib36 article-title: Profiling and identification of gender-specific expressed genes in publication-title: Acta Veterinaria and Zootechnica Sinica contributor: fullname: Song – volume: 202 start-page: 1 year: 2001 end-page: 34 ident: bib65 article-title: How the assembly dynamics of the nematode major sperm protein generate amoeboid cell motility publication-title: Int Rev Cytol contributor: fullname: Roberts – volume: 34 start-page: 139 year: 2004 end-page: 152 ident: bib24 article-title: Technological advances and genomics in metazoan parasites publication-title: Int J Parasitol contributor: fullname: Knox – volume: 34 start-page: 125 year: 2004 end-page: 138 ident: bib5 article-title: Molecular biology of reproduction and development in parasitic nematodes: progress and opportunities publication-title: Int J Parasitol contributor: fullname: Gasser – start-page: 122 year: 1998 end-page: 130 ident: bib44 article-title: Prediction of signal peptides and signal anchors by a hidden Markov model publication-title: Proceedings of the sixth international conference on Intelligent Systems for Molecular Biology (ISMB 6) contributor: fullname: Krogh – volume: 69 start-page: 549 year: 1983 end-page: 558 ident: bib32 article-title: Factors contributing to the in vitro development of publication-title: J Parasitol contributor: fullname: Urban – volume: 10 start-page: 1 year: 1997 end-page: 6 ident: bib43 article-title: Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites publication-title: Prot Eng contributor: fullname: von Heijne – volume: 340 start-page: 783 year: 2004 end-page: 795 ident: bib45 article-title: Improved prediction of signal peptides: signal P 3.0 publication-title: J Mol Biol contributor: fullname: Brunak – volume: 2 start-page: e130 year: 2008 ident: bib81 article-title: Transcriptional changes in the hookworm, publication-title: PLoS Negl Trop Dis contributor: fullname: McInnes – volume: 21 start-page: 101 year: 2005 end-page: 104 ident: bib25 article-title: Mining nematode genome data for novel drug targets publication-title: Trends Parasitol contributor: fullname: Carlow – volume: 38 start-page: 1040 year: 2005 end-page: 1045 ident: bib35 article-title: Profiling of gender-specific gene expression for publication-title: Scientia Agricultura Sinica contributor: fullname: Zhu – volume: 291 start-page: 2144 year: 2001 end-page: 2147 ident: bib67 article-title: A sperm cytoskeletal protein that signals oocyte meiotic maturation and ovulation publication-title: Science contributor: fullname: Caprioli – volume: 9 start-page: 868 year: 1999 end-page: 877 ident: bib39 article-title: CAP3: a DNA sequence assembly program publication-title: Genome Res contributor: fullname: Madan – volume: 66 start-page: 1548 year: 1988 end-page: 1554 ident: bib2 article-title: Losses to internal parasites in swine production publication-title: J Anim Sci contributor: fullname: Hale – volume: 13 start-page: 5283 year: 1985 end-page: 5295 ident: bib54 article-title: The publication-title: Nucleic Acids Res contributor: fullname: Blumenthal – volume: 14 start-page: 5082 year: 2003 end-page: 5088 ident: bib66 article-title: Dissection of the publication-title: Mol Biol Cell contributor: fullname: Roberts – volume: 282 start-page: 2041 year: 1998 end-page: 2046 ident: bib17 article-title: publication-title: Science contributor: fullname: Blaxter – volume: 38 start-page: 455 year: 2008 end-page: 465 ident: bib84 article-title: Gender-enriched transcription of activation associated secreted proteins in publication-title: Int J Parasitol contributor: fullname: Gevaert – start-page: 175 year: 1998 end-page: 182 ident: bib46 article-title: A hidden Markov model for predicting transmembrane helices in protein sequences publication-title: Proceedings of the sixth international conference on Intelligent Systems for Molecular Biology contributor: fullname: Krogh – volume: 434 start-page: 462 year: 2005 end-page: 469 ident: bib13 article-title: Full-genome RNAi profiling of early embryogenesis in publication-title: Nature contributor: fullname: Brehm – volume: 19 start-page: 390 year: 2003 end-page: 395 ident: bib40 article-title: SimiTri–visualizing similarity relationships for groups of sequences publication-title: Bioinformatics contributor: fullname: Blaxter – volume: 137 start-page: 329 year: 2004 end-page: 337 ident: bib58 article-title: Quantitative analysis of gender-regulated transcripts in the filarial nematode publication-title: Mol Biochem Parasitol contributor: fullname: Weil – volume: 51 start-page: 319 year: 2002 end-page: 325 ident: bib21 article-title: Functional genomics of parasitic worms: the dawn of a new era publication-title: Parasitol Int contributor: fullname: Isaac – volume: 48 start-page: 285 year: 2001 end-page: 375 ident: bib30 article-title: publication-title: Adv Parasitol contributor: fullname: Crompton – volume: 146 start-page: 124 year: 2006 end-page: 128 ident: bib34 article-title: Cross-species RNAi: selected publication-title: Mol Biochem Parasitol contributor: fullname: Kuzmin – volume: 3 start-page: R0041 year: 2002 ident: bib75 article-title: Identification of publication-title: Genome Biol contributor: fullname: Dunne – volume: 134 start-page: 461 year: 2006 end-page: 482 ident: bib6 article-title: Extending from PARs in publication-title: Parasitology contributor: fullname: Gasser – volume: 20 start-page: 280 year: 2006 end-page: 289 ident: bib77 article-title: Oligonucleotide microarray analysis of strain- and gender-associated gene expression in the human blood fluke, publication-title: Mol Cell Probes contributor: fullname: Gobert – volume: 50 start-page: 153 year: 2001 end-page: 198 ident: bib4 article-title: Molecular aspects of sexual development and reproduction in nematodes and schistosomes publication-title: Adv Parasitol contributor: fullname: Gasser – volume: 17 start-page: 187 year: 2003 end-page: 200 ident: bib68 article-title: An Eph receptor sperm-sensing control mechanism for oocyte meiotic maturation in publication-title: Genes Dev contributor: fullname: Greenstein – volume: 72 start-page: 81 year: 2004 end-page: 91 ident: bib12 article-title: High-throughput RNAi in publication-title: Differentiation contributor: fullname: Sugimoto – volume: 27 start-page: 339 year: 2005 end-page: 346 ident: bib55 article-title: Shuttling between species for pathways of lifespan regulation: a central role for the vitellogenin gene family? publication-title: Bioessays contributor: fullname: Slagboom – volume: 17 start-page: 646 year: 2001 end-page: 653 ident: bib48 article-title: Evaluation of methods for the prediction of membrane spanning regions publication-title: Bioinformatics contributor: fullname: Apweiler – volume: 124 start-page: 1 year: 2002 end-page: 10 ident: bib57 article-title: An embryo-associated fatty acid-binding protein in the filarial nematode publication-title: Mol Biochem Parasitol contributor: fullname: Weil – volume: 98 start-page: 8686 year: 2001 end-page: 8691 ident: bib72 article-title: Use of cDNA subtraction and RNA interference screens in combination reveals genes required for germ-line development in publication-title: Proc Natl Acad Sci U S A contributor: fullname: Iino – volume: 67 start-page: 4771 year: 1999 end-page: 4779 ident: bib79 article-title: Identification of abundantly expressed novel and conserved genes from the infective larval stage of publication-title: Infect Immun contributor: fullname: Maizels – volume: 33 start-page: 313 year: 2003 end-page: 325 ident: bib70 article-title: Molecular characterisation of a male-specific serine/threonine phosphatase from publication-title: Int J Parasitol contributor: fullname: Gasser – volume: 177 start-page: 1569 year: 2007 end-page: 1582 ident: bib62 article-title: Role of the publication-title: Genetics contributor: fullname: Hermann – volume: 19 start-page: 390 year: 2003 end-page: 395 ident: bib85 article-title: SimiTri – visualizing similarity relationships for groups of sequences publication-title: Bioinformatics contributor: fullname: Blaxter – volume: 282 start-page: 2012 year: 1998 end-page: 2018 ident: bib8 article-title: The publication-title: Science – volume: 8 start-page: 109 year: 2009 end-page: 121 ident: bib83 article-title: Proteomic analysis of the excretory/secretory component of the blood-feeding stage of the hookworm, publication-title: Mol Cell Proteomics contributor: fullname: Gorman – volume: 132 start-page: 691 year: 2006 end-page: 708 ident: bib56 article-title: Construction of gender-enriched cDNA archives for adult publication-title: Parasitology contributor: fullname: Gasser – volume: 28 start-page: 395 year: 1998 end-page: 411 ident: bib19 article-title: publication-title: Int J Parasitol contributor: fullname: Blaxter – volume: 36 start-page: 651 year: 2006 end-page: 659 ident: bib26 article-title: Using publication-title: Int J Parasitol contributor: fullname: Murray – volume: 305 start-page: 567 year: 2001 end-page: 580 ident: bib47 article-title: Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes publication-title: J Mol Biol contributor: fullname: Sonnhammer – volume: 1 start-page: E12 year: 2003 ident: bib11 article-title: Genome-wide RNAi of publication-title: PLoS Biol contributor: fullname: Kamath – volume: 38 start-page: 65 year: 2008 end-page: 83 ident: bib51 article-title: Gender-enriched transcripts in publication-title: Int J Parasitol contributor: fullname: Ong – volume: 20 start-page: 469 year: 2004 end-page: 476 ident: bib3 article-title: Drug resistance in veterinary helminths publication-title: Trends Parasitol contributor: fullname: Sangster – volume: 5 start-page: 63 year: 2001 end-page: 66 ident: bib9 article-title: Genome-wide RNAi publication-title: Curr Opin Chem Biol contributor: fullname: Barstead – volume: 117 start-page: 22 year: 2007 end-page: 34 ident: bib71 article-title: publication-title: Exp Parasitol contributor: fullname: Beveridge – volume: 367 start-page: 1521 year: 2006 end-page: 1532 ident: bib1 article-title: Soil-transmitted helminth infections: ascariasis, trichuriasis, and hookworm publication-title: Lancet contributor: fullname: Diemert – volume: 21 start-page: 3787 year: 2005 end-page: 3793 ident: bib42 article-title: Automated genome annotation and pathway identification using the KEGG orthology (KO) as a controlled vocabulary publication-title: Bioinformatics contributor: fullname: Wei – volume: 33 start-page: 897 year: 2003 end-page: 907 ident: bib82 article-title: Molecular characterisation of the publication-title: Int J Parasitol contributor: fullname: Loukas – volume: 143 start-page: 49 year: 2005 end-page: 57 ident: bib59 article-title: Profiling of gender-regulated gene transcripts in the filarial nematode publication-title: Mol Biochem Parasitol contributor: fullname: Mitreva – volume: 33 start-page: 1259 year: 2003 end-page: 1268 ident: bib22 article-title: Gene manipulation in parasitic helminths publication-title: Int J Parasitol contributor: fullname: Yoshino – volume: 9 start-page: S10 year: 2008 ident: bib29 article-title: publication-title: BMC Bioinformatics contributor: fullname: Ranganathan – volume: 25 start-page: 281 year: 2007 end-page: 293 ident: bib7 article-title: publication-title: Biotechnol Adv contributor: fullname: Joachim – volume: 29 start-page: 87 year: 1999 end-page: 101 ident: bib60 article-title: Peritrophic matrix proteins publication-title: Insect Biochem Mol Biol contributor: fullname: Willadsen – volume: 45 start-page: 1151 year: 2002 end-page: 1175 ident: bib74 article-title: Serine/threonine protein phosphatase inhibitors: development of potential therapeutic strategies publication-title: J Med Chem contributor: fullname: Sakoff – volume: 9 start-page: S10 year: 2008 ident: 10.1016/j.mcp.2009.03.003_bib29 article-title: In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches publication-title: BMC Bioinformatics doi: 10.1186/1471-2105-9-S1-S10 contributor: fullname: Nagaraj – volume: 37 start-page: 163 year: 2006 ident: 10.1016/j.mcp.2009.03.003_bib36 article-title: Profiling and identification of gender-specific expressed genes in Ascaris suum by cDNA microarray analysis publication-title: Acta Veterinaria and Zootechnica Sinica contributor: fullname: Zou – volume: 134 start-page: 325 year: 2007 ident: 10.1016/j.mcp.2009.03.003_bib31 article-title: Recent insights into the epidemiology and genetics of Ascaris in China using molecular tools publication-title: Parasitology doi: 10.1017/S0031182006001521 contributor: fullname: Peng – volume: 367 start-page: 1521 year: 2006 ident: 10.1016/j.mcp.2009.03.003_bib1 article-title: Soil-transmitted helminth infections: ascariasis, trichuriasis, and hookworm publication-title: Lancet doi: 10.1016/S0140-6736(06)68653-4 contributor: fullname: Bethony – volume: 2 start-page: e130 year: 2008 ident: 10.1016/j.mcp.2009.03.003_bib81 article-title: Transcriptional changes in the hookworm, Ancylostoma caninum, during the transition from a free-living to a parasitic larva publication-title: PLoS Negl Trop Dis doi: 10.1371/journal.pntd.0000130 contributor: fullname: Datu – volume: 137 start-page: 329 year: 2004 ident: 10.1016/j.mcp.2009.03.003_bib58 article-title: Quantitative analysis of gender-regulated transcripts in the filarial nematode Brugia malayi by real-time RT-PCR publication-title: Mol Biochem Parasitol doi: 10.1016/j.molbiopara.2004.07.002 contributor: fullname: Li – volume: 2 start-page: e246 year: 2008 ident: 10.1016/j.mcp.2009.03.003_bib37 article-title: Genomic-bioinformatic analysis of transcripts enriched in the third-stage larva of the parasitic nematode Ascaris suum publication-title: PLoS Negl Trop Dis doi: 10.1371/journal.pntd.0000246 contributor: fullname: Huang – volume: 28 start-page: 395 year: 1998 ident: 10.1016/j.mcp.2009.03.003_bib19 article-title: Caenorhabditis elegans as a model for parasitic nematodes publication-title: Int J Parasitol doi: 10.1016/S0020-7519(97)00208-7 contributor: fullname: Bürglin – volume: 38 start-page: 1040 year: 2005 ident: 10.1016/j.mcp.2009.03.003_bib35 article-title: Profiling of gender-specific gene expression for Ascaris suum by suppression subtractive hybridization publication-title: Scientia Agricultura Sinica contributor: fullname: Wu – volume: 146 start-page: 124 year: 2006 ident: 10.1016/j.mcp.2009.03.003_bib34 article-title: Cross-species RNAi: selected Ascaris suum dsRNAs can sterilize Caenorhabditis elegans publication-title: Mol Biochem Parasitol doi: 10.1016/j.molbiopara.2005.11.003 contributor: fullname: Gao – volume: 8 start-page: 109 year: 2009 ident: 10.1016/j.mcp.2009.03.003_bib83 article-title: Proteomic analysis of the excretory/secretory component of the blood-feeding stage of the hookworm, Ancylostoma caninum publication-title: Mol Cell Proteomics doi: 10.1074/mcp.M800206-MCP200 contributor: fullname: Mulvenna – volume: 21 start-page: 3787 year: 2005 ident: 10.1016/j.mcp.2009.03.003_bib42 article-title: Automated genome annotation and pathway identification using the KEGG orthology (KO) as a controlled vocabulary publication-title: Bioinformatics doi: 10.1093/bioinformatics/bti430 contributor: fullname: Mao – volume: 20 start-page: 1464 year: 2004 ident: 10.1016/j.mcp.2009.03.003_bib53 article-title: GOstat: find statistically overrepresented Gene Ontologies within a group of genes publication-title: Bioinformatics doi: 10.1093/bioinformatics/bth088 contributor: fullname: Beissbarth – volume: 32 start-page: D427 year: 2004 ident: 10.1016/j.mcp.2009.03.003_bib18 article-title: NEMBASE: a resource for parasitic nematode ESTs publication-title: Nucleic Acids Res doi: 10.1093/nar/gkh018 contributor: fullname: Parkinson – volume: 13 start-page: 5283 year: 1985 ident: 10.1016/j.mcp.2009.03.003_bib54 article-title: The C. elegans vitellogenin genes: short sequence repeats in the promoter regions and homology to the vertebrate genes publication-title: Nucleic Acids Res doi: 10.1093/nar/13.14.5283 contributor: fullname: Spieth – volume: 33 start-page: 313 year: 2003 ident: 10.1016/j.mcp.2009.03.003_bib70 article-title: Molecular characterisation of a male-specific serine/threonine phosphatase from Oesophagostomum dentatum (Nematoda: Strongylida), and functional analysis of homologues in Caenorhabditis elegans publication-title: Int J Parasitol doi: 10.1016/S0020-7519(02)00263-1 contributor: fullname: Boag – volume: 69 start-page: 549 year: 1983 ident: 10.1016/j.mcp.2009.03.003_bib32 article-title: Factors contributing to the in vitro development of Ascaris suum from second-stage larvae to mature adults publication-title: J Parasitol doi: 10.2307/3281369 contributor: fullname: Douvres – volume: 3 start-page: R0041 year: 2002 ident: 10.1016/j.mcp.2009.03.003_bib75 article-title: Identification of Schistosoma mansoni gender-associated gene transcripts by cDNA microarray profiling publication-title: Genome Biol doi: 10.1186/gb-2002-3-8-research0041 contributor: fullname: Hoffmann – volume: 38 start-page: 65 year: 2008 ident: 10.1016/j.mcp.2009.03.003_bib51 article-title: Gender-enriched transcripts in Haemonchus contortus–predicted functions and genetic interactions based on comparative analyses with Caenorhabditis elegans publication-title: Int J Parasitol doi: 10.1016/j.ijpara.2007.07.001 contributor: fullname: Campbell – volume: 173 start-page: 985 year: 2006 ident: 10.1016/j.mcp.2009.03.003_bib61 article-title: Identification of novel chondroitin proteoglycans in Caenorhabditis elegans: embryonic cell division depends on CPG-1 and CPG-2 publication-title: J Cell Biol doi: 10.1083/jcb.200603003 contributor: fullname: Olson – volume: 29 start-page: 87 year: 1999 ident: 10.1016/j.mcp.2009.03.003_bib60 article-title: Peritrophic matrix proteins publication-title: Insect Biochem Mol Biol doi: 10.1016/S0965-1748(98)00123-4 contributor: fullname: Tellam – volume: 38 start-page: 455 year: 2008 ident: 10.1016/j.mcp.2009.03.003_bib84 article-title: Gender-enriched transcription of activation associated secreted proteins in Ostertagia ostertagi publication-title: Int J Parasitol doi: 10.1016/j.ijpara.2007.08.008 contributor: fullname: Visser – volume: 282 start-page: 2041 year: 1998 ident: 10.1016/j.mcp.2009.03.003_bib17 article-title: Caenorhabditis elegans is a nematode publication-title: Science doi: 10.1126/science.282.5396.2041 contributor: fullname: Blaxter – volume: 20 start-page: 178 year: 2004 ident: 10.1016/j.mcp.2009.03.003_bib23 article-title: Functional genomics for parasitic nematodes and platyhelminths publication-title: Trends Parasitol doi: 10.1016/j.pt.2004.01.016 contributor: fullname: Aboobaker – volume: 17 start-page: 387 year: 2001 ident: 10.1016/j.mcp.2009.03.003_bib20 article-title: Caenorhabditis elegans and the study of gene function in parasites publication-title: Trends Parasitol doi: 10.1016/S1471-4922(01)01986-9 contributor: fullname: Hashmi – volume: 67 start-page: 4771 year: 1999 ident: 10.1016/j.mcp.2009.03.003_bib79 article-title: Identification of abundantly expressed novel and conserved genes from the infective larval stage of Toxocara canis by an expressed sequence tag strategy publication-title: Infect Immun doi: 10.1128/IAI.67.9.4771-4779.1999 contributor: fullname: Tetteh – start-page: 175 year: 1998 ident: 10.1016/j.mcp.2009.03.003_bib46 article-title: A hidden Markov model for predicting transmembrane helices in protein sequences contributor: fullname: Sonnhammer – volume: 51 start-page: 319 year: 2002 ident: 10.1016/j.mcp.2009.03.003_bib21 article-title: Functional genomics of parasitic worms: the dawn of a new era publication-title: Parasitol Int doi: 10.1016/S1383-5769(02)00063-6 contributor: fullname: Brooks – volume: 21 start-page: 101 year: 2005 ident: 10.1016/j.mcp.2009.03.003_bib25 article-title: Mining nematode genome data for novel drug targets publication-title: Trends Parasitol doi: 10.1016/j.pt.2004.12.002 contributor: fullname: Foster – volume: 34 start-page: 633 year: 2004 ident: 10.1016/j.mcp.2009.03.003_bib38 article-title: Profiling of gender-specific gene expression for Trichostrongylus vitrinus (Nematoda: Strongylida) by microarray analysis of expressed sequence tag libraries constructed by suppressive-subtractive hybridization publication-title: Int J Parasitol doi: 10.1016/j.ijpara.2003.12.007 contributor: fullname: Nisbet – volume: 291 start-page: 2144 year: 2001 ident: 10.1016/j.mcp.2009.03.003_bib67 article-title: A sperm cytoskeletal protein that signals oocyte meiotic maturation and ovulation publication-title: Science doi: 10.1126/science.1057586 contributor: fullname: Miller – volume: 33 start-page: 897 year: 2003 ident: 10.1016/j.mcp.2009.03.003_bib82 article-title: Molecular characterisation of the Ancylostoma-secreted protein family from the adult stage of Ancylostoma caninum publication-title: Int J Parasitol doi: 10.1016/S0020-7519(03)00111-5 contributor: fullname: Zhan – volume: 311 start-page: 1481 year: 2006 ident: 10.1016/j.mcp.2009.03.003_bib50 article-title: Genome-wide prediction of C. elegans genetic interactions publication-title: Science doi: 10.1126/science.1123287 contributor: fullname: Zhong – volume: 143 start-page: 49 year: 2005 ident: 10.1016/j.mcp.2009.03.003_bib59 article-title: Profiling of gender-regulated gene transcripts in the filarial nematode Brugia malayi by cDNA oligonucleotide array analysis publication-title: Mol Biochem Parasitol doi: 10.1016/j.molbiopara.2005.05.005 contributor: fullname: Li – volume: 45 start-page: 1151 year: 2002 ident: 10.1016/j.mcp.2009.03.003_bib74 article-title: Serine/threonine protein phosphatase inhibitors: development of potential therapeutic strategies publication-title: J Med Chem doi: 10.1021/jm010066k contributor: fullname: McCluskey – volume: 19 start-page: 390 year: 2003 ident: 10.1016/j.mcp.2009.03.003_bib40 article-title: SimiTri–visualizing similarity relationships for groups of sequences publication-title: Bioinformatics doi: 10.1093/bioinformatics/btf870 contributor: fullname: Parkinson – volume: 66 start-page: 1548 year: 1988 ident: 10.1016/j.mcp.2009.03.003_bib2 article-title: Losses to internal parasites in swine production publication-title: J Anim Sci doi: 10.2527/jas1988.6661548x contributor: fullname: Stewart – volume: 25 start-page: 25 year: 2000 ident: 10.1016/j.mcp.2009.03.003_bib52 article-title: Gene ontology: tool for the unification of biology. The gene ontology consortium publication-title: Nat Genet doi: 10.1038/75556 contributor: fullname: Ashburner – volume: 305 start-page: 567 year: 2001 ident: 10.1016/j.mcp.2009.03.003_bib47 article-title: Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes publication-title: J Mol Biol doi: 10.1006/jmbi.2000.4315 contributor: fullname: Krogh – volume: 124 start-page: 1 year: 2002 ident: 10.1016/j.mcp.2009.03.003_bib57 article-title: An embryo-associated fatty acid-binding protein in the filarial nematode Brugia malayi publication-title: Mol Biochem Parasitol doi: 10.1016/S0166-6851(02)00081-6 contributor: fullname: Michalski – volume: 17 start-page: 646 year: 2001 ident: 10.1016/j.mcp.2009.03.003_bib48 article-title: Evaluation of methods for the prediction of membrane spanning regions publication-title: Bioinformatics doi: 10.1093/bioinformatics/17.7.646 contributor: fullname: Moller – volume: 35 start-page: W585 year: 2007 ident: 10.1016/j.mcp.2009.03.003_bib49 article-title: WoLF PSORT: protein localization predictor publication-title: Nucleic Acids Res doi: 10.1093/nar/gkm259 contributor: fullname: Horton – volume: 136 start-page: 191 year: 2004 ident: 10.1016/j.mcp.2009.03.003_bib76 article-title: Gender-associated gene expression in two related strains of Schistosoma japonicum publication-title: Mol Biochem Parasitol doi: 10.1016/j.molbiopara.2004.03.014 contributor: fullname: Fitzpatrick – volume: 6 start-page: 605 year: 2000 ident: 10.1016/j.mcp.2009.03.003_bib15 article-title: A global profile of germline gene expression in C. elegans publication-title: Mol Cell doi: 10.1016/S1097-2765(00)00059-9 contributor: fullname: Reinke – volume: 72 start-page: 81 year: 2004 ident: 10.1016/j.mcp.2009.03.003_bib12 article-title: High-throughput RNAi in Caenorhabditis elegans: genome-wide screens and functional genomics publication-title: Differentiation doi: 10.1111/j.1432-0436.2004.07202004.x contributor: fullname: Sugimoto – volume: 1 start-page: 43 year: 2001 ident: 10.1016/j.mcp.2009.03.003_bib73 article-title: Small molecule inhibitors of serine/threonine phosphatases publication-title: Mini Rev Med Chem doi: 10.2174/1389557013407205 contributor: fullname: McCluskey – volume: 50 start-page: 153 year: 2001 ident: 10.1016/j.mcp.2009.03.003_bib4 article-title: Molecular aspects of sexual development and reproduction in nematodes and schistosomes publication-title: Adv Parasitol doi: 10.1016/S0065-308X(01)50031-7 contributor: fullname: Boag – volume: 25 start-page: 281 year: 2007 ident: 10.1016/j.mcp.2009.03.003_bib7 article-title: Oesophagostomum dentatum (Strongylida) – potential as a model for genomic studies of parasitic nematodes, with biotechnological prospect publication-title: Biotechnol Adv doi: 10.1016/j.biotechadv.2007.01.008 contributor: fullname: Gasser – volume: 14 start-page: 5082 year: 2003 ident: 10.1016/j.mcp.2009.03.003_bib66 article-title: Dissection of the Ascaris sperm motility machinery identifies key proteins involved in major sperm protein-based amoeboid locomotion publication-title: Mol Biol Cell doi: 10.1091/mbc.E03-04-0246 contributor: fullname: Buttery – volume: 148 start-page: 31 year: 2007 ident: 10.1016/j.mcp.2009.03.003_bib27 article-title: Parasitic nematodes – from genomes to control publication-title: Vet Parasitol doi: 10.1016/j.vetpar.2007.05.008 contributor: fullname: Mitreva – volume: 8 start-page: 6 year: 2007 ident: 10.1016/j.mcp.2009.03.003_bib28 article-title: A hitchhiker's guide to expressed sequence tag (EST) analysis publication-title: Brief Bioinform doi: 10.1093/bib/bbl015 contributor: fullname: Nagaraj – volume: 27 start-page: 339 year: 2005 ident: 10.1016/j.mcp.2009.03.003_bib55 article-title: Shuttling between species for pathways of lifespan regulation: a central role for the vitellogenin gene family? publication-title: Bioessays doi: 10.1002/bies.20161 contributor: fullname: Brandt – volume: 20 start-page: 280 year: 2006 ident: 10.1016/j.mcp.2009.03.003_bib77 article-title: Oligonucleotide microarray analysis of strain- and gender-associated gene expression in the human blood fluke, Schistosoma japonicum publication-title: Mol Cell Probes doi: 10.1016/j.mcp.2006.02.002 contributor: fullname: Moertel – volume: 282 start-page: 2012 year: 1998 ident: 10.1016/j.mcp.2009.03.003_bib8 article-title: The C. elegans Sequencing Consortium. Genome sequence of the nematode C. elegans: a platform for investigating biology publication-title: Science doi: 10.1126/science.282.5396.2012 – volume: 134 start-page: 461 year: 2006 ident: 10.1016/j.mcp.2009.03.003_bib6 article-title: Extending from PARs in Caenorhabditis elegans to homologues in Haemonchus contortus and other parasitic nematodes publication-title: Parasitology doi: 10.1017/S0031182006001727 contributor: fullname: Nikolaou – volume: 434 start-page: 462 year: 2005 ident: 10.1016/j.mcp.2009.03.003_bib13 article-title: Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans publication-title: Nature doi: 10.1038/nature03353 contributor: fullname: Sonnichsen – volume: 20 start-page: 469 year: 2004 ident: 10.1016/j.mcp.2009.03.003_bib3 article-title: Drug resistance in veterinary helminths publication-title: Trends Parasitol doi: 10.1016/j.pt.2004.07.010 contributor: fullname: Wolstenholme – volume: 19 start-page: 390 year: 2003 ident: 10.1016/j.mcp.2009.03.003_bib85 article-title: SimiTri – visualizing similarity relationships for groups of sequences publication-title: Bioinformatics doi: 10.1093/bioinformatics/btf870 contributor: fullname: Parkinson – volume: 117 start-page: 22 year: 2007 ident: 10.1016/j.mcp.2009.03.003_bib71 article-title: Trichostrongylus vitrinus (Nematoda: Strongylida): molecular characterization and transcriptional analysis of Tv-stp-1, a serine/threonine phosphatase gene publication-title: Exp Parasitol doi: 10.1016/j.exppara.2007.03.008 contributor: fullname: Hu – volume: 271 start-page: 6672 year: 1996 ident: 10.1016/j.mcp.2009.03.003_bib80 article-title: Cloning and characterization of Ancylostoma-secreted protein. A novel protein associated with the transition to parasitism by infective hookworm larvae publication-title: J Biol Chem doi: 10.1074/jbc.271.12.6672 contributor: fullname: Hawdon – volume: 17 start-page: 187 year: 2003 ident: 10.1016/j.mcp.2009.03.003_bib68 article-title: An Eph receptor sperm-sensing control mechanism for oocyte meiotic maturation in Caenorhabditis elegans publication-title: Genes Dev doi: 10.1101/gad.1028303 contributor: fullname: Miller – volume: 1 start-page: E12 year: 2003 ident: 10.1016/j.mcp.2009.03.003_bib11 article-title: Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions publication-title: PLoS Biol doi: 10.1371/journal.pbio.0000012 contributor: fullname: Simmer – volume: 33 start-page: 1259 year: 2003 ident: 10.1016/j.mcp.2009.03.003_bib22 article-title: Gene manipulation in parasitic helminths publication-title: Int J Parasitol doi: 10.1016/S0020-7519(03)00159-0 contributor: fullname: Boyle – start-page: 122 year: 1998 ident: 10.1016/j.mcp.2009.03.003_bib44 article-title: Prediction of signal peptides and signal anchors by a hidden Markov model contributor: fullname: Nielsen – volume: 48 start-page: 285 year: 2001 ident: 10.1016/j.mcp.2009.03.003_bib30 article-title: Ascaris and ascariasis publication-title: Adv Parasitol doi: 10.1016/S0065-308X(01)48008-0 contributor: fullname: Crompton – volume: 149 start-page: 7 year: 2000 ident: 10.1016/j.mcp.2009.03.003_bib64 article-title: Acting like actin. The dynamics of the nematode major sperm protein (msp) cytoskeleton indicate a push-pull mechanism for amoeboid cell motility publication-title: J Cell Biol doi: 10.1083/jcb.149.1.7 contributor: fullname: Roberts – volume: 27 start-page: 376 year: 2009 ident: 10.1016/j.mcp.2009.03.003_bib78 article-title: A portrait of the “SCP/TAPS” proteins of eukaryotes – developing a framework for fundamental research and biotechnological outcomes publication-title: Biotechnol Adv doi: 10.1016/j.biotechadv.2009.02.005 contributor: fullname: Cantacessi – volume: 340 start-page: 783 year: 2004 ident: 10.1016/j.mcp.2009.03.003_bib45 article-title: Improved prediction of signal peptides: signal P 3.0 publication-title: J Mol Biol doi: 10.1016/j.jmb.2004.05.028 contributor: fullname: Bendtsen – volume: 9 start-page: 868 year: 1999 ident: 10.1016/j.mcp.2009.03.003_bib39 article-title: CAP3: a DNA sequence assembly program publication-title: Genome Res doi: 10.1101/gr.9.9.868 contributor: fullname: Huang – volume: 21 start-page: 3674 year: 2005 ident: 10.1016/j.mcp.2009.03.003_bib41 article-title: Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research publication-title: Bioinformatics doi: 10.1093/bioinformatics/bti610 contributor: fullname: Conesa – volume: 98 start-page: 8686 year: 2001 ident: 10.1016/j.mcp.2009.03.003_bib72 article-title: Use of cDNA subtraction and RNA interference screens in combination reveals genes required for germ-line development in Caenorhabditis elegans publication-title: Proc Natl Acad Sci U S A doi: 10.1073/pnas.141004698 contributor: fullname: Hanazawa – volume: 34 start-page: 125 year: 2004 ident: 10.1016/j.mcp.2009.03.003_bib5 article-title: Molecular biology of reproduction and development in parasitic nematodes: progress and opportunities publication-title: Int J Parasitol doi: 10.1016/j.ijpara.2003.09.012 contributor: fullname: Nisbet – volume: 391 start-page: 806 year: 1998 ident: 10.1016/j.mcp.2009.03.003_bib14 article-title: Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans publication-title: Nature doi: 10.1038/35888 contributor: fullname: Fire – volume: 2 start-page: e326 year: 2008 ident: 10.1016/j.mcp.2009.03.003_bib63 article-title: Stage- and gender-specific proteomic analysis of Brugia malayi excretory-secretory products publication-title: PLoS Negl Trop Dis doi: 10.1371/journal.pntd.0000326 contributor: fullname: Moreno – volume: 30 start-page: 313 year: 2003 ident: 10.1016/j.mcp.2009.03.003_bib10 article-title: Genome-wide RNAi screening in Caenorhabditis elegans publication-title: Methods doi: 10.1016/S1046-2023(03)00050-1 contributor: fullname: Kamath – volume: 18 start-page: 1816 year: 2007 ident: 10.1016/j.mcp.2009.03.003_bib69 article-title: A Ser/Thr kinase required for membrane-associated assembly of the major sperm protein motility apparatus in the amoeboid sperm of Ascaris publication-title: Mol Biol Cell doi: 10.1091/mbc.E06-08-0741 contributor: fullname: Yi – volume: 5 start-page: 63 year: 2001 ident: 10.1016/j.mcp.2009.03.003_bib9 article-title: Genome-wide RNAi publication-title: Curr Opin Chem Biol doi: 10.1016/S1367-5931(00)00173-3 contributor: fullname: Barstead – volume: 10 start-page: 1 year: 1997 ident: 10.1016/j.mcp.2009.03.003_bib43 article-title: Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites publication-title: Prot Eng doi: 10.1093/protein/10.1.1 contributor: fullname: Nielsen – volume: 73 start-page: 1995 year: 2005 ident: 10.1016/j.mcp.2009.03.003_bib33 article-title: Pyrophosphatase of the roundworm Ascaris suum plays an essential role in the worm's molting and development publication-title: Infect Immun doi: 10.1128/IAI.73.4.1995-2004.2005 contributor: fullname: Islam – volume: 132 start-page: 691 year: 2006 ident: 10.1016/j.mcp.2009.03.003_bib56 article-title: Construction of gender-enriched cDNA archives for adult Oesophagostomum dentatum by suppressive-subtractive hybridization and a microarray analysis of expressed sequence tags publication-title: Parasitology doi: 10.1017/S0031182005009728 contributor: fullname: Cottee – volume: 36 start-page: 651 year: 2006 ident: 10.1016/j.mcp.2009.03.003_bib26 article-title: Using Caenorhabditis elegans for functional analysis of genes of parasitic nematodes publication-title: Int J Parasitol doi: 10.1016/j.ijpara.2006.02.010 contributor: fullname: Britton – volume: 202 start-page: 1 year: 2001 ident: 10.1016/j.mcp.2009.03.003_bib65 article-title: How the assembly dynamics of the nematode major sperm protein generate amoeboid cell motility publication-title: Int Rev Cytol doi: 10.1016/S0074-7696(01)02002-2 contributor: fullname: Italiano – volume: 98 start-page: 218 year: 2001 ident: 10.1016/j.mcp.2009.03.003_bib16 article-title: Genome-wide analysis of developmental and sex-regulated gene expression profiles in Caenorhabditis elegans publication-title: Proc Natl Acad Sci U S A doi: 10.1073/pnas.011520898 contributor: fullname: Jiang – volume: 34 start-page: 139 year: 2004 ident: 10.1016/j.mcp.2009.03.003_bib24 article-title: Technological advances and genomics in metazoan parasites publication-title: Int J Parasitol doi: 10.1016/j.ijpara.2003.10.013 contributor: fullname: Knox – volume: 177 start-page: 1569 year: 2007 ident: 10.1016/j.mcp.2009.03.003_bib62 article-title: Role of the Caenorhabditis elegans multidrug resistance gene, mrp-4, in gut granule differentiation publication-title: Genetics doi: 10.1534/genetics.107.080689 contributor: fullname: Currie |
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SubjectTerms | Aging - genetics Animals Ascaris suum Ascaris suum - genetics Automation - methods Bioinformatics Caenorhabditis elegans Caenorhabditis elegans - genetics Computational Biology - methods Expressed Sequence Tags Female Gender-enriched Gene Expression Profiling - methods Gene ontology Genetic interactions Male Molecular Sequence Data Nematoda RNA, Messenger - analysis RNA, Messenger - genetics Sex Characteristics Suppressive-subtractive hybridization Transcription, Genetic - genetics |
Title | Bioinformatic analysis of abundant, gender-enriched transcripts of adult Ascaris suum (Nematoda) using a semi-automated workflow platform |
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