Draft Genome Sequences of a Phylogenetically Diverse Suite of Pseudomonas syringae Strains from Multiple Source Populations

Here, we report the draft genome sequences for 7 phylogenetically diverse isolates of Pseudomonas syringae, obtained from numerous environmental sources and geographically proximate crop species. Overall, these sequences provide a wealth of information about the differences (or lack thereof) between...

Full description

Saved in:
Bibliographic Details
Published inGenome announcements (Washington, DC) Vol. 2; no. 1; pp. e01195 - 13
Main Authors Baltrus, David A, Yourstone, Scott, Lind, Abigail, Guilbaud, Caroline, Sands, David C, Jones, Corbin D, Morris, Cindy E, Dangl, Jeffrey L
Format Journal Article
LanguageEnglish
Published United States American Society for Microbiology 23.01.2014
Subjects
Agricultural sciences
Biodiversity and Ecology
Environmental Sciences
Life Sciences
Prokaryotes
pseudomonas syringae
bactérie saprophyte
phytopathogenic bacteria
bactérie phytopathogène
relation habitat population
séquençage du génome complet
Online AccessGet full text

Cover

Abstract Here, we report the draft genome sequences for 7 phylogenetically diverse isolates of Pseudomonas syringae, obtained from numerous environmental sources and geographically proximate crop species. Overall, these sequences provide a wealth of information about the differences (or lack thereof) between isolates from disease outbreaks and those from other sources.
AbstractList ABSTRACT Here, we report the draft genome sequences for 7 phylogenetically diverse isolates of Pseudomonas syringae , obtained from numerous environmental sources and geographically proximate crop species. Overall, these sequences provide a wealth of information about the differences (or lack thereof) between isolates from disease outbreaks and those from other sources.
Here, we report the draft genome sequences for 7 phylogenetically diverse isolates of Pseudomonas syringae , obtained from numerous environmental sources and geographically proximate crop species. Overall, these sequences provide a wealth of information about the differences (or lack thereof) between isolates from disease outbreaks and those from other sources.
Here, we report the draft genome sequences for 7 phylogenetically diverse isolates of Pseudomonas syringae, obtained from numerous environmental sources and geographically proximate crop species. Overall, these sequences provide a wealth of information about the differences (or lack thereof) between isolates from disease outbreaks and those from other sources.
Author Jones, Corbin D
Lind, Abigail
Yourstone, Scott
Sands, David C
Baltrus, David A
Guilbaud, Caroline
Dangl, Jeffrey L
Morris, Cindy E
Author_xml – sequence: 1
  givenname: David A
  surname: Baltrus
  fullname: Baltrus, David A
  organization: School of Plant Sciences, University of Arizona, Tucson, Arizona, USA
– sequence: 2
  givenname: Scott
  surname: Yourstone
  fullname: Yourstone, Scott
– sequence: 3
  givenname: Abigail
  surname: Lind
  fullname: Lind, Abigail
– sequence: 4
  givenname: Caroline
  surname: Guilbaud
  fullname: Guilbaud, Caroline
– sequence: 5
  givenname: David C
  surname: Sands
  fullname: Sands, David C
– sequence: 6
  givenname: Corbin D
  surname: Jones
  fullname: Jones, Corbin D
– sequence: 7
  givenname: Cindy E
  surname: Morris
  fullname: Morris, Cindy E
– sequence: 8
  givenname: Jeffrey L
  surname: Dangl
  fullname: Dangl, Jeffrey L
BackLink https://www.ncbi.nlm.nih.gov/pubmed/24459267$$D View this record in MEDLINE/PubMed
https://hal.science/hal-01605350$$DView record in HAL
BookMark eNpdUcFuGyEURFWqJk1z76ni2B42hWWXhUslK0mTSq5qqckZsfhhU7Hgwq4lqz8fHLtRWi6geTPzHm_eopMQAyD0npJLSmvxeQUhDjC7JJTKtqLsFTqrKZeVqEV38uJ9ii5y_kXKEQVqxBt0WjdNK2venaE_10nbEd8-eeGf8HuCYCDjaLHGi_XOx9IGRme09zt87baQcuFNboQ9Z5FhWsYhBp1x3iUXVrpUx6RdyNimOODvkx_dxhc0TskAXsTN5PXoYsjv0GurfYaL432OHr7e3F_dVfMft9-uZvPKME7GSnbEaEnBaMGNNT3pe06N7YShol_KuuG9WJKm7Tixfd1YaTVn0LNSID2THTtHXw6-m6kfYGkglAG92iQ36LRTUTv1byW4tVrFrWKy7EzKYvDpYLD-T3Y3m6s9RignLWvJlhbux2OzFMsy86gGlw14rwPEKSvayLojgndNoZID1aSYcwL77E2J2kesjhGrp4gVZUXy4eVXngV_A2WP_5qoEA
CitedBy_id crossref_primary_10_3389_fmicb_2022_804681
crossref_primary_10_24057_2071_9388_2022_061
crossref_primary_10_3389_fmicb_2017_02422
crossref_primary_10_1094_PHYTO_06_21_0269_R
crossref_primary_10_1111_mpp_12506
crossref_primary_10_1134_S000143382108003X
crossref_primary_10_1186_s12864_019_5555_y
crossref_primary_10_1094_PHYTO_07_19_0266_R
crossref_primary_10_1111_mpp_12423
crossref_primary_10_1111_nph_15182
Cites_doi 10.1089/cmb.2012.0021
10.1094/PHYTO.2000.90.6.636
10.1128/mBio.00107-10
10.1371/journal.ppat.1002132
10.1038/ismej.2007.113
10.1038/ismej.2011.202
10.1146/annurev-phyto-072910-095242
ContentType Journal Article
Copyright Distributed under a Creative Commons Attribution 4.0 International License
Copyright © 2014 Baltrus et al. 2014 Baltrus et al.
Copyright_xml – notice: Distributed under a Creative Commons Attribution 4.0 International License
– notice: Copyright © 2014 Baltrus et al. 2014 Baltrus et al.
DBID NPM
AAYXX
CITATION
7X8
1XC
VOOES
5PM
DOI 10.1128/genomeA.01195-13
DatabaseName PubMed
CrossRef
MEDLINE - Academic
Hyper Article en Ligne (HAL)
Hyper Article en Ligne (HAL) (Open Access)
PubMed Central (Full Participant titles)
DatabaseTitle PubMed
CrossRef
MEDLINE - Academic
DatabaseTitleList CrossRef

PubMed
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
DeliveryMethod fulltext_linktorsrc
Discipline Biology
Environmental Sciences
EISSN 2169-8287
EndPage 13
ExternalDocumentID oai_HAL_hal_01605350v1
10_1128_genomeA_01195_13
24459267
Genre Journal Article
GrantInformation_xml – fundername: NIGMS NIH HHS
  grantid: F32 GM082279
– fundername: NIGMS NIH HHS
  grantid: R01 GM066025
GroupedDBID 0R~
53G
5VS
AAUOK
ADBBV
ADRAZ
ALMA_UNASSIGNED_HOLDINGS
AOIJS
BAWUL
BTFSW
DIK
EBS
EJD
H13
HYE
KQ8
M48
M~E
NPM
O9-
OK1
PGMZT
RHF
RHI
RPM
RSF
AAYXX
CITATION
7X8
1XC
3V.
BENPR
BPHCQ
BVXVI
PIMPY
PQQKQ
PROAC
VOOES
5PM
ID FETCH-LOGICAL-c360t-970ca91eca86cfcb0bb61cf78c18bd9246b8d045760fb24f9fa63eb32460b3973
IEDL.DBID RPM
ISSN 2169-8287
IngestDate Tue Sep 17 21:18:34 EDT 2024
Tue Oct 15 15:36:53 EDT 2024
Fri Oct 25 06:08:58 EDT 2024
Fri Aug 23 03:09:47 EDT 2024
Sat Sep 28 07:59:20 EDT 2024
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 1
Keywords pseudomonas syringae
bactérie saprophyte
phytopathogenic bacteria
bactérie phytopathogène
relation habitat population
séquençage du génome complet
Language English
License Distributed under a Creative Commons Attribution 4.0 International License: http://creativecommons.org/licenses/by/4.0
This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c360t-970ca91eca86cfcb0bb61cf78c18bd9246b8d045760fb24f9fa63eb32460b3973
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ORCID 0000-0002-9135-1812
OpenAccessLink https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3900899/
PMID 24459267
PQID 1492708674
PQPubID 23479
ParticipantIDs pubmedcentral_primary_oai_pubmedcentral_nih_gov_3900899
hal_primary_oai_HAL_hal_01605350v1
proquest_miscellaneous_1492708674
crossref_primary_10_1128_genomeA_01195_13
pubmed_primary_24459267
PublicationCentury 2000
PublicationDate 20140123
PublicationDateYYYYMMDD 2014-01-23
PublicationDate_xml – month: 1
  year: 2014
  text: 20140123
  day: 23
PublicationDecade 2010
PublicationPlace United States
PublicationPlace_xml – name: United States
– name: 1752 N St., N.W., Washington, DC
PublicationTitle Genome announcements (Washington, DC)
PublicationTitleAlternate Genome Announc
PublicationYear 2014
Publisher American Society for Microbiology
Publisher_xml – name: American Society for Microbiology
References 22237542 - ISME J. 2012 Jul;6(7):1325-35
18944544 - Phytopathology. 2000 Jun;90(6):636-46
22506599 - J Comput Biol. 2012 May;19(5):455-77
18185595 - ISME J. 2008 Mar;2(3):321-34
21799664 - PLoS Pathog. 2011 Jul;7(7):e1002132
21568703 - Annu Rev Phytopathol. 2011;49:269-89
20802828 - MBio. 2010 Jun 29;1(3):null
e_1_3_2_8_2
e_1_3_2_7_2
e_1_3_2_6_2
e_1_3_2_5_2
e_1_3_2_4_2
e_1_3_2_3_2
e_1_3_2_2_2
References_xml – ident: e_1_3_2_8_2
  doi: 10.1089/cmb.2012.0021
– ident: e_1_3_2_6_2
  doi: 10.1094/PHYTO.2000.90.6.636
– ident: e_1_3_2_5_2
  doi: 10.1128/mBio.00107-10
– ident: e_1_3_2_7_2
  doi: 10.1371/journal.ppat.1002132
– ident: e_1_3_2_4_2
  doi: 10.1038/ismej.2007.113
– ident: e_1_3_2_3_2
  doi: 10.1038/ismej.2011.202
– ident: e_1_3_2_2_2
  doi: 10.1146/annurev-phyto-072910-095242
SSID ssj0000816948
Score 2.0164263
Snippet Here, we report the draft genome sequences for 7 phylogenetically diverse isolates of Pseudomonas syringae, obtained from numerous environmental sources and...
ABSTRACT Here, we report the draft genome sequences for 7 phylogenetically diverse isolates of Pseudomonas syringae , obtained from numerous environmental...
Here, we report the draft genome sequences for 7 phylogenetically diverse isolates of Pseudomonas syringae , obtained from numerous environmental sources and...
SourceID pubmedcentral
hal
proquest
crossref
pubmed
SourceType Open Access Repository
Aggregation Database
Index Database
StartPage e01195
SubjectTerms Agricultural sciences
Biodiversity and Ecology
Environmental Sciences
Life Sciences
Prokaryotes
SummonAdditionalLinks – databaseName: Scholars Portal Journals: Open Access(OpenAccess)
  dbid: M48
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwdV1di9QwFA26IvgifltXJYovPnRpkzRJH0QG13UQVwbWgX0rSZowwm67TmdkB_-896btrKPrW2lCWnKT5pzej0PIm0zZUvsCnazAVYUXdaoBeKTosVEIKoLDROHjr3I6F59Pi9Or9OhhArtrqR3qSc2XZweXPzbvYcO_6xNggMD5pj33k4NYvixFCdtbTABPx0C-AezH77LOZRnltBhcYP60Gv2W1wyCVYKFKEoWFeivjqybCwyY_BeN_h1U-ccpdXSP3B3gJZ306-E-ueGbB-R2Lzi5eUh-HS5NWNFP8S3oyRhGTdtADZ0tgLzDC_ZpjWcbehhjNqDfGnAp9pl1fl23sHBNR7sN_hE00BpVJjqKiSr0eIhPpCfRKUBnW32w7hGZH3389mGaDvILqeMyW6Wlypwpc--Mli44m1krcxeUdrm2NfA2aXUNiFDJLFgmQhmM5MDNoSGzAHP4Y7LXtI1_SqgKvK5NFmThmDA214aVgtfBhUJ7bYuEvB1nuLroq2xUkZ0wXQ2GqaJhqpwn5DWYYNsNy2NPJ18qvIfV8gpeZD_zhLwaLVTBfkEniGl8u-6A6pRMAY9TIiFPeottxxoNnhC1Y8udh-22NN8XsSY3LzN0oD7775j75A5gLYz4SRl_TvZWy7V_AXhmZV_GZfobPnTztQ
  priority: 102
  providerName: Scholars Portal
Title Draft Genome Sequences of a Phylogenetically Diverse Suite of Pseudomonas syringae Strains from Multiple Source Populations
URI https://www.ncbi.nlm.nih.gov/pubmed/24459267
https://search.proquest.com/docview/1492708674
https://hal.science/hal-01605350
https://pubmed.ncbi.nlm.nih.gov/PMC3900899
Volume 2
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Li9swEB42C4VeSt91H4taeunBiR96-Rj20VCaEtgu7M1IskQWNvayTgphYX97R7KdbtpbLz5Ysi08Y-v7NJ9mAD4nQhfSMh9kRa5KLa1iicAj9hEb4UGFM36j8PwHn13Qb5fs8gDYsBcmiPaNvhrX16txfbUM2sqblZkMOrHJYn6MPN1HqyYjGKGDPqDo4fcrU15QOYQkMyR4tm5WdjoO6c3i1JfOwUmNFVkoLv9nNhotvRbyX6D5t17ywQR09hSe9MiRTLsRPoMDWz-HR10tye0LuDu5VW5NvoZRkPNBIU0aRxRZLJGX4wC7HYvXW3IS5BjYb4OQ0_dZtHZTNeiTqiXt1i_2KWwNBSRa4vegkHkvPSTnYb2fLHalv9qXcHF2-vN4FveVFWKT82QdFyIxqkitUZIbZ3SiNU-NE9KkUldIybiWFYI9wROnM-oKp3iOtBsbEo0IJn8Fh3VT2zdAhMurSiWOM5NRpVOpsoLmlTOOSSs1i-DL8IbLmy6BRhmIRybL3jBlMEyZ5hF8QhPsuvnM17Pp99Kf84nwWM6SX2kEHwcLlfgp-PiGqm2zaZHFFJlAiiZoBK87i-3uNRg8ArFny72H7beg94V02723vf3vK9_BY4RZXuwTZ_l7OFzfbuwHhDJrfQSjOZX-eH96FNz4N0Fy-Sc
link.rule.ids 230,315,730,783,787,888,2228,24330,27936,27937,53804,53806
linkProvider National Library of Medicine
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lb9QwEB61RQgu5VkIT4O4cEg2DydxjquWssButVJb1FtkO7a2optUTVJp4c8zdpKlW05wXTvJWjOOvy_zzQzABz8VGVOxCbIiV6WKFi5D4OGaiE1qQIWWJlF4dpRMTunXs_hsC-IhF8aK9qU498qLpVeeL6y28nIpR4NObDSf7SNPN9Gq0Tbcwf3q0xsk3b6AWZBklA1ByRApniqrpRp7tsCZG5jmOXisxVlo28v_OY-2F0YN-TfUvK2YvHEEHT6A78Of75QnP7y2EZ78eauu4z-v7iHs9qCUjLvhR7Clysdwt2tTuXoCvw6uuG7IZ7s8cjyIr0mlCSfzBVJ-XHmXDHmxIgdW6YHzWkSzZs68Vm1RobvzmtQr8x2R46jtTVETk95CZr2qkRzbUAKZr7uK1U_h9PDTyf7E7Zs2uDJK_MbNUl_yLFCSs0RqKXwhkkDqlMmAiQLZXiJYgTgyTXwtQqozzZMIGT0O-ALBUbQHO2VVqudAUh0VBfd1EsuQchEwHmY0KrTUMVNMxA58HEyXX3a1OXLLaUKW9xbPrcXzIHLgPdp2Pc0U1Z6Mp7n5zdTYi6PYvw4ceDeYPsddZkInvFRVWyNBysIU2V9KHXjWucL6XoMnOZBuOMnGwzZH0PS2kndv6hf_feVbuDc5mU3z6Zejby_hPqI5oylyw-gV7DRXrXqNiKkRb-z--A0Wsxkn
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lb9QwELZoEYhLeRbC0yAuHJJ1Xo5zXHVZFuhWkUqliktkO7a2opusmqTSwp9n7CTLbrn1GjuJRjOOvy_zeQahjyQRKVOxSbICV41UVLgMgIdrMjaJARVamoPC8xM6O4u-ncfnW62-rGhfiguvvFx65cXCaitXSzkadGKjbH4EPN1kq0arQo_20F1Ys4RuEXX7EWY-TSM2JCYDoHmqrJZq7NkiZ65vGujA1hangW0x_29P2lsYReT_cPOmanJrG5o-RD8HAzr1yS-vbYQnf9-o7XgrCx-hgx6c4nE35TG6o8on6F7XrnL9FP2ZXHHd4C_WRHw6iLBxpTHH2QKoP1jfHYq8XOOJVXzAvBZQrZmT1aotKgh7XuN6bf4nchi1PSpqbI654HmvbsSnNqWAs013sfoZOpt-_nE0c_vmDa4MKWncNCGSp76SnFGppSBCUF_qhEmfiQJYHxWsADyZUKJFEOlUcxoCs4cBIgAkhYdov6xK9QLhRIdFwYmmsQwiLnzGgzQKCy11zBQTsYM-De7LV12Njtxym4Dlvddz6_XcDx30Afy7mWaKa8_Gx7m5ZmrtxWFMrn0HvR_cn8NqMykUXqqqrYEopUECLDCJHPS8C4fNs4ZoclCyEyg7L9sdAffbit69u1_e-s536H42mebHX0--v0IPANQZaZEbhK_RfnPVqjcAnBrx1i6Rv8J-G6c
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Draft+Genome+Sequences+of+a+Phylogenetically+Diverse+Suite+of+Pseudomonas+syringae+Strains+from+Multiple+Source+Populations&rft.jtitle=Genome+announcements+%28Washington%2C+DC%29&rft.au=Baltrus%2C+David+A&rft.au=Yourstone%2C+Scott&rft.au=Lind%2C+Abigail&rft.au=Guilbaud%2C+Caroline&rft.date=2014-01-23&rft.issn=2169-8287&rft.eissn=2169-8287&rft.volume=2&rft.issue=1&rft_id=info:doi/10.1128%2FgenomeA.01195-13&rft_id=info%3Apmid%2F24459267&rft.externalDocID=24459267
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2169-8287&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2169-8287&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2169-8287&client=summon