Effects of illumination on nirS denitrifying and anammox bacteria in the rhizosphere of submerged macrophytes
Visibility in lakes can decrease due to increases in the amounts of suspended solids and algae, which inhibits the growth of submerged macrophytes. However, the understanding about whether illumination reduction affects the nitrogen-cycling microorganisms in the rhizosphere of submerged macrophytes,...
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Published in | The Science of the total environment Vol. 760; p. 143420 |
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Main Authors | , , , , , , , , , , |
Format | Journal Article |
Language | English |
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Elsevier B.V
15.03.2021
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Abstract | Visibility in lakes can decrease due to increases in the amounts of suspended solids and algae, which inhibits the growth of submerged macrophytes. However, the understanding about whether illumination reduction affects the nitrogen-cycling microorganisms in the rhizosphere of submerged macrophytes, is limited. The abundance and biodiversity of nirS denitrifying and anammox bacteria in the rhizosphere of Potamogeton crispus were studied under 0% (natural light), 20%, 40%, and 60% shading treatments. The abundance of the nirS gene was highest under 60% shading treatment, while the anammox 16S rRNA gene was highest under 40% shading treatment. Moreover, the abundance of the two genes were lower under natural light than under shading conditions during most sampling periods. The quantitative ratio of the two gene (anammox 16S rRNA to nirS gene) abundance fluctuated wildly with the distance away from the roots, under natural light and 20% shading treatment. However, the ratio varied relatively little under 40% and 60% shading treatments. The diversity of nirS denitrifying bacteria was high in the rhizosphere, while the diversity of anammox bacteria was low, and Candidatus Brocadia fulgida was dominant. This study revealed that illumination reduction not only facilitated the growth of nirS denitrifying and anammox bacteria in the rhizosphere, but also weakened the competition between the two bacteria.
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•Shading increased the abundance of nirS and anammox 16S rRNA genes in rhizosphere.•Shading changed the interspecific relationship of denitrifying and anammox bacteria.•The diversity of nirS denitrifying bacteria was high.•The diversity of anammox bacteria was low. |
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AbstractList | Visibility in lakes can decrease due to increases in the amounts of suspended solids and algae, which inhibits the growth of submerged macrophytes. However, the understanding about whether illumination reduction affects the nitrogen-cycling microorganisms in the rhizosphere of submerged macrophytes, is limited. The abundance and biodiversity of nirS denitrifying and anammox bacteria in the rhizosphere of Potamogeton crispus were studied under 0% (natural light), 20%, 40%, and 60% shading treatments. The abundance of the nirS gene was highest under 60% shading treatment, while the anammox 16S rRNA gene was highest under 40% shading treatment. Moreover, the abundance of the two genes were lower under natural light than under shading conditions during most sampling periods. The quantitative ratio of the two gene (anammox 16S rRNA to nirS gene) abundance fluctuated wildly with the distance away from the roots, under natural light and 20% shading treatment. However, the ratio varied relatively little under 40% and 60% shading treatments. The diversity of nirS denitrifying bacteria was high in the rhizosphere, while the diversity of anammox bacteria was low, and Candidatus Brocadia fulgida was dominant. This study revealed that illumination reduction not only facilitated the growth of nirS denitrifying and anammox bacteria in the rhizosphere, but also weakened the competition between the two bacteria. Visibility in lakes can decrease due to increases in the amounts of suspended solids and algae, which inhibits the growth of submerged macrophytes. However, the understanding about whether illumination reduction affects the nitrogen-cycling microorganisms in the rhizosphere of submerged macrophytes, is limited. The abundance and biodiversity of nirS denitrifying and anammox bacteria in the rhizosphere of Potamogeton crispus were studied under 0% (natural light), 20%, 40%, and 60% shading treatments. The abundance of the nirS gene was highest under 60% shading treatment, while the anammox 16S rRNA gene was highest under 40% shading treatment. Moreover, the abundance of the two genes were lower under natural light than under shading conditions during most sampling periods. The quantitative ratio of the two gene (anammox 16S rRNA to nirS gene) abundance fluctuated wildly with the distance away from the roots, under natural light and 20% shading treatment. However, the ratio varied relatively little under 40% and 60% shading treatments. The diversity of nirS denitrifying bacteria was high in the rhizosphere, while the diversity of anammox bacteria was low, and Candidatus Brocadia fulgida was dominant. This study revealed that illumination reduction not only facilitated the growth of nirS denitrifying and anammox bacteria in the rhizosphere, but also weakened the competition between the two bacteria. [Display omitted] •Shading increased the abundance of nirS and anammox 16S rRNA genes in rhizosphere.•Shading changed the interspecific relationship of denitrifying and anammox bacteria.•The diversity of nirS denitrifying bacteria was high.•The diversity of anammox bacteria was low. |
ArticleNumber | 143420 |
Author | Yin, Xingjia Wan, Xiaoqiong Xiao, Naidong Wang, Yuchun Hua, Yumei Zhao, Jianwei Chen, Lijuan Liu, Guanglong Xiao, Yang Wang, Jing Zhu, Duanwei |
Author_xml | – sequence: 1 givenname: Yang surname: Xiao fullname: Xiao, Yang organization: Laboratory of Eco-Environmental Engineering Research, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China – sequence: 2 givenname: Xingjia surname: Yin fullname: Yin, Xingjia organization: Laboratory of Eco-Environmental Engineering Research, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China – sequence: 3 givenname: Lijuan surname: Chen fullname: Chen, Lijuan organization: Key Laboratory of Ecohydrology of Inland River Basin, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China – sequence: 4 givenname: Jing surname: Wang fullname: Wang, Jing organization: Laboratory of Eco-Environmental Engineering Research, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China – sequence: 5 givenname: Yuchun surname: Wang fullname: Wang, Yuchun email: wangyc@iwhr.com organization: Department of Water Environment, China Institute of Water Resources and Hydropower Research, Beijing 100038, China – sequence: 6 givenname: Guanglong surname: Liu fullname: Liu, Guanglong organization: Laboratory of Eco-Environmental Engineering Research, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China – sequence: 7 givenname: Yumei surname: Hua fullname: Hua, Yumei organization: Laboratory of Eco-Environmental Engineering Research, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China – sequence: 8 givenname: Xiaoqiong surname: Wan fullname: Wan, Xiaoqiong organization: Laboratory of Eco-Environmental Engineering Research, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China – sequence: 9 givenname: Naidong surname: Xiao fullname: Xiao, Naidong organization: Laboratory of Eco-Environmental Engineering Research, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China – sequence: 10 givenname: Jianwei surname: Zhao fullname: Zhao, Jianwei email: jwzhao@mail.hzau.edu.cn organization: Laboratory of Eco-Environmental Engineering Research, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China – sequence: 11 givenname: Duanwei surname: Zhu fullname: Zhu, Duanwei organization: Laboratory of Eco-Environmental Engineering Research, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China |
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CitedBy_id | crossref_primary_10_1016_j_pedsph_2024_05_003 crossref_primary_10_3390_su15075918 crossref_primary_10_1016_j_watres_2023_120144 crossref_primary_10_1016_j_margen_2022_100995 crossref_primary_10_1016_j_chemosphere_2022_133941 crossref_primary_10_1016_j_watres_2022_119434 crossref_primary_10_1016_j_jes_2021_02_033 crossref_primary_10_1021_acsestwater_2c00088 crossref_primary_10_1007_s10750_021_04662_2 crossref_primary_10_1016_j_cej_2024_151928 crossref_primary_10_1016_j_envpol_2023_121485 |
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Keywords | Rhizosphere Submerged macrophyte nirS denitrifying bacteria Shading treatment Anammox bacteria |
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SubjectTerms | Anammox bacteria Bacteria - genetics Lighting nirS denitrifying bacteria Nitrogen Oxidation-Reduction Phylogeny Potamogetonaceae Rhizosphere RNA, Ribosomal, 16S Shading treatment Submerged macrophyte |
Title | Effects of illumination on nirS denitrifying and anammox bacteria in the rhizosphere of submerged macrophytes |
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