Capnocytophaga catalasegens sp. nov., isolated from feline oral cavities
Three bacterial strains, KC07075, KC07079 and KC07084 T , were isolated from the oral cavity of cats in 2007 in Japan. These strains were Gram-negative rods, exhibited gliding motility, grew in air with 5 % CO 2 , and showed oxidase activity, but not catalase activity. The 16S rRNA gene sequences of...
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Published in | International journal of systematic and evolutionary microbiology Vol. 73; no. 3 |
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Main Authors | , , , , |
Format | Journal Article |
Language | English |
Published |
England
23.03.2023
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Abstract | Three bacterial strains, KC07075, KC07079 and KC07084
T
, were isolated from the oral cavity of cats in 2007 in Japan. These strains were Gram-negative rods, exhibited gliding motility, grew in air with 5 % CO
2
, and showed oxidase activity, but not catalase activity. The 16S rRNA gene sequences of the three strains were 100 % identical. The 16S rRNA gene sequence of strain KC07084
T
showed 92.1 and 91.9% identity to the type strains of
Capnocytophaga canis
and
Capnocytophaga felis
, respectively, and showed 89.3–91.6% identity to other
Capnocytophaga
species. The major cellular fatty acids of strain KC07084
T
were iso-C
15 : 0
(58.4 %) and summed feature 11 (13.1 %). The G+C content of DNA from strain KC07084
T
was 33.7 mol%, and the genome size was 2.92 Mbp. Strains KC07075, KC07079 and KC07084
T
showed digital DNA–DNA hybridization values (dDDH) values of 99.9 % and average nucleotide identity (ANI) values of 99.98 % with each other, strain KC07084
T
had dDDH values of 18.7–28.2 % and ANI values of 67.12–72.30 % to the type strains of other
Capnocytophaga
species. All known species of the genus
Capnocytophaga
inhabiting the oral cavity of dogs and cats have catalase activity, but the three strains, including type strain KC07084
T
, lacked catalase activity. These results of the phylogenetic analysis of the 16S rRNA gene sequence, biochemical characteristics, and dDDH and ANI values suggest that strain KC07084
T
represents a novel species. We propose the name
Capnocytophaga catalasegens
sp. nov., with KC07084
T
as the type strain (=JCM 32682
T
=DSM 107252
T
). |
---|---|
AbstractList | Three bacterial strains, KC07075, KC07079 and KC07084T, were isolated from the oral cavity of cats in 2007 in Japan. These strains were Gram-negative rods, exhibited gliding motility, grew in air with 5 % CO2, and showed oxidase activity, but not catalase activity. The 16S rRNA gene sequences of the three strains were 100 % identical. The 16S rRNA gene sequence of strain KC07084T showed 92.1 and 91.9% identity to the type strains of Capnocytophaga canis and Capnocytophaga felis, respectively, and showed 89.3-91.6% identity to other Capnocytophaga species. The major cellular fatty acids of strain KC07084T were iso-C15 : 0 (58.4 %) and summed feature 11 (13.1 %). The G+C content of DNA from strain KC07084T was 33.7 mol%, and the genome size was 2.92 Mbp. Strains KC07075, KC07079 and KC07084T showed digital DNA-DNA hybridization values (dDDH) values of 99.9 % and average nucleotide identity (ANI) values of 99.98 % with each other, strain KC07084T had dDDH values of 18.7-28.2 % and ANI values of 67.12-72.30 % to the type strains of other Capnocytophaga species. All known species of the genus Capnocytophaga inhabiting the oral cavity of dogs and cats have catalase activity, but the three strains, including type strain KC07084T, lacked catalase activity. These results of the phylogenetic analysis of the 16S rRNA gene sequence, biochemical characteristics, and dDDH and ANI values suggest that strain KC07084T represents a novel species. We propose the name Capnocytophaga catalasegens sp. nov., with KC07084T as the type strain (=JCM 32682T=DSM 107252T).Three bacterial strains, KC07075, KC07079 and KC07084T, were isolated from the oral cavity of cats in 2007 in Japan. These strains were Gram-negative rods, exhibited gliding motility, grew in air with 5 % CO2, and showed oxidase activity, but not catalase activity. The 16S rRNA gene sequences of the three strains were 100 % identical. The 16S rRNA gene sequence of strain KC07084T showed 92.1 and 91.9% identity to the type strains of Capnocytophaga canis and Capnocytophaga felis, respectively, and showed 89.3-91.6% identity to other Capnocytophaga species. The major cellular fatty acids of strain KC07084T were iso-C15 : 0 (58.4 %) and summed feature 11 (13.1 %). The G+C content of DNA from strain KC07084T was 33.7 mol%, and the genome size was 2.92 Mbp. Strains KC07075, KC07079 and KC07084T showed digital DNA-DNA hybridization values (dDDH) values of 99.9 % and average nucleotide identity (ANI) values of 99.98 % with each other, strain KC07084T had dDDH values of 18.7-28.2 % and ANI values of 67.12-72.30 % to the type strains of other Capnocytophaga species. All known species of the genus Capnocytophaga inhabiting the oral cavity of dogs and cats have catalase activity, but the three strains, including type strain KC07084T, lacked catalase activity. These results of the phylogenetic analysis of the 16S rRNA gene sequence, biochemical characteristics, and dDDH and ANI values suggest that strain KC07084T represents a novel species. We propose the name Capnocytophaga catalasegens sp. nov., with KC07084T as the type strain (=JCM 32682T=DSM 107252T). Three bacterial strains, KC07075, KC07079 and KC07084 T , were isolated from the oral cavity of cats in 2007 in Japan. These strains were Gram-negative rods, exhibited gliding motility, grew in air with 5 % CO 2 , and showed oxidase activity, but not catalase activity. The 16S rRNA gene sequences of the three strains were 100 % identical. The 16S rRNA gene sequence of strain KC07084 T showed 92.1 and 91.9% identity to the type strains of Capnocytophaga canis and Capnocytophaga felis , respectively, and showed 89.3–91.6% identity to other Capnocytophaga species. The major cellular fatty acids of strain KC07084 T were iso-C 15 : 0 (58.4 %) and summed feature 11 (13.1 %). The G+C content of DNA from strain KC07084 T was 33.7 mol%, and the genome size was 2.92 Mbp. Strains KC07075, KC07079 and KC07084 T showed digital DNA–DNA hybridization values (dDDH) values of 99.9 % and average nucleotide identity (ANI) values of 99.98 % with each other, strain KC07084 T had dDDH values of 18.7–28.2 % and ANI values of 67.12–72.30 % to the type strains of other Capnocytophaga species. All known species of the genus Capnocytophaga inhabiting the oral cavity of dogs and cats have catalase activity, but the three strains, including type strain KC07084 T , lacked catalase activity. These results of the phylogenetic analysis of the 16S rRNA gene sequence, biochemical characteristics, and dDDH and ANI values suggest that strain KC07084 T represents a novel species. We propose the name Capnocytophaga catalasegens sp. nov., with KC07084 T as the type strain (=JCM 32682 T =DSM 107252 T ). Three bacterial strains, KC07075, KC07079 and KC07084 , were isolated from the oral cavity of cats in 2007 in Japan. These strains were Gram-negative rods, exhibited gliding motility, grew in air with 5 % CO , and showed oxidase activity, but not catalase activity. The 16S rRNA gene sequences of the three strains were 100 % identical. The 16S rRNA gene sequence of strain KC07084 showed 92.1 and 91.9% identity to the type strains of and , respectively, and showed 89.3-91.6% identity to other species. The major cellular fatty acids of strain KC07084 were iso-C (58.4 %) and summed feature 11 (13.1 %). The G+C content of DNA from strain KC07084 was 33.7 mol%, and the genome size was 2.92 Mbp. Strains KC07075, KC07079 and KC07084 showed digital DNA-DNA hybridization values (dDDH) values of 99.9 % and average nucleotide identity (ANI) values of 99.98 % with each other, strain KC07084 had dDDH values of 18.7-28.2 % and ANI values of 67.12-72.30 % to the type strains of other species. All known species of the genus inhabiting the oral cavity of dogs and cats have catalase activity, but the three strains, including type strain KC07084 , lacked catalase activity. These results of the phylogenetic analysis of the 16S rRNA gene sequence, biochemical characteristics, and dDDH and ANI values suggest that strain KC07084 represents a novel species. We propose the name sp. nov., with KC07084 as the type strain (=JCM 32682 =DSM 107252 ). |
Author | Morikawa, Shigeru Suzuki, Michio Kimura, Masanobu Imaoka, Koichi Maeda, Ken |
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Cites_doi | 10.1093/bioinformatics/btx324 10.1128/jcm.27.2.231-235.1989 10.1007/BF00408040 10.1038/s41467-019-10210-3 10.1128/genomeA.01186-17 10.1093/oxfordjournals.molbev.a040454 10.1093/ofid/ofab175 10.1099/00207713-44-2-324 10.1099/ijsem.0.004176 10.1016/j.vetmic.2009.01.040 10.1093/molbev/msv150 10.1073/pnas.0404206101 10.1038/emi.2015.48 10.1111/1348-0421.12642 10.1186/1471-2105-14-60 10.3390/pathogens10050547 10.1093/molbev/msab120 10.1111/j.1558-5646.1985.tb00420.x 10.1093/nar/gkz926 10.1099/ijs.0.65373-0 10.1093/bioinformatics/btx713 10.1016/j.vetmic.2010.01.001 10.1086/282802 10.1007/s10096-015-2360-7 10.1099/ijsem.0.004979 10.1093/bioinformatics/btv681 10.1038/srep22919 |
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References | R21 R20 R23 R22 R25 R24 R27 R29 R28 R1 R2 R3 R4 R5 R6 Lane (R13) 1991 R7 R8 Sasser (R26) 1990 R9 R10 R12 R11 R14 R16 R15 R18 R17 R19 |
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Snippet | Three bacterial strains, KC07075, KC07079 and KC07084
T
, were isolated from the oral cavity of cats in 2007 in Japan. These strains were Gram-negative rods,... Three bacterial strains, KC07075, KC07079 and KC07084 , were isolated from the oral cavity of cats in 2007 in Japan. These strains were Gram-negative rods,... Three bacterial strains, KC07075, KC07079 and KC07084T, were isolated from the oral cavity of cats in 2007 in Japan. These strains were Gram-negative rods,... |
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SubjectTerms | Animals Bacterial Typing Techniques Base Composition Capnocytophaga Cat Diseases Cats DNA, Bacterial - genetics Dog Diseases Dogs Fatty Acids - chemistry Mouth Nucleic Acid Hybridization Phylogeny RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA |
Title | Capnocytophaga catalasegens sp. nov., isolated from feline oral cavities |
URI | https://www.ncbi.nlm.nih.gov/pubmed/36951910 https://www.proquest.com/docview/2790050042 |
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