The potential targets for metastases: a study on altered circular RNA profile in breast cancer liver metastases
To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 live...
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Published in | Epigenomics Vol. 11; no. 11; pp. 1237 - 1250 |
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Main Authors | , , , , |
Format | Journal Article |
Language | English |
Published |
England
Future Medicine Ltd
01.08.2019
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Abstract | To export the expression profile of circRNAs in breast cancer liver metastases (BCLM).
RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 liver metastasis cells.
The altered expressed circRNAs were found in BCLM tissues, compared with primary tumor tissues. These circRNAs involved in metastatic related signaling pathways. Hsa_circ_21439 and hsa_circ_11783 were verified to be the most significantly up- and downregulated circRNAs in both BCLM tissues and cells.
circRNA/miRNA analysis revealed that has_circ_21439 and has_circ_11783 could act as ‘miRNA sponge’.
This study provides a potential diagnosis and therapy targets for BCLM. |
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AbstractList | Aim: To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). Materials & methods: RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 liver metastasis cells. Results: The altered expressed circRNAs were found in BCLM tissues, compared with primary tumor tissues. These circRNAs involved in metastatic related signaling pathways. Hsa_circ_21439 and hsa_circ_11783 were verified to be the most significantly up- and downregulated circRNAs in both BCLM tissues and cells. In silico circRNA/miRNA analysis revealed that has_circ_21439 and has_circ_11783 could act as ‘miRNA sponge’. Conclusion: This study provides a potential diagnosis and therapy targets for BCLM. To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 liver metastasis cells. The altered expressed circRNAs were found in BCLM tissues, compared with primary tumor tissues. These circRNAs involved in metastatic related signaling pathways. Hsa_circ_21439 and hsa_circ_11783 were verified to be the most significantly up- and downregulated circRNAs in both BCLM tissues and cells. circRNA/miRNA analysis revealed that has_circ_21439 and has_circ_11783 could act as ‘miRNA sponge’. This study provides a potential diagnosis and therapy targets for BCLM. Aim: To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). Materials & methods: RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 liver metastasis cells. Results: The altered expressed circRNAs were found in BCLM tissues, compared with primary tumor tissues. These circRNAs involved in metastatic related signaling pathways. Hsa_circ_21439 and hsa_circ_11783 were verified to be the most significantly up- and downregulated circRNAs in both BCLM tissues and cells. In silico circRNA/miRNA analysis revealed that has_circ_21439 and has_circ_11783 could act as 'miRNA sponge'. Conclusion: This study provides a potential diagnosis and therapy targets for BCLM.Aim: To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). Materials & methods: RNA sequences were used to identify the altered expression profile of circRNAs in BCLM tissues and 231 liver metastasis cells. Quantitative PCR verified the expression of circRNAs in both BCLM tissues and 231 liver metastasis cells. Results: The altered expressed circRNAs were found in BCLM tissues, compared with primary tumor tissues. These circRNAs involved in metastatic related signaling pathways. Hsa_circ_21439 and hsa_circ_11783 were verified to be the most significantly up- and downregulated circRNAs in both BCLM tissues and cells. In silico circRNA/miRNA analysis revealed that has_circ_21439 and has_circ_11783 could act as 'miRNA sponge'. Conclusion: This study provides a potential diagnosis and therapy targets for BCLM. |
Author | Lin, Xiaorong Chen, Wenying Wu, Zhiyong Chen, Jiewen Hong, Shubin |
AuthorAffiliation | 1Diagnosis & Treatment Center of Breast Diseases, Shantou Affiliated Hospital, Sun Yat-sen University, Shantou 515000, Guangdong, PR China 2BreastTumor Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou 510120, PR China 3Department of Endocrinology, The First Affiliated Hospital, Sun Yat-Sen University, Guangzhou 510030, PR China |
AuthorAffiliation_xml | – name: 1Diagnosis & Treatment Center of Breast Diseases, Shantou Affiliated Hospital, Sun Yat-sen University, Shantou 515000, Guangdong, PR China – name: 2BreastTumor Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou 510120, PR China – name: 3Department of Endocrinology, The First Affiliated Hospital, Sun Yat-Sen University, Guangzhou 510030, PR China |
Author_xml | – sequence: 1 givenname: Xiaorong surname: Lin fullname: Lin, Xiaorong organization: Diagnosis & Treatment Center of Breast Diseases, Shantou Affiliated Hospital, Sun Yat-sen University, Shantou515000, Guangdong, PR China, BreastTumor Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou510120, PR China – sequence: 2 givenname: Shubin surname: Hong fullname: Hong, Shubin organization: Department of Endocrinology, The First Affiliated Hospital, Sun Yat-Sen University, Guangzhou510030, PR China – sequence: 3 givenname: Jiewen surname: Chen fullname: Chen, Jiewen organization: BreastTumor Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou510120, PR China – sequence: 4 givenname: Wenying surname: Chen fullname: Chen, Wenying organization: BreastTumor Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou510120, PR China – sequence: 5 givenname: Zhiyong orcidid: 0000-0003-2535-1619 surname: Wu fullname: Wu, Zhiyong organization: Diagnosis & Treatment Center of Breast Diseases, Shantou Affiliated Hospital, Sun Yat-sen University, Shantou515000, Guangdong, PR China |
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Snippet | To export the expression profile of circRNAs in breast cancer liver metastases (BCLM).
RNA sequences were used to identify the altered expression profile of... Aim: To export the expression profile of circRNAs in breast cancer liver metastases (BCLM). Materials & methods: RNA sequences were used to identify the... |
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SubjectTerms | Breast cancer Cancer therapies circRNA circRNA/miRNA network Circular RNA epigenetics expression profile Gene expression Gene sequencing Genes Hepatocytes hsa-circ-11783 hsa-circ-21439 Identification methods Laboratory animals Liver Liver cancer liver metastases Metastases Metastasis miRNA miRNA sponge sequencing |
Title | The potential targets for metastases: a study on altered circular RNA profile in breast cancer liver metastases |
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