The potential targets for metastases: a study on altered circular RNA profile in breast cancer liver metastases

To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 live...

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Published inEpigenomics Vol. 11; no. 11; pp. 1237 - 1250
Main Authors Lin, Xiaorong, Hong, Shubin, Chen, Jiewen, Chen, Wenying, Wu, Zhiyong
Format Journal Article
LanguageEnglish
Published England Future Medicine Ltd 01.08.2019
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Abstract To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 liver metastasis cells. The altered expressed circRNAs were found in BCLM tissues, compared with primary tumor tissues. These circRNAs involved in metastatic related signaling pathways. Hsa_circ_21439 and hsa_circ_11783 were verified to be the most significantly up- and downregulated circRNAs in both BCLM tissues and cells. circRNA/miRNA analysis revealed that has_circ_21439 and has_circ_11783 could act as ‘miRNA sponge’. This study provides a potential diagnosis and therapy targets for BCLM.
AbstractList Aim: To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). Materials & methods: RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 liver metastasis cells. Results: The altered expressed circRNAs were found in BCLM tissues, compared with primary tumor tissues. These circRNAs involved in metastatic related signaling pathways. Hsa_circ_21439 and hsa_circ_11783 were verified to be the most significantly up- and downregulated circRNAs in both BCLM tissues and cells. In silico circRNA/miRNA analysis revealed that has_circ_21439 and has_circ_11783 could act as ‘miRNA sponge’. Conclusion: This study provides a potential diagnosis and therapy targets for BCLM.
To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 liver metastasis cells. The altered expressed circRNAs were found in BCLM tissues, compared with primary tumor tissues. These circRNAs involved in metastatic related signaling pathways. Hsa_circ_21439 and hsa_circ_11783 were verified to be the most significantly up- and downregulated circRNAs in both BCLM tissues and cells. circRNA/miRNA analysis revealed that has_circ_21439 and has_circ_11783 could act as ‘miRNA sponge’. This study provides a potential diagnosis and therapy targets for BCLM.
Aim: To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). Materials & methods: RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 liver metastasis cells. Results: The altered expressed circRNAs were found in BCLM tissues, compared with primary tumor tissues. These circRNAs involved in metastatic related signaling pathways. Hsa_circ_21439 and hsa_circ_11783 were verified to be the most significantly up- and downregulated circRNAs in both BCLM tissues and cells. In silico circRNA/miRNA analysis revealed that has_circ_21439 and has_circ_11783 could act as 'miRNA sponge'. Conclusion: This study provides a potential diagnosis and therapy targets for BCLM.Aim: To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). Materials & methods: RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 liver metastasis cells. Results: The altered expressed circRNAs were found in BCLM tissues, compared with primary tumor tissues. These circRNAs involved in metastatic related signaling pathways. Hsa_circ_21439 and hsa_circ_11783 were verified to be the most significantly up- and downregulated circRNAs in both BCLM tissues and cells. In silico circRNA/miRNA analysis revealed that has_circ_21439 and has_circ_11783 could act as 'miRNA sponge'. Conclusion: This study provides a potential diagnosis and therapy targets for BCLM.
Author Lin, Xiaorong
Chen, Wenying
Wu, Zhiyong
Chen, Jiewen
Hong, Shubin
AuthorAffiliation 1Diagnosis & Treatment Center of Breast Diseases, Shantou Affiliated Hospital, Sun Yat-sen University, Shantou 515000, Guangdong, PR China
2BreastTumor Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou 510120, PR China
3Department of Endocrinology, The First Affiliated Hospital, Sun Yat-Sen University, Guangzhou 510030, PR China
AuthorAffiliation_xml – name: 1Diagnosis & Treatment Center of Breast Diseases, Shantou Affiliated Hospital, Sun Yat-sen University, Shantou 515000, Guangdong, PR China
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– name: 3Department of Endocrinology, The First Affiliated Hospital, Sun Yat-Sen University, Guangzhou 510030, PR China
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Keywords hsa-circ-11783
miRNA sponge
circRNA
breast cancer
circRNA/miRNA network
hsa-circ-21439
epigenetics
expression profile
liver metastases
sequencing
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Snippet To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). RNA sequences were used to identify the altered expression profile of...
Aim: To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). Materials & methods: RNA sequences were used to identify the...
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SubjectTerms Breast cancer
Cancer therapies
circRNA
circRNA/miRNA network
Circular RNA
epigenetics
expression profile
Gene expression
Gene sequencing
Genes
Hepatocytes
hsa-circ-11783
hsa-circ-21439
Identification methods
Laboratory animals
Liver
Liver cancer
liver metastases
Metastases
Metastasis
miRNA
miRNA sponge
sequencing
Title The potential targets for metastases: a study on altered circular RNA profile in breast cancer liver metastases
URI http://dx.doi.org/10.2217/epi-2019-0099
https://www.ncbi.nlm.nih.gov/pubmed/31293174
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