Effects of illumination on nirS denitrifying and anammox bacteria in the rhizosphere of submerged macrophytes

Visibility in lakes can decrease due to increases in the amounts of suspended solids and algae, which inhibits the growth of submerged macrophytes. However, the understanding about whether illumination reduction affects the nitrogen-cycling microorganisms in the rhizosphere of submerged macrophytes,...

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Published inThe Science of the total environment Vol. 760; p. 143420
Main Authors Xiao, Yang, Yin, Xingjia, Chen, Lijuan, Wang, Jing, Wang, Yuchun, Liu, Guanglong, Hua, Yumei, Wan, Xiaoqiong, Xiao, Naidong, Zhao, Jianwei, Zhu, Duanwei
Format Journal Article
LanguageEnglish
Published Netherlands Elsevier B.V 15.03.2021
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Abstract Visibility in lakes can decrease due to increases in the amounts of suspended solids and algae, which inhibits the growth of submerged macrophytes. However, the understanding about whether illumination reduction affects the nitrogen-cycling microorganisms in the rhizosphere of submerged macrophytes, is limited. The abundance and biodiversity of nirS denitrifying and anammox bacteria in the rhizosphere of Potamogeton crispus were studied under 0% (natural light), 20%, 40%, and 60% shading treatments. The abundance of the nirS gene was highest under 60% shading treatment, while the anammox 16S rRNA gene was highest under 40% shading treatment. Moreover, the abundance of the two genes were lower under natural light than under shading conditions during most sampling periods. The quantitative ratio of the two gene (anammox 16S rRNA to nirS gene) abundance fluctuated wildly with the distance away from the roots, under natural light and 20% shading treatment. However, the ratio varied relatively little under 40% and 60% shading treatments. The diversity of nirS denitrifying bacteria was high in the rhizosphere, while the diversity of anammox bacteria was low, and Candidatus Brocadia fulgida was dominant. This study revealed that illumination reduction not only facilitated the growth of nirS denitrifying and anammox bacteria in the rhizosphere, but also weakened the competition between the two bacteria. [Display omitted] •Shading increased the abundance of nirS and anammox 16S rRNA genes in rhizosphere.•Shading changed the interspecific relationship of denitrifying and anammox bacteria.•The diversity of nirS denitrifying bacteria was high.•The diversity of anammox bacteria was low.
AbstractList Visibility in lakes can decrease due to increases in the amounts of suspended solids and algae, which inhibits the growth of submerged macrophytes. However, the understanding about whether illumination reduction affects the nitrogen-cycling microorganisms in the rhizosphere of submerged macrophytes, is limited. The abundance and biodiversity of nirS denitrifying and anammox bacteria in the rhizosphere of Potamogeton crispus were studied under 0% (natural light), 20%, 40%, and 60% shading treatments. The abundance of the nirS gene was highest under 60% shading treatment, while the anammox 16S rRNA gene was highest under 40% shading treatment. Moreover, the abundance of the two genes were lower under natural light than under shading conditions during most sampling periods. The quantitative ratio of the two gene (anammox 16S rRNA to nirS gene) abundance fluctuated wildly with the distance away from the roots, under natural light and 20% shading treatment. However, the ratio varied relatively little under 40% and 60% shading treatments. The diversity of nirS denitrifying bacteria was high in the rhizosphere, while the diversity of anammox bacteria was low, and Candidatus Brocadia fulgida was dominant. This study revealed that illumination reduction not only facilitated the growth of nirS denitrifying and anammox bacteria in the rhizosphere, but also weakened the competition between the two bacteria.
Visibility in lakes can decrease due to increases in the amounts of suspended solids and algae, which inhibits the growth of submerged macrophytes. However, the understanding about whether illumination reduction affects the nitrogen-cycling microorganisms in the rhizosphere of submerged macrophytes, is limited. The abundance and biodiversity of nirS denitrifying and anammox bacteria in the rhizosphere of Potamogeton crispus were studied under 0% (natural light), 20%, 40%, and 60% shading treatments. The abundance of the nirS gene was highest under 60% shading treatment, while the anammox 16S rRNA gene was highest under 40% shading treatment. Moreover, the abundance of the two genes were lower under natural light than under shading conditions during most sampling periods. The quantitative ratio of the two gene (anammox 16S rRNA to nirS gene) abundance fluctuated wildly with the distance away from the roots, under natural light and 20% shading treatment. However, the ratio varied relatively little under 40% and 60% shading treatments. The diversity of nirS denitrifying bacteria was high in the rhizosphere, while the diversity of anammox bacteria was low, and Candidatus Brocadia fulgida was dominant. This study revealed that illumination reduction not only facilitated the growth of nirS denitrifying and anammox bacteria in the rhizosphere, but also weakened the competition between the two bacteria. [Display omitted] •Shading increased the abundance of nirS and anammox 16S rRNA genes in rhizosphere.•Shading changed the interspecific relationship of denitrifying and anammox bacteria.•The diversity of nirS denitrifying bacteria was high.•The diversity of anammox bacteria was low.
ArticleNumber 143420
Author Yin, Xingjia
Wan, Xiaoqiong
Xiao, Naidong
Wang, Yuchun
Hua, Yumei
Zhao, Jianwei
Chen, Lijuan
Liu, Guanglong
Xiao, Yang
Wang, Jing
Zhu, Duanwei
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Keywords Rhizosphere
Submerged macrophyte
nirS denitrifying bacteria
Shading treatment
Anammox bacteria
Language English
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SSID ssj0000781
Score 2.4544256
Snippet Visibility in lakes can decrease due to increases in the amounts of suspended solids and algae, which inhibits the growth of submerged macrophytes. However,...
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SubjectTerms Anammox bacteria
Bacteria - genetics
Lighting
nirS denitrifying bacteria
Nitrogen
Oxidation-Reduction
Phylogeny
Potamogetonaceae
Rhizosphere
RNA, Ribosomal, 16S
Shading treatment
Submerged macrophyte
Title Effects of illumination on nirS denitrifying and anammox bacteria in the rhizosphere of submerged macrophytes
URI https://dx.doi.org/10.1016/j.scitotenv.2020.143420
https://www.ncbi.nlm.nih.gov/pubmed/33189380
https://search.proquest.com/docview/2460998744
Volume 760
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