Thalassotalea ponticola sp. nov., isolated from seawater, reclassification of Thalassomonas fusca as Thalassotalea fusca comb. nov. and emended description of the genus Thalassotalea
A Gram-stain-negative, aerobic, non-flagellated and rod-shaped or ovoid bacterial strain, designated GJSW-36T, was isolated from seawater at Geoje island in the South Sea, South Korea. Strain GJSW-36T grew optimally at pH 7.0–8.0, at 25 °C and in the presence of 2 % (w/v) NaCl. A neighbour-joining p...
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Published in | International journal of systematic and evolutionary microbiology Vol. 64; no. Pt 11; pp. 3676 - 3682 |
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Main Authors | , , , , |
Format | Journal Article |
Language | English |
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International Union of Microbiological Societies
01.11.2014
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Abstract | A Gram-stain-negative, aerobic, non-flagellated and rod-shaped or ovoid bacterial strain, designated GJSW-36T, was isolated from seawater at Geoje island in the South Sea, South Korea. Strain GJSW-36T grew optimally at pH 7.0–8.0, at 25 °C and in the presence of 2 % (w/v) NaCl. A neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain GJSW-36T fell within the clade comprising the type strains of species of the genus Thalassotalea and Thalassomonas fusca. Strain GJSW-36T exhibited 16S rRNA gene sequence similarity values of 94.2–96.0 % to the type strains of species of the genus Thalassotalea and Thalassomonas fusca and of 93.8–94.5 % to the type strains of the other species of the genus Thalassomonas. Strain GJSW-36T contained ubiquinone-8 (Q-8) as the predominant ubiquinone and summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c), C17 : 1ω8c and C16 : 0 as the major fatty acids. The major polar lipids of strain GJSW-36T were phosphatidylglycerol and phosphatidylethanolamine. The DNA G+C content of strain GJSW-36T was 45.1 mol%. Differential phenotypic properties, together with the phylogenetic distinctiveness, demonstrated that strain GJSW-36T is separated from species of the genus Thalassotalea and Thalassomonas fusca. On the basis of the data presented, strain GJSW-36T is considered to represent a novel species of the genus Thalassotalea, for which the name Thalassotalea ponticola sp. nov. is proposed. The type strain is GJSW-36T ( = KCTC 42155T = CECT 8656T). From this study, it is also proposed that Thalassomonas fusca should be reclassified as a member of the genus Thalassotalea and the description of the genus Thalassotalea is emended. |
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AbstractList | A Gram-stain-negative, aerobic, non-flagellated and rod-shaped or ovoid bacterial strain, designated GJSW-36
T
, was isolated from seawater at Geoje island in the South Sea, South Korea. Strain GJSW-36
T
grew optimally at pH 7.0–8.0, at 25 °C and in the presence of 2 % (w/v) NaCl. A neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain GJSW-36
T
fell within the clade comprising the type strains of species of the genus
Thalassotalea
and
Thalassomonas fusca
. Strain GJSW-36
T
exhibited 16S rRNA gene sequence similarity values of 94.2–96.0 % to the type strains of species of the genus
Thalassotalea
and
Thalassomonas fusca
and of 93.8–94.5 % to the type strains of the other species of the genus
Thalassomonas
. Strain GJSW-36
T
contained ubiquinone-8 (Q-8) as the predominant ubiquinone and summed feature 3 (C
16 : 1
ω7
c
and/or C
16 : 1
ω6
c
), C
17 : 1
ω8
c
and C
16 : 0
as the major fatty acids. The major polar lipids of strain GJSW-36
T
were phosphatidylglycerol and phosphatidylethanolamine. The DNA G+C content of strain GJSW-36
T
was 45.1 mol%. Differential phenotypic properties, together with the phylogenetic distinctiveness, demonstrated that strain GJSW-36
T
is separated from species of the genus
Thalassotalea
and
Thalassomonas fusca
. On the basis of the data presented, strain GJSW-36
T
is considered to represent a novel species of the genus
Thalassotalea
, for which the name
Thalassotalea ponticola
sp. nov. is proposed. The type strain is GJSW-36
T
( = KCTC 42155
T
= CECT 8656
T
). From this study, it is also proposed that
Thalassomonas fusca
should be reclassified as a member of the genus
Thalassotalea
and the description of the genus
Thalassotalea
is emended. A Gram-stain-negative, aerobic, non-flagellated and rod-shaped or ovoid bacterial strain, designated GJSW-36T, was isolated from seawater at Geoje island in the South Sea, South Korea. Strain GJSW-36T grew optimally at pH 7.0–8.0, at 25 °C and in the presence of 2 % (w/v) NaCl. A neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain GJSW-36T fell within the clade comprising the type strains of species of the genus Thalassotalea and Thalassomonas fusca. Strain GJSW-36T exhibited 16S rRNA gene sequence similarity values of 94.2–96.0 % to the type strains of species of the genus Thalassotalea and Thalassomonas fusca and of 93.8–94.5 % to the type strains of the other species of the genus Thalassomonas. Strain GJSW-36T contained ubiquinone-8 (Q-8) as the predominant ubiquinone and summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c), C17 : 1ω8c and C16 : 0 as the major fatty acids. The major polar lipids of strain GJSW-36T were phosphatidylglycerol and phosphatidylethanolamine. The DNA G+C content of strain GJSW-36T was 45.1 mol%. Differential phenotypic properties, together with the phylogenetic distinctiveness, demonstrated that strain GJSW-36T is separated from species of the genus Thalassotalea and Thalassomonas fusca. On the basis of the data presented, strain GJSW-36T is considered to represent a novel species of the genus Thalassotalea, for which the name Thalassotalea ponticola sp. nov. is proposed. The type strain is GJSW-36T ( = KCTC 42155T = CECT 8656T). From this study, it is also proposed that Thalassomonas fusca should be reclassified as a member of the genus Thalassotalea and the description of the genus Thalassotalea is emended. A Gram-stain-negative, aerobic, non-flagellated and rod-shaped or ovoid bacterial strain, designated GJSW-36(T), was isolated from seawater at Geoje island in the South Sea, South Korea. Strain GJSW-36(T) grew optimally at pH 7.0-8.0, at 25 °C and in the presence of 2% (w/v) NaCl. A neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain GJSW-36(T) fell within the clade comprising the type strains of species of the genus Thalassotalea and Thalassomonas fusca. Strain GJSW-36(T) exhibited 16S rRNA gene sequence similarity values of 94.2-96.0% to the type strains of species of the genus Thalassotalea and Thalassomonas fusca and of 93.8-94.5% to the type strains of the other species of the genus Thalassomonas. Strain GJSW-36(T) contained ubiquinone-8 (Q-8) as the predominant ubiquinone and summed feature 3 (C(16:1)ω7c and/or C(16:1)ω6c), C(1:1)ω8c and C(16:0) as the major fatty acids. The major polar lipids of strain GJSW-36(T) were phosphatidylglycerol and phosphatidylethanolamine. The DNA G+C content of strain GJSW-36(T) was 45.1 mol%. Differential phenotypic properties, together with the phylogenetic distinctiveness, demonstrated that strain GJSW-36(T) is separated from species of the genus Thalassotalea and Thalassomonas fusca. On the basis of the data presented, strain GJSW-36(T) is considered to represent a novel species of the genus Thalassotalea, for which the name Thalassotalea ponticola sp. nov. is proposed. The type strain is GJSW-36(T) ( =KCTC 42155(T) =CECT 8656(T)). From this study, it is also proposed that Thalassomonas fusca should be reclassified as a member of the genus Thalassotalea and the description of the genus Thalassotalea is emended. |
Author | Park, Sooyeon Park, Ja-Min Kang, Chul-Hyung Yoon, Jung-Hoon Jung, Yong-Taek |
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Cites_doi | 10.1016/0167-7012(84)90018-6 10.1016/S0580-9517(08)70410-0 10.1099/00207713-51-4-1283 10.1099/ijs.0.63800-0 10.1099/ijs.0.057646-0 10.1111/j.1574-6968.1984.tb01388.x 10.1007/s10482-013-0055-6 10.1099/ijs.0.027821-0 10.1017/CBO9780511527104 10.1099/ijs.0.055913-0 10.1002/jcp.1030490104 10.1099/ijs.0.000539-0 10.1099/00207713-48-1-187 10.1099/ijs.0.64130-0 10.1099/00207713-46-2-502 10.1007/0-387-28022-7_10 10.1099/00207713-44-4-846 10.1099/ijs.0.02748-0 10.1128/JB.95.5.1921-1942.1968 10.1099/00207713-51-6-1997 10.1099/ijs.0.02342-0 |
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References | Komagata (r10) 1987; 19 Bowman (r3) 2005; vol. 2 Park (r15) 2014; 64 Zhang (r25) 2014; 64 Embley (r6) 1994 Jung (r9) 2014; 105 Sasser (r16) 1990 Jean (r8) 2006; 56 Minnikin (r13) 1984; 2 Macián (r12) 2001; 51 Stackebrandt (r17) 1994; 44 Yoon (r24) 2003; 53 Park (r14) 2011; 61 Barrow (r1) 1993 Staley (r18) 1968; 95 Thompson (r20) 2006; 56 Hosoya (r7) 2009; 59 Yi (r21) 2004; 54 Lányí (r11) 1987; 19 Tamaoka (r19) 1984; 25 Bruns (r4) 2001; 51 Baumann (r2) 1981 Cohen-Bazire (r5) 1957; 49 Yoon (r22) 1996; 46 Yoon (r23) 1998; 48 |
References_xml | – volume: 2 start-page: 233 year: 1984 ident: r13 article-title: An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids publication-title: J Microbiol Methods doi: 10.1016/0167-7012(84)90018-6 contributor: fullname: Minnikin – volume: 19 start-page: 161 year: 1987 ident: r10 article-title: Lipid and cell wall analysis in bacterial systematics publication-title: Methods Microbiol doi: 10.1016/S0580-9517(08)70410-0 contributor: fullname: Komagata – volume: 51 start-page: 1283 year: 2001 ident: r12 article-title: Thalassomonas viridans gen. nov., sp. nov., a novel marine γ-proteobacterium publication-title: Int J Syst Evol Microbiol doi: 10.1099/00207713-51-4-1283 contributor: fullname: Macián – volume: 56 start-page: 365 year: 2006 ident: r20 article-title: Thalassomonas loyana sp. nov., a causative agent of the white plague-like disease of corals on the Eilat coral reef publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.63800-0 contributor: fullname: Thompson – volume: 64 start-page: 1378 year: 2014 ident: r15 article-title: Phaeobacter aquaemixtae sp. nov., isolated from the junction between the ocean and a freshwater spring publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.057646-0 contributor: fullname: Park – volume-title: Identification of bacteria by gas chromatography of cellular fatty acids year: 1990 ident: r16 contributor: fullname: Sasser – volume: 25 start-page: 125 year: 1984 ident: r19 article-title: Determination of DNA base composition by reverse-phase high-performance liquid chromatography publication-title: FEMS Microbiol Lett doi: 10.1111/j.1574-6968.1984.tb01388.x contributor: fullname: Tamaoka – volume: 105 start-page: 81 year: 2014 ident: r9 article-title: Thalassomonas fusca sp. nov., a novel gammaproteobacterium isolated from tidal flat sediment publication-title: Antonie van Leeuwenhoek doi: 10.1007/s10482-013-0055-6 contributor: fullname: Jung – volume: 61 start-page: 2573 year: 2011 ident: r14 article-title: Thalassomonas agariperforans sp. nov., an agarolytic bacterium isolated from marine sand publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.027821-0 contributor: fullname: Park – volume-title: Cowan and Steel’s Manual for the Identification of Medical Bacteria year: 1993 ident: r1 doi: 10.1017/CBO9780511527104 contributor: fullname: Barrow – start-page: 1302 volume-title: The Prokaryotes year: 1981 ident: r2 article-title: The marine Gram-negative eubacteria: genera Photobacterium, Beneckea, Alteromonas, Pseudomonas, and Alcaligenes contributor: fullname: Baumann – volume: 64 start-page: 1223 year: 2014 ident: r25 article-title: Description of Thalassotalea piscium gen. nov., sp. nov., isolated from flounder (Paralichthys olivaceus), reclassification of four species of the genus Thalassomonas as members of the genus Thalassotalea gen. nov. and emended description of the genus Thalassomonas publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.055913-0 contributor: fullname: Zhang – volume: 49 start-page: 25 year: 1957 ident: r5 article-title: Kinetic studies of pigment synthesis by nonsulfur purple bacteria publication-title: J Cell Comp Physiol doi: 10.1002/jcp.1030490104 contributor: fullname: Cohen-Bazire – volume: 19 start-page: 1 year: 1987 ident: r11 article-title: Classical and rapid identification methods for medically important bacteria publication-title: Methods Microbiol contributor: fullname: Lányí – volume: 59 start-page: 686 year: 2009 ident: r7 article-title: Thalassomonas actiniarum sp. nov. and Thalassomonas haliotis sp. nov., isolated from marine animals publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.000539-0 contributor: fullname: Hosoya – volume: 48 start-page: 187 year: 1998 ident: r23 article-title: Inter- and intraspecific phylogenetic analysis of the genus Nocardioides and related taxa based on 16S rDNA sequences publication-title: Int J Syst Bacteriol doi: 10.1099/00207713-48-1-187 contributor: fullname: Yoon – volume: 56 start-page: 1245 year: 2006 ident: r8 article-title: Thalassomonas agarivorans sp. nov., a marine agarolytic bacterium isolated from shallow coastal water of An-Ping Harbour, Taiwan, and emended description of the genus Thalassomonas publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.64130-0 contributor: fullname: Jean – volume: 46 start-page: 502 year: 1996 ident: r22 article-title: Identification of Saccharomonospora strains by the use of genomic DNA fragments and rRNA gene probes publication-title: Int J Syst Bacteriol doi: 10.1099/00207713-46-2-502 contributor: fullname: Yoon – volume: vol. 2 start-page: 443 volume-title: Bergey’s Manual of Systematic Bacteriology year: 2005 ident: r3 article-title: Order X. 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Chemical Methods in Prokaryotic Systematics year: 1994 ident: r6 article-title: Structural lipids of eubacteria contributor: fullname: Embley – volume: 54 start-page: 377 year: 2004 ident: r21 article-title: Thalassomonas ganghwensis sp. nov., isolated from tidal flat sediment publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.02748-0 contributor: fullname: Yi – volume: 95 start-page: 1921 year: 1968 ident: r18 article-title: Prosthecomicrobium and Ancalomicrobium: new prosthecate freshwater bacteria publication-title: J Bacteriol doi: 10.1128/JB.95.5.1921-1942.1968 contributor: fullname: Staley – volume: 51 start-page: 1997 year: 2001 ident: r4 article-title: Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment publication-title: Int J Syst Evol Microbiol doi: 10.1099/00207713-51-6-1997 contributor: fullname: Bruns – volume: 53 start-page: 53 year: 2003 ident: r24 article-title: Microbulbifer salipaludis sp. nov., a moderate halophile isolated from a Korean salt marsh publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.02342-0 contributor: fullname: Yoon |
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Snippet | A Gram-stain-negative, aerobic, non-flagellated and rod-shaped or ovoid bacterial strain, designated GJSW-36T, was isolated from seawater at Geoje island in... A Gram-stain-negative, aerobic, non-flagellated and rod-shaped or ovoid bacterial strain, designated GJSW-36(T), was isolated from seawater at Geoje island in... A Gram-stain-negative, aerobic, non-flagellated and rod-shaped or ovoid bacterial strain, designated GJSW-36 T , was isolated from seawater at Geoje island in... |
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SubjectTerms | Bacterial Typing Techniques Base Composition DNA DNA, Bacterial - genetics fatty acids Fatty Acids - chemistry Gammaproteobacteria - classification Gammaproteobacteria - genetics Gammaproteobacteria - isolation & purification microbiology Molecular Sequence Data nucleotide sequences phosphatidylethanolamines Phosphatidylethanolamines - chemistry Phosphatidylglycerols - chemistry Phylogeny Republic of Korea ribosomal RNA RNA, Ribosomal, 16S - genetics seawater Seawater - microbiology Sequence Analysis, DNA sequence homology sodium chloride taxonomic revisions Thalassomonas Ubiquinone - chemistry ubiquinones |
Title | Thalassotalea ponticola sp. nov., isolated from seawater, reclassification of Thalassomonas fusca as Thalassotalea fusca comb. nov. and emended description of the genus Thalassotalea |
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