Digital genotyping of avian influenza viruses of H7 subtype detected in central Europe in 2007–2011

• Published in: Virus research Vol. 165; no. 2; pp. 126 - 133
• Main Authors: Nagy, Alexander, Černíková, Lenka, Křivda, Vlastimil, Horníčková, Jitka
• Format: Journal Article
• Language: English
• Published: Netherlands Elsevier B.V 01.05.2012
• Subjects: Animals; Birds; Cluster Analysis; Computational Biology - methods; Digital genotyping; Europe - epidemiology; Genotype; Genotyping; H7N7; H7N9; Influenza; Influenza A virus - classification; Influenza A virus - genetics; Influenza A virus - isolation & purification; Influenza in Birds - epidemiology; Influenza in Birds - virology; LPAI; Molecular Epidemiology - methods; Molecular Sequence Data; Molecular Typing - methods; Phylogeny; Sequence Analysis, DNA; Virology - methods; Europe; H7N7; H7N9; Genotyping; Influenza; Digital genotyping; LPAI

► We developed a digital genotyping of avian influenza viruses. ► We characterized the central European H7 influenza A viruses from 2007 to 2011. ► We characterized the genetic relationships between various influenza virus subtypes. ► The digital genotyping provides a novel and powerful genotyping a...