Key virulence factors responsible for differences in pathogenicity between clinically proven live-attenuated Japanese encephalitis vaccine SA14-14-2 and its pre-attenuated highly virulent parent SA14
Japanese encephalitis virus (JEV), a neuroinvasive and neurovirulent orthoflavivirus, can be prevented in humans with the SA 14 -14-2 vaccine, a live-attenuated version derived from the wild-type SA 14 strain. To determine the viral factors responsible for the differences in pathogenicity between SA...
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Published in | PLoS pathogens Vol. 21; no. 1; p. e1012844 |
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Language | English |
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Abstract | Japanese encephalitis virus (JEV), a neuroinvasive and neurovirulent orthoflavivirus, can be prevented in humans with the SA
14
-14-2 vaccine, a live-attenuated version derived from the wild-type SA
14
strain. To determine the viral factors responsible for the differences in pathogenicity between SA
14
and SA
14
-14-2, we initially established a reverse genetics system that includes a pair of full-length infectious cDNAs for both strains. Using this cDNA pair, we then systematically exchanged genomic regions between SA
14
and SA
14
-14-2 to generate 20 chimeric viruses and evaluated their replication capability in cell culture and their pathogenic potential in mice. Our findings revealed the following: (
i
) The single envelope (E) protein of SA
14
-14-2, which contains nine mutations (eight in the ectodomain and one in the stem region), is both necessary and sufficient to render SA
14
non-neuroinvasive and non-neurovirulent. (
ii
) Conversely, the E protein of SA
14
alone is necessary for SA
14
-14-2 to become highly neurovirulent, but it is not sufficient to make it highly neuroinvasive. (
iii
) The limited neuroinvasiveness of an SA
14
-14-2 derivative that contains the E gene of SA
14
significantly increases (approaching that of the wild-type strain) when two viral nonstructural proteins are replaced by their counterparts from SA
14
: (
a
) NS1/1’, which has four mutations on the external surface of the core β-ladder domain; and (
b
) NS2A, which has two mutations in the N-terminal region, including two non-transmembrane α-helices. In line with their roles in viral pathogenicity, the E, NS1/1’, and NS2A genes all contribute to the enhanced spread of the virus in cell culture. Collectively, our data reveal for the first time that the E protein of JEV has a dual function: It is the master regulator of viral neurovirulence and also the primary initiator of viral neuroinvasion. After the initial E-mediated neuroinvasion, the NS1/1’ and NS2A proteins act as secondary promoters, further amplifying viral neuroinvasiveness. |
---|---|
AbstractList | Japanese encephalitis virus (JEV), a neuroinvasive and neurovirulent orthoflavivirus, can be prevented in humans with the SA14-14-2 vaccine, a live-attenuated version derived from the wild-type SA14 strain. To determine the viral factors responsible for the differences in pathogenicity between SA14 and SA14-14-2, we initially established a reverse genetics system that includes a pair of full-length infectious cDNAs for both strains. Using this cDNA pair, we then systematically exchanged genomic regions between SA14 and SA14-14-2 to generate 20 chimeric viruses and evaluated their replication capability in cell culture and their pathogenic potential in mice. Our findings revealed the following: (i) The single envelope (E) protein of SA14-14-2, which contains nine mutations (eight in the ectodomain and one in the stem region), is both necessary and sufficient to render SA14 non-neuroinvasive and non-neurovirulent. (ii) Conversely, the E protein of SA14 alone is necessary for SA14-14-2 to become highly neurovirulent, but it is not sufficient to make it highly neuroinvasive. (iii) The limited neuroinvasiveness of an SA14-14-2 derivative that contains the E gene of SA14 significantly increases (approaching that of the wild-type strain) when two viral nonstructural proteins are replaced by their counterparts from SA14: (a) NS1/1', which has four mutations on the external surface of the core β-ladder domain; and (b) NS2A, which has two mutations in the N-terminal region, including two non-transmembrane α-helices. In line with their roles in viral pathogenicity, the E, NS1/1', and NS2A genes all contribute to the enhanced spread of the virus in cell culture. Collectively, our data reveal for the first time that the E protein of JEV has a dual function: It is the master regulator of viral neurovirulence and also the primary initiator of viral neuroinvasion. After the initial E-mediated neuroinvasion, the NS1/1' and NS2A proteins act as secondary promoters, further amplifying viral neuroinvasiveness.Japanese encephalitis virus (JEV), a neuroinvasive and neurovirulent orthoflavivirus, can be prevented in humans with the SA14-14-2 vaccine, a live-attenuated version derived from the wild-type SA14 strain. To determine the viral factors responsible for the differences in pathogenicity between SA14 and SA14-14-2, we initially established a reverse genetics system that includes a pair of full-length infectious cDNAs for both strains. Using this cDNA pair, we then systematically exchanged genomic regions between SA14 and SA14-14-2 to generate 20 chimeric viruses and evaluated their replication capability in cell culture and their pathogenic potential in mice. Our findings revealed the following: (i) The single envelope (E) protein of SA14-14-2, which contains nine mutations (eight in the ectodomain and one in the stem region), is both necessary and sufficient to render SA14 non-neuroinvasive and non-neurovirulent. (ii) Conversely, the E protein of SA14 alone is necessary for SA14-14-2 to become highly neurovirulent, but it is not sufficient to make it highly neuroinvasive. (iii) The limited neuroinvasiveness of an SA14-14-2 derivative that contains the E gene of SA14 significantly increases (approaching that of the wild-type strain) when two viral nonstructural proteins are replaced by their counterparts from SA14: (a) NS1/1', which has four mutations on the external surface of the core β-ladder domain; and (b) NS2A, which has two mutations in the N-terminal region, including two non-transmembrane α-helices. In line with their roles in viral pathogenicity, the E, NS1/1', and NS2A genes all contribute to the enhanced spread of the virus in cell culture. Collectively, our data reveal for the first time that the E protein of JEV has a dual function: It is the master regulator of viral neurovirulence and also the primary initiator of viral neuroinvasion. After the initial E-mediated neuroinvasion, the NS1/1' and NS2A proteins act as secondary promoters, further amplifying viral neuroinvasiveness. Japanese encephalitis virus (JEV), a neuroinvasive and neurovirulent orthoflavivirus, can be prevented in humans with the SA 14 -14-2 vaccine, a live-attenuated version derived from the wild-type SA 14 strain. To determine the viral factors responsible for the differences in pathogenicity between SA 14 and SA 14 -14-2, we initially established a reverse genetics system that includes a pair of full-length infectious cDNAs for both strains. Using this cDNA pair, we then systematically exchanged genomic regions between SA 14 and SA 14 -14-2 to generate 20 chimeric viruses and evaluated their replication capability in cell culture and their pathogenic potential in mice. Our findings revealed the following: ( i ) The single envelope (E) protein of SA 14 -14-2, which contains nine mutations (eight in the ectodomain and one in the stem region), is both necessary and sufficient to render SA 14 non-neuroinvasive and non-neurovirulent. ( ii ) Conversely, the E protein of SA 14 alone is necessary for SA 14 -14-2 to become highly neurovirulent, but it is not sufficient to make it highly neuroinvasive. ( iii ) The limited neuroinvasiveness of an SA 14 -14-2 derivative that contains the E gene of SA 14 significantly increases (approaching that of the wild-type strain) when two viral nonstructural proteins are replaced by their counterparts from SA 14 : ( a ) NS1/1’, which has four mutations on the external surface of the core β-ladder domain; and ( b ) NS2A, which has two mutations in the N-terminal region, including two non-transmembrane α-helices. In line with their roles in viral pathogenicity, the E, NS1/1’, and NS2A genes all contribute to the enhanced spread of the virus in cell culture. Collectively, our data reveal for the first time that the E protein of JEV has a dual function: It is the master regulator of viral neurovirulence and also the primary initiator of viral neuroinvasion. After the initial E-mediated neuroinvasion, the NS1/1’ and NS2A proteins act as secondary promoters, further amplifying viral neuroinvasiveness. Japanese encephalitis virus (JEV), a neuroinvasive and neurovirulent orthoflavivirus, can be prevented in humans with the SA14-14-2 vaccine, a live-attenuated version derived from the wild-type SA14 strain. To determine the viral factors responsible for the differences in pathogenicity between SA14 and SA14-14-2, we initially established a reverse genetics system that includes a pair of full-length infectious cDNAs for both strains. Using this cDNA pair, we then systematically exchanged genomic regions between SA14 and SA14-14-2 to generate 20 chimeric viruses and evaluated their replication capability in cell culture and their pathogenic potential in mice. Our findings revealed the following: (i) The single envelope (E) protein of SA14-14-2, which contains nine mutations (eight in the ectodomain and one in the stem region), is both necessary and sufficient to render SA14 non-neuroinvasive and non-neurovirulent. (ii) Conversely, the E protein of SA14 alone is necessary for SA14-14-2 to become highly neurovirulent, but it is not sufficient to make it highly neuroinvasive. (iii) The limited neuroinvasiveness of an SA14-14-2 derivative that contains the E gene of SA14 significantly increases (approaching that of the wild-type strain) when two viral nonstructural proteins are replaced by their counterparts from SA14: (a) NS1/1', which has four mutations on the external surface of the core β-ladder domain; and (b) NS2A, which has two mutations in the N-terminal region, including two non-transmembrane α-helices. In line with their roles in viral pathogenicity, the E, NS1/1', and NS2A genes all contribute to the enhanced spread of the virus in cell culture. Collectively, our data reveal for the first time that the E protein of JEV has a dual function: It is the master regulator of viral neurovirulence and also the primary initiator of viral neuroinvasion. After the initial E-mediated neuroinvasion, the NS1/1' and NS2A proteins act as secondary promoters, further amplifying viral neuroinvasiveness. |
Author | Song, Byung-Hak Goldhardt, Joseph L. Kim, Jiyoun Yun, Sang-Im Lee, Young-Min |
Author_xml | – sequence: 1 givenname: Byung-Hak surname: Song fullname: Song, Byung-Hak – sequence: 2 givenname: Sang-Im surname: Yun fullname: Yun, Sang-Im – sequence: 3 givenname: Joseph L. surname: Goldhardt fullname: Goldhardt, Joseph L. – sequence: 4 givenname: Jiyoun surname: Kim fullname: Kim, Jiyoun – sequence: 5 givenname: Young-Min orcidid: 0000-0002-3974-3405 surname: Lee fullname: Lee, Young-Min |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/39775684$$D View this record in MEDLINE/PubMed |
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Cites_doi | 10.1128/JVI.00903-12 10.4269/ajtmh.1999.60.338 10.1046/j.1523-1747.2000.00904.x 10.1007/s00705-018-3765-2 10.1016/j.stem.2017.07.014 10.1111/j.1863-2378.2008.01208.x 10.1073/pnas.1017338108 10.1128/JVI.00143-15 10.1016/j.str.2004.06.019 10.2217/fmb-2016-0002 10.1111/zph.12501 10.1128/mBio.02375-19 10.1002/jmv.21688 10.1128/JVI.00002-08 10.1128/JVI.01868-17 10.1016/0042-6822(89)90544-8 10.1016/j.vaccine.2010.02.105 10.1016/j.virol.2012.05.013 10.1016/j.virol.2007.04.016 10.1128/JVI.03011-14 10.1126/science.1153264 10.1099/vir.0.18883-0 10.1038/nrmicro.2017.170 10.3390/v9010020 10.1128/CMR.00118-13 10.1128/JVI.00986-10 10.1016/j.vaccine.2018.06.040 10.3389/fmicb.2019.00525 10.1016/j.vaccine.2014.03.074 10.3390/pathogens12050715 10.1099/jgv.0.000672 10.1099/vir.0.043844-0 10.1099/0022-1317-75-6-1505 10.4161/hv.26902 10.1097/NEN.0000000000000166 10.2807/ese.17.28.20221-en 10.15252/embj.201695290 10.1080/22221751.2019.1598291 10.1016/j.cell.2018.11.028 10.1128/JVI.02882-14 10.1016/S0065-3527(03)60008-4 10.1186/1743-422X-10-258 10.1016/j.cellimm.2013.09.005 10.1099/0022-1317-76-2-409 10.1128/JVI.00219-15 10.1128/JVI.73.6.4611-4621.1999 10.1186/1743-422X-6-14 10.1146/annurev.mi.40.100186.002143 10.1038/s41467-020-14647-9 10.1126/science.1153263 10.1002/glia.22857 10.1159/000335182 10.1038/s41598-019-56291-4 10.4103/0972-9062.117470 10.1084/jem.20092545 10.1016/0042-6822(90)90519-W 10.3390/pathogens7030068 10.1093/jtm/taaa172 10.1371/journal.pone.0057514 10.1128/mBio.01956-15 10.1099/vir.0.80638-0 10.1038/srep17548 10.3390/v12050552 10.1080/21505594.2017.1356540 10.3201/eid1501.080311 10.1056/NEJMc1701600 10.1128/JVI.77.5.3091-3098.2003 10.3390/v13061060 10.1002/glia.22282 10.1038/nsmb.3268 10.4269/ajtmh.14-0427 10.1016/j.vaccine.2020.01.005 10.1099/vir.0.83620-0 10.3390/v6010069 10.4269/ajtmh.2007.77.1139 10.1128/JVI.03351-14 10.1371/journal.ppat.1008260 10.3390/v11070623 10.1128/JVI.00596-21 10.1038/s41564-020-0714-0 10.1128/JVI.02424-12 10.1128/JVI.01399-12 10.2807/ese.17.32.20241-en 10.1016/j.vetmic.2017.01.014 10.1016/j.jneuroim.2008.01.009 10.1371/journal.ppat.1004290 10.1371/journal.ppat.1007736 10.1016/j.tibs.2020.12.007 10.4269/ajtmh.1985.34.1203 10.1080/21505594.2021.1899674 10.1021/acsinfecdis.3c00566 10.1016/j.pneurobio.2010.01.008 10.1002/glia.20474 10.1002/ana.410180510 10.1128/JVI.73.7.6104-6110.1999 10.1099/vir.0.013565-0 10.1186/s12985-024-02398-8 10.1128/JVI.02738-13 10.1099/jgv.0.000574 10.1038/s41467-022-34415-1 10.1128/JVI.00157-12 10.1016/B978-0-12-809633-8.21503-3 10.1111/j.1476-5381.2010.00982.x 10.1128/JVI.78.22.12107-12119.2004 10.1016/j.chom.2009.03.007 10.3389/fimmu.2021.638694 10.1099/0022-1317-49-7-607 10.1016/j.micpath.2017.08.046 10.1016/j.chom.2019.09.015 10.1038/s41594-017-0010-8 10.1007/s00018-021-03834-6 10.1007/BF01319002 10.3390/v14102213 10.1021/acs.chemrev.7b00719 10.1371/journal.pone.0124318 10.1038/s41467-019-08641-z 10.1038/nrneurol.2018.30 10.1111/j.1462-5822.2007.00955.x 10.1128/JVI.77.11.6450-6465.2003 10.1146/annurev-virology-092917-043439 10.1086/423328 10.1146/annurev.ento.54.110807.090510 10.1371/journal.pntd.0010361 10.1099/jgv.0.000015 10.1371/journal.ppat.1002655 10.1016/0264-410X(88)90103-X 10.1111/j.1348-0421.1990.tb01028.x 10.1371/journal.pntd.0002980 10.1038/s41541-021-00371-y 10.1371/journal.ppat.1005277 10.1038/nsmb.3213 10.3389/fimmu.2023.1205002 10.1111/j.1471-4159.2010.06951.x 10.1093/jtm/tay009 10.3390/v13060956 10.1016/j.virusres.2016.10.005 10.1016/j.coviro.2012.12.001 10.1016/j.neuint.2009.07.006 10.1007/BF00571925 10.1099/vir.0.19426-0 10.1016/j.virol.2015.05.017 10.1038/s41467-017-00024-6 10.1080/13550280802339643 10.1016/j.virol.2007.12.018 10.1186/1742-2094-9-12 10.1080/21645515.2017.1285472 10.1371/journal.pntd.0004074 10.1093/infdis/171.5.1144 10.1038/nm1144 10.1371/journal.ppat.1003549 10.1016/j.neuron.2019.07.015 10.1016/j.vaccine.2010.09.108 10.1016/j.trstmh.2006.02.008 10.1128/JVI.76.10.4773-4784.2002 10.1128/JVI.80.2.723-736.2006 10.1128/spectrum.01990-22 10.7554/eLife.51027 10.1016/j.mcn.2018.04.002 10.1128/jvi.71.11.8475-8481.1997 10.1073/pnas.1322036111 10.1128/JVI.00912-16 10.1073/pnas.0605668103 10.1093/emboj/cdg270 10.1126/science.1247749 10.1016/j.virol.2022.02.001 10.1016/j.celrep.2017.11.094 10.1038/nrmicro1067 10.1128/JVI.01979-09 10.1006/viro.1996.0457 10.1016/j.virusres.2023.199222 10.1111/j.1471-4159.2008.05511.x 10.1056/NEJMra030476 10.1128/JVI.00108-18 10.3390/v9100291 10.4049/jimmunol.0801952 10.1002/eji.201343701 10.1016/j.jcv.2010.06.009 |
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References | JC Pearce (ppat.1012844.ref008) 2018; 25 KM Chung (ppat.1012844.ref170) 2006; 103 TE Erlanger (ppat.1012844.ref016) 2009; 15 H Hasegawa (ppat.1012844.ref068) 1990; 34 MD Cain (ppat.1012844.ref077) 2019; 103 RH Wu (ppat.1012844.ref181) 2017; 91 Y Li (ppat.1012844.ref064) 2011; 29 TC Pierson (ppat.1012844.ref040) 2013; 3 EM Silva (ppat.1012844.ref173) 2013; 8 X Xie (ppat.1012844.ref176) 2019; 26 WH Tung (ppat.1012844.ref104) 2010; 161 M Caldwell (ppat.1012844.ref006) 2022; 9 AF van den Hurk (ppat.1012844.ref017) 2009; 54 G Shrivastava (ppat.1012844.ref183) 2017; 8 A Mathur (ppat.1012844.ref099) 1992; 73 G Winkler (ppat.1012844.ref159) 1989; 171 TR Barnard (ppat.1012844.ref053) 2021; 46 GN Sapkal (ppat.1012844.ref075) 2007; 77 CY Chang (ppat.1012844.ref098) 2015; 63 GD Gromowski (ppat.1012844.ref147) 2015; 89 H Song (ppat.1012844.ref131) 2016; 23 JS Mackenzie (ppat.1012844.ref030) 2004; 10 T Solomon (ppat.1012844.ref019) 2003; 77 EH Davis (ppat.1012844.ref110) 2021; 6 ERA Oliveira (ppat.1012844.ref034) 2017; 227 LJ Johnston (ppat.1012844.ref070) 2000; 114 Y Ci (ppat.1012844.ref048) 2021; 78 NR Hegde (ppat.1012844.ref028) 2017; 13 Y Zhou (ppat.1012844.ref154) 2018; 163 AE Firth (ppat.1012844.ref042) 2009; 6 A Patabendige (ppat.1012844.ref096) 2018; 89 JN Conde (ppat.1012844.ref174) 2016; 90 SJ Dando (ppat.1012844.ref078) 2014; 27 X Xu (ppat.1012844.ref129) 2016; 35 I Gutsche (ppat.1012844.ref130) 2011; 108 M Kalia (ppat.1012844.ref143) 2013; 87 T. Solomon (ppat.1012844.ref004) 2004; 351 S Preziuso (ppat.1012844.ref022) 2018; 65 E Simon-Loriere (ppat.1012844.ref024) 2017; 376 AG Aleyas (ppat.1012844.ref063) 2009; 183 CJ Chen (ppat.1012844.ref093) 2012; 60 WC Brown (ppat.1012844.ref128) 2016; 23 KJ Yoon (ppat.1012844.ref185) 2017; 21 BD Lindenbach (ppat.1012844.ref165) 1999; 73 P Ravanini (ppat.1012844.ref023) 2012; 17 L Turtle (ppat.1012844.ref026) 2018; 14 G Avila-Perez (ppat.1012844.ref184) 2019; 9 S Chauhan (ppat.1012844.ref067) 2021; 12 A Platonov (ppat.1012844.ref021) 2012; 17 X Zhang (ppat.1012844.ref177) 2019; 10 NJ Barrows (ppat.1012844.ref060) 2018; 118 T Poonsiri (ppat.1012844.ref033) 2019; 11 Q Ye (ppat.1012844.ref044) 2012; 93 SI Yun (ppat.1012844.ref116) 2016; 97 T Hase (ppat.1012844.ref085) 1990; 71 M Perera-Lecoin (ppat.1012844.ref038) 2014; 6 J Yang (ppat.1012844.ref158) 2017; 9 IM Yu (ppat.1012844.ref058) 2008; 319 F. Frischknecht (ppat.1012844.ref061) 2007; 9 B Nath (ppat.1012844.ref118) 2017; 111 A Plaszczyca (ppat.1012844.ref166) 2019; 15 N Nagata (ppat.1012844.ref074) 2015; 74 M Nawa (ppat.1012844.ref142) 2003; 84 TJ Chambers (ppat.1012844.ref148) 2007; 366 S Das (ppat.1012844.ref088) 2008; 106 S Yang (ppat.1012844.ref139) 2013; 10 JS Lord (ppat.1012844.ref010) 2015; 9 P Simmonds (ppat.1012844.ref001) 2017; 98 LK Gillespie (ppat.1012844.ref045) 2010; 84 E Morita (ppat.1012844.ref051) 2021; 13 JH Kim (ppat.1012844.ref072) 2015; 5 KS Myint (ppat.1012844.ref091) 2014; 8 DR Perera (ppat.1012844.ref125) 2024; 10 CM Yang (ppat.1012844.ref105) 2012; 9 P Scaturro (ppat.1012844.ref164) 2015; 11 LK Chen (ppat.1012844.ref149) 1996; 223 TY Tan (ppat.1012844.ref054) 2020; 11 S Das (ppat.1012844.ref095) 2008; 195 JC Frank (ppat.1012844.ref014) 2023; 12 JS Mackenzie (ppat.1012844.ref018) 2009; 56 T Poonsiri (ppat.1012844.ref132) 2018; 92 S Vossmann (ppat.1012844.ref179) 2015; 89 KS Myint (ppat.1012844.ref086) 1999; 60 KD Yang (ppat.1012844.ref073) 2004; 85 A Singh (ppat.1012844.ref109) 2000; 49 MA Edeling (ppat.1012844.ref127) 2014; 111 TH Liu (ppat.1012844.ref079) 2008; 14 CC Liu (ppat.1012844.ref138) 2017; 91 E Lecomte (ppat.1012844.ref007) 2020; 27 AP Dash (ppat.1012844.ref031) 2013; 50 T Yamashita (ppat.1012844.ref050) 2008; 373 CK Chuang (ppat.1012844.ref140) 2015; 96 L. Rosen (ppat.1012844.ref009) 1986; 40 SI Yun (ppat.1012844.ref121) 2014; 10 S Das (ppat.1012844.ref141) 2010; 115 H Sumiyoshi (ppat.1012844.ref153) 1995; 171 B Shue (ppat.1012844.ref167) 2021; 95 UK Misra (ppat.1012844.ref012) 2010; 91 KH Eckels (ppat.1012844.ref137) 1988; 6 SI Yun (ppat.1012844.ref032) 2021 Q Zeng (ppat.1012844.ref124) 2023; 336 N Gupta (ppat.1012844.ref101) 2010; 49 JT Hsieh (ppat.1012844.ref106) 2019; 10 S Youn (ppat.1012844.ref163) 2012; 86 A Ghoshal (ppat.1012844.ref092) 2007; 55 H Yang (ppat.1012844.ref157) 2020; 38 JY Leung (ppat.1012844.ref178) 2008; 82 CJ Neufeldt (ppat.1012844.ref047) 2018; 16 CJ Chen (ppat.1012844.ref108) 2004; 78 PM Winter (ppat.1012844.ref102) 2004; 190 S Chen (ppat.1012844.ref133) 2017; 9 X Xie (ppat.1012844.ref134) 2013; 87 Q Xu (ppat.1012844.ref144) 2016; 11 H Sooryanarain (ppat.1012844.ref066) 2012; 432 MN Anwar (ppat.1012844.ref039) 2022; 568 Q Xia (ppat.1012844.ref156) 2022; 10 JT Hsieh (ppat.1012844.ref080) 2020; 16 TJ Chambers (ppat.1012844.ref090) 2003; 60 P Avirutnan (ppat.1012844.ref171) 2010; 207 B Khare (ppat.1012844.ref002) 2022; 14 T Hase (ppat.1012844.ref136) 1993; 130 Y Zhang (ppat.1012844.ref056) 2003; 22 K Stadler (ppat.1012844.ref057) 1997; 71 TM Quan (ppat.1012844.ref029) 2020; 9 JK Kim (ppat.1012844.ref041) 2015; 10 G Lu (ppat.1012844.ref049) 2013; 9 B Shu (ppat.1012844.ref161) 2022; 13 SI Yun (ppat.1012844.ref027) 2014; 10 RT Johnson (ppat.1012844.ref087) 1985; 18 X Wang (ppat.1012844.ref035) 2017; 8 DS Burke (ppat.1012844.ref076) 1985; 34 Z Zhao (ppat.1012844.ref152) 2005; 86 CJ Chen (ppat.1012844.ref094) 2010; 91 PS Shah (ppat.1012844.ref169) 2018; 175 CJ Chen (ppat.1012844.ref097) 2014; 88 Y Zhang (ppat.1012844.ref059) 2004; 12 JS Mackenzie (ppat.1012844.ref003) 2002; 267 S Welsch (ppat.1012844.ref046) 2009; 5 S Mukhopadhyay (ppat.1012844.ref036) 2005; 3 H Ni (ppat.1012844.ref114) 1995; 76 DL Akey (ppat.1012844.ref126) 2014; 343 BM Kummerer (ppat.1012844.ref175) 2002; 76 A Mathur (ppat.1012844.ref071) 1988; 69 OA Maximova (ppat.1012844.ref082) 2018; 5 MN Anwar (ppat.1012844.ref150) 2020; 12 SI Yun (ppat.1012844.ref186) 2003; 77 L Li (ppat.1012844.ref055) 2008; 319 K Kundu (ppat.1012844.ref062) 2013; 285 M Cervantes-Salazar (ppat.1012844.ref172) 2015; 484 YJ Choi (ppat.1012844.ref187) 2006; 80 Y Cheng (ppat.1012844.ref015) 2022; 16 MK Mishra (ppat.1012844.ref107) 2009; 55 S Noisakran (ppat.1012844.ref160) 2008; 89 SI Yun (ppat.1012844.ref037) 2018; 7 K van den Elsen (ppat.1012844.ref052) 2021; 13 EB Melian (ppat.1012844.ref043) 2010; 84 S Zhang (ppat.1012844.ref123) 2023; 14 KL Mansfield (ppat.1012844.ref011) 2017; 201 X Zheng (ppat.1012844.ref151) 2018; 92 ppat.1012844.ref025 MD Fernandez-Garcia (ppat.1012844.ref146) 2016; 7 V Shukla (ppat.1012844.ref103) 2012; 19 S Aihara (ppat.1012844.ref112) 1991; 5 ML Hafirassou (ppat.1012844.ref168) 2017; 21 X Liu (ppat.1012844.ref117) 2018; 36 X Xie (ppat.1012844.ref182) 2015; 89 T Solomon (ppat.1012844.ref013) 2002; 267 H Wang (ppat.1012844.ref020) 2015; 11 RH Wu (ppat.1012844.ref180) 2015; 89 AC German (ppat.1012844.ref084) 2006; 100 Y Yu (ppat.1012844.ref111) 2010; 28 M Flamand (ppat.1012844.ref162) 1999; 73 ST Chen (ppat.1012844.ref069) 2012; 8 D Yang (ppat.1012844.ref119) 2014; 32 GD Gromowski (ppat.1012844.ref120) 2015; 92 YZ Zhu (ppat.1012844.ref145) 2012; 86 U Ashraf (ppat.1012844.ref083) 2021; 12 S Nitayaphan (ppat.1012844.ref115) 1990; 177 F Li (ppat.1012844.ref089) 2015; 89 H Ni (ppat.1012844.ref113) 1994; 75 SS Hasan (ppat.1012844.ref122) 2018; 25 X Zhang (ppat.1012844.ref135) 2019; 8 SM Biswas (ppat.1012844.ref100) 2010; 82 TC Pierson (ppat.1012844.ref005) 2020; 5 N Gupta (ppat.1012844.ref065) 2014; 44 YM Mustafa (ppat.1012844.ref081) 2019; 10 R Huang (ppat.1012844.ref155) 2024; 21 |
References_xml | – volume: 86 start-page: 13407 issue: 24 year: 2012 ident: ppat.1012844.ref145 article-title: Japanese encephalitis virus enters rat neuroblastoma cells via a pH-dependent, dynamin and caveola-mediated endocytosis pathway publication-title: J Virol doi: 10.1128/JVI.00903-12 – volume: 60 start-page: 338 issue: 3 year: 1999 ident: ppat.1012844.ref086 article-title: Production of lethal infection that resembles fatal human disease by intranasal inoculation of macaques with Japanese encephalitis virus publication-title: Am J Trop Med Hyg doi: 10.4269/ajtmh.1999.60.338 – volume: 114 start-page: 560 issue: 3 year: 2000 ident: ppat.1012844.ref070 article-title: Langerhans cells migrate to local lymph nodes following cutaneous infection with an arbovirus publication-title: J Invest Dermatol doi: 10.1046/j.1523-1747.2000.00904.x – volume: 163 start-page: 1351 issue: 5 year: 2018 ident: ppat.1012844.ref154 article-title: Mutation of I176R in the E coding region weakens Japanese encephalitis virus neurovirulence, but not its growth rate in BHK-21 cells publication-title: Arch Virol doi: 10.1007/s00705-018-3765-2 – volume: 21 start-page: 349 issue: 3 year: 2017 ident: ppat.1012844.ref185 article-title: Zika-virus-encoded NS2A disrupts mammalian cortical neurogenesis by degrading adherens junction proteins publication-title: Cell Stem Cell doi: 10.1016/j.stem.2017.07.014 – volume: 56 start-page: 338 issue: 6–7 year: 2009 ident: ppat.1012844.ref018 article-title: The zoonotic flaviviruses of southern, south-eastern and eastern Asia, and Australasia: the potential for emergent viruses publication-title: Zoonoses Public Health doi: 10.1111/j.1863-2378.2008.01208.x – volume: 108 start-page: 8003 issue: 19 year: 2011 ident: ppat.1012844.ref130 article-title: Secreted dengue virus nonstructural protein NS1 is an atypical barrel-shaped high-density lipoprotein publication-title: Proc Natl Acad Sci U S A doi: 10.1073/pnas.1017338108 – volume: 89 start-page: 5602 issue: 10 year: 2015 ident: ppat.1012844.ref089 article-title: Viral infection of the central nervous system and neuroinflammation precede blood-brain barrier disruption during Japanese encephalitis virus infection publication-title: J Virol doi: 10.1128/JVI.00143-15 – volume: 12 start-page: 1607 issue: 9 year: 2004 ident: ppat.1012844.ref059 article-title: Conformational changes of the flavivirus E glycoprotein publication-title: Structure doi: 10.1016/j.str.2004.06.019 – volume: 11 start-page: 1227 year: 2016 ident: ppat.1012844.ref144 article-title: Caveolin-1-mediated Japanese encephalitis virus entry requires a two-step regulation of actin reorganization publication-title: Future Microbiol doi: 10.2217/fmb-2016-0002 – volume: 65 start-page: 798 issue: 7 year: 2018 ident: ppat.1012844.ref022 article-title: Detection of Japanese encephalitis virus in bone marrow of healthy young wild birds collected in 1997–2000 in Central Italy publication-title: Zoonoses Public Health doi: 10.1111/zph.12501 – volume: 10 start-page: e02375 issue: 5 year: 2019 ident: ppat.1012844.ref177 article-title: Zika virus NS2A-mediated virion assembly publication-title: mBio doi: 10.1128/mBio.02375-19 – volume: 82 start-page: 304 issue: 2 year: 2010 ident: ppat.1012844.ref100 article-title: Immunomodulatory cytokines determine the outcome of Japanese encephalitis virus infection in mice publication-title: J Med Virol doi: 10.1002/jmv.21688 – volume: 82 start-page: 4731 issue: 10 year: 2008 ident: ppat.1012844.ref178 article-title: Role of nonstructural protein NS2A in flavivirus assembly publication-title: J Virol doi: 10.1128/JVI.00002-08 – volume: 92 start-page: e01868 issue: 7 year: 2018 ident: ppat.1012844.ref132 article-title: Structural study of the C-terminal domain of nonstructural protein 1 from Japanese encephalitis virus publication-title: J Virol doi: 10.1128/JVI.01868-17 – volume: 171 start-page: 302 issue: 1 year: 1989 ident: ppat.1012844.ref159 article-title: Newly synthesized dengue-2 virus nonstructural protein NS1 is a soluble protein but becomes partially hydrophobic and membrane-associated after dimerization publication-title: Virology doi: 10.1016/0042-6822(89)90544-8 – volume: 28 start-page: 3635 issue: 21 year: 2010 ident: ppat.1012844.ref111 article-title: Phenotypic and genotypic characteristics of Japanese encephalitis attenuated live vaccine virus SA14-14-2 and their stabilities publication-title: Vaccine doi: 10.1016/j.vaccine.2010.02.105 – volume: 71 start-page: 857 issue: 6 year: 1990 ident: ppat.1012844.ref085 article-title: Comparative study of mouse brains infected with Japanese encephalitis virus by intracerebral or intraperitoneal inoculation publication-title: Int J Exp Pathol – volume: 432 start-page: 250 issue: 2 year: 2012 ident: ppat.1012844.ref066 article-title: Activated CD56+ lymphocytes (NK+NKT) mediate immunomodulatory and antiviral effects during Japanese encephalitis virus infection of dendritic cells in vitro publication-title: Virology doi: 10.1016/j.virol.2012.05.013 – volume: 366 start-page: 51 issue: 1 year: 2007 ident: ppat.1012844.ref148 article-title: JE Nakayama/JE SA14-14-2 virus structural region intertypic viruses: biological properties in the mouse model of neuroinvasive disease publication-title: Virology doi: 10.1016/j.virol.2007.04.016 – volume: 89 start-page: 4281 issue: 8 year: 2015 ident: ppat.1012844.ref180 article-title: Scanning mutagenesis studies reveal a potential intramolecular interaction within the C-terminal half of dengue virus NS2A involved in viral RNA replication and virus assembly and secretion publication-title: J Virol doi: 10.1128/JVI.03011-14 – volume: 319 start-page: 1834 issue: 5871 year: 2008 ident: ppat.1012844.ref058 article-title: Structure of the immature dengue virus at low pH primes proteolytic maturation publication-title: Science doi: 10.1126/science.1153264 – volume: 84 start-page: 1737 issue: 7 year: 2003 ident: ppat.1012844.ref142 article-title: Interference in Japanese encephalitis virus infection of Vero cells by a cationic amphiphilic drug, chlorpromazine publication-title: J Gen Virol doi: 10.1099/vir.0.18883-0 – volume: 16 start-page: 125 issue: 3 year: 2018 ident: ppat.1012844.ref047 article-title: Rewiring cellular networks by members of the Flaviviridae family publication-title: Nat Rev Microbiol doi: 10.1038/nrmicro.2017.170 – volume: 9 start-page: 20 issue: 1 year: 2017 ident: ppat.1012844.ref158 article-title: Envelope protein mutations L107F and E138K are important for neurovirulence attenuation for Japanese encephalitis virus SA14-14-2 strain publication-title: Viruses doi: 10.3390/v9010020 – volume: 27 start-page: 691 issue: 4 year: 2014 ident: ppat.1012844.ref078 article-title: Pathogens penetrating the central nervous system: infection pathways and the cellular and molecular mechanisms of invasion publication-title: Clin Microbiol Rev doi: 10.1128/CMR.00118-13 – volume: 84 start-page: 10438 issue: 20 year: 2010 ident: ppat.1012844.ref045 article-title: The endoplasmic reticulum provides the membrane platform for biogenesis of the flavivirus replication complex publication-title: J Virol doi: 10.1128/JVI.00986-10 – volume: 36 start-page: 4650 issue: 31 year: 2018 ident: ppat.1012844.ref117 article-title: Genetic and neuroattenuation phenotypic characteristics and their stabilities of SA14-14-2 vaccine seed virus publication-title: Vaccine doi: 10.1016/j.vaccine.2018.06.040 – volume: 10 start-page: 525 year: 2019 ident: ppat.1012844.ref081 article-title: Pathways exploited by flaviviruses to counteract the blood-brain barrier and invade the central nervous system publication-title: Front Microbiol doi: 10.3389/fmicb.2019.00525 – volume: 32 start-page: 2675 issue: 23 year: 2014 ident: ppat.1012844.ref119 article-title: Characterization of live-attenuated Japanese encephalitis vaccine virus SA14-14-2 publication-title: Vaccine doi: 10.1016/j.vaccine.2014.03.074 – volume: 12 start-page: 715 issue: 5 year: 2023 ident: ppat.1012844.ref014 article-title: Mice as an animal model for Japanese encephalitis virus research: mouse susceptibility, infection route, and viral pathogenesis publication-title: Pathogens doi: 10.3390/pathogens12050715 – volume: 98 start-page: 2 issue: 1 year: 2017 ident: ppat.1012844.ref001 article-title: ICTV virus taxonomy profile: Flaviviridae publication-title: J Gen Virol doi: 10.1099/jgv.0.000672 – volume: 93 start-page: 1959 issue: 9 year: 2012 ident: ppat.1012844.ref044 article-title: A single nucleotide mutation in NS2A of Japanese encephalitis-live vaccine virus (SA14-14-2) ablates NS1’ formation and contributes to attenuation publication-title: J Gen Virol doi: 10.1099/vir.0.043844-0 – volume: 75 start-page: 1505 issue: 6 year: 1994 ident: ppat.1012844.ref113 article-title: Comparison of nucleotide and deduced amino acid sequence of the 5’ non-coding region and structural protein genes of the wild-type Japanese encephalitis virus strain SA14 and its attenuated vaccine derivatives publication-title: J Gen Virol doi: 10.1099/0022-1317-75-6-1505 – volume: 10 start-page: 263 issue: 2 year: 2014 ident: ppat.1012844.ref027 article-title: Japanese encephalitis: the virus and vaccines publication-title: Hum Vaccin Immunother doi: 10.4161/hv.26902 – volume: 74 start-page: 250 issue: 3 year: 2015 ident: ppat.1012844.ref074 article-title: The pathogenesis of 3 neurotropic flaviviruses in a mouse model depends on the route of neuroinvasion after viremia publication-title: J Neuropathol Exp Neurol doi: 10.1097/NEN.0000000000000166 – volume: 17 start-page: 20221 issue: 28 year: 2012 ident: ppat.1012844.ref023 article-title: Japanese encephalitis virus RNA detected in Culex pipiens mosquitoes in Italy publication-title: Euro Surveill doi: 10.2807/ese.17.28.20221-en – volume: 35 start-page: 2170 issue: 20 year: 2016 ident: ppat.1012844.ref129 article-title: Contribution of intertwined loop to membrane association revealed by Zika virus full-length NS1 structure publication-title: EMBO J doi: 10.15252/embj.201695290 – volume: 8 start-page: 585 issue: 1 year: 2019 ident: ppat.1012844.ref135 article-title: Genetic and biochemical characterizations of Zika virus NS2A protein publication-title: Emerg Microbes Infect doi: 10.1080/22221751.2019.1598291 – volume: 175 start-page: 1931 issue: 7 year: 2018 ident: ppat.1012844.ref169 article-title: Comparative flavivirus-host protein interaction mapping reveals mechanisms of dengue and Zika virus pathogenesis publication-title: Cell doi: 10.1016/j.cell.2018.11.028 – volume: 89 start-page: 1298 issue: 2 year: 2015 ident: ppat.1012844.ref182 article-title: Two distinct sets of NS2A molecules are responsible for dengue virus RNA synthesis and virion assembly publication-title: J Virol doi: 10.1128/JVI.02882-14 – volume: 60 start-page: 273 year: 2003 ident: ppat.1012844.ref090 article-title: Pathogenesis of flavivirus encephalitis publication-title: Adv Virus Res doi: 10.1016/S0065-3527(03)60008-4 – volume: 10 start-page: 258 year: 2013 ident: ppat.1012844.ref139 article-title: Japanese encephalitis virus infects porcine kidney epithelial PK15 cells via clathrin- and cholesterol-dependent endocytosis publication-title: Virol J doi: 10.1186/1743-422X-10-258 – volume: 285 start-page: 100 issue: 1–2 year: 2013 ident: ppat.1012844.ref062 article-title: Japanese encephalitis virus infection modulates the expression of suppressors of cytokine signaling (SOCS) in macrophages: implications for the hosts’ innate immune response publication-title: Cell Immunol doi: 10.1016/j.cellimm.2013.09.005 – volume: 76 start-page: 409 issue: 2 year: 1995 ident: ppat.1012844.ref114 article-title: Molecular basis of attenuation of neurovirulence of wild-type Japanese encephalitis virus strain SA14 publication-title: J Gen Virol doi: 10.1099/0022-1317-76-2-409 – volume: 89 start-page: 6328 issue: 12 year: 2015 ident: ppat.1012844.ref147 article-title: Genetic determinants of Japanese encephalitis virus vaccine strain SA14-14-2 that govern attenuation of virulence in mice publication-title: J Virol doi: 10.1128/JVI.00219-15 – volume: 73 start-page: 4611 issue: 6 year: 1999 ident: ppat.1012844.ref165 article-title: Genetic interaction of flavivirus nonstructural proteins NS1 and NS4A as a determinant of replicase function publication-title: J Virol doi: 10.1128/JVI.73.6.4611-4621.1999 – volume: 6 start-page: 14 year: 2009 ident: ppat.1012844.ref042 article-title: A conserved predicted pseudoknot in the NS2A-encoding sequence of West Nile and Japanese encephalitis flaviviruses suggests NS1’ may derive from ribosomal frameshifting publication-title: Virol J doi: 10.1186/1743-422X-6-14 – volume: 40 start-page: 395 year: 1986 ident: ppat.1012844.ref009 article-title: The natural history of Japanese encephalitis virus publication-title: Annu Rev Microbiol doi: 10.1146/annurev.mi.40.100186.002143 – volume: 11 start-page: 895 issue: 1 year: 2020 ident: ppat.1012844.ref054 article-title: Capsid protein structure in Zika virus reveals the flavivirus assembly process publication-title: Nat Commun doi: 10.1038/s41467-020-14647-9 – volume: 267 start-page: 171 year: 2002 ident: ppat.1012844.ref013 article-title: Pathogenesis and clinical features of Japanese encephalitis and West Nile virus infections publication-title: Curr Top Microbiol Immunol – volume: 319 start-page: 1830 issue: 5871 year: 2008 ident: ppat.1012844.ref055 article-title: The flavivirus precursor membrane-envelope protein complex: structure and maturation publication-title: Science doi: 10.1126/science.1153263 – volume: 63 start-page: 1915 issue: 11 year: 2015 ident: ppat.1012844.ref098 article-title: Disruption of in vitro endothelial barrier integrity by Japanese encephalitis virus-infected astrocytes publication-title: Glia doi: 10.1002/glia.22857 – volume: 19 start-page: 241 issue: 4 year: 2012 ident: ppat.1012844.ref103 article-title: Upregulated expression of matrix metalloproteinases and tissue inhibitors of matrix metalloproteinases in BALB/c mouse brain challenged with Japanese encephalitis virus publication-title: Neuroimmunomodulation doi: 10.1159/000335182 – volume: 9 start-page: 19968 issue: 1 year: 2019 ident: ppat.1012844.ref184 article-title: A natural polymorphism in Zika virus NS2A protein responsible of virulence in mice publication-title: Sci Rep doi: 10.1038/s41598-019-56291-4 – volume: 50 start-page: 77 issue: 2 year: 2013 ident: ppat.1012844.ref031 article-title: Emerging and re-emerging arboviral diseases in Southeast Asia publication-title: J Vector Borne Dis doi: 10.4103/0972-9062.117470 – volume: 207 start-page: 793 issue: 4 year: 2010 ident: ppat.1012844.ref171 article-title: Antagonism of the complement component C4 by flavivirus nonstructural protein NS1 publication-title: J Exp Med doi: 10.1084/jem.20092545 – volume: 177 start-page: 541 issue: 2 year: 1990 ident: ppat.1012844.ref115 article-title: Nucleotide sequence of the virulent SA14 strain of Japanese encephalitis virus and its attenuated vaccine derivative, SA14-14-2 publication-title: Virology doi: 10.1016/0042-6822(90)90519-W – volume: 7 start-page: 68 issue: 3 year: 2018 ident: ppat.1012844.ref037 article-title: Early events in Japanese encephalitis virus infection: viral entry publication-title: Pathogens doi: 10.3390/pathogens7030068 – volume: 27 start-page: taaa172 issue: 7 year: 2020 ident: ppat.1012844.ref007 article-title: A clinician’s perspective on yellow fever vaccine-associated neurotropic disease publication-title: J Travel Med doi: 10.1093/jtm/taaa172 – volume: 8 start-page: e57514 issue: 3 year: 2013 ident: ppat.1012844.ref173 article-title: Mapping the interactions of dengue virus NS1 protein with human liver proteins using a yeast two-hybrid system: identification of C1q as an interacting partner publication-title: PLoS One doi: 10.1371/journal.pone.0057514 – volume: 7 start-page: e01956 issue: 1 year: 2016 ident: ppat.1012844.ref146 article-title: Vaccine and wild-type strains of yellow fever virus engage distinct entry mechanisms and differentially stimulate antiviral immune responses publication-title: mBio doi: 10.1128/mBio.01956-15 – volume: 86 start-page: 2209 issue: 8 year: 2005 ident: ppat.1012844.ref152 article-title: Characterization of the E-138 (Glu/Lys) mutation in Japanese encephalitis virus by using a stable, full-length, infectious cDNA clone publication-title: J Gen Virol doi: 10.1099/vir.0.80638-0 – volume: 5 start-page: 17548 year: 2015 ident: ppat.1012844.ref072 article-title: CD11chi dendritic cells regulate Ly-6Chi monocyte differentiation to preserve immune-privileged CNS in lethal neuroinflammation publication-title: Sci Rep doi: 10.1038/srep17548 – volume: 12 start-page: 552 issue: 5 year: 2020 ident: ppat.1012844.ref150 article-title: Phenotypic and genotypic comparison of a live-attenuated genotype I Japanese encephalitis virus SD12-F120 strain with its virulent parental SD12 strain publication-title: Viruses doi: 10.3390/v12050552 – volume: 8 start-page: 1450 issue: 7 year: 2017 ident: ppat.1012844.ref183 article-title: NS2A comprises a putative viroporin of dengue virus 2 publication-title: Virulence doi: 10.1080/21505594.2017.1356540 – volume: 15 start-page: 1 issue: 1 year: 2009 ident: ppat.1012844.ref016 article-title: Past, present, and future of Japanese encephalitis publication-title: Emerg Infect Dis doi: 10.3201/eid1501.080311 – volume: 376 start-page: 1483 issue: 15 year: 2017 ident: ppat.1012844.ref024 article-title: Autochthonous Japanese encephalitis with yellow fever coinfection in Africa publication-title: N Engl J Med doi: 10.1056/NEJMc1701600 – volume: 77 start-page: 3091 issue: 5 year: 2003 ident: ppat.1012844.ref019 article-title: Origin and evolution of Japanese encephalitis virus in southeast Asia publication-title: J Virol doi: 10.1128/JVI.77.5.3091-3098.2003 – volume: 13 start-page: 1060 issue: 6 year: 2021 ident: ppat.1012844.ref051 article-title: Membrane-associated flavivirus replication complex-its organization and regulation publication-title: Viruses doi: 10.3390/v13061060 – volume: 60 start-page: 487 issue: 3 year: 2012 ident: ppat.1012844.ref093 article-title: Glutamate released by Japanese encephalitis virus-infected microglia involves TNF-alpha signaling and contributes to neuronal death publication-title: Glia doi: 10.1002/glia.22282 – volume: 23 start-page: 865 issue: 9 year: 2016 ident: ppat.1012844.ref128 article-title: Extended surface for membrane association in Zika virus NS1 structure publication-title: Nat Struct Mol Biol doi: 10.1038/nsmb.3268 – volume: 92 start-page: 98 issue: 1 year: 2015 ident: ppat.1012844.ref120 article-title: Genetic and phenotypic properties of Vero cell-adapted Japanese encephalitis virus SA14-14-2 vaccine strain variants and a recombinant clone, which demonstrates attenuation and immunogenicity in mice publication-title: Am J Trop Med Hyg doi: 10.4269/ajtmh.14-0427 – volume: 38 start-page: 2636 issue: 11 year: 2020 ident: ppat.1012844.ref157 article-title: A novel amino acid site closely associated with the neurovirulence of live, attenuated Japanese encephalitis vaccine (SA14-14-2 strain) publication-title: Vaccine doi: 10.1016/j.vaccine.2020.01.005 – volume: 89 start-page: 2492 issue: 10 year: 2008 ident: ppat.1012844.ref160 article-title: Association of dengue virus NS1 protein with lipid rafts publication-title: J Gen Virol doi: 10.1099/vir.0.83620-0 – volume: 6 start-page: 69 issue: 1 year: 2014 ident: ppat.1012844.ref038 article-title: Flavivirus entry receptors: an update publication-title: Viruses doi: 10.3390/v6010069 – volume: 73 start-page: 603 issue: 5 year: 1992 ident: ppat.1012844.ref099 article-title: Breakdown of blood-brain barrier by virus-induced cytokine during Japanese encephalitis virus infection publication-title: Int J Exp Pathol – volume: 77 start-page: 1139 issue: 6 year: 2007 ident: ppat.1012844.ref075 article-title: Detection and isolation of Japanese encephalitis virus from blood clots collected during the acute phase of infection publication-title: Am J Trop Med Hyg doi: 10.4269/ajtmh.2007.77.1139 – volume: 89 start-page: 4951 issue: 9 year: 2015 ident: ppat.1012844.ref179 article-title: A basic cluster in the N-terminus of yellow fever virus NS2A contributes to infectious particle production publication-title: J Virol doi: 10.1128/JVI.03351-14 – volume: 16 start-page: e1008260 issue: 4 year: 2020 ident: ppat.1012844.ref080 article-title: Japanese encephalitis virus and its mechanisms of neuroinvasion publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1008260 – volume: 11 start-page: 623 issue: 7 year: 2019 ident: ppat.1012844.ref033 article-title: Crystal structure of the Japanese encephalitis virus capsid protein publication-title: Viruses doi: 10.3390/v11070623 – volume: 91 start-page: e01113 issue: 19 year: 2017 ident: ppat.1012844.ref138 article-title: Rab5 and Rab11 are required for clathrin-dependent endocytosis of Japanese encephalitis virus in BHK-21 cells publication-title: J Virol – volume: 95 start-page: e0059621 issue: 24 year: 2021 ident: ppat.1012844.ref167 article-title: Genome-wide CRISPR screen identifies RACK1 as a critical host factor for flavivirus replication publication-title: J Virol doi: 10.1128/JVI.00596-21 – volume: 5 start-page: 796 issue: 6 year: 2020 ident: ppat.1012844.ref005 article-title: The continued threat of emerging flaviviruses publication-title: Nat Microbiol doi: 10.1038/s41564-020-0714-0 – volume: 87 start-page: 4609 issue: 8 year: 2013 ident: ppat.1012844.ref134 article-title: Membrane topology and function of dengue virus NS2A protein publication-title: J Virol doi: 10.1128/JVI.02424-12 – volume: 87 start-page: 148 issue: 1 year: 2013 ident: ppat.1012844.ref143 article-title: Japanese encephalitis virus infects neuronal cells through a clathrin-independent endocytic mechanism publication-title: J Virol doi: 10.1128/JVI.01399-12 – volume: 17 start-page: 20241 issue: 32 year: 2012 ident: ppat.1012844.ref021 article-title: Does the Japanese encephalitis virus (JEV) represent a threat for human health in Europe? Detection of JEV RNA sequences in birds collected in Italy publication-title: Euro Surveill doi: 10.2807/ese.17.32.20241-en – volume: 201 start-page: 85 year: 2017 ident: ppat.1012844.ref011 article-title: Japanese encephalitis virus infection, diagnosis and control in domestic animals publication-title: Vet Microbiol doi: 10.1016/j.vetmic.2017.01.014 – volume: 195 start-page: 60 issue: 1–2 year: 2008 ident: ppat.1012844.ref095 article-title: Japanese encephalitis virus infection induces IL-18 and IL-1beta in microglia and astrocytes: correlation with in vitro cytokine responsiveness of glial cells and subsequent neuronal death publication-title: J Neuroimmunol doi: 10.1016/j.jneuroim.2008.01.009 – volume: 10 start-page: e1004290 issue: 7 year: 2014 ident: ppat.1012844.ref121 article-title: A molecularly cloned, live-attenuated Japanese encephalitis vaccine SA14-14-2 virus: a conserved single amino acid in the ij hairpin of the viral E glycoprotein determines neurovirulence in mice publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1004290 – volume: 15 start-page: e1007736 issue: 5 year: 2019 ident: ppat.1012844.ref166 article-title: A novel interaction between dengue virus nonstructural protein 1 and the NS4A-2K-4B precursor is required for viral RNA replication but not for formation of the membranous replication organelle publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1007736 – volume: 46 start-page: 378 issue: 5 year: 2021 ident: ppat.1012844.ref053 article-title: Molecular determinants of flavivirus virion assembly publication-title: Trends Biochem Sci doi: 10.1016/j.tibs.2020.12.007 – volume: 34 start-page: 1203 issue: 6 year: 1985 ident: ppat.1012844.ref076 article-title: Fatal outcome in Japanese encephalitis publication-title: Am J Trop Med Hyg doi: 10.4269/ajtmh.1985.34.1203 – volume: 12 start-page: 968 issue: 1 year: 2021 ident: ppat.1012844.ref083 article-title: Pathogenicity and virulence of Japanese encephalitis virus: neuroinflammation and neuronal cell damage publication-title: Virulence doi: 10.1080/21505594.2021.1899674 – volume: 10 start-page: 20 issue: 1 year: 2024 ident: ppat.1012844.ref125 article-title: Roles of NS1 protein in flavivirus pathogenesis publication-title: ACS Infect Dis doi: 10.1021/acsinfecdis.3c00566 – volume: 91 start-page: 108 issue: 2 year: 2010 ident: ppat.1012844.ref012 article-title: Overview: Japanese encephalitis publication-title: Prog Neurobiol doi: 10.1016/j.pneurobio.2010.01.008 – volume: 55 start-page: 483 issue: 5 year: 2007 ident: ppat.1012844.ref092 article-title: Proinflammatory mediators released by activated microglia induces neuronal death in Japanese encephalitis publication-title: Glia doi: 10.1002/glia.20474 – volume: 18 start-page: 567 issue: 5 year: 1985 ident: ppat.1012844.ref087 article-title: Japanese encephalitis: immunocytochemical studies of viral antigen and inflammatory cells in fatal cases publication-title: Ann Neurol doi: 10.1002/ana.410180510 – volume: 267 start-page: 1 year: 2002 ident: ppat.1012844.ref003 article-title: The Japanese encephalitis serological group of flaviviruses: a brief introduction to the group publication-title: Curr Top Microbiol Immunol – volume: 11 start-page: 435 year: 2015 ident: ppat.1012844.ref020 article-title: Epidemiology of Japanese encephalitis: past, present, and future prospects publication-title: Ther Clin Risk Manag – volume: 73 start-page: 6104 issue: 7 year: 1999 ident: ppat.1012844.ref162 article-title: Dengue virus type 1 nonstructural glycoprotein NS1 is secreted from mammalian cells as a soluble hexamer in a glycosylation-dependent fashion publication-title: J Virol doi: 10.1128/JVI.73.7.6104-6110.1999 – volume: 91 start-page: 1028 issue: 4 year: 2010 ident: ppat.1012844.ref094 article-title: Glial activation involvement in neuronal death by Japanese encephalitis virus infection publication-title: J Gen Virol doi: 10.1099/vir.0.013565-0 – volume: 21 start-page: 128 issue: 1 year: 2024 ident: ppat.1012844.ref155 article-title: The mutation of Japanese encephalitis virus envelope protein residue 389 attenuates viral neuroinvasiveness publication-title: Virol J doi: 10.1186/s12985-024-02398-8 – volume: 88 start-page: 1150 issue: 2 year: 2014 ident: ppat.1012844.ref097 article-title: Infection of pericytes in vitro by Japanese encephalitis virus disrupts the integrity of the endothelial barrier publication-title: J Virol doi: 10.1128/JVI.02738-13 – volume: 97 start-page: 2575 issue: 10 year: 2016 ident: ppat.1012844.ref116 article-title: Comparison of the live-attenuated Japanese encephalitis vaccine SA14-14-2 strain with its pre-attenuated virulent parent SA14 strain: similarities and differences in vitro and in vivo publication-title: J Gen Virol doi: 10.1099/jgv.0.000574 – volume: 13 start-page: 6756 issue: 1 year: 2022 ident: ppat.1012844.ref161 article-title: CryoEM structures of the multimeric secreted NS1, a major factor for dengue hemorrhagic fever publication-title: Nat Commun doi: 10.1038/s41467-022-34415-1 – volume: 86 start-page: 7360 issue: 13 year: 2012 ident: ppat.1012844.ref163 article-title: Evidence for a genetic and physical interaction between nonstructural proteins NS1 and NS4B that modulates replication of West Nile virus publication-title: J Virol doi: 10.1128/JVI.00157-12 – start-page: 583 volume-title: Encyclopedia of Virology year: 2021 ident: ppat.1012844.ref032 doi: 10.1016/B978-0-12-809633-8.21503-3 – volume: 161 start-page: 1566 issue: 7 year: 2010 ident: ppat.1012844.ref104 article-title: Japanese encephalitis virus induces matrix metalloproteinase-9 in rat brain astrocytes via NF-kappaB signalling dependent on MAPKs and reactive oxygen species publication-title: Br J Pharmacol doi: 10.1111/j.1476-5381.2010.00982.x – volume: 78 start-page: 12107 issue: 22 year: 2004 ident: ppat.1012844.ref108 article-title: Upregulation of RANTES gene expression in neuroglia by Japanese encephalitis virus infection publication-title: J Virol doi: 10.1128/JVI.78.22.12107-12119.2004 – ident: ppat.1012844.ref025 – volume: 5 start-page: 365 issue: 4 year: 2009 ident: ppat.1012844.ref046 article-title: Composition and three-dimensional architecture of the dengue virus replication and assembly sites publication-title: Cell Host Microbe doi: 10.1016/j.chom.2009.03.007 – volume: 12 start-page: 638694 year: 2021 ident: ppat.1012844.ref067 article-title: Japanese encephalitis virus infected human monocyte-derived dendritic cells activate a transcriptional network leading to an antiviral inflammatory response publication-title: Front Immunol doi: 10.3389/fimmu.2021.638694 – volume: 49 start-page: 607 issue: 7 year: 2000 ident: ppat.1012844.ref109 article-title: Secretion of the chemokine interleukin-8 during Japanese encephalitis virus infection publication-title: J Med Microbiol doi: 10.1099/0022-1317-49-7-607 – volume: 111 start-page: 187 year: 2017 ident: ppat.1012844.ref118 article-title: Enhanced cytopathic effect of Japanese encephalitis virus strain SA14-14-2: probable association of mutation in amino acid of its envelope protein publication-title: Microb Pathog doi: 10.1016/j.micpath.2017.08.046 – volume: 26 start-page: 606 issue: 5 year: 2019 ident: ppat.1012844.ref176 article-title: Dengue NS2A protein orchestrates virus assembly publication-title: Cell Host Microbe doi: 10.1016/j.chom.2019.09.015 – volume: 25 start-page: 13 issue: 1 year: 2018 ident: ppat.1012844.ref122 article-title: Structural biology of Zika virus and other flaviviruses publication-title: Nat Struct Mol Biol doi: 10.1038/s41594-017-0010-8 – volume: 78 start-page: 4939 issue: 11 year: 2021 ident: ppat.1012844.ref048 article-title: Compartmentalized replication organelle of flavivirus at the ER and the factors involved publication-title: Cell Mol Life Sci doi: 10.1007/s00018-021-03834-6 – volume: 130 start-page: 131 issue: 1–2 year: 1993 ident: ppat.1012844.ref136 article-title: Comparison of replication rates and pathogenicities between the SA14 parent and SA14-14-2 vaccine strains of Japanese encephalitis virus in mouse brain neurons publication-title: Arch Virol doi: 10.1007/BF01319002 – volume: 14 start-page: 2213 issue: 10 year: 2022 ident: ppat.1012844.ref002 article-title: The Japanese encephalitis antigenic complex viruses: from structure to immunity publication-title: Viruses doi: 10.3390/v14102213 – volume: 118 start-page: 4448 issue: 8 year: 2018 ident: ppat.1012844.ref060 article-title: Biochemistry and molecular biology of flaviviruses publication-title: Chem Rev doi: 10.1021/acs.chemrev.7b00719 – volume: 10 start-page: e0124318 issue: 4 year: 2015 ident: ppat.1012844.ref041 article-title: Profiling of viral proteins expressed from the genomic RNA of Japanese encephalitis virus using a panel of 15 region-specific polyclonal rabbit antisera: implications for viral gene expression publication-title: PLoS One doi: 10.1371/journal.pone.0124318 – volume: 10 start-page: 706 issue: 1 year: 2019 ident: ppat.1012844.ref106 article-title: Japanese encephalitis virus neuropenetrance is driven by mast cell chymase publication-title: Nat Commun doi: 10.1038/s41467-019-08641-z – volume: 14 start-page: 298 issue: 5 year: 2018 ident: ppat.1012844.ref026 article-title: Japanese encephalitis—the prospects for new treatments publication-title: Nat Rev Neurol doi: 10.1038/nrneurol.2018.30 – volume: 9 start-page: 1630 issue: 7 year: 2007 ident: ppat.1012844.ref061 article-title: The skin as interface in the transmission of arthropod-borne pathogens publication-title: Cell Microbiol doi: 10.1111/j.1462-5822.2007.00955.x – volume: 77 start-page: 6450 issue: 11 year: 2003 ident: ppat.1012844.ref186 article-title: Development and application of a reverse genetics system for Japanese encephalitis virus publication-title: J Virol doi: 10.1128/JVI.77.11.6450-6465.2003 – volume: 5 start-page: 255 issue: 1 year: 2018 ident: ppat.1012844.ref082 article-title: Flaviviruses and the central nervous system: revisiting neuropathological concepts publication-title: Annu Rev Virol doi: 10.1146/annurev-virology-092917-043439 – volume: 190 start-page: 1618 issue: 9 year: 2004 ident: ppat.1012844.ref102 article-title: Proinflammatory cytokines and chemokines in humans with Japanese encephalitis publication-title: J Infect Dis doi: 10.1086/423328 – volume: 54 start-page: 17 year: 2009 ident: ppat.1012844.ref017 article-title: Ecology and geographical expansion of Japanese encephalitis virus publication-title: Annu Rev Entomol doi: 10.1146/annurev.ento.54.110807.090510 – volume: 16 start-page: e0010361 issue: 5 year: 2022 ident: ppat.1012844.ref015 article-title: Estimates of Japanese encephalitis mortality and morbidity: a systematic review and modeling analysis publication-title: PLoS Negl Trop Dis doi: 10.1371/journal.pntd.0010361 – volume: 96 start-page: 793 issue: 4 year: 2015 ident: ppat.1012844.ref140 article-title: Heat shock cognate protein 70 isoform D is required for clathrin-dependent endocytosis of Japanese encephalitis virus in C6/36 cells publication-title: J Gen Virol doi: 10.1099/jgv.0.000015 – volume: 8 start-page: e1002655 issue: 4 year: 2012 ident: ppat.1012844.ref069 article-title: CLEC5A regulates Japanese encephalitis virus-induced neuroinflammation and lethality publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1002655 – volume: 6 start-page: 513 issue: 6 year: 1988 ident: ppat.1012844.ref137 article-title: Japanese encephalitis virus live-attenuated vaccine, Chinese strain SA14-14-2; adaptation to primary canine kidney cell cultures and preparation of a vaccine for human use publication-title: Vaccine doi: 10.1016/0264-410X(88)90103-X – volume: 9 start-page: 1 year: 2022 ident: ppat.1012844.ref006 article-title: Acute neurologic emerging flaviviruses publication-title: Ther Adv Infect Dis – volume: 34 start-page: 459 issue: 5 year: 1990 ident: ppat.1012844.ref068 article-title: Effect of cytokines on Japanese encephalitis virus production by human monocytes publication-title: Microbiol Immunol doi: 10.1111/j.1348-0421.1990.tb01028.x – volume: 8 start-page: e2980 issue: 8 year: 2014 ident: ppat.1012844.ref091 article-title: Neuropathogenesis of Japanese encephalitis in a primate model publication-title: PLoS Negl Trop Dis doi: 10.1371/journal.pntd.0002980 – volume: 6 start-page: 112 issue: 1 year: 2021 ident: ppat.1012844.ref110 article-title: Japanese encephalitis virus live attenuated vaccine strains display altered immunogenicity, virulence and genetic diversity publication-title: NPJ Vaccines doi: 10.1038/s41541-021-00371-y – volume: 11 start-page: e1005277 issue: 11 year: 2015 ident: ppat.1012844.ref164 article-title: Dengue virus non-structural protein 1 modulates infectious particle production via interaction with the structural proteins publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1005277 – volume: 23 start-page: 456 issue: 5 year: 2016 ident: ppat.1012844.ref131 article-title: Zika virus NS1 structure reveals diversity of electrostatic surfaces among flaviviruses publication-title: Nat Struct Mol Biol doi: 10.1038/nsmb.3213 – volume: 14 start-page: 1205002 year: 2023 ident: ppat.1012844.ref123 article-title: Secretory pathways and multiple functions of nonstructural protein 1 in flavivirus infection publication-title: Front Immunol doi: 10.3389/fimmu.2023.1205002 – volume: 115 start-page: 537 issue: 2 year: 2010 ident: ppat.1012844.ref141 article-title: Critical role of lipid rafts in virus entry and activation of phosphoinositide 3’ kinase/Akt signaling during early stages of Japanese encephalitis virus infection in neural stem/progenitor cells publication-title: J Neurochem doi: 10.1111/j.1471-4159.2010.06951.x – volume: 25 start-page: S16 issue: Suppl 1 year: 2018 ident: ppat.1012844.ref008 article-title: Japanese encephalitis: the vectors, ecology and potential for expansion publication-title: J Travel Med doi: 10.1093/jtm/tay009 – volume: 13 start-page: 956 issue: 6 year: 2021 ident: ppat.1012844.ref052 article-title: Molecular insights into the flavivirus replication complex publication-title: Viruses doi: 10.3390/v13060956 – volume: 227 start-page: 115 year: 2017 ident: ppat.1012844.ref034 article-title: The flavivirus capsid protein: structure, function and perspectives towards drug design publication-title: Virus Res doi: 10.1016/j.virusres.2016.10.005 – volume: 3 start-page: 3 issue: 1 year: 2013 ident: ppat.1012844.ref040 article-title: Flaviviruses: braking the entering publication-title: Curr Opin Virol doi: 10.1016/j.coviro.2012.12.001 – volume: 55 start-page: 717 issue: 8 year: 2009 ident: ppat.1012844.ref107 article-title: Understanding the molecular mechanism of blood-brain barrier damage in an experimental model of Japanese encephalitis: correlation with minocycline administration as a therapeutic agent publication-title: Neurochem Int doi: 10.1016/j.neuint.2009.07.006 – volume: 5 start-page: 95 issue: 2 year: 1991 ident: ppat.1012844.ref112 article-title: Identification of mutations that occurred on the genome of Japanese encephalitis virus during the attenuation process publication-title: Virus Genes doi: 10.1007/BF00571925 – volume: 85 start-page: 635 issue: 3 year: 2004 ident: ppat.1012844.ref073 article-title: A model to study neurotropism and persistency of Japanese encephalitis virus infection in human neuroblastoma cells and leukocytes publication-title: J Gen Virol doi: 10.1099/vir.0.19426-0 – volume: 484 start-page: 113 year: 2015 ident: ppat.1012844.ref172 article-title: Dengue virus NS1 protein interacts with the ribosomal protein RPL18: this interaction is required for viral translation and replication in Huh-7 cells publication-title: Virology doi: 10.1016/j.virol.2015.05.017 – volume: 8 start-page: 14 issue: 1 year: 2017 ident: ppat.1012844.ref035 article-title: Near-atomic structure of Japanese encephalitis virus reveals critical determinants of virulence and stability publication-title: Nat Commun doi: 10.1038/s41467-017-00024-6 – volume: 14 start-page: 514 issue: 6 year: 2008 ident: ppat.1012844.ref079 article-title: The blood-brain barrier in the cerebrum is the initial site for the Japanese encephalitis virus entering the central nervous system publication-title: J Neurovirol doi: 10.1080/13550280802339643 – volume: 373 start-page: 426 issue: 2 year: 2008 ident: ppat.1012844.ref050 article-title: Crystal structure of the catalytic domain of Japanese encephalitis virus NS3 helicase/nucleoside triphosphatase at a resolution of 1.8 A publication-title: Virology doi: 10.1016/j.virol.2007.12.018 – volume: 9 start-page: 12 year: 2012 ident: ppat.1012844.ref105 article-title: Japanese encephalitis virus induces matrix metalloproteinase-9 expression via a ROS/c-Src/PDGFR/PI3K/Akt/MAPKs-dependent AP-1 pathway in rat brain astrocytes publication-title: J Neuroinflammation doi: 10.1186/1742-2094-9-12 – volume: 13 start-page: 1 issue: 6 year: 2017 ident: ppat.1012844.ref028 article-title: Japanese encephalitis vaccines: immunogenicity, protective efficacy, effectiveness, and impact on the burden of disease publication-title: Hum Vaccin Immunother doi: 10.1080/21645515.2017.1285472 – volume: 9 start-page: e0004074 issue: 12 year: 2015 ident: ppat.1012844.ref010 article-title: Rethinking Japanese encephalitis virus transmission: a framework for implicating host and vector species publication-title: PLoS Negl Trop Dis doi: 10.1371/journal.pntd.0004074 – volume: 171 start-page: 1144 issue: 5 year: 1995 ident: ppat.1012844.ref153 article-title: Characterization of a highly attenuated Japanese encephalitis virus generated from molecularly cloned cDNA publication-title: J Infect Dis doi: 10.1093/infdis/171.5.1144 – volume: 10 start-page: S98 issue: 12 Suppl year: 2004 ident: ppat.1012844.ref030 article-title: Emerging flaviviruses: the spread and resurgence of Japanese encephalitis, West Nile and dengue viruses publication-title: Nat Med doi: 10.1038/nm1144 – volume: 9 start-page: e1003549 issue: 8 year: 2013 ident: ppat.1012844.ref049 article-title: Crystal structure of the full-length Japanese encephalitis virus NS5 reveals a conserved methyltransferase-polymerase interface publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1003549 – volume: 103 start-page: 771 issue: 5 year: 2019 ident: ppat.1012844.ref077 article-title: Mechanisms of pathogen invasion into the central nervous system publication-title: Neuron doi: 10.1016/j.neuron.2019.07.015 – volume: 29 start-page: 855 issue: 4 year: 2011 ident: ppat.1012844.ref064 article-title: Infection of mouse bone marrow-derived dendritic cells by live attenuated Japanese encephalitis virus induces cells maturation and triggers T cells activation publication-title: Vaccine doi: 10.1016/j.vaccine.2010.09.108 – volume: 100 start-page: 1135 issue: 12 year: 2006 ident: ppat.1012844.ref084 article-title: A preliminary neuropathological study of Japanese encephalitis in humans and a mouse model publication-title: Trans R Soc Trop Med Hyg doi: 10.1016/j.trstmh.2006.02.008 – volume: 76 start-page: 4773 issue: 10 year: 2002 ident: ppat.1012844.ref175 article-title: Mutations in the yellow fever virus nonstructural protein NS2A selectively block production of infectious particles publication-title: J Virol doi: 10.1128/JVI.76.10.4773-4784.2002 – volume: 80 start-page: 723 issue: 2 year: 2006 ident: ppat.1012844.ref187 article-title: Identification of 5’ and 3’ cis-acting elements of the porcine reproductive and respiratory syndrome virus: acquisition of novel 5’ AU-rich sequences restored replication of a 5’-proximal 7-nucleotide deletion mutant publication-title: J Virol doi: 10.1128/JVI.80.2.723-736.2006 – volume: 10 start-page: e0199022 issue: 6 year: 2022 ident: ppat.1012844.ref156 article-title: Virulence and cross-protection conferred by an attenuated genotype I-based chimeric Japanese encephalitis virus strain harboring the E protein of genotype V in mice publication-title: Microbiol Spectr doi: 10.1128/spectrum.01990-22 – volume: 9 start-page: e51027 year: 2020 ident: ppat.1012844.ref029 article-title: Estimates of the global burden of Japanese encephalitis and the impact of vaccination from 2000–2015 publication-title: eLife doi: 10.7554/eLife.51027 – volume: 89 start-page: 60 year: 2018 ident: ppat.1012844.ref096 article-title: Brain microvascular endothelial-astrocyte cell responses following Japanese encephalitis virus infection in an in vitro human blood-brain barrier model publication-title: Mol Cell Neurosci doi: 10.1016/j.mcn.2018.04.002 – volume: 71 start-page: 8475 issue: 11 year: 1997 ident: ppat.1012844.ref057 article-title: Proteolytic activation of tick-borne encephalitis virus by furin publication-title: J Virol doi: 10.1128/jvi.71.11.8475-8481.1997 – volume: 111 start-page: 4285 issue: 11 year: 2014 ident: ppat.1012844.ref127 article-title: Structural basis of flavivirus NS1 assembly and antibody recognition publication-title: Proc Natl Acad Sci U S A doi: 10.1073/pnas.1322036111 – volume: 90 start-page: 9570 issue: 21 year: 2016 ident: ppat.1012844.ref174 article-title: Inhibition of the membrane attack complex by dengue virus NS1 through interaction with vitronectin and terminal complement proteins publication-title: J Virol doi: 10.1128/JVI.00912-16 – volume: 91 start-page: e01836 issue: 12 year: 2017 ident: ppat.1012844.ref181 article-title: Mutagenesis of dengue virus protein NS2A revealed a novel domain responsible for virus-induced cytopathic effect and interactions between NS2A and NS2B transmembrane segments publication-title: J Virol – volume: 103 start-page: 19111 issue: 50 year: 2006 ident: ppat.1012844.ref170 article-title: West Nile virus nonstructural protein NS1 inhibits complement activation by binding the regulatory protein factor H publication-title: Proc Natl Acad Sci U S A doi: 10.1073/pnas.0605668103 – volume: 22 start-page: 2604 issue: 11 year: 2003 ident: ppat.1012844.ref056 article-title: Structures of immature flavivirus particles publication-title: EMBO J doi: 10.1093/emboj/cdg270 – volume: 343 start-page: 881 issue: 6173 year: 2014 ident: ppat.1012844.ref126 article-title: Flavivirus NS1 structures reveal surfaces for associations with membranes and the immune system publication-title: Science doi: 10.1126/science.1247749 – volume: 568 start-page: 77 year: 2022 ident: ppat.1012844.ref039 article-title: The interactions of flaviviruses with cellular receptors: implications for virus entry publication-title: Virology doi: 10.1016/j.virol.2022.02.001 – volume: 21 start-page: 3900 issue: 13 year: 2017 ident: ppat.1012844.ref168 article-title: A global interactome map of the dengue virus NS1 identifies virus restriction and dependency host factors publication-title: Cell Rep doi: 10.1016/j.celrep.2017.11.094 – volume: 3 start-page: 13 issue: 1 year: 2005 ident: ppat.1012844.ref036 article-title: A structural perspective of the flavivirus life cycle publication-title: Nat Rev Microbiol doi: 10.1038/nrmicro1067 – volume: 84 start-page: 1641 issue: 3 year: 2010 ident: ppat.1012844.ref043 article-title: NS1’ of flaviviruses in the Japanese encephalitis virus serogroup is a product of ribosomal frameshifting and plays a role in viral neuroinvasiveness publication-title: J Virol doi: 10.1128/JVI.01979-09 – volume: 223 start-page: 79 issue: 1 year: 1996 ident: ppat.1012844.ref149 article-title: Generation and characterization of organ-tropism mutants of Japanese encephalitis virus in vivo and in vitro publication-title: Virology doi: 10.1006/viro.1996.0457 – volume: 336 start-page: 199222 year: 2023 ident: ppat.1012844.ref124 article-title: Making sense of flavivirus non-strctural protein 1 in innate immune evasion and inducing tissue-specific damage publication-title: Virus Res doi: 10.1016/j.virusres.2023.199222 – volume: 106 start-page: 1624 issue: 4 year: 2008 ident: ppat.1012844.ref088 article-title: Japanese encephalitis virus infects neural progenitor cells and decreases their proliferation publication-title: J Neurochem doi: 10.1111/j.1471-4159.2008.05511.x – volume: 351 start-page: 370 issue: 4 year: 2004 ident: ppat.1012844.ref004 article-title: Flavivirus encephalitis publication-title: N Engl J Med doi: 10.1056/NEJMra030476 – volume: 92 start-page: e00108 issue: 22 year: 2018 ident: ppat.1012844.ref151 article-title: Acidity/alkalinity of Japanese encephalitis virus E protein residue 138 alters neurovirulence in mice publication-title: J Virol doi: 10.1128/JVI.00108-18 – volume: 9 start-page: 291 issue: 10 year: 2017 ident: ppat.1012844.ref133 article-title: Innate immune evasion mediated by Flaviviridae non-structural proteins publication-title: Viruses doi: 10.3390/v9100291 – volume: 183 start-page: 2462 issue: 4 year: 2009 ident: ppat.1012844.ref063 article-title: Functional modulation of dendritic cells and macrophages by Japanese encephalitis virus through MyD88 adaptor molecule-dependent and -independent pathways publication-title: J Immunol doi: 10.4049/jimmunol.0801952 – volume: 69 start-page: 423 issue: 3 year: 1988 ident: ppat.1012844.ref071 article-title: Immunopathological study of spleen during Japanese encephalitis virus infection in mice publication-title: Br J Exp Pathol – volume: 44 start-page: 1363 issue: 5 year: 2014 ident: ppat.1012844.ref065 article-title: Japanese encephalitis virus expands regulatory T cells by increasing the expression of PD-L1 on dendritic cells publication-title: Eur J Immunol doi: 10.1002/eji.201343701 – volume: 49 start-page: 4 issue: 1 year: 2010 ident: ppat.1012844.ref101 article-title: Expression profile of Japanese encephalitis virus induced neuroinflammation and its implication in disease severity publication-title: J Clin Virol doi: 10.1016/j.jcv.2010.06.009 |
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Snippet | Japanese encephalitis virus (JEV), a neuroinvasive and neurovirulent orthoflavivirus, can be prevented in humans with the SA
14
-14-2 vaccine, a... Japanese encephalitis virus (JEV), a neuroinvasive and neurovirulent orthoflavivirus, can be prevented in humans with the SA14-14-2 vaccine, a live-attenuated... |
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Title | Key virulence factors responsible for differences in pathogenicity between clinically proven live-attenuated Japanese encephalitis vaccine SA14-14-2 and its pre-attenuated highly virulent parent SA14 |
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