Characterization of a thermoactive endoglucanase isolated from a biogas plant metagenome
A metagenomic library from DNA isolated from a biogas plant was constructed and screened for thermoactive endoglucanases to gain insight into the enzymatic diversity involved in plant biomass breakdown at elevated temperatures. Two cellulase-encoding genes were identified and the corresponding prote...
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Published in | Extremophiles : life under extreme conditions Vol. 23; no. 4; pp. 479 - 486 |
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Main Authors | , , , , , , |
Format | Journal Article |
Language | English |
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Springer Japan
01.07.2019
Springer Nature B.V |
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Abstract | A metagenomic library from DNA isolated from a biogas plant was constructed and screened for thermoactive endoglucanases to gain insight into the enzymatic diversity involved in plant biomass breakdown at elevated temperatures. Two cellulase-encoding genes were identified and the corresponding proteins showed sequence similarities of 59% for Cel5A to a putative cellulase from
Anaerolinea thermolimosa
and 99% for Cel5B to a characterized endoglucanase isolated from a biogas plant reactor. The cellulase Cel5A consists of one catalytical domain showing sequence similarities to glycoside hydrolase family 5 and comprises 358 amino acids with a predicted molecular mass of 41.2 kDa. The gene coding for
cel5A
was successfully cloned and expressed in
Escherichia coli
C43(DE3). The recombinant protein was purified to homogeneity using affinity chromatography with a specific activity of 182 U/mg, and a yield of 74%. Enzymatic activity was detectable towards cellulose and mannan containing substrates and over a broad temperature range from 40 °C to 70 °C and a pH range from 4.0 to 7.0 with maximal activity at 55 °C and pH 5.0. Cel5A showed high thermostability at 60 °C without loss of activity after 24 h. Due to the enzymatic characteristics, Cel5A is an attractive candidate for the degradation of lignocellulosic material. |
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AbstractList | A metagenomic library from DNA isolated from a biogas plant was constructed and screened for thermoactive endoglucanases to gain insight into the enzymatic diversity involved in plant biomass breakdown at elevated temperatures. Two cellulase-encoding genes were identified and the corresponding proteins showed sequence similarities of 59% for Cel5A to a putative cellulase from
Anaerolinea thermolimosa
and 99% for Cel5B to a characterized endoglucanase isolated from a biogas plant reactor. The cellulase Cel5A consists of one catalytical domain showing sequence similarities to glycoside hydrolase family 5 and comprises 358 amino acids with a predicted molecular mass of 41.2 kDa. The gene coding for
cel5A
was successfully cloned and expressed in
Escherichia coli
C43(DE3). The recombinant protein was purified to homogeneity using affinity chromatography with a specific activity of 182 U/mg, and a yield of 74%. Enzymatic activity was detectable towards cellulose and mannan containing substrates and over a broad temperature range from 40 °C to 70 °C and a pH range from 4.0 to 7.0 with maximal activity at 55 °C and pH 5.0. Cel5A showed high thermostability at 60 °C without loss of activity after 24 h. Due to the enzymatic characteristics, Cel5A is an attractive candidate for the degradation of lignocellulosic material. A metagenomic library from DNA isolated from a biogas plant was constructed and screened for thermoactive endoglucanases to gain insight into the enzymatic diversity involved in plant biomass breakdown at elevated temperatures. Two cellulase-encoding genes were identified and the corresponding proteins showed sequence similarities of 59% for Cel5A to a putative cellulase from Anaerolinea thermolimosa and 99% for Cel5B to a characterized endoglucanase isolated from a biogas plant reactor. The cellulase Cel5A consists of one catalytical domain showing sequence similarities to glycoside hydrolase family 5 and comprises 358 amino acids with a predicted molecular mass of 41.2 kDa. The gene coding for cel5A was successfully cloned and expressed in Escherichia coli C43(DE3). The recombinant protein was purified to homogeneity using affinity chromatography with a specific activity of 182 U/mg, and a yield of 74%. Enzymatic activity was detectable towards cellulose and mannan containing substrates and over a broad temperature range from 40 °C to 70 °C and a pH range from 4.0 to 7.0 with maximal activity at 55 °C and pH 5.0. Cel5A showed high thermostability at 60 °C without loss of activity after 24 h. Due to the enzymatic characteristics, Cel5A is an attractive candidate for the degradation of lignocellulosic material. A metagenomic library from DNA isolated from a biogas plant was constructed and screened for thermoactive endoglucanases to gain insight into the enzymatic diversity involved in plant biomass breakdown at elevated temperatures. Two cellulase-encoding genes were identified and the corresponding proteins showed sequence similarities of 59% for Cel5A to a putative cellulase from Anaerolinea thermolimosa and 99% for Cel5B to a characterized endoglucanase isolated from a biogas plant reactor. The cellulase Cel5A consists of one catalytical domain showing sequence similarities to glycoside hydrolase family 5 and comprises 358 amino acids with a predicted molecular mass of 41.2 kDa. The gene coding for cel5A was successfully cloned and expressed in Escherichia coli C43(DE3). The recombinant protein was purified to homogeneity using affinity chromatography with a specific activity of 182 U/mg, and a yield of 74%. Enzymatic activity was detectable towards cellulose and mannan containing substrates and over a broad temperature range from 40 °C to 70 °C and a pH range from 4.0 to 7.0 with maximal activity at 55 °C and pH 5.0. Cel5A showed high thermostability at 60 °C without loss of activity after 24 h. Due to the enzymatic characteristics, Cel5A is an attractive candidate for the degradation of lignocellulosic material. |
Author | Blank, Saskia Piascheck, Henning Janzer, Viktoria-Astrid Moccand, Cyril Klippel, Barbara Bel-Rhlid, Rachid Antranikian, Garabed |
Author_xml | – sequence: 1 givenname: Barbara surname: Klippel fullname: Klippel, Barbara email: barbara.klippel@tu-harburg.de organization: Institute of Technical Microbiology, Hamburg University of Technology (TUHH) – sequence: 2 givenname: Saskia surname: Blank fullname: Blank, Saskia organization: Institute of Technical Microbiology, Hamburg University of Technology (TUHH) – sequence: 3 givenname: Viktoria-Astrid surname: Janzer fullname: Janzer, Viktoria-Astrid organization: Institute of Technical Microbiology, Hamburg University of Technology (TUHH) – sequence: 4 givenname: Henning surname: Piascheck fullname: Piascheck, Henning organization: Institute of Technical Microbiology, Hamburg University of Technology (TUHH) – sequence: 5 givenname: Cyril surname: Moccand fullname: Moccand, Cyril organization: Chemistry and Biotechnology Department, Nestlé Research Center, Institute of Materials Science – sequence: 6 givenname: Rachid surname: Bel-Rhlid fullname: Bel-Rhlid, Rachid organization: Chemistry and Biotechnology Department, Nestlé Research Center, Institute of Materials Science – sequence: 7 givenname: Garabed surname: Antranikian fullname: Antranikian, Garabed organization: Institute of Technical Microbiology, Hamburg University of Technology (TUHH) |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/31119430$$D View this record in MEDLINE/PubMed |
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CitedBy_id | crossref_primary_10_3389_fgene_2020_565006 crossref_primary_10_3390_jof9020152 crossref_primary_10_1007_s13399_021_02047_y crossref_primary_10_1007_s11248_021_00236_z crossref_primary_10_1007_s13399_020_01186_y crossref_primary_10_1007_s13399_022_03423_y crossref_primary_10_1016_j_nbt_2020_06_004 crossref_primary_10_1016_j_ijbiomac_2021_08_024 |
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Keywords | Thermostability Biogas plant, metagenomic library Cellulase |
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SubjectTerms | Affinity chromatography Amino acids Analogies Biochemistry Biodegradation Biogas Biomedical and Life Sciences Biotechnology Cellulase Cellulose Construction planning Deoxyribonucleic acid DNA E coli Endoglucanase Enzymatic activity Enzyme activity Enzymes Genes Glycoside hydrolase Glycosides High temperature Hydrolase Life Sciences Lignocellulose Mannan Microbial Ecology Microbiology Molecular weight Nucleotide sequence Original Paper pH effects Plant biomass Proteins Recombinants Sequencing Space life sciences Substrates Thermal stability |
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Title | Characterization of a thermoactive endoglucanase isolated from a biogas plant metagenome |
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