Automated explainable wavelet-based sleep scoring system for a population suspected with insomnia, apnea and periodic leg movement
Sleep is an integral and vital component of human life, contributing significantly to overall health and well-being, but a considerable number of people worldwide experience sleep disorders. Sleep disorder diagnosis heavily depends on accurately classifying sleep stages. Traditionally, this classifi...
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Published in | Medical engineering & physics Vol. 130; p. 104208 |
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Main Authors | , , , , , |
Format | Journal Article |
Language | English |
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England
Elsevier Ltd
01.08.2024
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Abstract | Sleep is an integral and vital component of human life, contributing significantly to overall health and well-being, but a considerable number of people worldwide experience sleep disorders. Sleep disorder diagnosis heavily depends on accurately classifying sleep stages. Traditionally, this classification has been performed manually by trained sleep technologists that visually inspect polysomnography records. However, in order to mitigate the labor-intensive nature of this process, automated approaches have been developed. These automated methods aim to streamline and facilitate sleep stage classification. This study aims to classify sleep stages in a dataset comprising subjects with insomnia, PLM, and sleep apnea. The dataset consists of PSG recordings from the multi-ethnic study of atherosclerosis (MESA) cohort of the national sleep research resource (NSRR), including 2056 subjects. Among these subjects, 130 have insomnia, 39 suffer from PLM, 156 have sleep apnea, and the remaining 1731 are classified as good sleepers. This study proposes an automated computerized technique to classify sleep stages, developing a machine-learning model with explainable artificial intelligence (XAI) capabilities using wavelet-based Hjorth parameters. An optimal biorthogonal wavelet filter bank (BOWFB) has been employed to extract subbands (SBs) from 30 seconds of electroencephalogram (EEG) epochs. Three EEG channels, namely: Fz_Cz, Cz_Oz, and C4_M1, are employed to yield an optimum outcome. The Hjorth parameters extracted from SBs were then fed to different machine learning algorithms. To gain an understanding of the model, in this study, we used SHAP (Shapley Additive explanations) method. For subjects suffering from the aforementioned diseases, the model utilized features derived from all channels and employed an ensembled bagged trees (EnBT) classifier. The highest accuracy of 86.8%, 87.3%, 85.0%, 84.5%, and 83.8% is obtained for the insomniac, PLM, apniac, good sleepers and complete datasets, respectively. Using these techniques and datasets, the study aims to enhance sleep stage classification accuracy and improve understanding of sleep disorders such as insomnia, PLM, and sleep apnea.
•Automated sleep scoring system using multi-ethnic and diverse large database called MESA.•Model developed using subjects suffering from sleep disorders such as insomnia, PLM, and sleep apnea.•The system provides transparent explanations for assigned sleep stages using Explainable AI using.•Developed a novel biorthogonal wavelet-based system to accurately identify sleep stages.•The developed model is superior to existing state-of-art techniques. |
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AbstractList | Sleep is an integral and vital component of human life, contributing significantly to overall health and well-being, but a considerable number of people worldwide experience sleep disorders. Sleep disorder diagnosis heavily depends on accurately classifying sleep stages. Traditionally, this classification has been performed manually by trained sleep technologists that visually inspect polysomnography records. However, in order to mitigate the labor-intensive nature of this process, automated approaches have been developed. These automated methods aim to streamline and facilitate sleep stage classification. This study aims to classify sleep stages in a dataset comprising subjects with insomnia, PLM, and sleep apnea. The dataset consists of PSG recordings from the multi-ethnic study of atherosclerosis (MESA) cohort of the national sleep research resource (NSRR), including 2056 subjects. Among these subjects, 130 have insomnia, 39 suffer from PLM, 156 have sleep apnea, and the remaining 1731 are classified as good sleepers. This study proposes an automated computerized technique to classify sleep stages, developing a machine-learning model with explainable artificial intelligence (XAI) capabilities using wavelet-based Hjorth parameters. An optimal biorthogonal wavelet filter bank (BOWFB) has been employed to extract subbands (SBs) from 30 seconds of electroencephalogram (EEG) epochs. Three EEG channels, namely: Fz_Cz, Cz_Oz, and C4_M1, are employed to yield an optimum outcome. The Hjorth parameters extracted from SBs were then fed to different machine learning algorithms. To gain an understanding of the model, in this study, we used SHAP (Shapley Additive explanations) method. For subjects suffering from the aforementioned diseases, the model utilized features derived from all channels and employed an ensembled bagged trees (EnBT) classifier. The highest accuracy of 86.8%, 87.3%, 85.0%, 84.5%, and 83.8% is obtained for the insomniac, PLM, apniac, good sleepers and complete datasets, respectively. Using these techniques and datasets, the study aims to enhance sleep stage classification accuracy and improve understanding of sleep disorders such as insomnia, PLM, and sleep apnea.
•Automated sleep scoring system using multi-ethnic and diverse large database called MESA.•Model developed using subjects suffering from sleep disorders such as insomnia, PLM, and sleep apnea.•The system provides transparent explanations for assigned sleep stages using Explainable AI using.•Developed a novel biorthogonal wavelet-based system to accurately identify sleep stages.•The developed model is superior to existing state-of-art techniques. Sleep is an integral and vital component of human life, contributing significantly to overall health and well-being, but a considerable number of people worldwide experience sleep disorders. Sleep disorder diagnosis heavily depends on accurately classifying sleep stages. Traditionally, this classification has been performed manually by trained sleep technologists that visually inspect polysomnography records. However, in order to mitigate the labor-intensive nature of this process, automated approaches have been developed. These automated methods aim to streamline and facilitate sleep stage classification. This study aims to classify sleep stages in a dataset comprising subjects with insomnia, PLM, and sleep apnea. The dataset consists of PSG recordings from the multi-ethnic study of atherosclerosis (MESA) cohort of the national sleep research resource (NSRR), including 2056 subjects. Among these subjects, 130 have insomnia, 39 suffer from PLM, 156 have sleep apnea, and the remaining 1731 are classified as good sleepers. This study proposes an automated computerized technique to classify sleep stages, developing a machine-learning model with explainable artificial intelligence (XAI) capabilities using wavelet-based Hjorth parameters. An optimal biorthogonal wavelet filter bank (BOWFB) has been employed to extract subbands (SBs) from 30 seconds of electroencephalogram (EEG) epochs. Three EEG channels, namely: Fz_Cz, Cz_Oz, and C4_M1, are employed to yield an optimum outcome. The Hjorth parameters extracted from SBs were then fed to different machine learning algorithms. To gain an understanding of the model, in this study, we used SHAP (Shapley Additive explanations) method. For subjects suffering from the aforementioned diseases, the model utilized features derived from all channels and employed an ensembled bagged trees (EnBT) classifier. The highest accuracy of 86.8%, 87.3%, 85.0%, 84.5%, and 83.8% is obtained for the insomniac, PLM, apniac, good sleepers and complete datasets, respectively. Using these techniques and datasets, the study aims to enhance sleep stage classification accuracy and improve understanding of sleep disorders such as insomnia, PLM, and sleep apnea.Sleep is an integral and vital component of human life, contributing significantly to overall health and well-being, but a considerable number of people worldwide experience sleep disorders. Sleep disorder diagnosis heavily depends on accurately classifying sleep stages. Traditionally, this classification has been performed manually by trained sleep technologists that visually inspect polysomnography records. However, in order to mitigate the labor-intensive nature of this process, automated approaches have been developed. These automated methods aim to streamline and facilitate sleep stage classification. This study aims to classify sleep stages in a dataset comprising subjects with insomnia, PLM, and sleep apnea. The dataset consists of PSG recordings from the multi-ethnic study of atherosclerosis (MESA) cohort of the national sleep research resource (NSRR), including 2056 subjects. Among these subjects, 130 have insomnia, 39 suffer from PLM, 156 have sleep apnea, and the remaining 1731 are classified as good sleepers. This study proposes an automated computerized technique to classify sleep stages, developing a machine-learning model with explainable artificial intelligence (XAI) capabilities using wavelet-based Hjorth parameters. An optimal biorthogonal wavelet filter bank (BOWFB) has been employed to extract subbands (SBs) from 30 seconds of electroencephalogram (EEG) epochs. Three EEG channels, namely: Fz_Cz, Cz_Oz, and C4_M1, are employed to yield an optimum outcome. The Hjorth parameters extracted from SBs were then fed to different machine learning algorithms. To gain an understanding of the model, in this study, we used SHAP (Shapley Additive explanations) method. For subjects suffering from the aforementioned diseases, the model utilized features derived from all channels and employed an ensembled bagged trees (EnBT) classifier. The highest accuracy of 86.8%, 87.3%, 85.0%, 84.5%, and 83.8% is obtained for the insomniac, PLM, apniac, good sleepers and complete datasets, respectively. Using these techniques and datasets, the study aims to enhance sleep stage classification accuracy and improve understanding of sleep disorders such as insomnia, PLM, and sleep apnea. Sleep is an integral and vital component of human life, contributing significantly to overall health and well-being, but a considerable number of people worldwide experience sleep disorders. Sleep disorder diagnosis heavily depends on accurately classifying sleep stages. Traditionally, this classification has been performed manually by trained sleep technologists that visually inspect polysomnography records. However, in order to mitigate the labor-intensive nature of this process, automated approaches have been developed. These automated methods aim to streamline and facilitate sleep stage classification. This study aims to classify sleep stages in a dataset comprising subjects with insomnia, PLM, and sleep apnea. The dataset consists of PSG recordings from the multi-ethnic study of atherosclerosis (MESA) cohort of the national sleep research resource (NSRR), including 2056 subjects. Among these subjects, 130 have insomnia, 39 suffer from PLM, 156 have sleep apnea, and the remaining 1731 are classified as good sleepers. This study proposes an automated computerized technique to classify sleep stages, developing a machine-learning model with explainable artificial intelligence (XAI) capabilities using wavelet-based Hjorth parameters. An optimal biorthogonal wavelet filter bank (BOWFB) has been employed to extract subbands (SBs) from 30 seconds of electroencephalogram (EEG) epochs. Three EEG channels, namely: Fz_Cz, Cz_Oz, and C4_M1, are employed to yield an optimum outcome. The Hjorth parameters extracted from SBs were then fed to different machine learning algorithms. To gain an understanding of the model, in this study, we used SHAP (Shapley Additive explanations) method. For subjects suffering from the aforementioned diseases, the model utilized features derived from all channels and employed an ensembled bagged trees (EnBT) classifier. The highest accuracy of 86.8%, 87.3%, 85.0%, 84.5%, and 83.8% is obtained for the insomniac, PLM, apniac, good sleepers and complete datasets, respectively. Using these techniques and datasets, the study aims to enhance sleep stage classification accuracy and improve understanding of sleep disorders such as insomnia, PLM, and sleep apnea. |
ArticleNumber | 104208 |
Author | Sharma, Manish Verma, Shresth Sharma, Nishant Rajendra Acharya, U. Ingle, Manisha Bhurane, Ankit |
Author_xml | – sequence: 1 givenname: Manisha surname: Ingle fullname: Ingle, Manisha email: dt22ece003@students.vnit.ac.in organization: Department of Electronics and Communication Engineering, Visvesvaraya National Institute of Technology, Nagpur-440010, Maharashtra, India – sequence: 2 givenname: Manish orcidid: 0000-0002-2266-5332 surname: Sharma fullname: Sharma, Manish email: manishsharma.iitb@gmail.com organization: Department of Electrical and Computer Science Engineering, and Centre of Advanced Defence Technology (CADT), Institute of Infrastructure, Technology, Research and Management (IITRAM), Ahmedabad-380026, Gujrat, India – sequence: 3 givenname: Shresth surname: Verma fullname: Verma, Shresth email: shresth.verma.19e@iitram.ac.in organization: Department of Electrical and Computer Science Engineering, and Centre of Advanced Defence Technology (CADT), Institute of Infrastructure, Technology, Research and Management (IITRAM), Ahmedabad-380026, Gujrat, India – sequence: 4 givenname: Nishant surname: Sharma fullname: Sharma, Nishant email: nishant.sharma.21me@iitram.ac.in organization: Department of Electrical and Computer Science Engineering, and Centre of Advanced Defence Technology (CADT), Institute of Infrastructure, Technology, Research and Management (IITRAM), Ahmedabad-380026, Gujrat, India – sequence: 5 givenname: Ankit orcidid: 0000-0001-8181-7685 surname: Bhurane fullname: Bhurane, Ankit email: ankitbhurane@ece.vnit.ac.in organization: Department of Electronics and Communication Engineering, Visvesvaraya National Institute of Technology, Nagpur-440010, Maharashtra, India – sequence: 6 givenname: U. surname: Rajendra Acharya fullname: Rajendra Acharya, U. email: Rajendra.Acharya@usq.edu.au organization: School of Mathematics, Physics and Computing, University of Southern Queensland, Springfield, Australia |
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24 Berry (10.1016/j.medengphy.2024.104208_br0090) 2018 Remeseiro (10.1016/j.medengphy.2024.104208_br0560) 2019; 112 Lewis (10.1016/j.medengphy.2024.104208_br0480) 1998 Cortes (10.1016/j.medengphy.2024.104208_br0500) 1995; 20 Nohara (10.1016/j.medengphy.2024.104208_br0580) Sharma (10.1016/j.medengphy.2024.104208_br0420) 2024; 34 Sharma (10.1016/j.medengphy.2024.104208_br0550) 2016; 35 Murarka (10.1016/j.medengphy.2024.104208_br0070) 2022; 146 Ingle (10.1016/j.medengphy.2024.104208_br0620) 2023 Sharma (10.1016/j.medengphy.2024.104208_br0150) 2021; 10 Sateia (10.1016/j.medengphy.2024.104208_br0040) 2014; 146 Sharma (10.1016/j.medengphy.2024.104208_br0060) 2023 Sharma (10.1016/j.medengphy.2024.104208_br0130) 2022; 32 Goshtasbi (10.1016/j.medengphy.2024.104208_br0300) 2022; 30 Guillot (10.1016/j.medengphy.2024.104208_br0640) 2020; 28 Zhou (10.1016/j.medengphy.2024.104208_br0510) 2019 Li (10.1016/j.medengphy.2024.104208_br0520) 2009 Friedman (10.1016/j.medengphy.2024.104208_br0530) 1977; 3 Bresch (10.1016/j.medengphy.2024.104208_br0250) 2018; 12 Sharma (10.1016/j.medengphy.2024.104208_br0390) 2010 Sharma (10.1016/j.medengphy.2024.104208_br0100) 2021; 18 Tsinalis (10.1016/j.medengphy.2024.104208_br0280) NSSR (10.1016/j.medengphy.2024.104208_br0350) Hassan (10.1016/j.medengphy.2024.104208_br0240) 2017; 140 Olson (10.1016/j.medengphy.2024.104208_br0360) 2016; 11 Oh (10.1016/j.medengphy.2024.104208_br0430) 2014; 2 Sharma (10.1016/j.medengphy.2024.104208_br0080) 2022 Perslev (10.1016/j.medengphy.2024.104208_br0310) 2021; 4 Loh (10.1016/j.medengphy.2024.104208_br0570) 2022 Widasari (10.1016/j.medengphy.2024.104208_br0650) 2020; 9 |
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SubjectTerms | Aged Automation Female Humans Male Middle Aged Nocturnal Myoclonus Syndrome - diagnosis Nocturnal Myoclonus Syndrome - physiopathology Polysomnography Signal Processing, Computer-Assisted Sleep - physiology Sleep Apnea Syndromes - diagnosis Sleep Apnea Syndromes - physiopathology Sleep Initiation and Maintenance Disorders - diagnosis Sleep Initiation and Maintenance Disorders - physiopathology Sleep Stages Wavelet Analysis |
Title | Automated explainable wavelet-based sleep scoring system for a population suspected with insomnia, apnea and periodic leg movement |
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