A novel nyavirus lacking matrix and glycoprotein genes from Argas japonicus ticks
•A new nyavirus, designated Sekira virus (SEKRV), was detected from Argas japonicus ticks in Japan.•SEKRV lacks the genes encoding matrix protein (M) and glycoprotein (G).•This is the first report of a nyavirus deficient in M and G genes in nature. Viruses are highly diverse and are the sole agents...
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| Published in | Virus research Vol. 292; p. 198254 |
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| Main Authors | , , , , , |
| Format | Journal Article |
| Language | English |
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Elsevier B.V
15.01.2021
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| Abstract | •A new nyavirus, designated Sekira virus (SEKRV), was detected from Argas japonicus ticks in Japan.•SEKRV lacks the genes encoding matrix protein (M) and glycoprotein (G).•This is the first report of a nyavirus deficient in M and G genes in nature.
Viruses are highly diverse and are the sole agents that can infect organisms in all domains of life. Viruses are defined as capsid-encoding organisms as opposed to ribosome-encoding cellular organisms. However, recent advances in virology indicate the existence of unique viruses that do not meet this basic definition, such as capsidless viruses. During virome analysis of the soft tick Argas japonicus, we identified virus-like sequences closely related to the members of genus Nyavirus (family Nyamiviridae). Further analysis revealed sequences derived from a novel nyavirus that lacks two structural protein genes, matrix (M) and glycoprotein (G). This unique nyavirus is tentatively named Sekira virus (SEKRV). To our knowledge, this is the first study to report a nyavirus deficient in M and G genes in nature. The mechanism of infection, replication, and persistence of SEKRV remain unknown, yet this finding provides new insight into virus evolution and the diverse way of viral life in nature. |
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| AbstractList | Viruses are highly diverse and are the sole agents that can infect organisms in all domains of life. Viruses are defined as capsid-encoding organisms as opposed to ribosome-encoding cellular organisms. However, recent advances in virology indicate the existence of unique viruses that do not meet this basic definition, such as capsidless viruses. During virome analysis of the soft tick Argas japonicus, we identified virus-like sequences closely related to the members of genus Nyavirus (family Nyamiviridae). Further analysis revealed sequences derived from a novel nyavirus that lacks two structural protein genes, matrix (M) and glycoprotein (G). This unique nyavirus is tentatively named Sekira virus (SEKRV). To our knowledge, this is the first study to report a nyavirus deficient in M and G genes in nature. The mechanism of infection, replication, and persistence of SEKRV remain unknown, yet this finding provides new insight into virus evolution and the diverse way of viral life in nature. Viruses are highly diverse and are the sole agents that can infect organisms in all domains of life. Viruses are defined as capsid-encoding organisms as opposed to ribosome-encoding cellular organisms. However, recent advances in virology indicate the existence of unique viruses that do not meet this basic definition, such as capsidless viruses. During virome analysis of the soft tick Argas japonicus, we identified virus-like sequences closely related to the members of genus Nyavirus (family Nyamiviridae). Further analysis revealed sequences derived from a novel nyavirus that lacks two structural protein genes, matrix (M) and glycoprotein (G). This unique nyavirus is tentatively named Sekira virus (SEKRV). To our knowledge, this is the first study to report a nyavirus deficient in M and G genes in nature. The mechanism of infection, replication, and persistence of SEKRV remain unknown, yet this finding provides new insight into virus evolution and the diverse way of viral life in nature.Viruses are highly diverse and are the sole agents that can infect organisms in all domains of life. Viruses are defined as capsid-encoding organisms as opposed to ribosome-encoding cellular organisms. However, recent advances in virology indicate the existence of unique viruses that do not meet this basic definition, such as capsidless viruses. During virome analysis of the soft tick Argas japonicus, we identified virus-like sequences closely related to the members of genus Nyavirus (family Nyamiviridae). Further analysis revealed sequences derived from a novel nyavirus that lacks two structural protein genes, matrix (M) and glycoprotein (G). This unique nyavirus is tentatively named Sekira virus (SEKRV). To our knowledge, this is the first study to report a nyavirus deficient in M and G genes in nature. The mechanism of infection, replication, and persistence of SEKRV remain unknown, yet this finding provides new insight into virus evolution and the diverse way of viral life in nature. •A new nyavirus, designated Sekira virus (SEKRV), was detected from Argas japonicus ticks in Japan.•SEKRV lacks the genes encoding matrix protein (M) and glycoprotein (G).•This is the first report of a nyavirus deficient in M and G genes in nature. Viruses are highly diverse and are the sole agents that can infect organisms in all domains of life. Viruses are defined as capsid-encoding organisms as opposed to ribosome-encoding cellular organisms. However, recent advances in virology indicate the existence of unique viruses that do not meet this basic definition, such as capsidless viruses. During virome analysis of the soft tick Argas japonicus, we identified virus-like sequences closely related to the members of genus Nyavirus (family Nyamiviridae). Further analysis revealed sequences derived from a novel nyavirus that lacks two structural protein genes, matrix (M) and glycoprotein (G). This unique nyavirus is tentatively named Sekira virus (SEKRV). To our knowledge, this is the first study to report a nyavirus deficient in M and G genes in nature. The mechanism of infection, replication, and persistence of SEKRV remain unknown, yet this finding provides new insight into virus evolution and the diverse way of viral life in nature. |
| ArticleNumber | 198254 |
| Author | Faizah, Astri Nur Kobayashi, Daisuke Isawa, Haruhiko Sawabe, Kyoko Komatsu, Noriyuki Amoa-Bosompem, Michael |
| Author_xml | – sequence: 1 givenname: Daisuke surname: Kobayashi fullname: Kobayashi, Daisuke organization: Department of Medical Entomology, National Institute of Infectious Diseases, 1-23-1 Toyama, Shinjuku-ku, Tokyo, 162-8640, Japan – sequence: 2 givenname: Noriyuki surname: Komatsu fullname: Komatsu, Noriyuki organization: Research and Development Department, Civil International Corporation, 1-19-4 Imado, Taito-ku, Tokyo, 111-0024, Japan – sequence: 3 givenname: Astri Nur surname: Faizah fullname: Faizah, Astri Nur organization: Department of Medical Entomology, National Institute of Infectious Diseases, 1-23-1 Toyama, Shinjuku-ku, Tokyo, 162-8640, Japan – sequence: 4 givenname: Michael surname: Amoa-Bosompem fullname: Amoa-Bosompem, Michael organization: Department of Medical Entomology, National Institute of Infectious Diseases, 1-23-1 Toyama, Shinjuku-ku, Tokyo, 162-8640, Japan – sequence: 5 givenname: Kyoko surname: Sawabe fullname: Sawabe, Kyoko organization: Department of Medical Entomology, National Institute of Infectious Diseases, 1-23-1 Toyama, Shinjuku-ku, Tokyo, 162-8640, Japan – sequence: 6 givenname: Haruhiko surname: Isawa fullname: Isawa, Haruhiko email: hisawa@nih.go.jp organization: Department of Medical Entomology, National Institute of Infectious Diseases, 1-23-1 Toyama, Shinjuku-ku, Tokyo, 162-8640, Japan |
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| Cites_doi | 10.1093/oxfordjournals.molbev.a026334 10.1073/pnas.1401786111 10.1007/s00705-020-04731-2 10.1099/jgv.0.000929 10.1128/JVI.02036-15 10.1111/j.1558-5646.1985.tb00420.x 10.4269/ajtmh.14-0076 10.1099/vir.0.030585-0 10.1099/vir.0.048850-0 10.1093/bib/bbx108 10.1371/journal.ppat.1008224 10.1099/jgv.0.000973 10.1099/jgv.0.001301 10.1111/1348-0421.12505 10.1038/nrmicro1858 10.1128/mBio.00450-20 10.1128/JVI.02667-08 10.1007/s00705-013-1674-y 10.3390/v11100927 10.3389/fmicb.2018.02340 10.1073/pnas.1324194111 10.1099/vir.0.056614-0 10.1038/nmicrobiol.2015.1 10.1016/j.jviromet.2005.06.022 10.7554/eLife.05378 10.1111/mpp.12587 10.1371/journal.pone.0193881 10.1128/JVI.00571-12 10.1007/s00705-018-4093-2 10.1016/j.virusres.2017.11.006 10.1128/genomeA.01668-16 10.1128/JVI.00163-13 10.1016/j.ttbdis.2017.04.010 10.1128/JVI.01858-14 10.1093/nar/25.17.3389 10.1093/molbev/mst197 10.7717/peerj.6216 10.1016/j.ttbdis.2019.101364 10.1128/MMBR.00049-13 10.1038/nature20167 |
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| Keywords | Virus evolution Tick Nyavirus Nyamiviridae Virome Glycoprotein gene-deficient |
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| Snippet | •A new nyavirus, designated Sekira virus (SEKRV), was detected from Argas japonicus ticks in Japan.•SEKRV lacks the genes encoding matrix protein (M) and... Viruses are highly diverse and are the sole agents that can infect organisms in all domains of life. Viruses are defined as capsid-encoding organisms as... |
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| SubjectTerms | Argas evolution Glycoprotein gene-deficient glycoproteins Nyamiviridae Nyavirus structural proteins Tick ticks virology Virome Virus evolution viruses |
| Title | A novel nyavirus lacking matrix and glycoprotein genes from Argas japonicus ticks |
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