Editorial: Integrating Whole Genome Sequencing Into Source Attribution and Risk Assessment of Foodborne Bacterial Pathogens

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Published inFrontiers in microbiology Vol. 12; p. 795098
Main Authors Pasquali, Frederique, Remondini, Daniel, Snary, Emma Louise, Hald, Tine, Guillier, Laurent
Format Journal Article
LanguageEnglish
Published Switzerland Frontiers Media S.A 26.11.2021
Subjects
foodborne pathogens
metagenomics
microbial risk assessment
Microbiology
source attribution
whole genome sequencing
whole genome sequencing
source attribution
foodborne pathogens
metagenomics
microbial risk assessment
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Author Hald, Tine
Pasquali, Frederique
Guillier, Laurent
Remondini, Daniel
Snary, Emma Louise
AuthorAffiliation 3 Department of Epidemiological Sciences, Animal and Plant Health Agency (APHA) , Addlestone , United Kingdom
2 Department of Physics and Astronomy, Alma Mater Studiorum - University of Bologna , Bologna , Italy
5 Department of Risk Assessment, Agence Nationale de Sécurité Sanitaire de l'Alimentation, de l'Environnement et du Travail (ANSES) , Maisons-Alfort , France
4 National Food Institute, Technical University of Denmark , Kongens Lyngby , Denmark
1 Department of Agricultural and Food Sciences, Alma Mater Studiorum - University of Bologna , Bologna , Italy
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– name: 1 Department of Agricultural and Food Sciences, Alma Mater Studiorum - University of Bologna , Bologna , Italy
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Cites_doi 10.3389/fmicb.2019.02578
10.1016/j.cofs.2016.04.004
10.1186/s40168-019-0735-1
10.1016/j.mran.2018.06.003
10.3389/fmicb.2018.01983
10.1111/zph.12403
10.2903/sp.efsa.2017.EN-115
10.1016/j.ijfoodmicro.2013.03.005
10.1016/j.meegid.2009.09.003
10.2903/j.efsa.2016.s0507
10.2807/1560-7917.ES.2019.24.43.1800696
10.2903/j.efsa.2019.5898
10.1111/j.0272-4332.2004.00427.x
10.1111/j.1539-6924.2009.01224.x
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Copyright Copyright © 2021 Pasquali, Remondini, Snary, Hald and Guillier. 2021 Pasquali, Remondini, Snary, Hald and Guillier
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Keywords whole genome sequencing
source attribution
foodborne pathogens
metagenomics
microbial risk assessment
Language English
License This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
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This article was submitted to Food Microbiology, a section of the journal Frontiers in Microbiology
Edited by: Giovanna Suzzi, University of Teramo, Italy
Reviewed by: Arun K. Bhunia, Purdue University, United States
OpenAccessLink https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8661528/
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Cody (B3) 2019; 24
Franz (B6) 2016; 8
Gupta (B8) 2019; 7
Nielsen (B15) 2017; 14
Mullner (B14); 9
Fritsch (B7) 2018; 10
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SubjectTerms foodborne pathogens
metagenomics
microbial risk assessment
Microbiology
source attribution
whole genome sequencing
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Title Editorial: Integrating Whole Genome Sequencing Into Source Attribution and Risk Assessment of Foodborne Bacterial Pathogens
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