Genetic variant of TMBIM1 is associated with the susceptibility of colorectal cancer in the Chinese population
•The allele G of rs992157 was significantly associated with an increased risk of colorectal cancer.•Patients with allele G were more likely to develop lymph node metastasis and distant metastasis.•The mean expression level of TMBIM1 was significantly higher in tumor tissue than in the adjacent norma...
Saved in:
Published in | Clinics and research in hepatology and gastroenterology Vol. 43; no. 3; pp. 324 - 329 |
---|---|
Main Authors | , , , , , |
Format | Journal Article |
Language | English |
Published |
France
Elsevier Masson SAS
01.06.2019
|
Subjects | |
Online Access | Get full text |
Cover
Loading…
Abstract | •The allele G of rs992157 was significantly associated with an increased risk of colorectal cancer.•Patients with allele G were more likely to develop lymph node metastasis and distant metastasis.•The mean expression level of TMBIM1 was significantly higher in tumor tissue than in the adjacent normal tissues.•Patients with genotype GG had remarkably higher TMBIM1 expression in the tumors than those with genotype AA.•SNP rs145204276 may increase the risk of CRC possibly via up-regulation of TMBIM1.
Recent meta-analysis of genome-wide association studies (GWASs) identified a novel variant rs992157 at 2q35 that was associated with colorectal cancer (CRC) in the population of European ancestry. We aimed to replicate the association of rs992157 with CRC in the Chinese population and to further determine the real susceptible gene of CRC as indicated by this variant.
824 CRC patients and 1063 healthy controls were included. The frequency of the genotype and the allele of rs992157 were compared between the patients and the controls and between different subgroups of patients classified by status of metastasis. Expression level of TMBIM1 was compared between the tumor tissue and the adjacent normal tissues collected from 43 patients during surgery. Besides, the relationship between genotypes of rs992157 and the tissue expression of TMBIM1 was analyzed.
Patients were found to have significantly higher frequency of allele G than the controls (44.2% vs. 40.0%, P = 0.009; OR = 1.18). Moreover, allele G was associated with an increased risk of lymph node metastasis (P = 0.02) and distant metastasis of CRC (P = 0.04). The mean expression level of TMBIM1 was significantly higher in tumor tissue than in the adjacent normal tissues (0.0019 ± 0.00068 vs. 0.00041 ± 0.00024, P < 0.001). In addition, patients with genotype GG were found to have remarkably higher TMBIM1 expression in the tumors than those with genotype AA (0.0024 ± 0.00052 vs. 0.0015 ± 0.00078, P = 0.005).
Variant rs992157 is significantly associated with the susceptibility and progression of CRC. It can increase the risk of CRC possibly via up-regulation of TMBIM1. |
---|---|
AbstractList | Recent meta-analysis of genome-wide association studies (GWASs) identified a novel variant rs992157 at 2q35 that was associated with colorectal cancer (CRC) in the population of European ancestry. We aimed to replicate the association of rs992157 with CRC in the Chinese population and to further determine the real susceptible gene of CRC as indicated by this variant.
824 CRC patients and 1063 healthy controls were included. The frequency of the genotype and the allele of rs992157 were compared between the patients and the controls and between different subgroups of patients classified by status of metastasis. Expression level of TMBIM1 was compared between the tumor tissue and the adjacent normal tissues collected from 43 patients during surgery. Besides, the relationship between genotypes of rs992157 and the tissue expression of TMBIM1 was analyzed.
Patients were found to have significantly higher frequency of allele G than the controls (44.2% vs. 40.0%, P = 0.009; OR = 1.18). Moreover, allele G was associated with an increased risk of lymph node metastasis (P = 0.02) and distant metastasis of CRC (P = 0.04). The mean expression level of TMBIM1 was significantly higher in tumor tissue than in the adjacent normal tissues (0.0019 ± 0.00068 vs. 0.00041 ± 0.00024, P < 0.001). In addition, patients with genotype GG were found to have remarkably higher TMBIM1 expression in the tumors than those with genotype AA (0.0024 ± 0.00052 vs. 0.0015 ± 0.00078, P = 0.005).
Variant rs992157 is significantly associated with the susceptibility and progression of CRC. It can increase the risk of CRC possibly via up-regulation of TMBIM1. •The allele G of rs992157 was significantly associated with an increased risk of colorectal cancer.•Patients with allele G were more likely to develop lymph node metastasis and distant metastasis.•The mean expression level of TMBIM1 was significantly higher in tumor tissue than in the adjacent normal tissues.•Patients with genotype GG had remarkably higher TMBIM1 expression in the tumors than those with genotype AA.•SNP rs145204276 may increase the risk of CRC possibly via up-regulation of TMBIM1. Recent meta-analysis of genome-wide association studies (GWASs) identified a novel variant rs992157 at 2q35 that was associated with colorectal cancer (CRC) in the population of European ancestry. We aimed to replicate the association of rs992157 with CRC in the Chinese population and to further determine the real susceptible gene of CRC as indicated by this variant. 824 CRC patients and 1063 healthy controls were included. The frequency of the genotype and the allele of rs992157 were compared between the patients and the controls and between different subgroups of patients classified by status of metastasis. Expression level of TMBIM1 was compared between the tumor tissue and the adjacent normal tissues collected from 43 patients during surgery. Besides, the relationship between genotypes of rs992157 and the tissue expression of TMBIM1 was analyzed. Patients were found to have significantly higher frequency of allele G than the controls (44.2% vs. 40.0%, P = 0.009; OR = 1.18). Moreover, allele G was associated with an increased risk of lymph node metastasis (P = 0.02) and distant metastasis of CRC (P = 0.04). The mean expression level of TMBIM1 was significantly higher in tumor tissue than in the adjacent normal tissues (0.0019 ± 0.00068 vs. 0.00041 ± 0.00024, P < 0.001). In addition, patients with genotype GG were found to have remarkably higher TMBIM1 expression in the tumors than those with genotype AA (0.0024 ± 0.00052 vs. 0.0015 ± 0.00078, P = 0.005). Variant rs992157 is significantly associated with the susceptibility and progression of CRC. It can increase the risk of CRC possibly via up-regulation of TMBIM1. Recent meta-analysis of genome-wide association studies (GWASs) identified a novel variant rs992157 at 2q35 that was associated with colorectal cancer (CRC) in the population of European ancestry. We aimed to replicate the association of rs992157 with CRC in the Chinese population and to further determine the real susceptible gene of CRC as indicated by this variant.BACKGROUND AND AIMSRecent meta-analysis of genome-wide association studies (GWASs) identified a novel variant rs992157 at 2q35 that was associated with colorectal cancer (CRC) in the population of European ancestry. We aimed to replicate the association of rs992157 with CRC in the Chinese population and to further determine the real susceptible gene of CRC as indicated by this variant.824 CRC patients and 1063 healthy controls were included. The frequency of the genotype and the allele of rs992157 were compared between the patients and the controls and between different subgroups of patients classified by status of metastasis. Expression level of TMBIM1 was compared between the tumor tissue and the adjacent normal tissues collected from 43 patients during surgery. Besides, the relationship between genotypes of rs992157 and the tissue expression of TMBIM1 was analyzed.METHODS824 CRC patients and 1063 healthy controls were included. The frequency of the genotype and the allele of rs992157 were compared between the patients and the controls and between different subgroups of patients classified by status of metastasis. Expression level of TMBIM1 was compared between the tumor tissue and the adjacent normal tissues collected from 43 patients during surgery. Besides, the relationship between genotypes of rs992157 and the tissue expression of TMBIM1 was analyzed.Patients were found to have significantly higher frequency of allele G than the controls (44.2% vs. 40.0%, P = 0.009; OR = 1.18). Moreover, allele G was associated with an increased risk of lymph node metastasis (P = 0.02) and distant metastasis of CRC (P = 0.04). The mean expression level of TMBIM1 was significantly higher in tumor tissue than in the adjacent normal tissues (0.0019 ± 0.00068 vs. 0.00041 ± 0.00024, P < 0.001). In addition, patients with genotype GG were found to have remarkably higher TMBIM1 expression in the tumors than those with genotype AA (0.0024 ± 0.00052 vs. 0.0015 ± 0.00078, P = 0.005).RESULTSPatients were found to have significantly higher frequency of allele G than the controls (44.2% vs. 40.0%, P = 0.009; OR = 1.18). Moreover, allele G was associated with an increased risk of lymph node metastasis (P = 0.02) and distant metastasis of CRC (P = 0.04). The mean expression level of TMBIM1 was significantly higher in tumor tissue than in the adjacent normal tissues (0.0019 ± 0.00068 vs. 0.00041 ± 0.00024, P < 0.001). In addition, patients with genotype GG were found to have remarkably higher TMBIM1 expression in the tumors than those with genotype AA (0.0024 ± 0.00052 vs. 0.0015 ± 0.00078, P = 0.005).Variant rs992157 is significantly associated with the susceptibility and progression of CRC. It can increase the risk of CRC possibly via up-regulation of TMBIM1.CONCLUSIONVariant rs992157 is significantly associated with the susceptibility and progression of CRC. It can increase the risk of CRC possibly via up-regulation of TMBIM1. |
Author | Li, Qianjun Chen, Jiebin Yang, Bin Zhang, Jie Fu, Yiwei Guo, Huimin |
Author_xml | – sequence: 1 givenname: Jie surname: Zhang fullname: Zhang, Jie organization: Department of Gastroenterology, Jiangsu Taizhou People's Hospital, Taizhou, PR China – sequence: 2 givenname: Yiwei surname: Fu fullname: Fu, Yiwei organization: Department of Gastroenterology, Jiangsu Taizhou People's Hospital, Taizhou, PR China – sequence: 3 givenname: Jiebin surname: Chen fullname: Chen, Jiebin organization: Department of Paediatrics, Jiangsu Taizhou People's Hospital, Taizhou, PR China – sequence: 4 givenname: Qianjun surname: Li fullname: Li, Qianjun organization: Department of Gastroenterology, Huai’an First People's Hospital of Nanjing Medical University, Huai'an, PR China – sequence: 5 givenname: Huimin surname: Guo fullname: Guo, Huimin organization: Department of Gastroenterology, The Drum Tower Hospital of Nanjing University Medical School, Nanjing, PR China – sequence: 6 givenname: Bin surname: Yang fullname: Yang, Bin email: yangbintaizhou@126.com organization: Department of Gastroenterology, Jiangsu Taizhou People's Hospital, Taizhou, PR China |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/30447906$$D View this record in MEDLINE/PubMed |
BookMark | eNqFkU9vEzEQxS1URP_Qb4CQj1wSbO_amyAuNIK2UisuReJmzXpnlQmOvdjeonx7NknLgQPMxaOn3xuN552zkxADMvZGirkU0rzfzJ2nkHCuhFxM0lzI6gU7U0qKWVPL7yd_eiFP2WXOGzFVrcWika_YaSXqulkKc8bCNQYs5PgjJIJQeOz5w_3V7b3klDnkHB1BwY7_orLmZY08j9nhUKglT2W35130MaEr4LmD4DBxCgd0taaAGfkQh9FDoRhes5c9-IyXT-8F-_bl88PqZnb39fp29elu5iojykyrRhkE7DqDSraq7xYANfRL3Sx05Tona-HMpPXY6lYuVQMNts4ojboFENUFe3ecO6T4c8Rc7Jamtb2HgHHMVslKm0pXjZnQt0_o2G6xs0OiLaSdfb7RBHw4Ai7FnBP21lE5_KYkIG-lsPtM7MYeM7H7TPbqlMlkrv8yP8__j-3j0YbTkR4J0wEiB_4H7mwX6d_23-pfqFw |
CitedBy_id | crossref_primary_10_1016_j_ebiom_2024_105126 crossref_primary_10_2139_ssrn_3951381 crossref_primary_10_1016_j_tranon_2022_101391 crossref_primary_10_1126_sciadv_abe5469 |
Cites_doi | 10.1016/j.ejca.2012.11.011 10.1038/ng2089 10.1038/sj.bjc.6600733 10.1016/j.immuni.2015.08.013 10.1016/j.amepre.2017.07.016 10.1007/s00439-013-1390-4 10.1093/nar/gkv1340 10.1186/1471-2407-6-83 10.1093/carcin/bgw046 10.1007/978-1-59745-159-8_14 10.1038/ng.670 10.1093/carcin/bgq146 10.1017/S0016672315000105 10.1002/ijc.31076 10.1007/978-1-61737-954-3_6 10.1002/humu.22454 10.1093/hmg/ddw087 10.18632/oncotarget.15810 10.1371/journal.pone.0143298 10.1016/j.gie.2017.05.035 10.1093/jjco/hyx089 10.1016/j.bbamcr.2015.03.002 |
ContentType | Journal Article |
Copyright | 2018 Elsevier Masson SAS Copyright © 2018 Elsevier Masson SAS. All rights reserved. |
Copyright_xml | – notice: 2018 Elsevier Masson SAS – notice: Copyright © 2018 Elsevier Masson SAS. All rights reserved. |
DBID | AAYXX CITATION CGR CUY CVF ECM EIF NPM 7X8 |
DOI | 10.1016/j.clinre.2018.10.013 |
DatabaseName | CrossRef Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed MEDLINE - Academic |
DatabaseTitle | CrossRef MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) MEDLINE - Academic |
DatabaseTitleList | MEDLINE MEDLINE - Academic |
Database_xml | – sequence: 1 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 2 dbid: EIF name: MEDLINE url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search sourceTypes: Index Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Medicine |
EISSN | 2210-741X |
EndPage | 329 |
ExternalDocumentID | 30447906 10_1016_j_clinre_2018_10_013 S2210740118302298 |
Genre | Journal Article |
GeographicLocations | China |
GeographicLocations_xml | – name: China |
GroupedDBID | --M .1- .55 .FO .~1 08J 08T 0R~ 1P~ 1~. 4.4 457 4G. 53G 5VS 7-5 8P~ AAEDT AAEDW AAIKJ AAKOC AALRI AAOAW AATTM AAXKI AAXUO AAYWO ABJNI ABMAC ABMZM ABWVN ABXDB ACDAQ ACGFS ACIEU ACRLP ACRPL ACVFH ADBBV ADCNI ADEZE ADMUD ADNMO ADVLN AEBSH AEIPS AEKER AENEX AEUPX AEVXI AFJKZ AFPUW AFRHN AFTJW AFXIZ AGCQF AGHFR AGUBO AGYEJ AIEXJ AIGII AIIUN AIKHN AITUG AJRQY AJUYK AKBMS AKRWK AKYEP ALMA_UNASSIGNED_HOLDINGS AMRAJ ANKPU ANZVX APXCP AXJTR BKOJK BLXMC BNPGV EBS EFJIC EFKBS EJD F5P FDB FIRID FNPLU FYGXN GBLVA HZ~ J1W KOM MO0 O-L O9- OAUVE OC. ON0 P-8 P-9 PC. Q38 ROL SDF SEM SES SPCBC SSH SSZ T5K X7M Z5R ~G- AAYXX AGRNS CITATION RIG CGR CUY CVF ECM EIF NPM 7X8 |
ID | FETCH-LOGICAL-c360t-52726eaedd6e21b2fd8aa4af957853cdc140c68aafeb5b1927a7ebc625e5baa03 |
ISSN | 2210-7401 2210-741X |
IngestDate | Fri Jul 11 16:41:14 EDT 2025 Mon Jul 21 06:09:38 EDT 2025 Thu Apr 24 23:00:10 EDT 2025 Tue Jul 01 00:58:40 EDT 2025 Tue Aug 26 16:39:48 EDT 2025 |
IsPeerReviewed | true |
IsScholarly | true |
Issue | 3 |
Keywords | Metastasis Colorectal cancer TMBIM1 Polymorphism |
Language | English |
License | Copyright © 2018 Elsevier Masson SAS. All rights reserved. |
LinkModel | OpenURL |
MergedId | FETCHMERGED-LOGICAL-c360t-52726eaedd6e21b2fd8aa4af957853cdc140c68aafeb5b1927a7ebc625e5baa03 |
Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
PMID | 30447906 |
PQID | 2135635376 |
PQPubID | 23479 |
PageCount | 6 |
ParticipantIDs | proquest_miscellaneous_2135635376 pubmed_primary_30447906 crossref_citationtrail_10_1016_j_clinre_2018_10_013 crossref_primary_10_1016_j_clinre_2018_10_013 elsevier_clinicalkey_doi_10_1016_j_clinre_2018_10_013 |
ProviderPackageCode | CITATION AAYXX |
PublicationCentury | 2000 |
PublicationDate | June 2019 2019-06-00 20190601 |
PublicationDateYYYYMMDD | 2019-06-01 |
PublicationDate_xml | – month: 06 year: 2019 text: June 2019 |
PublicationDecade | 2010 |
PublicationPlace | France |
PublicationPlace_xml | – name: France |
PublicationTitle | Clinics and research in hepatology and gastroenterology |
PublicationTitleAlternate | Clin Res Hepatol Gastroenterol |
PublicationYear | 2019 |
Publisher | Elsevier Masson SAS |
Publisher_xml | – name: Elsevier Masson SAS |
References | Houlston, Cheadle, Dobbins, Tenesa, Jones, Howarth (bib0060) 2010; 42 Tanskanen, van den Berg, Valimaki, Aavikko, Ness-Jensen, Hveem (bib0075) 2018; 142 Segui, Pineda, Navarro, Lazaro, Brunet, Infante (bib0025) 2014; 35 Schleinitz, Distefano, Kovacs (bib0085) 2011; 700 Orlando, Law, Palin, Tuupanen, Gylfe, Hanninen (bib0070) 2016; 25 Therkildsen, Jonsson, Dominguez-Valentin, Nissen, Rambech, Halvarsson (bib0030) 2013; 49 Fernandez-Rozadilla, Cazier, Tomlinson, Brea-Fernandez, Lamas, Baiget (bib0055) 2014; 133 Imperiale (bib0010) 2017; 86 Kashfi, Golmohammadi, Behboudi, Nazemalhosseini-Mojarad, Zali (bib0045) 2013; 6 Dupaul-Chicoine, Arabzadeh, Dagenais, Douglas, Champagne, Morizot (bib0120) 2015; 43 Esteban-Jurado, Gimenez-Zaragoza, Munoz, Franch-Exposito, Alvarez-Barona, Ocana (bib0040) 2017; 8 Ward, Kellis (bib0110) 2016; 44 Lisak, Schacht, Enders, Habicht, Kiviluoto, Schneider (bib0115) 2015; 1853 Chen, Tsai, Jao, Huang, Chao, Chen (bib0035) 2006; 6 Mamot, Mild, Reuter, Laffer, Metzger, Terracciano (bib0050) 2003; 88 Shen, Luo, Wang (bib0090) 2006; 128 Laitman, Jaeger, Katz, Tomlinson, Friedman (bib0020) 2015; 97 Zanke, Greenwood, Rangrej, Kustra, Tenesa, Farrington (bib0105) 2007; 39 Schmit, Schumacher, Edlund, Conti, Ihenacho, Wan (bib0065) 2016; 37 Lascorz, Forsti, Chen, Buch, Steinke, Rahner (bib0100) 2010; 31 Matsuda, Okuyama (bib0015) 2017; 47 Han, Lei, Zhou, Gao, Liu, Li (bib0095) 2015; 10 Chen, Sundaram, Chew, Ladabaum (bib0005) 2017; 53 Horie, Kitaichi, Katsuyama, Yoshida, Miura, Ota (bib0080) 2009; 15 Matsuda (10.1016/j.clinre.2018.10.013_bib0015) 2017; 47 Horie (10.1016/j.clinre.2018.10.013_bib0080) 2009; 15 Imperiale (10.1016/j.clinre.2018.10.013_bib0010) 2017; 86 Mamot (10.1016/j.clinre.2018.10.013_bib0050) 2003; 88 Schleinitz (10.1016/j.clinre.2018.10.013_bib0085) 2011; 700 Ward (10.1016/j.clinre.2018.10.013_bib0110) 2016; 44 Han (10.1016/j.clinre.2018.10.013_bib0095) 2015; 10 Schmit (10.1016/j.clinre.2018.10.013_bib0065) 2016; 37 Tanskanen (10.1016/j.clinre.2018.10.013_bib0075) 2018; 142 Orlando (10.1016/j.clinre.2018.10.013_bib0070) 2016; 25 Lisak (10.1016/j.clinre.2018.10.013_bib0115) 2015; 1853 Dupaul-Chicoine (10.1016/j.clinre.2018.10.013_bib0120) 2015; 43 Kashfi (10.1016/j.clinre.2018.10.013_bib0045) 2013; 6 Therkildsen (10.1016/j.clinre.2018.10.013_bib0030) 2013; 49 Shen (10.1016/j.clinre.2018.10.013_bib0090) 2006; 128 Esteban-Jurado (10.1016/j.clinre.2018.10.013_bib0040) 2017; 8 Fernandez-Rozadilla (10.1016/j.clinre.2018.10.013_bib0055) 2014; 133 Lascorz (10.1016/j.clinre.2018.10.013_bib0100) 2010; 31 Chen (10.1016/j.clinre.2018.10.013_bib0035) 2006; 6 Zanke (10.1016/j.clinre.2018.10.013_bib0105) 2007; 39 Chen (10.1016/j.clinre.2018.10.013_bib0005) 2017; 53 Laitman (10.1016/j.clinre.2018.10.013_bib0020) 2015; 97 Segui (10.1016/j.clinre.2018.10.013_bib0025) 2014; 35 Houlston (10.1016/j.clinre.2018.10.013_bib0060) 2010; 42 |
References_xml | – volume: 97 start-page: 11 year: 2015 ident: bib0020 article-title: GREM1 germline mutation screening in Ashkenazi Jewish patients with familial colorectal cancer publication-title: Genet Res – volume: 37 start-page: 547 year: 2016 end-page: 556 ident: bib0065 article-title: Genome-wide association study of colorectal cancer in Hispanics publication-title: Carcinogenesis – volume: 142 start-page: 540 year: 2018 end-page: 546 ident: bib0075 article-title: Genome-wide association study and meta-analysis in Northern European populations replicate multiple colorectal cancer risk loci publication-title: Int J Cancer – volume: 39 start-page: 989 year: 2007 end-page: 994 ident: bib0105 article-title: Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24 publication-title: Nature Genet – volume: 49 start-page: 1226 year: 2013 end-page: 1235 ident: bib0030 article-title: Gain of chromosomal region 20q and loss of 18 discriminates between Lynch syndrome and familial colorectal cancer publication-title: Eur J Cancer – volume: 8 start-page: 26732 year: 2017 end-page: 26743 ident: bib0040 article-title: POLE and POLD1 screening in 155 patients with multiple polyps and early-onset colorectal cancer publication-title: Oncotarget – volume: 128 start-page: 209 year: 2006 end-page: 224 ident: bib0090 article-title: High-throughput single-nucleotide polymorphisms genotyping: TaqMan assay and pyrosequencing assay publication-title: Methods Mol Med – volume: 35 start-page: 50 year: 2014 end-page: 52 ident: bib0025 article-title: GALNT12 is not a major contributor of familial colorectal cancer type X publication-title: Human Mutat – volume: 43 start-page: 751 year: 2015 end-page: 763 ident: bib0120 article-title: The Nlrp3 inflammasome suppresses colorectal cancer metastatic growth in the liver by promoting natural killer cell tumoricidal activity publication-title: Immunity – volume: 42 start-page: 973 year: 2010 end-page: 977 ident: bib0060 article-title: Meta-analysis of three genome-wide association studies identifies susceptibility loci for colorectal cancer at 1q41, 3q26.2, 12q13.13 and 20q13.33 publication-title: Nature Genet – volume: 47 start-page: 669 year: 2017 end-page: 670 ident: bib0015 article-title: The estimates of 5-year colorectal cancer prevalence in adult population in 2012 publication-title: Jpn J Clin Oncol – volume: 86 start-page: 900 year: 2017 end-page: 902 ident: bib0010 article-title: The rising prevalence of early-onset colorectal cancer: Ready and FIT to tackle? publication-title: Gastrointest Endosc – volume: 133 start-page: 525 year: 2014 end-page: 534 ident: bib0055 article-title: A genome-wide association study on copy-number variation identifies a 11q11 loss as a candidate susceptibility variant for colorectal cancer publication-title: Human Genet – volume: 1853 start-page: 2104 year: 2015 end-page: 2114 ident: bib0115 article-title: The transmembrane Bax inhibitor motif (TMBIM) containing protein family: Tissue expression, intracellular localization and effects on the ER CA(2)(+)-filling state publication-title: Biochim Biophys Acta – volume: 6 start-page: 1 year: 2013 end-page: 10 ident: bib0045 article-title: MUTYH the base excision repair gene family member associated with colorectal cancer polyposis publication-title: Gastroenterol Hepatol Bed Bench – volume: 44 start-page: 877 year: 2016 end-page: 881 ident: bib0110 article-title: HaploReg v4: systematic mining of putative causal variants, cell types, regulators and target genes for human complex traits and disease publication-title: Nucleic Acids Res – volume: 6 start-page: 83 year: 2006 ident: bib0035 article-title: Single nucleotide polymorphisms of the APC gene and colorectal cancer risk: a case-control study in Taiwan publication-title: BMC Cancer – volume: 700 start-page: 77 year: 2011 end-page: 87 ident: bib0085 article-title: Targeted SNP genotyping using the TaqMan(R) assay publication-title: Methods Mol Biol – volume: 15 start-page: 1115 year: 2009 end-page: 1119 ident: bib0080 article-title: Evaluation of PTPN22 polymorphisms and Vogt-Koyanagi-Harada disease in Japanese patients publication-title: Mol Vision – volume: 25 start-page: 2349 year: 2016 end-page: 2359 ident: bib0070 article-title: Variation at 2q35 (PNKD and TMBIM1) influences colorectal cancer risk and identifies a pleiotropic effect with inflammatory bowel disease publication-title: Human Mol Genet – volume: 31 start-page: 1612 year: 2010 end-page: 1619 ident: bib0100 article-title: Genome-wide association study for colorectal cancer identifies risk polymorphisms in German familial cases and implicates MAPK signalling pathways in disease susceptibility publication-title: Carcinogenesis – volume: 53 start-page: 933 year: 2017 end-page: 934 ident: bib0005 article-title: Low prevalence of criteria for early screening in young-onset colorectal cancer publication-title: Am J Prev Med – volume: 88 start-page: 420 year: 2003 end-page: 423 ident: bib0050 article-title: Infrequent mutation of the tumour-suppressor gene Smad4 in early-stage colorectal cancer publication-title: Br J Cancer – volume: 10 start-page: e0143298 year: 2015 ident: bib0095 article-title: Association between BMP15 gene polymorphism and reproduction traits and its tissues expression characteristics in chicken publication-title: PlOS One – volume: 6 start-page: 1 year: 2013 ident: 10.1016/j.clinre.2018.10.013_bib0045 article-title: MUTYH the base excision repair gene family member associated with colorectal cancer polyposis publication-title: Gastroenterol Hepatol Bed Bench – volume: 49 start-page: 1226 year: 2013 ident: 10.1016/j.clinre.2018.10.013_bib0030 article-title: Gain of chromosomal region 20q and loss of 18 discriminates between Lynch syndrome and familial colorectal cancer publication-title: Eur J Cancer doi: 10.1016/j.ejca.2012.11.011 – volume: 39 start-page: 989 year: 2007 ident: 10.1016/j.clinre.2018.10.013_bib0105 article-title: Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24 publication-title: Nature Genet doi: 10.1038/ng2089 – volume: 88 start-page: 420 year: 2003 ident: 10.1016/j.clinre.2018.10.013_bib0050 article-title: Infrequent mutation of the tumour-suppressor gene Smad4 in early-stage colorectal cancer publication-title: Br J Cancer doi: 10.1038/sj.bjc.6600733 – volume: 43 start-page: 751 year: 2015 ident: 10.1016/j.clinre.2018.10.013_bib0120 article-title: The Nlrp3 inflammasome suppresses colorectal cancer metastatic growth in the liver by promoting natural killer cell tumoricidal activity publication-title: Immunity doi: 10.1016/j.immuni.2015.08.013 – volume: 53 start-page: 933 year: 2017 ident: 10.1016/j.clinre.2018.10.013_bib0005 article-title: Low prevalence of criteria for early screening in young-onset colorectal cancer publication-title: Am J Prev Med doi: 10.1016/j.amepre.2017.07.016 – volume: 133 start-page: 525 year: 2014 ident: 10.1016/j.clinre.2018.10.013_bib0055 article-title: A genome-wide association study on copy-number variation identifies a 11q11 loss as a candidate susceptibility variant for colorectal cancer publication-title: Human Genet doi: 10.1007/s00439-013-1390-4 – volume: 44 start-page: 877 year: 2016 ident: 10.1016/j.clinre.2018.10.013_bib0110 article-title: HaploReg v4: systematic mining of putative causal variants, cell types, regulators and target genes for human complex traits and disease publication-title: Nucleic Acids Res doi: 10.1093/nar/gkv1340 – volume: 6 start-page: 83 year: 2006 ident: 10.1016/j.clinre.2018.10.013_bib0035 article-title: Single nucleotide polymorphisms of the APC gene and colorectal cancer risk: a case-control study in Taiwan publication-title: BMC Cancer doi: 10.1186/1471-2407-6-83 – volume: 37 start-page: 547 year: 2016 ident: 10.1016/j.clinre.2018.10.013_bib0065 article-title: Genome-wide association study of colorectal cancer in Hispanics publication-title: Carcinogenesis doi: 10.1093/carcin/bgw046 – volume: 128 start-page: 209 year: 2006 ident: 10.1016/j.clinre.2018.10.013_bib0090 article-title: High-throughput single-nucleotide polymorphisms genotyping: TaqMan assay and pyrosequencing assay publication-title: Methods Mol Med doi: 10.1007/978-1-59745-159-8_14 – volume: 42 start-page: 973 year: 2010 ident: 10.1016/j.clinre.2018.10.013_bib0060 article-title: Meta-analysis of three genome-wide association studies identifies susceptibility loci for colorectal cancer at 1q41, 3q26.2, 12q13.13 and 20q13.33 publication-title: Nature Genet doi: 10.1038/ng.670 – volume: 15 start-page: 1115 year: 2009 ident: 10.1016/j.clinre.2018.10.013_bib0080 article-title: Evaluation of PTPN22 polymorphisms and Vogt-Koyanagi-Harada disease in Japanese patients publication-title: Mol Vision – volume: 31 start-page: 1612 year: 2010 ident: 10.1016/j.clinre.2018.10.013_bib0100 article-title: Genome-wide association study for colorectal cancer identifies risk polymorphisms in German familial cases and implicates MAPK signalling pathways in disease susceptibility publication-title: Carcinogenesis doi: 10.1093/carcin/bgq146 – volume: 97 start-page: 11 year: 2015 ident: 10.1016/j.clinre.2018.10.013_bib0020 article-title: GREM1 germline mutation screening in Ashkenazi Jewish patients with familial colorectal cancer publication-title: Genet Res doi: 10.1017/S0016672315000105 – volume: 142 start-page: 540 year: 2018 ident: 10.1016/j.clinre.2018.10.013_bib0075 article-title: Genome-wide association study and meta-analysis in Northern European populations replicate multiple colorectal cancer risk loci publication-title: Int J Cancer doi: 10.1002/ijc.31076 – volume: 700 start-page: 77 year: 2011 ident: 10.1016/j.clinre.2018.10.013_bib0085 article-title: Targeted SNP genotyping using the TaqMan(R) assay publication-title: Methods Mol Biol doi: 10.1007/978-1-61737-954-3_6 – volume: 35 start-page: 50 year: 2014 ident: 10.1016/j.clinre.2018.10.013_bib0025 article-title: GALNT12 is not a major contributor of familial colorectal cancer type X publication-title: Human Mutat doi: 10.1002/humu.22454 – volume: 25 start-page: 2349 year: 2016 ident: 10.1016/j.clinre.2018.10.013_bib0070 article-title: Variation at 2q35 (PNKD and TMBIM1) influences colorectal cancer risk and identifies a pleiotropic effect with inflammatory bowel disease publication-title: Human Mol Genet doi: 10.1093/hmg/ddw087 – volume: 8 start-page: 26732 year: 2017 ident: 10.1016/j.clinre.2018.10.013_bib0040 article-title: POLE and POLD1 screening in 155 patients with multiple polyps and early-onset colorectal cancer publication-title: Oncotarget doi: 10.18632/oncotarget.15810 – volume: 10 start-page: e0143298 year: 2015 ident: 10.1016/j.clinre.2018.10.013_bib0095 article-title: Association between BMP15 gene polymorphism and reproduction traits and its tissues expression characteristics in chicken publication-title: PlOS One doi: 10.1371/journal.pone.0143298 – volume: 86 start-page: 900 year: 2017 ident: 10.1016/j.clinre.2018.10.013_bib0010 article-title: The rising prevalence of early-onset colorectal cancer: Ready and FIT to tackle? publication-title: Gastrointest Endosc doi: 10.1016/j.gie.2017.05.035 – volume: 47 start-page: 669 year: 2017 ident: 10.1016/j.clinre.2018.10.013_bib0015 article-title: The estimates of 5-year colorectal cancer prevalence in adult population in 2012 publication-title: Jpn J Clin Oncol doi: 10.1093/jjco/hyx089 – volume: 1853 start-page: 2104 year: 2015 ident: 10.1016/j.clinre.2018.10.013_bib0115 article-title: The transmembrane Bax inhibitor motif (TMBIM) containing protein family: Tissue expression, intracellular localization and effects on the ER CA(2)(+)-filling state publication-title: Biochim Biophys Acta doi: 10.1016/j.bbamcr.2015.03.002 |
SSID | ssj0000450871 |
Score | 2.22322 |
Snippet | •The allele G of rs992157 was significantly associated with an increased risk of colorectal cancer.•Patients with allele G were more likely to develop lymph... Recent meta-analysis of genome-wide association studies (GWASs) identified a novel variant rs992157 at 2q35 that was associated with colorectal cancer (CRC) in... |
SourceID | proquest pubmed crossref elsevier |
SourceType | Aggregation Database Index Database Enrichment Source Publisher |
StartPage | 324 |
SubjectTerms | Apoptosis Regulatory Proteins - genetics Asian Continental Ancestry Group - genetics Case-Control Studies China Colorectal cancer Colorectal Neoplasms - genetics Disease Progression Female Gene Frequency Genetic Predisposition to Disease Genetic Variation Genotype Humans Lymphatic Metastasis - genetics Male Membrane Proteins - genetics Metastasis Middle Aged Muscle Proteins - genetics Neoplasm Metastasis - genetics Polymorphism TMBIM1 |
Title | Genetic variant of TMBIM1 is associated with the susceptibility of colorectal cancer in the Chinese population |
URI | https://www.clinicalkey.com/#!/content/1-s2.0-S2210740118302298 https://www.ncbi.nlm.nih.gov/pubmed/30447906 https://www.proquest.com/docview/2135635376 |
Volume | 43 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1bi9NAFB7qCuKLeLfeGME3SWmSye1RZcu6bFeEFPoWZiYTTVnSJRdFH3zwl3vOzCRp2V129SWUIWmTnK_nMvOdbwh5K6QKGUQqp8hdz2FMgh_ME-kEsiiESGKWS83yPQ2PVux4Hawnkz87rKWuFTP569K-kv-xKoyBXbFL9h8sO3wpDMBnsC8cwcJwvJGNUTMaBVe_Q8HLzZp-uvzwaeniNuXcvvieX44ZZtM1msaiGbE_DaUcCnZweigTggCoe-IjbqytGvXufNjhazePNXKiRt_Z6gXpqZNvEN3aUdbpK2_aeouyn_Xe9P0wTX1cDsBadDoclD9UOXIObOtIqUQ5coc0AeELPPGmq3ZnLbBRqmdXGefmQanpAEbWJg5dMma9sxFxsij0d1ytb3qvL4QAMxuxmWFnaY1CqG48Q_6eaXndV9w-_ZwtVicnWXq4Tm-R2x6UGugrZ7_dYZ4OUt55rOv24fb6DkxNE7z4M1dlOFdVMDqTSe-Te7YEoe8Nnh6QiaoekjtLS7J4RCoLK2phRbcFNbCiZUNHWFGEFQWs0H1Y4fkjrKiBFS0rfaqFFR1h9ZisFofpxyPHbsvhSD-ct07gRV6ouMrzUHmu8Io85pzxIkHdJF_mEmp2GcJYoUQgoIKIeKSEhEJbBYLzuf-EHFTbSj0jlHMXXIjImSvmjMVMCJdF3I8kLi8XLJkSv3-VmbSa9bh1ylnWkxM3mTFAhgbAUTDAlDjDVedGs-Wa84PeSlnfjwwRNANEXXPdm96kGThlXGnjldp2Tea5fgCZPATvKXlqbD3ciQ9PGiXz8PkNrn5B7o5_npfkoK079QqS4Fa81ij9C-4st5o |
linkProvider | Elsevier |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Genetic+variant+of+TMBIM1+is+associated+with+the+susceptibility+of+colorectal+cancer+in+the+Chinese+population&rft.jtitle=Clinics+and+research+in+hepatology+and+gastroenterology&rft.au=Zhang%2C+Jie&rft.au=Fu%2C+Yiwei&rft.au=Chen%2C+Jiebin&rft.au=Li%2C+Qianjun&rft.date=2019-06-01&rft.issn=2210-741X&rft.eissn=2210-741X&rft.volume=43&rft.issue=3&rft.spage=324&rft_id=info:doi/10.1016%2Fj.clinre.2018.10.013&rft.externalDBID=NO_FULL_TEXT |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2210-7401&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2210-7401&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2210-7401&client=summon |