Transcriptional identification of differentially expressed genes during the prepupal–pupal transition in the oriental armyworm, Mythimna separata (Walker) (Lepidoptera: Noctuidae)
The oriental armyworm, Mythimna separata (Walker) is a serious pest of agriculture that does particular damage to Gramineae crops in Asia, Europe, and Oceania. Metamorphosis is a key developmental stage in insects, although the genes underlying the metamorphic transition in M. separata remain largel...
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| Published in | Bulletin of entomological research Vol. 111; no. 4; pp. 485 - 498 |
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| Main Authors | , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
Cambridge, UK
Cambridge University Press
01.08.2021
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| Abstract | The oriental armyworm, Mythimna separata (Walker) is a serious pest of agriculture that does particular damage to Gramineae crops in Asia, Europe, and Oceania. Metamorphosis is a key developmental stage in insects, although the genes underlying the metamorphic transition in M. separata remain largely unknown. Here, we sequenced the transcriptomes of five stages; mature larvae (ML), wandering (W), and pupation (1, 5, and 10 days after pupation, designated P1, P5, and P10) to identify transition-associated genes. Four libraries were generated, with 22,884, 23,534, 26,643, and 33,238 differentially expressed genes (DEGs) for the ML-vs-W, W-vs-P1, P1-vs-P5, and P5-vs-P10, respectively. Gene ontology enrichment analysis of DEGs showed that genes regulating the biosynthesis of the membrane and integral components of the membrane, which includes the cuticular protein (CP), 20-hydroxyecdysone (20E), and juvenile hormone (JH) biosynthesis, were enriched. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis indicated that DEGs were enriched in the metabolic pathways. Of these DEGs, thirty CP, seventeen 20E, and seven JH genes were differentially expressed across the developmental stages. For transcriptome validation, ten CP, 20E, and JH-related genes were selected and verified by real-time PCR quantitative. Collectively, our results provided a basis for further studies of the molecular mechanism of metamorphosis in M. separata. |
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| AbstractList | The oriental armyworm, Mythimna separata (Walker) is a serious pest of agriculture that does particular damage to Gramineae crops in Asia, Europe, and Oceania. Metamorphosis is a key developmental stage in insects, although the genes underlying the metamorphic transition in M. separata remain largely unknown. Here, we sequenced the transcriptomes of five stages; mature larvae (ML), wandering (W), and pupation (1, 5, and 10 days after pupation, designated P1, P5, and P10) to identify transition-associated genes. Four libraries were generated, with 22,884, 23,534, 26,643, and 33,238 differentially expressed genes (DEGs) for the ML-vs-W, W-vs-P1, P1-vs-P5, and P5-vs-P10, respectively. Gene ontology enrichment analysis of DEGs showed that genes regulating the biosynthesis of the membrane and integral components of the membrane, which includes the cuticular protein (CP), 20-hydroxyecdysone (20E), and juvenile hormone (JH) biosynthesis, were enriched. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis indicated that DEGs were enriched in the metabolic pathways. Of these DEGs, thirty CP, seventeen 20E, and seven JH genes were differentially expressed across the developmental stages. For transcriptome validation, ten CP, 20E, and JH-related genes were selected and verified by real-time PCR quantitative. Collectively, our results provided a basis for further studies of the molecular mechanism of metamorphosis in M. separata. Abstract The oriental armyworm, Mythimna separata (Walker) is a serious pest of agriculture that does particular damage to Gramineae crops in Asia, Europe, and Oceania. Metamorphosis is a key developmental stage in insects, although the genes underlying the metamorphic transition in M. separata remain largely unknown. Here, we sequenced the transcriptomes of five stages; mature larvae (ML), wandering (W), and pupation (1, 5, and 10 days after pupation, designated P1, P5, and P10) to identify transition-associated genes. Four libraries were generated, with 22,884, 23,534, 26,643, and 33,238 differentially expressed genes (DEGs) for the ML-vs-W, W-vs-P1, P1-vs-P5, and P5-vs-P10, respectively. Gene ontology enrichment analysis of DEGs showed that genes regulating the biosynthesis of the membrane and integral components of the membrane, which includes the cuticular protein (CP), 20-hydroxyecdysone (20E), and juvenile hormone (JH) biosynthesis, were enriched. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis indicated that DEGs were enriched in the metabolic pathways. Of these DEGs, thirty CP, seventeen 20E, and seven JH genes were differentially expressed across the developmental stages. For transcriptome validation, ten CP, 20E, and JH-related genes were selected and verified by real-time PCR quantitative. Collectively, our results provided a basis for further studies of the molecular mechanism of metamorphosis in M. separata . |
| Author | Tan, Xiaoling Yang, Xueqing Wang, Wei Li, Xinru Wang, Xiaoqi Li, Peirong |
| Author_xml | – sequence: 1 givenname: Peirong surname: Li fullname: Li, Peirong organization: 1College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, Liaoning, China – sequence: 2 givenname: Xinru surname: Li fullname: Li, Xinru organization: 1College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, Liaoning, China – sequence: 3 givenname: Wei surname: Wang fullname: Wang, Wei organization: 1College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, Liaoning, China – sequence: 4 givenname: Xiaoling surname: Tan fullname: Tan, Xiaoling email: sling233@hotmail.com organization: 3State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China – sequence: 5 givenname: Xiaoqi surname: Wang fullname: Wang, Xiaoqi organization: 1College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, Liaoning, China – sequence: 6 givenname: Xueqing orcidid: 0000-0002-3919-8013 surname: Yang fullname: Yang, Xueqing email: sling233@hotmail.com organization: 1College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, Liaoning, China |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/33745467$$D View this record in MEDLINE/PubMed |
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| CitedBy_id | crossref_primary_10_3389_fgene_2021_795115 crossref_primary_10_1093_jee_toad053 |
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| Keywords | pupation transcriptome analysis Gene expression metamorphosis Mythimna separata |
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| Snippet | The oriental armyworm, Mythimna separata (Walker) is a serious pest of agriculture that does particular damage to Gramineae crops in Asia, Europe, and Oceania.... Abstract The oriental armyworm, Mythimna separata (Walker) is a serious pest of agriculture that does particular damage to Gramineae crops in Asia, Europe, and... |
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| SubjectTerms | Adults Biosynthesis Crop damage Developmental stages DNA Encyclopaedias Encyclopedias Enrichment Gene expression Genes Genetic engineering Genomes Hormones Insects Juvenile hormones Larvae Membranes Metabolic pathways Metamorphosis Morphology Mythimna separata Nucleotide sequence PCR Pest control Proteins Pupation Research Paper Transcription Transcriptomes |
| Title | Transcriptional identification of differentially expressed genes during the prepupal–pupal transition in the oriental armyworm, Mythimna separata (Walker) (Lepidoptera: Noctuidae) |
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