From acidophilic to ornithogenic: microbial community dynamics in moss banks altered by gentoo penguins
The study explores the indirect impact of climate change driven by gentoo's penguin colonization pressure on the microbial communities of moss banks formed by Tall moss turf subformation in central maritime Antarctica. Microbial communities and chemical composition of the differently affected m...
Saved in:
Published in | Frontiers in microbiology Vol. 15; p. 1362975 |
---|---|
Main Authors | , , , , , , , |
Format | Journal Article |
Language | English |
Published |
Switzerland
Frontiers Media S.A
2024
|
Subjects | |
Online Access | Get full text |
Cover
Loading…
Abstract | The study explores the indirect impact of climate change driven by gentoo's penguin colonization pressure on the microbial communities of moss banks formed by Tall moss turf subformation in central maritime Antarctica.
Microbial communities and chemical composition of the differently affected moss banks (Unaffected, Impacted and Desolated) located on Galindez Island and Сape Tuxen on the mainland of Kyiv Peninsula were analyzed.
The native microbiota of the moss banks' peat was analyzed for the first time, revealing a predominant presence of Acidobacteria (32.2 ± 14.4%), followed by Actinobacteria (15.1 ± 4.0%) and Alphaproteobacteria (9.7 ± 4.1%). Penguin colonization and subsequent desolation of moss banks resulted in an increase in peat pH (from 4.7 ± 0.05 to 7.2 ± 0.6) and elevated concentrations of soluble nitrogen (from 1.8 ± 0.4 to 46.9 ± 2.1 DIN, mg/kg) and soluble phosphorus compounds (from 3.6 ± 2.6 to 20.0 ± 1.8 DIP, mg/kg). The contrasting composition of peat and penguin feces led to the elimination of the initial peat microbiota, with an increase in Betaproteobacteria (from 1.3 ± 0.8% to 30.5 ± 23%) and Bacteroidota (from 5.5 ± 3.7% to 19.0 ± 3.7%) proportional to the intensity of penguins' impact, accompanied by a decrease in community diversity. Microbial taxa associated with birds' guts, such as
and
, emerged in Impacted and Desolated moss banks, along with bacteria likely benefiting from eutrophication. The changes in the functional capacity of the penguin-affected peat microbial communities were also detected. The nitrogen-cycling genes that regulate the conversion of urea into ammonia, nitrite oxide, and nitrate oxide (
,
,
,
,
) had elevated copy numbers in the affected peat. Desolated peat samples exhibit the highest nitrogen-cycle gene numbers, significantly differing from Unaffected peat (
< 0.05).
The expansion of gentoo penguins induced by climate change led to the replacement of acidophilic microbiomes associated with moss banks, shaping a new microbial community influenced by penguin guano's chemical and microbial composition. |
---|---|
AbstractList | Introduction
The study explores the indirect impact of climate change driven by gentoo’s penguin colonization pressure on the microbial communities of moss banks formed by Tall moss turf subformation in central maritime Antarctica.
Methods
Microbial communities and chemical composition of the differently affected moss banks (Unaffected, Impacted and Desolated) located on Galindez Island and Сape Tuxen on the mainland of Kyiv Peninsula were analyzed.
Results
The native microbiota of the moss banks’ peat was analyzed for the first time, revealing a predominant presence of Acidobacteria (32.2 ± 14.4%), followed by Actinobacteria (15.1 ± 4.0%) and Alphaproteobacteria (9.7 ± 4.1%). Penguin colonization and subsequent desolation of moss banks resulted in an increase in peat pH (from 4.7 ± 0.05 to 7.2 ± 0.6) and elevated concentrations of soluble nitrogen (from 1.8 ± 0.4 to 46.9 ± 2.1 DIN, mg/kg) and soluble phosphorus compounds (from 3.6 ± 2.6 to 20.0 ± 1.8 DIP, mg/kg). The contrasting composition of peat and penguin feces led to the elimination of the initial peat microbiota, with an increase in Betaproteobacteria (from 1.3 ± 0.8% to 30.5 ± 23%) and Bacteroidota (from 5.5 ± 3.7% to 19.0 ± 3.7%) proportional to the intensity of penguins’ impact, accompanied by a decrease in community diversity. Microbial taxa associated with birds’ guts, such as
Gottschalkia
and
Tissierella
, emerged in Impacted and Desolated moss banks, along with bacteria likely benefiting from eutrophication. The changes in the functional capacity of the penguin-affected peat microbial communities were also detected. The nitrogen-cycling genes that regulate the conversion of urea into ammonia, nitrite oxide, and nitrate oxide (
ureC
,
amoA
,
nirS
,
nosZ
,
nxrB
) had elevated copy numbers in the affected peat. Desolated peat samples exhibit the highest nitrogen-cycle gene numbers, significantly differing from Unaffected peat (
p
< 0.05).
Discussion
The expansion of gentoo penguins induced by climate change led to the replacement of acidophilic microbiomes associated with moss banks, shaping a new microbial community influenced by penguin guano’s chemical and microbial composition. IntroductionThe study explores the indirect impact of climate change driven by gentoo’s penguin colonization pressure on the microbial communities of moss banks formed by Tall moss turf subformation in central maritime Antarctica.MethodsMicrobial communities and chemical composition of the differently affected moss banks (Unaffected, Impacted and Desolated) located on Galindez Island and Сape Tuxen on the mainland of Kyiv Peninsula were analyzed.ResultsThe native microbiota of the moss banks’ peat was analyzed for the first time, revealing a predominant presence of Acidobacteria (32.2 ± 14.4%), followed by Actinobacteria (15.1 ± 4.0%) and Alphaproteobacteria (9.7 ± 4.1%). Penguin colonization and subsequent desolation of moss banks resulted in an increase in peat pH (from 4.7 ± 0.05 to 7.2 ± 0.6) and elevated concentrations of soluble nitrogen (from 1.8 ± 0.4 to 46.9 ± 2.1 DIN, mg/kg) and soluble phosphorus compounds (from 3.6 ± 2.6 to 20.0 ± 1.8 DIP, mg/kg). The contrasting composition of peat and penguin feces led to the elimination of the initial peat microbiota, with an increase in Betaproteobacteria (from 1.3 ± 0.8% to 30.5 ± 23%) and Bacteroidota (from 5.5 ± 3.7% to 19.0 ± 3.7%) proportional to the intensity of penguins’ impact, accompanied by a decrease in community diversity. Microbial taxa associated with birds’ guts, such as Gottschalkia and Tissierella, emerged in Impacted and Desolated moss banks, along with bacteria likely benefiting from eutrophication. The changes in the functional capacity of the penguin-affected peat microbial communities were also detected. The nitrogen-cycling genes that regulate the conversion of urea into ammonia, nitrite oxide, and nitrate oxide (ureC, amoA, nirS, nosZ, nxrB) had elevated copy numbers in the affected peat. Desolated peat samples exhibit the highest nitrogen-cycle gene numbers, significantly differing from Unaffected peat (p < 0.05).DiscussionThe expansion of gentoo penguins induced by climate change led to the replacement of acidophilic microbiomes associated with moss banks, shaping a new microbial community influenced by penguin guano’s chemical and microbial composition. The study explores the indirect impact of climate change driven by gentoo's penguin colonization pressure on the microbial communities of moss banks formed by Tall moss turf subformation in central maritime Antarctica. Microbial communities and chemical composition of the differently affected moss banks (Unaffected, Impacted and Desolated) located on Galindez Island and Сape Tuxen on the mainland of Kyiv Peninsula were analyzed. The native microbiota of the moss banks' peat was analyzed for the first time, revealing a predominant presence of Acidobacteria (32.2 ± 14.4%), followed by Actinobacteria (15.1 ± 4.0%) and Alphaproteobacteria (9.7 ± 4.1%). Penguin colonization and subsequent desolation of moss banks resulted in an increase in peat pH (from 4.7 ± 0.05 to 7.2 ± 0.6) and elevated concentrations of soluble nitrogen (from 1.8 ± 0.4 to 46.9 ± 2.1 DIN, mg/kg) and soluble phosphorus compounds (from 3.6 ± 2.6 to 20.0 ± 1.8 DIP, mg/kg). The contrasting composition of peat and penguin feces led to the elimination of the initial peat microbiota, with an increase in Betaproteobacteria (from 1.3 ± 0.8% to 30.5 ± 23%) and Bacteroidota (from 5.5 ± 3.7% to 19.0 ± 3.7%) proportional to the intensity of penguins' impact, accompanied by a decrease in community diversity. Microbial taxa associated with birds' guts, such as and , emerged in Impacted and Desolated moss banks, along with bacteria likely benefiting from eutrophication. The changes in the functional capacity of the penguin-affected peat microbial communities were also detected. The nitrogen-cycling genes that regulate the conversion of urea into ammonia, nitrite oxide, and nitrate oxide ( , , , , ) had elevated copy numbers in the affected peat. Desolated peat samples exhibit the highest nitrogen-cycle gene numbers, significantly differing from Unaffected peat ( < 0.05). The expansion of gentoo penguins induced by climate change led to the replacement of acidophilic microbiomes associated with moss banks, shaping a new microbial community influenced by penguin guano's chemical and microbial composition. |
Author | Yerkhova, Anna Stelmakh, Olesia Dzyndra, Marta Dykyi, Evgen Prekrasna-Kviatkovska, Yevheniia Pavlovska, Mariia Yarovyi, Oleksandr Parnikoza, Ivan |
Author_xml | – sequence: 1 givenname: Yevheniia surname: Prekrasna-Kviatkovska fullname: Prekrasna-Kviatkovska, Yevheniia organization: Biology and Ecology Department, State Institution National Antarctic Scientific Center, Kyiv, Ukraine – sequence: 2 givenname: Ivan surname: Parnikoza fullname: Parnikoza, Ivan organization: Faculty of Natural Science, National University of "Kyiv-Mohyla Academy", Kyiv, Ukraine – sequence: 3 givenname: Anna surname: Yerkhova fullname: Yerkhova, Anna organization: Biomedical Institute, Open International University of Human Development Ukraine, Kyiv, Ukraine – sequence: 4 givenname: Olesia surname: Stelmakh fullname: Stelmakh, Olesia organization: Faculty of Molecular Biology and Biotechnology, Kyiv Academic University, Kyiv, Ukraine – sequence: 5 givenname: Mariia surname: Pavlovska fullname: Pavlovska, Mariia organization: Faculty of Plant Protection, Biotechnology and Ecology, National University of Life and Environmental Sciences of Ukraine, Kyiv, Ukraine – sequence: 6 givenname: Marta surname: Dzyndra fullname: Dzyndra, Marta organization: Biology and Ecology Department, State Institution National Antarctic Scientific Center, Kyiv, Ukraine – sequence: 7 givenname: Oleksandr surname: Yarovyi fullname: Yarovyi, Oleksandr organization: Biology and Ecology Department, State Institution National Antarctic Scientific Center, Kyiv, Ukraine – sequence: 8 givenname: Evgen surname: Dykyi fullname: Dykyi, Evgen organization: Biology and Ecology Department, State Institution National Antarctic Scientific Center, Kyiv, Ukraine |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/38525081$$D View this record in MEDLINE/PubMed |
BookMark | eNpNkUlPJCEYhonRuP8BDxOOc-ke9qK8TYw6JiZz0cQbYW1xqqCFqkP_e2m7x8gByMe7JDxn4DDl5AG4wmhJqex_hTFasySIsCWmgvQdPwCnWAi2oIi8HH67n4DLWt9QWwyRth-DEyo54UjiU7C6K3mE2kaX169xiBZOGeaS4vSaVz5Few1bUckm6gHaPI5ze9pAt0m6zSuMCY65Vmh0-lehHiZfvINmA5t5yhmufVrNMdULcBT0UP3l_jwHz3e3Tzd_Fo9_7x9ufj8uLBVsWjjWS0qsJ4gF2jmiRTAY64Atp6GT0tFAg0GMYm6tEM71WxW3wjMvJWb0HDzscl3Wb2pd4qjLRmUd1ecgl5XSZYp28Moxo61AsjN9zxzFBmGvqdGtlTtPupb1c5e1Lvl99nVSY6zWD4NOPs9VkV7yrmeciSYlO2n7qlqLD1_VGKktL_XJS215qT2vZvqxz5_N6N2X5T8d-gEJ15Up |
Cites_doi | 10.1111/gcb.16437 10.1016/j.biortech.2013.04.112 10.1128/mbio.03714-21 10.1371/journal.pone.0060568 10.1016/j.atmosenv.2016.03.016 10.3389/fmicb.2015.01188 10.1099/ijs.0.000013 10.1098/rsbl.2020.0708 10.1007/s00300-023-03197-7 10.33275/1727-7485.1(17).2018.34 10.1007/978-3-319-24277-4 10.1038/ismej.2010.35 10.1038/ismej.2011.124 10.1128/AEM.01775-20 10.1007/s00792-021-01235-y 10.1093/bioinformatics/btp616 10.2307/1551679 10.1111/j.2517-6161.1995.tb02031.x 10.2307/1313632 10.1016/j.hjb.2017.11.003 10.1038/s41598-017-03781-y 10.1371/journal.pone.0090785 10.2312/polarforschung.86.2.83 10.1023/A:1026021217991 10.3389/fmicb.2018.00552 10.1371/journal.pone.0181901 10.1007/BF00051979 10.1264/jsme2.ME17188 10.1093/bioinformatics/btr381 10.1139/W08-126 10.1007/s10482-019-01341-0 10.1038/nature02996 10.1099/ijsem.0.003739 10.1093/bioinformatics/btw313 10.1016/j.scitotenv.2021.147693 10.1890/11-1588.1 10.1128/mSystems.00119-17 10.1038/ngeo1671 10.1093/nar/gks1219 10.1002/mbo3.66 10.1002/2016GL069380 10.1099/ijs.0.02298-0 10.21425/F5FBG43165 10.1017/S0954102009990204 10.1099/ijsem.0.002008 10.1186/s12862-015-0502-2 10.1007/s10533-014-0042-7 10.1038/nmeth.f.303 10.1016/j.scitotenv.2020.136714 10.1111/j.1462-2920.2008.01644.x 10.2307/2259252 10.1038/nmeth.2604 10.1007/s12275-012-2655-7 10.1093/bioinformatics/btr507 10.2307/1939479 |
ContentType | Journal Article |
Copyright | Copyright © 2024 Prekrasna-Kviatkovska, Parnikoza, Yerkhova, Stelmakh, Pavlovska, Dzyndra, Yarovyi, and Dykyi. |
Copyright_xml | – notice: Copyright © 2024 Prekrasna-Kviatkovska, Parnikoza, Yerkhova, Stelmakh, Pavlovska, Dzyndra, Yarovyi, and Dykyi. |
DBID | NPM AAYXX CITATION 7X8 DOA |
DOI | 10.3389/fmicb.2024.1362975 |
DatabaseName | PubMed CrossRef MEDLINE - Academic DOAJ Directory of Open Access Journals |
DatabaseTitle | PubMed CrossRef MEDLINE - Academic |
DatabaseTitleList | CrossRef PubMed MEDLINE - Academic |
Database_xml | – sequence: 1 dbid: DOA name: DOAJ Directory of Open Access Journals url: https://www.doaj.org/ sourceTypes: Open Website – sequence: 2 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Biology |
EISSN | 1664-302X |
EndPage | 1362975 |
ExternalDocumentID | oai_doaj_org_article_d4bac6087b994d31b01ea3bad2a5de27 10_3389_fmicb_2024_1362975 38525081 |
Genre | Journal Article |
GroupedDBID | 53G 5VS 9T4 AAFWJ AAKDD ACGFO ACGFS ACXDI ADBBV ADRAZ AENEX AFPKN ALMA_UNASSIGNED_HOLDINGS AOIJS BAWUL BCNDV DIK ECGQY GROUPED_DOAJ GX1 HYE IAO IEA IHR IPNFZ ITC KQ8 M48 M~E NPM O5R O5S OK1 RIG RNS RPM AAYXX CITATION PGMZT 7X8 |
ID | FETCH-LOGICAL-c364t-d49832ce204f37d2a6fb11af1c53f788d3f3fb04315cc66dd937d25c6e4e88143 |
IEDL.DBID | M48 |
ISSN | 1664-302X |
IngestDate | Thu Jul 04 21:05:33 EDT 2024 Sat Aug 17 05:46:04 EDT 2024 Fri Aug 23 01:10:21 EDT 2024 Wed Mar 27 01:56:45 EDT 2024 |
IsDoiOpenAccess | true |
IsOpenAccess | true |
IsPeerReviewed | true |
IsScholarly | true |
Keywords | Antarctica moss banks peat microbial communities ornithogenic impact climate change |
Language | English |
License | Copyright © 2024 Prekrasna-Kviatkovska, Parnikoza, Yerkhova, Stelmakh, Pavlovska, Dzyndra, Yarovyi, and Dykyi. |
LinkModel | DirectLink |
MergedId | FETCHMERGED-LOGICAL-c364t-d49832ce204f37d2a6fb11af1c53f788d3f3fb04315cc66dd937d25c6e4e88143 |
Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
OpenAccessLink | https://doaj.org/article/d4bac6087b994d31b01ea3bad2a5de27 |
PMID | 38525081 |
PQID | 2985794546 |
PQPubID | 23479 |
PageCount | 1 |
ParticipantIDs | doaj_primary_oai_doaj_org_article_d4bac6087b994d31b01ea3bad2a5de27 proquest_miscellaneous_2985794546 crossref_primary_10_3389_fmicb_2024_1362975 pubmed_primary_38525081 |
PublicationCentury | 2000 |
PublicationDate | 2024-00-00 |
PublicationDateYYYYMMDD | 2024-01-01 |
PublicationDate_xml | – year: 2024 text: 2024-00-00 |
PublicationDecade | 2020 |
PublicationPlace | Switzerland |
PublicationPlace_xml | – name: Switzerland |
PublicationTitle | Frontiers in microbiology |
PublicationTitleAlternate | Front Microbiol |
PublicationYear | 2024 |
Publisher | Frontiers Media S.A |
Publisher_xml | – name: Frontiers Media S.A |
References | Quast (ref39) 2013; 41 Robinson (ref42) 2010; 26 Hellberg (ref21) 2019; 11 Wang (ref48) 2015; 6 Khangembam (ref25) 2017; 24 Apprill (ref3) 2017; 2 Emmerson (ref15) 2022; 28 Rice (ref9001) 2012 Kolton (ref27) 2022; 13 LaRue (ref29) 2013; 8 Lorrain (ref31) 2017; 7 Wierzgoń (ref50) 2023; 46 Edgar (ref14) 2011; 27 Wynn-Williams (ref51) 1996; 5 Crittenden (ref11) 2015; 122 Atkinson (ref5) 2004; 432 Kim (ref26) 2012; 50 Bromwich (ref8) 2013; 6 Gu (ref19) 2016; 32 Câmara (ref9) 2021; 25 Santamans (ref43) 2017; 12 Wickham (ref49) 2016 Poehlein (ref38) 2017; 67 Edgar (ref13) 2013; 10 Aislabie (ref1) 2009; 55 Kämpfer (ref23) 2020; 70 Dewar (ref12) 2013; 2 Yu (ref55) 2016; 43 Apprill (ref4) 2014; 9 Jiang (ref22) 2020; 86 Ramírez-Fernández (ref40) 2021; 788 Caporaso (ref10) 2010; 7 Parnikoza (ref37) 2018 Smith (ref45) 1999; 49 Lynch (ref32) 2012; 93 Grzesiak (ref18) 2020; 714 Zhu (ref56) 2009; 21 Guo (ref20) 2018; 9 Yergeau (ref52) 2012; 6 Korczak-Abshire (ref28) 2021; 17 Vaughan (ref47) 2003; 60 Magoč (ref33) 2011; 27 Teixeira (ref46) 2010; 4 Kämpfer (ref24) 2015; 65 Parnikoza (ref36) 2017; 86 Finneran (ref17) 2003; 53 Oshiki (ref35) 2018; 33 Lindeboom (ref30) 1984; 65 Younger (ref54) 2015; 15 Siddiqi (ref44) 2020; 113 Yergeau (ref53) 2008; 10 Riddick (ref41) 2016; 134 Björck (ref7) 1991; 23 Fenton (ref16) 1980; 68 Oksanen (ref34) 2016 Benjamini (ref6) 1995 Angnes (ref2) 2013; 140 |
References_xml | – volume: 28 start-page: 7234 year: 2022 ident: ref15 article-title: Environment-triggered demographic changes cascade and compound to propel a dramatic decline of an Antarctic seabird metapopulation publication-title: Glob. Chang. Biol. doi: 10.1111/gcb.16437 contributor: fullname: Emmerson – volume: 140 start-page: 368 year: 2013 ident: ref2 article-title: Correlating denitrifying catabolic genes with N2O and N2 emissions from swine slurry composting publication-title: Bioresour. Technol. doi: 10.1016/j.biortech.2013.04.112 contributor: fullname: Angnes – volume: 13 start-page: e03714 year: 2022 ident: ref27 article-title: Defining the Sphagnum Core microbiome across the north American continent reveals a central role for diazotrophic methanotrophs in the nitrogen and carbon cycles of boreal peatland ecosystems publication-title: MBio doi: 10.1128/mbio.03714-21 contributor: fullname: Kolton – volume: 8 start-page: e60568 year: 2013 ident: ref29 article-title: Climate change winners: receding ice fields facilitate colony expansion and altered dynamics in an Adélie penguin metapopulation publication-title: PLoS One doi: 10.1371/journal.pone.0060568 contributor: fullname: LaRue – volume: 134 start-page: 40 year: 2016 ident: ref41 article-title: Measurement of ammonia emissions from temperate and sub-polar seabird colonies publication-title: Atmos. Environ. doi: 10.1016/j.atmosenv.2016.03.016 contributor: fullname: Riddick – volume: 6 start-page: 1188 year: 2015 ident: ref48 article-title: Diversity and structure of soil bacterial communities in the Fildes region (maritime Antarctica) as revealed by 454 pyrosequencing publication-title: Front. Microbiol. doi: 10.3389/fmicb.2015.01188 contributor: fullname: Wang – volume: 65 start-page: 772 year: 2015 ident: ref24 article-title: Psychrobacter ciconiae sp. nov., isolated from white storks (Ciconia ciconia) publication-title: Int. J. Syst. Evol. Microbiol. doi: 10.1099/ijs.0.000013 contributor: fullname: Kämpfer – volume: 17 start-page: 20200708 year: 2021 ident: ref28 article-title: Coastal regions of the northern Antarctic peninsula are key for gentoo populations publication-title: Biol. Lett. doi: 10.1098/rsbl.2020.0708 contributor: fullname: Korczak-Abshire – volume: 46 start-page: 1235 year: 2023 ident: ref50 article-title: Moss bank composition on Galindez Island (Argentine islands, maritime Antarctic) publication-title: Polar Biol. doi: 10.1007/s00300-023-03197-7 contributor: fullname: Wierzgoń – start-page: 73 year: 2018 ident: ref37 article-title: Complex survey of the Argentine islands and Galindez Island (Maritime Antarctic) as a research area for studying the dynamics of terrestrial vegetation publication-title: Ukrainian Antarct. J. doi: 10.33275/1727-7485.1(17).2018.34 contributor: fullname: Parnikoza – volume-title: Ggplot2: Elegant graphics for data analysis year: 2016 ident: ref49 doi: 10.1007/978-3-319-24277-4 contributor: fullname: Wickham – volume: 4 start-page: 989 year: 2010 ident: ref46 article-title: Bacterial diversity in rhizosphere soil from Antarctic vascular plants of Admiralty Bay, maritime Antarctica publication-title: ISME J. doi: 10.1038/ismej.2010.35 contributor: fullname: Teixeira – volume: 6 start-page: 692 year: 2012 ident: ref52 article-title: Shifts in soil microorganisms in response to warming are consistent across a range of Antarctic environments publication-title: ISME J. doi: 10.1038/ismej.2011.124 contributor: fullname: Yergeau – year: 2016 ident: ref34 contributor: fullname: Oksanen – volume: 86 start-page: e01775 year: 2020 ident: ref22 article-title: Use of newly designed primers for quantification of complete ammonia-oxidizing (Comammox) bacterial clades and strict nitrite oxidizers in the genus Nitrospira publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.01775-20 contributor: fullname: Jiang – volume: 25 start-page: 369 year: 2021 ident: ref9 article-title: The largest moss carpet transplant in Antarctica and its bryosphere cryptic biodiversity publication-title: Extremophiles doi: 10.1007/s00792-021-01235-y contributor: fullname: Câmara – year: 2012 ident: ref9001 article-title: Standard methods for the examination of water and wastewater contributor: fullname: Rice – volume: 26 start-page: 139 year: 2010 ident: ref42 article-title: edgeR: a Bioconductor package for differential expression analysis of digital gene expression data publication-title: Bioinformatics doi: 10.1093/bioinformatics/btp616 contributor: fullname: Robinson – volume: 23 start-page: 361 year: 1991 ident: ref7 article-title: Stratigraphic and paleoclimatic studies of a 5500-year-old Moss Bank on Elephant Island, Antarctica publication-title: Arct. Alp. Res. doi: 10.2307/1551679 contributor: fullname: Björck – year: 1995 ident: ref6 article-title: Controlling the false discovery rate: A practical and powerful approach to multiple testing publication-title: J. R. Stat. Soc. Ser. B doi: 10.1111/j.2517-6161.1995.tb02031.x contributor: fullname: Benjamini – volume: 49 start-page: 393 year: 1999 ident: ref45 article-title: Marine ecosystem sensitivity to climate change: historical observations and paleoecological records reveal ecological transitions in the Antarctic peninsula region publication-title: Bioscience doi: 10.2307/1313632 contributor: fullname: Smith – volume: 24 start-page: 215 year: 2017 ident: ref25 article-title: Diversity and abundance of ammonia-oxidizing bacteria and archaea in a freshwater recirculating aquaculture system publication-title: Hayati J. Biosci. doi: 10.1016/j.hjb.2017.11.003 contributor: fullname: Khangembam – volume: 7 start-page: 3721 year: 2017 ident: ref31 article-title: Seabirds supply nitrogen to reef-building corals on remote Pacific islets publication-title: Sci. Rep. doi: 10.1038/s41598-017-03781-y contributor: fullname: Lorrain – volume: 9 start-page: e90785 year: 2014 ident: ref4 article-title: Humpback whale populations share a Core skin bacterial community: towards a health index for marine mammals? publication-title: PLoS One doi: 10.1371/journal.pone.0090785 contributor: fullname: Apprill – volume: 86 start-page: 83 year: 2017 ident: ref36 article-title: Soils of the Argentine islands, Antarctica: diversity and characteristics publication-title: Polarforschung doi: 10.2312/polarforschung.86.2.83 contributor: fullname: Parnikoza – volume: 60 start-page: 243 year: 2003 ident: ref47 article-title: Recent rapid regional climate warming on the Antarctic peninsula publication-title: Clim. Chang. doi: 10.1023/A:1026021217991 contributor: fullname: Vaughan – volume: 9 start-page: 552 year: 2018 ident: ref20 article-title: Direct and indirect effects of penguin Feces on microbiomes in Antarctic Ornithogenic soils publication-title: Front. Microbiol. doi: 10.3389/fmicb.2018.00552 contributor: fullname: Guo – volume: 12 start-page: e0181901 year: 2017 ident: ref43 article-title: Soil features in rookeries of Antarctic penguins reveal sea to land biotransport of chemical pollutants publication-title: PLoS One doi: 10.1371/journal.pone.0181901 contributor: fullname: Santamans – volume: 5 start-page: 1271 year: 1996 ident: ref51 article-title: Antarctic microbial diversity: the basis of polar ecosystem processes publication-title: Biodivers. Conserv. doi: 10.1007/BF00051979 contributor: fullname: Wynn-Williams – volume: 33 start-page: 230 year: 2018 ident: ref35 article-title: Ureolytic prokaryotes in soil: community abundance and diversity publication-title: Microbes Environ. doi: 10.1264/jsme2.ME17188 contributor: fullname: Oshiki – volume: 27 start-page: 2194 year: 2011 ident: ref14 article-title: UCHIME improves sensitivity and speed of chimera detection publication-title: Bioinformatics doi: 10.1093/bioinformatics/btr381 contributor: fullname: Edgar – volume: 55 start-page: 21 year: 2009 ident: ref1 article-title: Bacterial diversity associated with ornithogenic soil of the Ross Sea region, Antarctica publication-title: Can. J. Microbiol. doi: 10.1139/W08-126 contributor: fullname: Aislabie – volume: 113 start-page: 331 year: 2020 ident: ref44 article-title: Simplicispira hankyongi sp. nov., a novel denitrifying bacterium isolated from sludge publication-title: Antonie Van Leeuwenhoek doi: 10.1007/s10482-019-01341-0 contributor: fullname: Siddiqi – volume: 432 start-page: 100 year: 2004 ident: ref5 article-title: Long-term decline in krill stock and increase in salps within the Southern Ocean publication-title: Nature doi: 10.1038/nature02996 contributor: fullname: Atkinson – volume: 70 start-page: 211 year: 2020 ident: ref23 article-title: Psychrobacter pygoscelis sp. nov. isolated from the penguin Pygoscelis papua publication-title: Int. J. Syst. Evol. Microbiol. doi: 10.1099/ijsem.0.003739 contributor: fullname: Kämpfer – volume: 32 start-page: 2847 year: 2016 ident: ref19 article-title: Complex heatmaps reveal patterns and correlations in multidimensional genomic data publication-title: Bioinformatics doi: 10.1093/bioinformatics/btw313 contributor: fullname: Gu – volume: 788 start-page: 147693 year: 2021 ident: ref40 article-title: Diversity of microbial communities and genes involved in nitrous oxide emissions in Antarctic soils impacted by marine animals as revealed by metagenomics and 100 metagenome-assembled genomes publication-title: Sci. Total Environ. doi: 10.1016/j.scitotenv.2021.147693 contributor: fullname: Ramírez-Fernández – volume: 93 start-page: 1367 year: 2012 ident: ref32 article-title: Spatially integrated assessment reveals widespread changes in penguin populations on the Antarctic peninsula publication-title: Ecology doi: 10.1890/11-1588.1 contributor: fullname: Lynch – volume: 2 start-page: 2 year: 2017 ident: ref3 article-title: Extensive Core microbiome in drone-captured whale blow supports a framework for health monitoring publication-title: mSystems doi: 10.1128/mSystems.00119-17 contributor: fullname: Apprill – volume: 6 start-page: 139 year: 2013 ident: ref8 article-title: Central West Antarctica among the most rapidly warming regions on earth publication-title: Nat. Geosci. doi: 10.1038/ngeo1671 contributor: fullname: Bromwich – volume: 41 start-page: D590 year: 2013 ident: ref39 article-title: The SILVA ribosomal RNA gene database project: improved data processing and web-based tools publication-title: Nucleic Acids Res. doi: 10.1093/nar/gks1219 contributor: fullname: Quast – volume: 2 start-page: 195 year: 2013 ident: ref12 article-title: Interspecific variations in the gastrointestinal microbiota in penguins publication-title: Microbiology doi: 10.1002/mbo3.66 contributor: fullname: Dewar – volume: 43 start-page: 7186 year: 2016 ident: ref55 article-title: Transformations of landscape and peat-forming ecosystems in response to late Holocene climate change in the western Antarctic peninsula publication-title: Geophys. Res. Lett. doi: 10.1002/2016GL069380 contributor: fullname: Yu – volume: 53 start-page: 669 year: 2003 ident: ref17 article-title: Rhodoferax ferrireducens sp. nov., a psychrotolerant, facultatively anaerobic bacterium that oxidizes acetate with the reduction of Fe(III) publication-title: Int. J. Syst. Evol. Microbiol. doi: 10.1099/ijs.0.02298-0 contributor: fullname: Finneran – volume: 11 start-page: 3165 year: 2019 ident: ref21 article-title: Population expansion of an Antarctic king crab? publication-title: Front. Biogeogr. doi: 10.21425/F5FBG43165 contributor: fullname: Hellberg – volume: 21 start-page: 427 year: 2009 ident: ref56 article-title: Nutrient compositions and potential greenhouse gas production in penguin guano, ornithogenic soils and seal colony soils in coastal Antarctica publication-title: Antarct. Sci. doi: 10.1017/S0954102009990204 contributor: fullname: Zhu – volume: 67 start-page: 2711 year: 2017 ident: ref38 article-title: Proposal for the reclassification of obligately purine-fermenting bacteria Clostridium acidurici (Barker 1938) and Clostridium purinilyticum (Dürre et al. 1981) as Gottschalkia acidurici gen. nov. comb. nov. and Gottschalkiapurinilytica comb. nov. and of Eubacterium angustum (Beuscher and Andreesen 1985) as Andreesenia angusta gen. nov. comb. nov. in the family Gottschalkiaceae fam. nov publication-title: Int. J. Syst. Evol. Microbiol. doi: 10.1099/ijsem.0.002008 contributor: fullname: Poehlein – volume: 15 start-page: 236 year: 2015 ident: ref54 article-title: Proliferation of East Antarctic Adélie penguins in response to historical deglaciation publication-title: BMC Evol. Biol. doi: 10.1186/s12862-015-0502-2 contributor: fullname: Younger – volume: 122 start-page: 295 year: 2015 ident: ref11 article-title: Lichen response to ammonia deposition defines the footprint of a penguin rookery publication-title: Biogeochemistry doi: 10.1007/s10533-014-0042-7 contributor: fullname: Crittenden – volume: 7 start-page: 335 year: 2010 ident: ref10 article-title: QIIME allows analysis of high-throughput community sequencing data publication-title: Nat. Methods doi: 10.1038/nmeth.f.303 contributor: fullname: Caporaso – volume: 714 start-page: 136714 year: 2020 ident: ref18 article-title: A smelly business: microbiology of Adélie penguin guano (point Thomas rookery, Antarctica) publication-title: Sci. Total Environ. doi: 10.1016/j.scitotenv.2020.136714 contributor: fullname: Grzesiak – volume: 10 start-page: 2223 year: 2008 ident: ref53 article-title: Responses of Antarctic soil microbial communities and associated functions to temperature and freeze–thaw cycle frequency publication-title: Environ. Microbiol. doi: 10.1111/j.1462-2920.2008.01644.x contributor: fullname: Yergeau – volume: 68 start-page: 211 year: 1980 ident: ref16 article-title: The rate of peat accumulation in Antarctic Moss banks publication-title: J. Ecol. doi: 10.2307/2259252 contributor: fullname: Fenton – volume: 10 start-page: 996 year: 2013 ident: ref13 article-title: UPARSE: highly accurate OTU sequences from microbial amplicon reads publication-title: Nat. Methods doi: 10.1038/nmeth.2604 contributor: fullname: Edgar – volume: 50 start-page: 1081 year: 2012 ident: ref26 article-title: Bacterial diversity in ornithogenic soils compared to mineral soils on King George Island, Antarctica publication-title: J. Microbiol. doi: 10.1007/s12275-012-2655-7 contributor: fullname: Kim – volume: 27 start-page: 2957 year: 2011 ident: ref33 article-title: FLASH: fast length adjustment of short reads to improve genome assemblies publication-title: Bioinformatics doi: 10.1093/bioinformatics/btr507 contributor: fullname: Magoč – volume: 65 start-page: 269 year: 1984 ident: ref30 article-title: The nitrogen pathway in a penguin rookery publication-title: Ecology doi: 10.2307/1939479 contributor: fullname: Lindeboom |
SSID | ssj0000402000 |
Score | 2.4051116 |
Snippet | The study explores the indirect impact of climate change driven by gentoo's penguin colonization pressure on the microbial communities of moss banks formed by... Introduction The study explores the indirect impact of climate change driven by gentoo’s penguin colonization pressure on the microbial communities of moss... IntroductionThe study explores the indirect impact of climate change driven by gentoo's penguin colonization pressure on the microbial communities of moss... IntroductionThe study explores the indirect impact of climate change driven by gentoo’s penguin colonization pressure on the microbial communities of moss... |
SourceID | doaj proquest crossref pubmed |
SourceType | Open Website Aggregation Database Index Database |
StartPage | 1362975 |
SubjectTerms | Antarctica climate change moss banks ornithogenic impact peat microbial communities |
SummonAdditionalLinks | – databaseName: DOAJ Directory of Open Access Journals dbid: DOA link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV1La9wwEBYlUMgl9JHHJk1RILdiYlkP2701pUsIJKcs5Cb0TE1Ye8l6D_vvMyPthvQQcunVCEn-Ro_5JM03hJx7zGoVyrYwrXKF4KYuTPAMWEqQuGPzOikx3dyqq5m4vpf3r1J94ZuwLA-cgbvwwhqnyqa2bSs8Z7ZkwXBrfGWkD1WOI2fyFZlKazDSorLMUTLAwlowU-cs8MFK4MsujCf9ZydKgv1ve5lpt5l-InsbN5H-yt37TD6E_gv5mBNHrr-Sh-nTMKfGdX5Y4ImIo-NAMcJq_DvAiOjcTzrvksQSVOJyDMi4pj6nn1_Srqdz6BO1pn9c0nRjHjy1a4qBVsNAF6F_WHX9cp_Mpn_ufl8Vm5QJheNKjIUXLUxRF6pSRF4DRipaxkxkTvIIbNfzyKNFQR3pnFLet1hKOhVEaBrwnQ7ITj_04YhQGbmLjRFMGOCQUHH0Nopoa8MraUI5IT-28OlFVsbQwCgQbJ3A1gi23oA9IZeI8EtJVLVOH8DWemNr_Z6tJ-Rsax8NswCvNkwfhtVSV20jYWWRQk3IYTbcS1O8wavbhh3_jy6ckF38rXwI843sjE-rcApuyWi_pxH4DPbO4cE priority: 102 providerName: Directory of Open Access Journals |
Title | From acidophilic to ornithogenic: microbial community dynamics in moss banks altered by gentoo penguins |
URI | https://www.ncbi.nlm.nih.gov/pubmed/38525081 https://search.proquest.com/docview/2985794546 https://doaj.org/article/d4bac6087b994d31b01ea3bad2a5de27 |
Volume | 15 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV3da9RAEF9qRfBF6ve1WlbwTSLZ7EcSoRQVzyLUJw_ubdnPM9RL6iUHvf_emU2uINgHXwIJy2bzm53d-e1kZgh567GqVcjrzNTKZYKbMjPBM2ApQeKOzcuUienyu7pYiG9LuTwg-3JHE4D9P6kd1pNabH69v_m9OweFP0PGCfstSKBxFqheIfCnLQwVvUfuF4ILnPGXk7mfVmYkSykqhSmFDoFiOcbR3NHNX3tVSul_tx2a9qP5EXk0GZL04yj5x-QgtE_Ig7G05O4pWc033Zoa1_juGs9MHB06ijFYw88O5kzjPtB1k5IwQSdujBIZdtSPBep72rR0DWOi1rRXPU0-9eCp3VEMxeo6CiCttk3bPyOL-Zcfny-yqahC5rgSQ-ZFDUrsQpGLyEtfGBUtYyYyJ3kEPux55NFiyh3pnFLe19hKOhVEqCqwrp6Tw7Zrw0tCZeQuVkYwYYBlQsfR2yiiLQ0vpAn5jLzbw6evx9wZGjgHgq0T2BrB1hPYM_IJEb5tiXmv04Nus9KTGmkvrHEqr0pb18JzZnMWDLcGvkP6UJQz8mYvHw16gs4P04Zu2-uiriSsPVKoGXkxCu72VbxC527Fjv9rwCfkId6O5zGvyOGw2YbXYKEM9jQxe7h-XbLTNAX_ABhH5IE |
link.rule.ids | 315,786,790,870,2115,4043,24346,27956,27957,27958 |
linkProvider | Scholars Portal |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=From+acidophilic+to+ornithogenic%3A+microbial+community+dynamics+in+moss+banks+altered+by+gentoo+penguins&rft.jtitle=Frontiers+in+microbiology&rft.au=Prekrasna-Kviatkovska%2C+Yevheniia&rft.au=Parnikoza%2C+Ivan&rft.au=Yerkhova%2C+Anna&rft.au=Stelmakh%2C+Olesia&rft.date=2024&rft.issn=1664-302X&rft.eissn=1664-302X&rft.volume=15&rft_id=info:doi/10.3389%2Ffmicb.2024.1362975&rft.externalDBID=n%2Fa&rft.externalDocID=10_3389_fmicb_2024_1362975 |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1664-302X&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1664-302X&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1664-302X&client=summon |