Biocontrol potential of a novel broad-spectrum antifungal strain Bacillus velezensis Shannan.BV80-12 isolated from the Tibetan Plateau

•Bacillus velezensis Shannan.BV80-12 is a promising broad-spectrum biocontrol agent.•Shannan.BV80-12 can co-produce a variety of antimicrobial metabolites.•Shannan.BV80-12 can promote plant growth.•Shannan.BV80-12 harbors specific genetic elements for stress adaptions. Plant diseases caused by patho...

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Published inBiological control Vol. 207; p. 105821
Main Authors Tan, Yali, Dong, Feiyan, Wang, Rong, Li, Xiao, Zhang, Jialan, Gu, Tong, Li, Li, Gao, Mengxiang
Format Journal Article
LanguageEnglish
Published Elsevier Inc 01.08.2025
Elsevier
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Abstract •Bacillus velezensis Shannan.BV80-12 is a promising broad-spectrum biocontrol agent.•Shannan.BV80-12 can co-produce a variety of antimicrobial metabolites.•Shannan.BV80-12 can promote plant growth.•Shannan.BV80-12 harbors specific genetic elements for stress adaptions. Plant diseases caused by pathogenic fungi are major contributors to global crop loss. Although chemical fungicides are effective for disease control, concerns regarding their adverse effects on human health and the environment have driven interest in sustainable alternatives. Beneficial microorganism-based biological controls have attracted considerable attention in this context. In this study, a novel bacterial strain, Bacillus velezensis Shannan.BV80-12, was isolated from the high-altitude Tibetan Plateau. The strain demonstrated significant inhibitory effects against 21 plant pathogenic fungi across 12 genera, showing inhibition rates between 61.9% and 97.5% in dual-culture assays and between 40.2% and 89.0% in poison agar assays with 2% cell-free supernatant. It also effectively controlled fungal plant diseases in detached leaf assays. Genome sequencing and analysis revealed the genetic basis for its biocontrol efficacy, including 19 biosynthetic gene clusters responsible for secondary metabolites and 23 glycoside hydrolase genes involved in degrading phytopathogen cell walls. UPLC-MS analysis of cell-free supernatants identified six distinct families of antimicrobial metabolites: fengycins (C14–C17), surfactins (C12–C16), iturins (C14–C16), bacillibactin, plantazolicin and bacilysin, suggesting that strain Shannan.BV80-12 possesses the capability to co-produce a variety of bioactive metabolites that synergistically contribute to its strong antimicrobial effects. Genome annotation and comparative genomics further revealed multiple genes associated with bacteria-plant interactions that can enhance plant health and resistance to pathogens, as well as genes crucial for adaptation to harsh environments, which may contribute to the stability and efficacy of the strain in controlling phytopathogens under adverse conditions. These findings elucidate the biocontrol mechanisms of B. velezensis strain Shannan.BV80-12 and support its potential application as a broad-spectrum biocontrol agent against phytopathogenic fungi in sustainable agriculture.
AbstractList Plant diseases caused by pathogenic fungi are major contributors to global crop loss. Although chemical fungicides are effective for disease control, concerns regarding their adverse effects on human health and the environment have driven interest in sustainable alternatives. Beneficial microorganism-based biological controls have attracted considerable attention in this context. In this study, a novel bacterial strain, Bacillus velezensis Shannan.BV80-12, was isolated from the high-altitude Tibetan Plateau. The strain demonstrated significant inhibitory effects against 21 plant pathogenic fungi across 12 genera, showing inhibition rates between 61.9% and 97.5% in dual-culture assays and between 40.2% and 89.0% in poison agar assays with 2% cell-free supernatant. It also effectively controlled fungal plant diseases in detached leaf assays. Genome sequencing and analysis revealed the genetic basis for its biocontrol efficacy, including 19 biosynthetic gene clusters responsible for secondary metabolites and 23 glycoside hydrolase genes involved in degrading phytopathogen cell walls. UPLC-MS analysis of cell-free supernatants identified six distinct families of antimicrobial metabolites: fengycins (C14–C17), surfactins (C12–C16), iturins (C14–C16), bacillibactin, plantazolicin and bacilysin, suggesting that strain Shannan.BV80-12 possesses the capability to co-produce a variety of bioactive metabolites that synergistically contribute to its strong antimicrobial effects. Genome annotation and comparative genomics further revealed multiple genes associated with bacteria-plant interactions that can enhance plant health and resistance to pathogens, as well as genes crucial for adaptation to harsh environments, which may contribute to the stability and efficacy of the strain in controlling phytopathogens under adverse conditions. These findings elucidate the biocontrol mechanisms of B. velezensis strain Shannan.BV80-12 and support its potential application as a broad-spectrum biocontrol agent against phytopathogenic fungi in sustainable agriculture.
•Bacillus velezensis Shannan.BV80-12 is a promising broad-spectrum biocontrol agent.•Shannan.BV80-12 can co-produce a variety of antimicrobial metabolites.•Shannan.BV80-12 can promote plant growth.•Shannan.BV80-12 harbors specific genetic elements for stress adaptions. Plant diseases caused by pathogenic fungi are major contributors to global crop loss. Although chemical fungicides are effective for disease control, concerns regarding their adverse effects on human health and the environment have driven interest in sustainable alternatives. Beneficial microorganism-based biological controls have attracted considerable attention in this context. In this study, a novel bacterial strain, Bacillus velezensis Shannan.BV80-12, was isolated from the high-altitude Tibetan Plateau. The strain demonstrated significant inhibitory effects against 21 plant pathogenic fungi across 12 genera, showing inhibition rates between 61.9% and 97.5% in dual-culture assays and between 40.2% and 89.0% in poison agar assays with 2% cell-free supernatant. It also effectively controlled fungal plant diseases in detached leaf assays. Genome sequencing and analysis revealed the genetic basis for its biocontrol efficacy, including 19 biosynthetic gene clusters responsible for secondary metabolites and 23 glycoside hydrolase genes involved in degrading phytopathogen cell walls. UPLC-MS analysis of cell-free supernatants identified six distinct families of antimicrobial metabolites: fengycins (C14–C17), surfactins (C12–C16), iturins (C14–C16), bacillibactin, plantazolicin and bacilysin, suggesting that strain Shannan.BV80-12 possesses the capability to co-produce a variety of bioactive metabolites that synergistically contribute to its strong antimicrobial effects. Genome annotation and comparative genomics further revealed multiple genes associated with bacteria-plant interactions that can enhance plant health and resistance to pathogens, as well as genes crucial for adaptation to harsh environments, which may contribute to the stability and efficacy of the strain in controlling phytopathogens under adverse conditions. These findings elucidate the biocontrol mechanisms of B. velezensis strain Shannan.BV80-12 and support its potential application as a broad-spectrum biocontrol agent against phytopathogenic fungi in sustainable agriculture.
ArticleNumber 105821
Author Li, Li
Zhang, Jialan
Wang, Rong
Li, Xiao
Gu, Tong
Dong, Feiyan
Gao, Mengxiang
Tan, Yali
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  givenname: Feiyan
  surname: Dong
  fullname: Dong, Feiyan
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  surname: Wang
  fullname: Wang, Rong
  organization: College of Life Science, Yangtze University, Jingzhou 434025, China
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  givenname: Xiao
  surname: Li
  fullname: Li, Xiao
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Keywords Antifungal activity
Whole-genomic analysis
Stress adaptability
Biological control
Phytopathogenic fungi
Bacillus velezensis
Language English
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Snippet •Bacillus velezensis Shannan.BV80-12 is a promising broad-spectrum biocontrol agent.•Shannan.BV80-12 can co-produce a variety of antimicrobial...
Plant diseases caused by pathogenic fungi are major contributors to global crop loss. Although chemical fungicides are effective for disease control, concerns...
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StartPage 105821
SubjectTerms Antifungal activity
Bacillus velezensis
Biological control
Phytopathogenic fungi
Stress adaptability
Whole-genomic analysis
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Title Biocontrol potential of a novel broad-spectrum antifungal strain Bacillus velezensis Shannan.BV80-12 isolated from the Tibetan Plateau
URI https://dx.doi.org/10.1016/j.biocontrol.2025.105821
https://doaj.org/article/c0305db0c53749d18ca21c26e432611c
Volume 207
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