Mammalian SWI/SNF collaborates with a polycomb-associated protein to regulate male germline transcription in the mouse

A deficiency in BRG1, the catalytic subunit of the SWI/SNF chromatin remodeling complex, results in a meiotic arrest during spermatogenesis. Here, we explore the causative mechanisms. BRG1 is preferentially enriched at active promoters of genes essential for spermatogonial pluripotency and meiosis....

Full description

Saved in:
Bibliographic Details
Published inDevelopment (Cambridge) Vol. 146; no. 19
Main Authors Menon, Debashish U., Shibata, Yoichiro, Mu, Weipeng, Magnuson, Terry
Format Journal Article
LanguageEnglish
Published England The Company of Biologists Ltd 05.07.2019
Subjects
Online AccessGet full text

Cover

Loading…
Abstract A deficiency in BRG1, the catalytic subunit of the SWI/SNF chromatin remodeling complex, results in a meiotic arrest during spermatogenesis. Here, we explore the causative mechanisms. BRG1 is preferentially enriched at active promoters of genes essential for spermatogonial pluripotency and meiosis. In contrast, BRG1 is also associated with the repression of somatic genes. Chromatin accessibility at these target promoters is dependent upon BRG1. These results favor a model in which BRG1 coordinates spermatogenic transcription to ensure meiotic progression. In spermatocytes, BRG1 interacts with SCML2, a testis-specific PRC1 factor that is associated with the repression of somatic genes. We present evidence to suggest that BRG1 and SCML2 concordantly regulate genes during meiosis. Furthermore, BRG1 is required for the proper localization of SCML2 and its associated deubiquitylase, USP7, to the sex chromosomes during pachynema. SCML2-associated mono-ubiquitylation of histone H2A lysine 119 (H2AK119ub1) and acetylation of histone lysine 27 (H3K27ac) are elevated in Brg1cKO testes. Coincidentally, the PRC1 ubiquitin ligase RNF2 is activated while a histone H2A/H2B deubiquitylase USP3 is repressed. Thus, BRG1 impacts the male epigenome by influencing the localization and expression of epigenetic modifiers. This mechanism highlights a novel paradigm of cooperativity between SWI/SNF and PRC1.
AbstractList A deficiency in BRG1, the catalytic subunit of the SWI/SNF chromatin remodeling complex, results in a meiotic arrest during spermatogenesis. Here, we explore the causative mechanisms. BRG1 is preferentially enriched at active promoters of genes essential for spermatogonial pluripotency and meiosis. In contrast, BRG1 is also associated with the repression of somatic genes. Chromatin accessibility at these target promoters is dependent upon BRG1. These results favor a model in which BRG1 coordinates spermatogenic transcription to ensure meiotic progression. In spermatocytes, BRG1 interacts with SCML2, a testis-specific PRC1 factor that is associated with the repression of somatic genes. We present evidence to suggest that BRG1 and SCML2 concordantly regulate genes during meiosis. Furthermore, BRG1 is required for the proper localization of SCML2 and its associated deubiquitylase, USP7, to the sex chromosomes during pachynema. SCML2-associated mono-ubiquitylation of histone H2A lysine 119 (H2AK119ub1) and acetylation of histone lysine 27 (H3K27ac) are elevated in Brg1 cKO testes. Coincidentally, the PRC1 ubiquitin ligase RNF2 is activated while a histone H2A/H2B deubiquitylase USP3 is repressed. Thus, BRG1 impacts the male epigenome by influencing the localization and expression of epigenetic modifiers. This mechanism highlights a novel paradigm of cooperativity between SWI/SNF and PRC1. Summary: Epigenetic studies of BRG1 reveal for the first time that SWI/SNF and PRC1 cooperate during gametogenesis to regulate transcription.
A deficiency in BRG1, the catalytic subunit of the SWI/SNF chromatin remodeling complex, results in a meiotic arrest during spermatogenesis. Here, we explore the causative mechanisms. BRG1 is preferentially enriched at active promoters of genes essential for spermatogonial pluripotency and meiosis. In contrast, BRG1 is also associated with the repression of somatic genes. Chromatin accessibility at these target promoters is dependent upon BRG1. These results favor a model in which BRG1 coordinates spermatogenic transcription to ensure meiotic progression. In spermatocytes, BRG1 interacts with SCML2, a testis-specific PRC1 factor that is associated with the repression of somatic genes. We present evidence to suggest that BRG1 and SCML2 concordantly regulate genes during meiosis. Furthermore, BRG1 is required for the proper localization of SCML2 and its associated deubiquitylase, USP7, to the sex chromosomes during pachynema. SCML2-associated mono-ubiquitylation of histone H2A lysine 119 (H2AK119ub1) and acetylation of histone lysine 27 (H3K27ac) are elevated in testes. Coincidentally, the PRC1 ubiquitin ligase RNF2 is activated while a histone H2A/H2B deubiquitylase USP3 is repressed. Thus, BRG1 impacts the male epigenome by influencing the localization and expression of epigenetic modifiers. This mechanism highlights a novel paradigm of cooperativity between SWI/SNF and PRC1.
A deficiency in BRG1, the catalytic subunit of the SWI/SNF chromatin remodeling complex, results in a meiotic arrest during spermatogenesis. Here, we explore the causative mechanisms. BRG1 is preferentially enriched at active promoters of genes essential for spermatogonial pluripotency and meiosis. In contrast, BRG1 is also associated with the repression of somatic genes. Chromatin accessibility at these target promoters is dependent upon BRG1. These results favor a model in which BRG1 coordinates spermatogenic transcription to ensure meiotic progression. In spermatocytes, BRG1 interacts with SCML2, a testis-specific PRC1 factor that is associated with the repression of somatic genes. We present evidence to suggest that BRG1 and SCML2 concordantly regulate genes during meiosis. Furthermore, BRG1 is required for the proper localization of SCML2 and its associated deubiquitylase, USP7, to the sex chromosomes during pachynema. SCML2-associated mono-ubiquitylation of histone H2A lysine 119 (H2AK119ub1) and acetylation of histone lysine 27 (H3K27ac) are elevated in Brg1cKO testes. Coincidentally, the PRC1 ubiquitin ligase RNF2 is activated while a histone H2A/H2B deubiquitylase USP3 is repressed. Thus, BRG1 impacts the male epigenome by influencing the localization and expression of epigenetic modifiers. This mechanism highlights a novel paradigm of cooperativity between SWI/SNF and PRC1.A deficiency in BRG1, the catalytic subunit of the SWI/SNF chromatin remodeling complex, results in a meiotic arrest during spermatogenesis. Here, we explore the causative mechanisms. BRG1 is preferentially enriched at active promoters of genes essential for spermatogonial pluripotency and meiosis. In contrast, BRG1 is also associated with the repression of somatic genes. Chromatin accessibility at these target promoters is dependent upon BRG1. These results favor a model in which BRG1 coordinates spermatogenic transcription to ensure meiotic progression. In spermatocytes, BRG1 interacts with SCML2, a testis-specific PRC1 factor that is associated with the repression of somatic genes. We present evidence to suggest that BRG1 and SCML2 concordantly regulate genes during meiosis. Furthermore, BRG1 is required for the proper localization of SCML2 and its associated deubiquitylase, USP7, to the sex chromosomes during pachynema. SCML2-associated mono-ubiquitylation of histone H2A lysine 119 (H2AK119ub1) and acetylation of histone lysine 27 (H3K27ac) are elevated in Brg1cKO testes. Coincidentally, the PRC1 ubiquitin ligase RNF2 is activated while a histone H2A/H2B deubiquitylase USP3 is repressed. Thus, BRG1 impacts the male epigenome by influencing the localization and expression of epigenetic modifiers. This mechanism highlights a novel paradigm of cooperativity between SWI/SNF and PRC1.
A deficiency in BRG1, the catalytic subunit of the SWI/SNF chromatin remodeling complex, results in a meiotic arrest during spermatogenesis. Here, we explore the causative mechanisms. BRG1 is preferentially enriched at active promoters of genes essential for spermatogonial pluripotency and meiosis. In contrast, BRG1 is also associated with the repression of somatic genes. Chromatin accessibility at these target promoters is dependent upon BRG1. These results favor a model in which BRG1 coordinates spermatogenic transcription to ensure meiotic progression. In spermatocytes, BRG1 interacts with SCML2, a testis-specific PRC1 factor that is associated with the repression of somatic genes. We present evidence to suggest that BRG1 and SCML2 concordantly regulate genes during meiosis. Furthermore, BRG1 is required for the proper localization of SCML2 and its associated deubiquitylase, USP7, to the sex chromosomes during pachynema. SCML2-associated mono-ubiquitylation of histone H2A lysine 119 (H2AK119ub1) and acetylation of histone lysine 27 (H3K27ac) are elevated in Brg1cKO testes. Coincidentally, the PRC1 ubiquitin ligase RNF2 is activated while a histone H2A/H2B deubiquitylase USP3 is repressed. Thus, BRG1 impacts the male epigenome by influencing the localization and expression of epigenetic modifiers. This mechanism highlights a novel paradigm of cooperativity between SWI/SNF and PRC1.
Author Shibata, Yoichiro
Mu, Weipeng
Menon, Debashish U.
Magnuson, Terry
AuthorAffiliation Department of Genetics , and Lineberger Comprehensive Cancer Center, The University of North Carolina at Chapel Hill , Chapel Hill, NC 27599-7264 , USA
AuthorAffiliation_xml – name: Department of Genetics , and Lineberger Comprehensive Cancer Center, The University of North Carolina at Chapel Hill , Chapel Hill, NC 27599-7264 , USA
Author_xml – sequence: 1
  givenname: Debashish U.
  orcidid: 0000-0003-3052-9872
  surname: Menon
  fullname: Menon, Debashish U.
– sequence: 2
  givenname: Yoichiro
  orcidid: 0000-0003-4539-0172
  surname: Shibata
  fullname: Shibata, Yoichiro
– sequence: 3
  givenname: Weipeng
  surname: Mu
  fullname: Mu, Weipeng
– sequence: 4
  givenname: Terry
  orcidid: 0000-0002-0792-835X
  surname: Magnuson
  fullname: Magnuson, Terry
BackLink https://www.ncbi.nlm.nih.gov/pubmed/31043422$$D View this record in MEDLINE/PubMed
BookMark eNptkV9rFDEUxYNU7Hb1xQ8geRRh2vybyeRFkNJqobYPtfQxZDJ3dyOZZEyyK_32ZtlWVHwIgdzfPefm3BN0FGIAhN5SckqZYGcj7E6pFESJF2hBhZSNokwdoQVRLWmoUvQYneT8nRDCOylfoWNOieCCsQXafTXTZLwzAd89XJ3d3VxiG703Q0ymQMY_Xdlgg-foH22chsbkHK2rpRHPKRZwAZeIE6y3vj7iKgV4DWnyLgAuyYRsk5uLiwHv0U1F4jbDa_RyZXyGN0_3Et1fXnw7_9Jc336-Ov903Vgu-9JQxngr5cg73vOOciU5kWKUHDhIY8S4Yu1oreyBDYMwZBzaAYggBJSCrjV8iT4edOftMMFoIdSZvJ6Tm0x61NE4_XcluI1ex53uesJ5PUv0_kkgxR9byEVPLluoCQWoH9GM0V4pxXpW0Xd_ev02eQ67AuQA2BRzTrDS1hWzz6ZaO68p0ft96rpPfdhnbfnwT8uz6n_gXxn2ozI
CitedBy_id crossref_primary_10_1080_15592294_2023_2183339
crossref_primary_10_1016_j_tig_2024_10_004
crossref_primary_10_1016_j_isci_2023_107964
crossref_primary_10_1038_s41588_021_00777_3
crossref_primary_10_3389_fmed_2023_1096615
crossref_primary_10_1007_s00018_020_03539_2
crossref_primary_10_1242_dev_198838
crossref_primary_10_1111_febs_15269
crossref_primary_10_1002_bies_201900249
crossref_primary_10_1038_s41536_023_00293_4
crossref_primary_10_1083_jcb_202310143
crossref_primary_10_1073_pnas_2409346121
crossref_primary_10_1186_s12864_023_09251_2
crossref_primary_10_3389_fpls_2021_641517
crossref_primary_10_1038_s41598_021_03538_8
crossref_primary_10_1093_pcmedi_pbac016
crossref_primary_10_1007_s12015_020_10044_3
crossref_primary_10_1016_j_heliyon_2023_e15194
crossref_primary_10_1042_BST20190960
crossref_primary_10_1007_s00418_020_01942_1
crossref_primary_10_7554_eLife_46314
crossref_primary_10_1038_s41467_021_26828_1
crossref_primary_10_7554_eLife_88024_5
crossref_primary_10_7554_eLife_88024
crossref_primary_10_1016_j_molcel_2024_06_029
crossref_primary_10_1242_dev_199967
crossref_primary_10_1242_dev_200089
crossref_primary_10_1080_07853890_2024_2442534
crossref_primary_10_3389_fcell_2023_1295452
crossref_primary_10_1002_mrd_23339
crossref_primary_10_1002_dvdy_430
Cites_doi 10.1101/gad.1723908
10.1073/pnas.1804512115
10.1016/j.molcel.2010.05.004
10.1016/j.cell.2019.03.014
10.1038/ncomms4630
10.1038/nature04112
10.1128/MCB.11.4.1883
10.1186/gb-2008-9-9-r137
10.1073/pnas.0902750106
10.1371/journal.pgen.1007233
10.1634/stemcells.2008-0134
10.1101/gr.168930.113
10.1038/sj.emboj.7601767
10.1186/s13072-016-0108-y
10.1371/journal.pgen.1004954
10.1038/ng.3735
10.1242/jcs.114.16.2953
10.2144/000113764
10.1016/j.cub.2004.11.032
10.1242/dev.109496
10.1095/biolreprod.111.091330
10.1095/biolreprod.115.135533
10.1038/ng1366
10.1016/j.cell.2006.02.041
10.1186/2041-1480-4-15
10.1038/nprot.2007.202
10.1128/MCB.17.10.5976
10.1083/jcb.74.1.68
10.1128/MCB.20.22.8602-8612.2000
10.1073/pnas.1315204110
10.1093/bioinformatics/btp616
10.1016/S0091-679X(08)00004-6
10.1038/nrm.2017.26
10.1242/jcs.159103
10.1101/gad.2030811
10.1128/MCB.01197-14
10.1038/ncomms4812
10.1016/j.cub.2007.10.034
10.1101/gad.329705
10.1091/mbc.e11-05-0423
10.1242/dev.064444
10.1371/journal.pgen.1000702
10.1016/j.molcel.2014.06.028
10.1210/jcem.87.5.8476
10.1101/gad.219477.113
10.1038/ng.3483
10.1101/gad.246124.114
10.1371/journal.pgen.1002008
10.1186/s12864-015-2294-6
10.1016/j.devcel.2018.07.025
10.1371/journal.pgen.1004916
10.1038/nature11089
10.1095/biolreprod.111.097097
10.1095/biolreprod.109.083097
10.1073/pnas.1118403109
10.1242/dev.073478
10.1002/dvg.20437
10.1038/nature08911
10.1038/onc.2013.556
10.1016/j.ccr.2010.09.006
10.1371/journal.pgen.1005748
10.1016/j.cub.2017.12.020
10.1146/annurev-pathol-012414-040445
10.1038/nchembio.501
10.1038/sj.cr.7310149
10.1038/ncb1712
10.1007/s00335-015-9573-z
10.1038/nprot.2018.015
10.1002/dvg.20310
10.1038/emboj.2010.129
10.1158/0008-5472.CAN-13-3608
10.1101/gad.552310
10.1242/jcs.65.1.249
10.1089/omi.2011.0118
10.1038/nbt.3519
10.1023/A:1018445520117
10.1016/j.cell.2006.04.029
10.1038/emboj.2010.27
10.1016/j.neuron.2007.06.019
10.1038/ncomms14648
10.1038/ncomms7033
10.1093/nar/gkg047
10.1186/1471-2164-15-39
10.1083/jcb.200603063
10.1073/pnas.1302209110
10.1242/dev.000018
10.1128/MCB.01008-12
10.1038/ng.3734
10.1172/JCI57984
10.1038/nature02985
10.1016/j.molcel.2018.01.033
10.1016/j.molcel.2005.02.013
10.1002/j.1939-4640.2002.tb02345.x
10.1038/onc.2010.592
10.12688/f1000research.7563.2
10.3791/52118
10.1016/j.devcel.2015.01.014
10.1016/j.stem.2014.04.006
10.1371/journal.pgen.1002789
10.1038/nmeth.2688
10.1073/pnas.0812889106
ContentType Journal Article
Copyright 2019. Published by The Company of Biologists Ltd.
2019. Published by The Company of Biologists Ltd 2019
Copyright_xml – notice: 2019. Published by The Company of Biologists Ltd.
– notice: 2019. Published by The Company of Biologists Ltd 2019
DBID AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
7X8
5PM
DOI 10.1242/dev.174094
DatabaseName CrossRef
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
MEDLINE - Academic
PubMed Central (Full Participant titles)
DatabaseTitle CrossRef
MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
MEDLINE - Academic
DatabaseTitleList
MEDLINE
MEDLINE - Academic
CrossRef
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
DeliveryMethod fulltext_linktorsrc
Discipline Medicine
Zoology
Biology
EISSN 1477-9129
ExternalDocumentID PMC6803380
31043422
10_1242_dev_174094
Genre Journal Article
Research Support, N.I.H., Extramural
GrantInformation_xml – fundername: NIH HHS
  grantid: U42 OD010924
– fundername: NIGMS NIH HHS
  grantid: R01 GM101974
– fundername: ;
  grantid: R01GM101974; U42OD010924
GroupedDBID ---
-DZ
-ET
-~X
.55
0R~
18M
2WC
34G
39C
4.4
53G
5GY
5RE
5VS
85S
AAFWJ
AAYXX
ABZEH
ACGFS
ACMFV
ACPRK
ACREN
ADBBV
ADFRT
ADVGF
AENEX
AFFNX
AGGIJ
ALMA_UNASSIGNED_HOLDINGS
AMTXH
BAWUL
BTFSW
CITATION
CS3
DIK
DU5
E3Z
EBS
EJD
F5P
F9R
GX1
H13
HZ~
INIJC
KQ8
O9-
OK1
P2P
R.V
RCB
RHI
SJN
TR2
TWZ
UPT
W8F
WH7
WOQ
X7M
XSW
CGR
CUY
CVF
ECM
EIF
NPM
7X8
5PM
ID FETCH-LOGICAL-c378t-1223577d36383613973074d73e3e7aa4df25dcc78e2bb4a0db5be0400e99e65a3
ISSN 0950-1991
1477-9129
IngestDate Thu Aug 21 14:35:57 EDT 2025
Fri Jul 11 00:51:23 EDT 2025
Thu Apr 03 06:58:58 EDT 2025
Tue Jul 01 00:45:14 EDT 2025
Thu Apr 24 23:02:08 EDT 2025
IsDoiOpenAccess false
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 19
Keywords SCML2
Transcriptional regulation
BRG1
SWI/SNF chromatin remodeling
Language English
License http://www.biologists.com/user-licence-1-1
2019. Published by The Company of Biologists Ltd.
LinkModel OpenURL
MergedId FETCHMERGED-LOGICAL-c378t-1223577d36383613973074d73e3e7aa4df25dcc78e2bb4a0db5be0400e99e65a3
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ORCID 0000-0002-0792-835X
0000-0003-3052-9872
0000-0003-4539-0172
OpenAccessLink https://dev.biologists.org/content/develop/146/19/dev174094.full.pdf
PMID 31043422
PQID 2218999282
PQPubID 23479
ParticipantIDs pubmedcentral_primary_oai_pubmedcentral_nih_gov_6803380
proquest_miscellaneous_2218999282
pubmed_primary_31043422
crossref_citationtrail_10_1242_dev_174094
crossref_primary_10_1242_dev_174094
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate 20190705
PublicationDateYYYYMMDD 2019-07-05
PublicationDate_xml – month: 7
  year: 2019
  text: 20190705
  day: 5
PublicationDecade 2010
PublicationPlace England
PublicationPlace_xml – name: England
PublicationTitle Development (Cambridge)
PublicationTitleAlternate Development
PublicationYear 2019
Publisher The Company of Biologists Ltd
Publisher_xml – name: The Company of Biologists Ltd
References Qi (2024061301023596800_DEV174094C69) 2014; 128
Yamaguchi (2024061301023596800_DEV174094C95) 2010; 24
Motenko (2024061301023596800_DEV174094C62) 2015; 26
Brind'Amour (2024061301023596800_DEV174094C14) 2015; 6
Baker (2024061301023596800_DEV174094C5) 2015; 11
Green (2024061301023596800_DEV174094C30) 2018; 46
Minsky (2024061301023596800_DEV174094C60) 2008; 10
Kwon (2024061301023596800_DEV174094C44) 2015; 34
Maertens (2024061301023596800_DEV174094C55) 2010; 29
Li (2024061301023596800_DEV174094C52) 2014; 5
Pavri (2024061301023596800_DEV174094C67) 2006; 125
Margolin (2024061301023596800_DEV174094C57) 2014; 15
Bellve (2024061301023596800_DEV174094C9) 1977; 74
Buenrostro (2024061301023596800_DEV174094C16) 2013; 10
Lecona (2024061301023596800_DEV174094C45) 2015; 35
Luo (2024061301023596800_DEV174094C53) 2015; 11
Eaker (2024061301023596800_DEV174094C23) 2001; 114
Hammoud (2024061301023596800_DEV174094C32) 2014; 15
Biswas (2024061301023596800_DEV174094C100) 2018; 28
Heinz (2024061301023596800_DEV174094C36) 2010; 38
Huether (2024061301023596800_DEV174094C101) 2014; 5
Watanabe (2024061301023596800_DEV174094C91) 2014; 74
Kadoch (2024061301023596800_DEV174094C40) 2017; 49
Chandler (2024061301023596800_DEV174094C17) 2013; 33
Raab (2024061301023596800_DEV174094C71) 2017; 10
Hayamizu (2024061301023596800_DEV174094C34) 2013; 4
Robinson (2024061301023596800_DEV174094C72) 2010; 26
Hayashi (2024061301023596800_DEV174094C35) 2005; 438
Bauer (2024061301023596800_DEV174094C8) 2015; 95
Zhou (2024061301023596800_DEV174094C99) 2002; 23
Chang (2024061301023596800_DEV174094C18) 2011; 51
Kim (2024061301023596800_DEV174094C42) 2012; 139
Ho (2024061301023596800_DEV174094C38) 2009; 106
Zhang (2024061301023596800_DEV174094C98) 2008; 9
Oatley (2024061301023596800_DEV174094C65) 2011; 85
Soneson (2024061301023596800_DEV174094C80) 2016; 4
Nicassio (2024061301023596800_DEV174094C64) 2007; 17
Hainer (2024061301023596800_DEV174094C31) 2019
Wu (2024061301023596800_DEV174094C94) 2010; 82
Goetz (2024061301023596800_DEV174094C29) 1984; 65
De Vries (2024061301023596800_DEV174094C21) 2005; 19
Lesch (2024061301023596800_DEV174094C48) 2013; 110
Schmahl (2024061301023596800_DEV174094C75) 2008; 22
Clapier (2024061301023596800_DEV174094C19) 2017; 18
Lessard (2024061301023596800_DEV174094C50) 2007; 55
Turner (2024061301023596800_DEV174094C87) 2004; 14
Ball (2024061301023596800_DEV174094C6) 2016; 17
Royo (2024061301023596800_DEV174094C73) 2013; 27
Serber (2024061301023596800_DEV174094C76) 2015; 94
Tachibana (2024061301023596800_DEV174094C83) 2007; 26
Raab (2024061301023596800_DEV174094C70) 2015; 11
Tolstorukov (2024061301023596800_DEV174094C85) 2013; 110
Hasegawa (2024061301023596800_DEV174094C33) 2015; 32
Shibata (2024061301023596800_DEV174094C78) 2012; 8
Mu (2024061301023596800_DEV174094C63) 2014; 28
Adams (2024061301023596800_DEV174094C1) 2018; 14
Wang (2024061301023596800_DEV174094C89) 2004; 431
Ogiwara (2024061301023596800_DEV174094C66) 2011; 30
Wilson (2024061301023596800_DEV174094C92) 2010; 18
Basciani (2024061301023596800_DEV174094C7) 2002; 87
Lee (2024061301023596800_DEV174094C46) 2010; 29
Yang (2024061301023596800_DEV174094C96) 2006; 173
Bray (2024061301023596800_DEV174094C12) 2016; 34
Montgomery (2024061301023596800_DEV174094C61) 2009; 106
Stanton (2024061301023596800_DEV174094C81) 2017; 49
Turner (2024061301023596800_DEV174094C86) 2007; 134
Ichijima (2024061301023596800_DEV174094C39) 2011; 25
Fierz (2024061301023596800_DEV174094C25) 2011; 7
Blake (2024061301023596800_DEV174094C11) 2003; 31
Wojtasz (2024061301023596800_DEV174094C93) 2009; 5
Gallinari (2024061301023596800_DEV174094C27) 2007; 17
Maezawa (2024061301023596800_DEV174094C56) 2018; 115
Alexander (2024061301023596800_DEV174094C2) 2015; 142
Van Der Knaap (2024061301023596800_DEV174094C88) 2005; 17
Wang (2024061301023596800_DEV174094C90) 2012; 86
Takada (2024061301023596800_DEV174094C84) 2011; 138
Ma (2024061301023596800_DEV174094C54) 2012; 109
Euskirchen (2024061301023596800_DEV174094C24) 2011; 7
Peters (2024061301023596800_DEV174094C68) 1997; 5
Alver (2024061301023596800_DEV174094C3) 2017; 8
Buaas (2024061301023596800_DEV174094C15) 2004; 36
Brick (2024061301023596800_DEV174094C13) 2012; 485
Yu (2024061301023596800_DEV174094C97) 2012; 16
Lee (2024061301023596800_DEV174094C47) 2011; 22
Ho (2024061301023596800_DEV174094C37) 2010; 463
Dann (2024061301023596800_DEV174094C20) 2008; 26
Li (2024061301023596800_DEV174094C51) 1991; 11
Sumi-Ichinose (2024061301023596800_DEV174094C82) 1997; 17
Attanasio (2024061301023596800_DEV174094C4) 2014; 24
Skene (2024061301023596800_DEV174094C79) 2018; 13
Sadate-Ngatchou (2024061301023596800_DEV174094C74) 2008; 46
Goertz (2024061301023596800_DEV174094C28) 2011; 121
Bernstein (2024061301023596800_DEV174094C10) 2006; 125
Masliah-Planchon (2024061301023596800_DEV174094C58) 2015; 10
Kakarougkas (2024061301023596800_DEV174094C41) 2013; 55
Lesch (2024061301023596800_DEV174094C49) 2016; 48
Kubota (2024061301023596800_DEV174094C43) 2008; 86
Shechter (2024061301023596800_DEV174094C77) 2007; 2
Diagouraga (2024061301023596800_DEV174094C22) 2018; 69
Gallardo (2024061301023596800_DEV174094C26) 2007; 45
Méndez (2024061301023596800_DEV174094C59) 2000; 20
References_xml – volume: 22
  start-page: 3255
  year: 2008
  ident: 2024061301023596800_DEV174094C75
  article-title: The PDGF signaling pathway controls multiple steroid-producing lineages
  publication-title: Genes Dev.
  doi: 10.1101/gad.1723908
– volume: 115
  start-page: 4957
  year: 2018
  ident: 2024061301023596800_DEV174094C56
  article-title: Polycomb protein SCML2 facilitates H3K27me3 to establish bivalent domains in the male germline
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.1804512115
– volume: 38
  start-page: 576
  year: 2010
  ident: 2024061301023596800_DEV174094C36
  article-title: Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities
  publication-title: Mol. Cell
  doi: 10.1016/j.molcel.2010.05.004
– year: 2019
  ident: 2024061301023596800_DEV174094C31
  article-title: Profiling of pluripotency factors in single cells and early embryos
  publication-title: Cell
  doi: 10.1016/j.cell.2019.03.014
– volume: 5
  start-page: 1
  year: 2014
  ident: 2024061301023596800_DEV174094C101
  article-title: The landscape of somatic mutations in epigenetic regulators across 1,000 paediatric cancer genomes
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms4630
– volume: 438
  start-page: 374
  year: 2005
  ident: 2024061301023596800_DEV174094C35
  article-title: A histone H3 methyltransferase controls epigenetic events required for meiotic prophase
  publication-title: Nature
  doi: 10.1038/nature04112
– volume: 11
  start-page: 1883
  year: 1991
  ident: 2024061301023596800_DEV174094C51
  article-title: An in vitro transcription analysis of early responses of the human immunodeficiency virus type 1 long terminal repeat to different transcriptional activators
  publication-title: Mol. Cell. Biol.
  doi: 10.1128/MCB.11.4.1883
– volume: 9
  start-page: R137
  year: 2008
  ident: 2024061301023596800_DEV174094C98
  article-title: Model-based analysis of ChIP-Seq (MACS)
  publication-title: Genome Biol.
  doi: 10.1186/gb-2008-9-9-r137
– volume: 106
  start-page: 7876
  year: 2009
  ident: 2024061301023596800_DEV174094C61
  article-title: Histone deacetylases 1 and 2 control the progression of neural precursors to neurons during brain development
  publication-title: Proc. Natl. Acad. Sci.
  doi: 10.1073/pnas.0902750106
– volume: 14
  start-page: e1007233
  year: 2018
  ident: 2024061301023596800_DEV174094C1
  article-title: RNF8 and SCML2 cooperate to regulate ubiquitination and H3K27 acetylation for escape gene activation on the sex chromosomes
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1007233
– volume: 26
  start-page: 2928
  year: 2008
  ident: 2024061301023596800_DEV174094C20
  article-title: Spermatogonial stem cell self-renewal requires OCT4, a factor downregulated during retinoic acid-induced differentiation
  publication-title: Stem Cells
  doi: 10.1634/stemcells.2008-0134
– volume: 24
  start-page: 920
  year: 2014
  ident: 2024061301023596800_DEV174094C4
  article-title: Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis
  publication-title: Genome Res.
  doi: 10.1101/gr.168930.113
– volume: 26
  start-page: 3346
  year: 2007
  ident: 2024061301023596800_DEV174094C83
  article-title: Functional dynamics of H3K9 methylation during meiotic prophase progression
  publication-title: EMBO J.
  doi: 10.1038/sj.emboj.7601767
– volume: 10
  start-page: 1
  year: 2017
  ident: 2024061301023596800_DEV174094C71
  article-title: Co-regulation of transcription by BRG1 and BRM, two mutually exclusive SWI/SNF ATPase subunits
  publication-title: Epigenetics Chromatin
  doi: 10.1186/s13072-016-0108-y
– volume: 11
  start-page: e1004954
  year: 2015
  ident: 2024061301023596800_DEV174094C53
  article-title: Polycomb protein SCML2 associates with USP7 and counteracts histone H2A ubiquitination in the XY chromatin during male meiosis
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1004954
– volume: 49
  start-page: 282
  year: 2017
  ident: 2024061301023596800_DEV174094C81
  article-title: Smarca4 ATPase mutations disrupt direct eviction of PRC1 from chromatin
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3735
– volume: 114
  start-page: 2953
  year: 2001
  ident: 2024061301023596800_DEV174094C23
  article-title: Evidence for meiotic spindle checkpoint from analysis of spermatocytes from Robertsonian-chromosome heterozygous mice
  publication-title: J. Cell Sci.
  doi: 10.1242/jcs.114.16.2953
– volume: 51
  start-page: 341
  year: 2011
  ident: 2024061301023596800_DEV174094C18
  article-title: Isolation of Sertoli, Leydig, and spermatogenic cells from the mouse testis
  publication-title: BioTechniques
  doi: 10.2144/000113764
– volume: 14
  start-page: 2135
  year: 2004
  ident: 2024061301023596800_DEV174094C87
  article-title: BRCA1, histone H2AX phosphorylation, and male meiotic sex chromosome inactivation
  publication-title: Curr. Biol.
  doi: 10.1016/j.cub.2004.11.032
– volume: 142
  start-page: 1418
  year: 2015
  ident: 2024061301023596800_DEV174094C2
  article-title: Brg1 modulates enhancer activation in mesoderm lineage commitment
  publication-title: Development
  doi: 10.1242/dev.109496
– volume: 85
  start-page: 347
  year: 2011
  ident: 2024061301023596800_DEV174094C65
  article-title: Inhibitor of DNA binding 4 is expressed selectively by single spermatogonia in the male germline and regulates the self-renewal of spermatogonial stem cells in mice
  publication-title: Biol. Reprod.
  doi: 10.1095/biolreprod.111.091330
– volume: 94
  start-page: 8
  year: 2015
  ident: 2024061301023596800_DEV174094C76
  article-title: The mouse INO80 chromatin remodeling complex is an essential meiotic factor for spermatogenesis
  publication-title: Biol. Reprod
  doi: 10.1095/biolreprod.115.135533
– volume: 36
  start-page: 647
  year: 2004
  ident: 2024061301023596800_DEV174094C15
  article-title: Plzf is required in adult male germ cells for stem cell self-renewal
  publication-title: Nat. Genet.
  doi: 10.1038/ng1366
– volume: 125
  start-page: 315
  year: 2006
  ident: 2024061301023596800_DEV174094C10
  article-title: A bivalent chromatin structure marks key developmental genes in embryonic stem cells
  publication-title: Cell
  doi: 10.1016/j.cell.2006.02.041
– volume: 4
  start-page: 15
  year: 2013
  ident: 2024061301023596800_DEV174094C34
  article-title: EMAP/EMAPA ontology of mouse developmental anatomy: 2013 update
  publication-title: J. Biomed. Semantics
  doi: 10.1186/2041-1480-4-15
– volume: 2
  start-page: 1445
  year: 2007
  ident: 2024061301023596800_DEV174094C77
  article-title: Extraction, purification and analysis of histones
  publication-title: Nat. Protoc.
  doi: 10.1038/nprot.2007.202
– volume: 17
  start-page: 5976
  year: 1997
  ident: 2024061301023596800_DEV174094C82
  article-title: SNF2beta-BRG1 is essential for the viability of F9 murine embryonal carcinoma cells
  publication-title: Mol. Cell. Biol.
  doi: 10.1128/MCB.17.10.5976
– volume: 74
  start-page: 68
  year: 1977
  ident: 2024061301023596800_DEV174094C9
  article-title: Spermatogenic cells of the prepubertal mouse: isolation and morphological characterization
  publication-title: J. Cell Biol.
  doi: 10.1083/jcb.74.1.68
– volume: 20
  start-page: 8602
  year: 2000
  ident: 2024061301023596800_DEV174094C59
  article-title: Chromatin association of human origin recognition complex, cdc6, and minichromosome maintenance proteins during the cell cycle: assembly of prereplication complexes in late mitosis
  publication-title: Mol. Cell. Biol.
  doi: 10.1128/MCB.20.22.8602-8612.2000
– volume: 110
  start-page: 16061
  year: 2013
  ident: 2024061301023596800_DEV174094C48
  article-title: A set of genes critical to development is epigenetically poised in mouse germ cells from fetal stages through completion of meiosis
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.1315204110
– volume: 26
  start-page: 139
  year: 2010
  ident: 2024061301023596800_DEV174094C72
  article-title: edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp616
– volume: 86
  start-page: 59
  year: 2008
  ident: 2024061301023596800_DEV174094C43
  article-title: Culture of rodent spermatogonial stem cells, male germline stem cells of the postnatal animal
  publication-title: Methods Cell Biol.
  doi: 10.1016/S0091-679X(08)00004-6
– volume: 18
  start-page: 407
  year: 2017
  ident: 2024061301023596800_DEV174094C19
  article-title: Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes
  publication-title: Nat. Rev. Mol. Cell Biol
  doi: 10.1038/nrm.2017.26
– volume: 128
  start-page: 317
  year: 2014
  ident: 2024061301023596800_DEV174094C69
  article-title: BRG1 promotes the repair of DNA double-strand breaks by facilitating the replacement of RPA with RAD51
  publication-title: J. Cell Sci.
  doi: 10.1242/jcs.159103
– volume: 25
  start-page: 959
  year: 2011
  ident: 2024061301023596800_DEV174094C39
  article-title: MDC1 directs chromosome-wide silencing of the sex chromosomes in male germ cells
  publication-title: Genes Dev.
  doi: 10.1101/gad.2030811
– volume: 35
  start-page: 1157
  year: 2015
  ident: 2024061301023596800_DEV174094C45
  article-title: USP7 cooperates with SCML2 to regulate the activity of PRC1
  publication-title: Mol. Cell. Biol.
  doi: 10.1128/MCB.01197-14
– volume: 5
  start-page: 3812
  year: 2014
  ident: 2024061301023596800_DEV174094C52
  article-title: Chd5 orchestrates chromatin remodelling during sperm development
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms4812
– volume: 17
  start-page: 1972
  year: 2007
  ident: 2024061301023596800_DEV174094C64
  article-title: Human USP3 is a chromatin modifier required for s phase progression and genome stability
  publication-title: Curr. Biol.
  doi: 10.1016/j.cub.2007.10.034
– volume: 19
  start-page: 1376
  year: 2005
  ident: 2024061301023596800_DEV174094C21
  article-title: Mouse Sycp1 functions in synaptonemal complex assembly, meiotic recombination, and XY body formation
  publication-title: Genes Dev.
  doi: 10.1101/gad.329705
– volume: 22
  start-page: 3465
  year: 2011
  ident: 2024061301023596800_DEV174094C47
  article-title: Condensins I and II are essential for construction of bivalent chromosomes in mouse oocytes
  publication-title: Mol. Biol. Cell
  doi: 10.1091/mbc.e11-05-0423
– volume: 138
  start-page: 4207
  year: 2011
  ident: 2024061301023596800_DEV174094C84
  article-title: HP1 links histone methylation marks to meiotic synapsis in mice
  publication-title: Development
  doi: 10.1242/dev.064444
– volume: 5
  start-page: e1000702
  year: 2009
  ident: 2024061301023596800_DEV174094C93
  article-title: Mouse HORMAD1 and HORMAD2, two conserved meiotic chromosomal proteins, are depleted from synapsed chromosome axes with the help of TRIP13 AAA-ATPase
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1000702
– volume: 55
  start-page: 723
  year: 2013
  ident: 2024061301023596800_DEV174094C41
  article-title: Requirement for PBAF in transcriptional repression and repair at DNA breaks in actively transcribed regions of chromatin
  publication-title: Mol. Cell
  doi: 10.1016/j.molcel.2014.06.028
– volume: 87
  start-page: 2310
  year: 2002
  ident: 2024061301023596800_DEV174094C7
  article-title: Expression of platelet-derived growth factor-A (PDGF-A), PDGF-B, and PDGF receptor-α and -β during human testicular development and disease
  publication-title: J. Clin. Endocrinol. Metab.
  doi: 10.1210/jcem.87.5.8476
– volume: 27
  start-page: 1484
  year: 2013
  ident: 2024061301023596800_DEV174094C73
  article-title: ATR acts stage specifically to regulate multiple aspects of mammalian meiotic silencing
  publication-title: Genes Dev.
  doi: 10.1101/gad.219477.113
– volume: 48
  start-page: 1
  year: 2016
  ident: 2024061301023596800_DEV174094C49
  article-title: Parallel evolution of male germline epigenetic poising and somatic development in animals
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3483
– volume: 28
  start-page: 2056
  year: 2014
  ident: 2024061301023596800_DEV174094C63
  article-title: Repression of the soma-specific transcriptome by Polycomb-repressive complex 2 promotes male germ cell development
  publication-title: Genes Dev.
  doi: 10.1101/gad.246124.114
– volume: 7
  year: 2011
  ident: 2024061301023596800_DEV174094C24
  article-title: Diverse roles and interactions of the SWI/SNF chromatin remodeling complex revealed using global approaches
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1002008
– volume: 17
  start-page: 1
  year: 2016
  ident: 2024061301023596800_DEV174094C6
  article-title: Regulatory complexity revealed by integrated cytological and RNA-seq analyses of meiotic substages in mouse spermatocytes
  publication-title: BMC Genomics
  doi: 10.1186/s12864-015-2294-6
– volume: 46
  start-page: 651
  year: 2018
  ident: 2024061301023596800_DEV174094C30
  article-title: A comprehensive roadmap of murine spermatogenesis defined by single-cell RNA-seq
  publication-title: Dev. Cell
  doi: 10.1016/j.devcel.2018.07.025
– volume: 11
  start-page: e1004916
  year: 2015
  ident: 2024061301023596800_DEV174094C5
  article-title: PRDM9 drives evolutionary erosion of hotspots in Mus musculus through haplotype-specific initiation of meiotic recombination
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1004916
– volume: 485
  start-page: 642
  year: 2012
  ident: 2024061301023596800_DEV174094C13
  article-title: Genetic recombination is directed away from functional genomic elements in mice
  publication-title: Nature
  doi: 10.1038/nature11089
– volume: 86
  start-page: 186
  year: 2012
  ident: 2024061301023596800_DEV174094C90
  article-title: Essential roles of the chromatin remodeling factor Brg1 in spermatogenesis in mice
  publication-title: Biol. Reprod.
  doi: 10.1095/biolreprod.111.097097
– volume: 82
  start-page: 1103
  year: 2010
  ident: 2024061301023596800_DEV174094C94
  article-title: The POU domain transcription factor POU3F1 is an important intrinsic regulator of GDNF-induced survival and self-renewal of mouse spermatogonial stem cells1
  publication-title: Biol. Reprod.
  doi: 10.1095/biolreprod.109.083097
– volume: 109
  start-page: E481
  year: 2012
  ident: 2024061301023596800_DEV174094C54
  article-title: Compensatory functions of histone deacetylase 1 (HDAC1) and HDAC2 regulate transcription and apoptosis during mouse oocyte development
  publication-title: Proc. Natl. Acad. Sci.
  doi: 10.1073/pnas.1118403109
– volume: 139
  start-page: 1133
  year: 2012
  ident: 2024061301023596800_DEV174094C42
  article-title: An essential role for a mammalian SWI/SNF chromatin-remodeling complex during male meiosis
  publication-title: Development
  doi: 10.1242/dev.073478
– volume: 46
  start-page: 738
  year: 2008
  ident: 2024061301023596800_DEV174094C74
  article-title: Cre recombinase activity specific to postnatal, premeiotic male germ cells in transgenic mice
  publication-title: Genesis
  doi: 10.1002/dvg.20437
– volume: 463
  start-page: 474
  year: 2010
  ident: 2024061301023596800_DEV174094C37
  article-title: Chromatin remodelling during development
  publication-title: Nature
  doi: 10.1038/nature08911
– volume: 34
  start-page: 303
  year: 2015
  ident: 2024061301023596800_DEV174094C44
  article-title: ATM-mediated phosphorylation of the chromatin remodeling enzyme BRG1 modulates DNA double-strand break repair
  publication-title: Oncogene
  doi: 10.1038/onc.2013.556
– volume: 18
  start-page: 316
  year: 2010
  ident: 2024061301023596800_DEV174094C92
  article-title: Epigenetic antagonism between polycomb and SWI/SNF complexes during oncogenic transformation
  publication-title: Cancer Cell
  doi: 10.1016/j.ccr.2010.09.006
– volume: 11
  start-page: 1
  year: 2015
  ident: 2024061301023596800_DEV174094C70
  article-title: Genome-wide transcriptional regulation mediated by biochemically distinct SWI/SNF complexes
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1005748
– volume: 28
  start-page: 249
  year: 2018
  ident: 2024061301023596800_DEV174094C100
  article-title: SMC1α substitutes for many meiotic functions of SMC1β but cannot protect telomeres from damage
  publication-title: Curr. Biol.
  doi: 10.1016/j.cub.2017.12.020
– volume: 10
  start-page: 145
  year: 2015
  ident: 2024061301023596800_DEV174094C58
  article-title: SWI/SNF chromatin remodeling and human malignancies
  publication-title: Annu. Rev. Pathol. Mech. Dis.
  doi: 10.1146/annurev-pathol-012414-040445
– volume: 7
  start-page: 113
  year: 2011
  ident: 2024061301023596800_DEV174094C25
  article-title: Histone H2B ubiquitylation disrupts local and higher-order chromatin compaction
  publication-title: Nat. Chem. Biol.
  doi: 10.1038/nchembio.501
– volume: 17
  start-page: 195
  year: 2007
  ident: 2024061301023596800_DEV174094C27
  article-title: HDACs, histone deacetylation and gene transcription: From molecular biology to cancer therapeutics
  publication-title: Cell Res.
  doi: 10.1038/sj.cr.7310149
– volume: 10
  start-page: 483
  year: 2008
  ident: 2024061301023596800_DEV174094C60
  article-title: Monoubiquitinated H2B is associated with the transcribed region of highly expressed genes in human cells
  publication-title: Nat. Cell Biol.
  doi: 10.1038/ncb1712
– volume: 26
  start-page: 325
  year: 2015
  ident: 2024061301023596800_DEV174094C62
  article-title: MouseMine: a new data warehouse for MGI
  publication-title: Mamm. Genome
  doi: 10.1007/s00335-015-9573-z
– volume: 13
  start-page: 1006
  year: 2018
  ident: 2024061301023596800_DEV174094C79
  article-title: Targeted in situ genome-wide profiling with high efficiency for low cell numbers
  publication-title: Nat. Protoc.
  doi: 10.1038/nprot.2018.015
– volume: 45
  start-page: 413
  year: 2007
  ident: 2024061301023596800_DEV174094C26
  article-title: Generation of a germ cell-specific mouse transgenic Cre line, Vasa-Cre
  publication-title: Genesis
  doi: 10.1002/dvg.20310
– volume: 29
  start-page: 2553
  year: 2010
  ident: 2024061301023596800_DEV174094C55
  article-title: Ubiquitin-specific proteases 7 and 11 modulate Polycomb regulation of the INK4a tumour suppressor
  publication-title: EMBO J.
  doi: 10.1038/emboj.2010.129
– volume: 74
  start-page: 2465
  year: 2014
  ident: 2024061301023596800_DEV174094C91
  article-title: SWI/SNF factors required for cellular resistance to dna damage include arid1a and arid1b and show interdependent protein stability
  publication-title: Cancer Res.
  doi: 10.1158/0008-5472.CAN-13-3608
– volume: 24
  start-page: 455
  year: 2010
  ident: 2024061301023596800_DEV174094C95
  article-title: Histone deacetylases 1 and 2 act in concert to promote the G1-to-S progression
  publication-title: Genes Dev.
  doi: 10.1101/gad.552310
– volume: 65
  start-page: 249
  year: 1984
  ident: 2024061301023596800_DEV174094C29
  article-title: Morphological and temporal sequence of meiotic prophase development at puberty in the male mouse
  publication-title: J. Cell Sci.
  doi: 10.1242/jcs.65.1.249
– volume: 16
  start-page: 284
  year: 2012
  ident: 2024061301023596800_DEV174094C97
  article-title: clusterProfiler: an R package for comparing biological themes among gene clusters
  publication-title: Omi. A J. Integr. Biol.
  doi: 10.1089/omi.2011.0118
– volume: 34
  start-page: 525
  year: 2016
  ident: 2024061301023596800_DEV174094C12
  article-title: Near-optimal probabilistic RNA-seq quantification
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.3519
– volume: 5
  start-page: 66
  year: 1997
  ident: 2024061301023596800_DEV174094C68
  article-title: A drying-down technique for the spreading of mammalian melocytes from the male and female germline
  publication-title: Chromosom. Res.
  doi: 10.1023/A:1018445520117
– volume: 125
  start-page: 703
  year: 2006
  ident: 2024061301023596800_DEV174094C67
  article-title: Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II
  publication-title: Cell
  doi: 10.1016/j.cell.2006.04.029
– volume: 29
  start-page: 1434
  year: 2010
  ident: 2024061301023596800_DEV174094C46
  article-title: A cooperative activation loop among SWI/SNF, gamma-H2AX and H3 acetylation for DNA double-strand break repair
  publication-title: EMBO J.
  doi: 10.1038/emboj.2010.27
– volume: 55
  start-page: 201
  year: 2007
  ident: 2024061301023596800_DEV174094C50
  article-title: An essential switch in subunit composition of a chromatin remodeling complex during neural development
  publication-title: Neuron
  doi: 10.1016/j.neuron.2007.06.019
– volume: 8
  start-page: 14648
  year: 2017
  ident: 2024061301023596800_DEV174094C3
  article-title: The SWI/SNF chromatin remodelling complex is required for maintenance of lineage specific enhancers
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms14648
– volume: 6
  start-page: 6033
  year: 2015
  ident: 2024061301023596800_DEV174094C14
  article-title: An ultra-low-input native ChIP-seq protocol for genome-wide profiling of rare cell populations
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms7033
– volume: 31
  start-page: 193
  year: 2003
  ident: 2024061301023596800_DEV174094C11
  article-title: MGD: the mouse genome database
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkg047
– volume: 15
  start-page: 39
  year: 2014
  ident: 2024061301023596800_DEV174094C57
  article-title: Integrated transcriptome analysis of mouse spermatogenesis
  publication-title: BMC Genomics
  doi: 10.1186/1471-2164-15-39
– volume: 173
  start-page: 497
  year: 2006
  ident: 2024061301023596800_DEV174094C96
  article-title: Mouse SYCP2 is required for synaptonemal complex assembly and chromosomal synapsis during male meiosis
  publication-title: J. Cell Biol.
  doi: 10.1083/jcb.200603063
– volume: 110
  start-page: 10165
  year: 2013
  ident: 2024061301023596800_DEV174094C85
  article-title: Swi/Snf chromatin remodeling/tumor suppressor complex establishes nucleosome occupancy at target promoters
  publication-title: Proc. Natl. Acad. Sci.
  doi: 10.1073/pnas.1302209110
– volume: 134
  start-page: 1823
  year: 2007
  ident: 2024061301023596800_DEV174094C86
  article-title: Meiotic sex chromosome inactivation
  publication-title: Development
  doi: 10.1242/dev.000018
– volume: 33
  start-page: 265
  year: 2013
  ident: 2024061301023596800_DEV174094C17
  article-title: ARID1a-DNA interactions are required for promoter occupancy by SWI/SNF
  publication-title: Mol. Cell. Biol.
  doi: 10.1128/MCB.01008-12
– volume: 49
  start-page: 213
  year: 2017
  ident: 2024061301023596800_DEV174094C40
  article-title: Dynamics of BAF–Polycomb complex opposition on heterochromatin in normal and oncogenic states
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3734
– volume: 121
  start-page: 3456
  year: 2011
  ident: 2024061301023596800_DEV174094C28
  article-title: Foxo1 is required in mouse spermatogonial stem cells for their maintenance and the initiation of spermatogenesis
  publication-title: J. Clin. Invest.
  doi: 10.1172/JCI57984
– volume: 431
  start-page: 873
  year: 2004
  ident: 2024061301023596800_DEV174094C89
  article-title: Role of histone H2A ubiquitination in Polycomb silencing
  publication-title: Nature
  doi: 10.1038/nature02985
– volume: 69
  start-page: 853
  year: 2018
  ident: 2024061301023596800_DEV174094C22
  article-title: PRDM9 methyltransferase activity is essential for meiotic DNA double-strand break formation at its binding sites
  publication-title: Mol. Cell
  doi: 10.1016/j.molcel.2018.01.033
– volume: 17
  start-page: 695
  year: 2005
  ident: 2024061301023596800_DEV174094C88
  article-title: GMP synthetase stimulates histone H2B deubiquitylation by the epigenetic silencer USP7
  publication-title: Mol. Cell
  doi: 10.1016/j.molcel.2005.02.013
– volume: 23
  start-page: 870
  year: 2002
  ident: 2024061301023596800_DEV174094C99
  article-title: Localization of androgen and estrogen receptors in adult male mouse reproductive tract
  publication-title: J. Androl.
  doi: 10.1002/j.1939-4640.2002.tb02345.x
– volume: 30
  start-page: 2135
  year: 2011
  ident: 2024061301023596800_DEV174094C66
  article-title: Histone acetylation by CBP and p300 at double-strand break sites facilitates SWI/SNF chromatin remodeling and the recruitment of non-homologous end joining factors
  publication-title: Oncogene
  doi: 10.1038/onc.2010.592
– volume: 4
  start-page: 1521
  year: 2016
  ident: 2024061301023596800_DEV174094C80
  article-title: Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences
  publication-title: F1000Research
  doi: 10.12688/f1000research.7563.2
– volume: 95
  start-page: e52118.2
  year: 2015
  ident: 2024061301023596800_DEV174094C8
  article-title: Generation of genomic deletions in mammalian cell lines via CRISPR/Cas9
  publication-title: J. Vis. Exp.
  doi: 10.3791/52118
– volume: 32
  start-page: 574
  year: 2015
  ident: 2024061301023596800_DEV174094C33
  article-title: SCML2 establishes the male germline epigenome through regulation of histone H2A ubiquitination article SCML2 establishes the male germline epigenome through regulation of histone H2A ubiquitination
  publication-title: Dev. Cell
  doi: 10.1016/j.devcel.2015.01.014
– volume: 15
  start-page: 239
  year: 2014
  ident: 2024061301023596800_DEV174094C32
  article-title: Chromatin and transcription transitions of mammalian adult germline stem cells and spermatogenesis
  publication-title: Cell Stem Cell
  doi: 10.1016/j.stem.2014.04.006
– volume: 8
  start-page: e1002789
  year: 2012
  ident: 2024061301023596800_DEV174094C78
  article-title: Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1002789
– volume: 10
  start-page: 1213
  year: 2013
  ident: 2024061301023596800_DEV174094C16
  article-title: Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
  publication-title: Nat. Methods
  doi: 10.1038/nmeth.2688
– volume: 106
  start-page: 5181
  year: 2009
  ident: 2024061301023596800_DEV174094C38
  article-title: An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.0812889106
SSID ssj0003677
Score 2.458872
Snippet A deficiency in BRG1, the catalytic subunit of the SWI/SNF chromatin remodeling complex, results in a meiotic arrest during spermatogenesis. Here, we explore...
SourceID pubmedcentral
proquest
pubmed
crossref
SourceType Open Access Repository
Aggregation Database
Index Database
Enrichment Source
SubjectTerms Acetylation
Animals
Chromatin - metabolism
Chromosomal Proteins, Non-Histone - metabolism
DNA Helicases - metabolism
Epigenesis, Genetic
Gene Expression Regulation, Developmental
Histone Code
Lysine - metabolism
Male
Mammals - genetics
Meiosis - genetics
Mice
Models, Genetic
Nuclear Proteins - metabolism
Polycomb-Group Proteins - metabolism
Promoter Regions, Genetic
Protein Binding - genetics
Spermatogenesis - genetics
Spermatogonia - metabolism
Transcription Factors - metabolism
Transcription, Genetic
Title Mammalian SWI/SNF collaborates with a polycomb-associated protein to regulate male germline transcription in the mouse
URI https://www.ncbi.nlm.nih.gov/pubmed/31043422
https://www.proquest.com/docview/2218999282
https://pubmed.ncbi.nlm.nih.gov/PMC6803380
Volume 146
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV3db9MwELdgCMQLggGjfMkIXlAVlsbO1yOCVRus5YFWFF4iO76slbZmKtmk8ddz5zhpA30YvFSVYzlpfr-e7873wdgbsBmLg8iLUVnwpFLC00UOnpEyLnItC51TNvJoHB1O5adZOFsfxdjskkq_y39tzSv5H1RxDHGlLNl_QLZdFAfwO-KLn4gwfl4L45E6O6v9FF-_HdGZ6HjYXwMLTeYadWK4wvtrTzkwgIoDlNToknTPVd2PnkJZT6F_grLa6p4VbWOtUHHxkOQp6EQPbUQd2RPhJgdsw8UwgmXZCDfq3fRz3p-2np35Qqtag_1eLvL5YlWuOWADAGFxDm57tZ7zk-WFyxKbwMoFMTu3hc2U8vxwQ9JKOjseuGeBLWONeHYuSsfDdKvcR0UD37KBSwrQ8uu2yd3i2uMv2XB6fJxNDmaTm-xWgFYFNbz4ePS53bhFZBt1tk_hqtni2vvrlbv6y19GyZ-xtRvKyuQ-u-esDP6-pswDdgOWu-x23Xf0apfdGbmIChz8UdrBh-yyZRNHNu0jl_gmlzhxiSu-hUvccYlXJW-4xIlLvOES73CJ09Q5TiEuPWLT4cHkw6HnunJ4uYiTyhsEVCEpNgIlt4jIgMBtQppYgIBYKWmKIDR5HicQaC2Vb3SogbYKSFOIQiUesx1kHTxhHEITFqGvjSpiGZk4zfEVF2kuTQpGK91jb5t3neWuZD11TjnNyHRFXDLEJatx6bHX7dzzulDL1lmvGsgylKN0OKaWgL82C1DXRWMpSIIe26shbNdBE0gKGeCVuANuO4FqtHevLBdzW6s9SnwhEv_pNe77jN1d_1Ges51qdQEvUOOt9EvL099SCLPg
linkProvider Flying Publisher
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Mammalian+SWI%2FSNF+collaborates+with+a+polycomb-associated+protein+to+regulate+male+germline+transcription+in+the+mouse&rft.jtitle=Development+%28Cambridge%29&rft.au=Menon%2C+Debashish+U&rft.au=Shibata%2C+Yoichiro&rft.au=Mu%2C+Weipeng&rft.au=Magnuson%2C+Terry&rft.date=2019-07-05&rft.issn=1477-9129&rft.eissn=1477-9129&rft.volume=146&rft.issue=19&rft_id=info:doi/10.1242%2Fdev.174094&rft.externalDBID=NO_FULL_TEXT
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0950-1991&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0950-1991&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0950-1991&client=summon