LINE-1 amplification accompanies explosive genome repatterning in rodents
Transposable elements (TEs) sometimes induce karyotypic changes following recombination, breakage and rearrangement. We used FISH and Southern blot analyses to investigate the amount and distribution of LINE-1 retrotransposons in rodents (genus Taterillus, Muridae, Gerbillinae) that have recently un...
Saved in:
| Published in | Chromosome research Vol. 12; no. 8; pp. 787 - 793 |
|---|---|
| Main Authors | , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
Netherlands
Springer Nature B.V
01.12.2004
|
| Subjects | |
| Online Access | Get full text |
Cover
Loading…
| Abstract | Transposable elements (TEs) sometimes induce karyotypic changes following recombination, breakage and rearrangement. We used FISH and Southern blot analyses to investigate the amount and distribution of LINE-1 retrotransposons in rodents (genus Taterillus, Muridae, Gerbillinae) that have recently undergone an important genome repatterning. Our results were interpreted in a known phylogenetic framework and clearly showed that LINE-1 elements were greatly amplified and non-randomly distributed in the most rearranged karyotypes. A comparison between FISH and conventional banding patterns provided evidence that LINE-1 insertion sites and chromosome breakpoints were not strongly correlated, thus suggesting that LINE-1 amplification subsequently accompanied Taterillus chromosome evolution. Similar patterns are observed in some cases of genomic stresses (hybrid genomes, cancer and DNA-damaged cells) and usually associated with DNA hypomethylation. We propose that intensively repatterned genomes face transient stress phases during which some epigenetic features, such as DNA methylation, are relaxed, thus allowing TE amplification. |
|---|---|
| AbstractList | Transposable elements (TEs) sometimes induce karyotypic changes following recombination, breakage and rearrangement. We used FISH and Southern blot analyses to investigate the amount and distribution of LINE-1 retrotransposons in rodents (genus Taterillus, Muridae, Gerbillinae) that have recently undergone an important genome repatterning. Our results were interpreted in a known phylogenetic framework and clearly showed that LINE-1 elements were greatly amplified and non-randomly distributed in the most rearranged karyotypes. A comparison between FISH and conventional banding patterns provided evidence that LINE-1 insertion sites and chromosome breakpoints were not strongly correlated, thus suggesting that LINE-1 amplification subsequently accompanied Taterillus chromosome evolution. Similar patterns are observed in some cases of genomic stresses (hybrid genomes, cancer and DNA-damaged cells) and usually associated with DNA hypomethylation. We propose that intensively repatterned genomes face transient stress phases during which some epigenetic features, such as DNA methylation, are relaxed, thus allowing TE amplification.[PUBLICATION ABSTRACT] Transposable elements (TEs) sometimes induce karyotypic changes following recombination, breakage and rearrangement. We used FISH and Southern blot analyses to investigate the amount and distribution of LINE-1 retrotransposons in rodents (genus Taterillus, Muridae, Gerbillinae) that have recently undergone an important genome repatterning. Our results were interpreted in a known phylogenetic framework and clearly showed that LINE-1 elements were greatly amplified and non-randomly distributed in the most rearranged karyotypes. A comparison between FISH and conventional banding patterns provided evidence that LINE-1 insertion sites and chromosome breakpoints were not strongly correlated, thus suggesting that LINE-1 amplification subsequently accompanied Taterillus chromosome evolution. Similar patterns are observed in some cases of genomic stresses (hybrid genomes, cancer and DNA-damaged cells) and usually associated with DNA hypomethylation. We propose that intensively repatterned genomes face transient stress phases during which some epigenetic features, such as DNA methylation, are relaxed, thus allowing TE amplification. |
| Author | Volobouev, Vitaly Waters, Paul D Dobigny, Gauthier Ozouf-Costaz, Catherine Bonillo, Céline Coutanceau, Jean-Pierre |
| Author_xml | – sequence: 1 givenname: Gauthier surname: Dobigny fullname: Dobigny, Gauthier email: dobigny@sun.ac.za organization: Laboratoire Origine, Structure et Evolution de la Biodiversité, Muséum National d'Histoire Naturelle, 55, rue Buffon, F75005, Paris, France. dobigny@sun.ac.za – sequence: 2 givenname: Catherine surname: Ozouf-Costaz fullname: Ozouf-Costaz, Catherine – sequence: 3 givenname: Paul D surname: Waters fullname: Waters, Paul D – sequence: 4 givenname: Céline surname: Bonillo fullname: Bonillo, Céline – sequence: 5 givenname: Jean-Pierre surname: Coutanceau fullname: Coutanceau, Jean-Pierre – sequence: 6 givenname: Vitaly surname: Volobouev fullname: Volobouev, Vitaly |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/15702417$$D View this record in MEDLINE/PubMed |
| BookMark | eNqFkU1LxDAQhoMo7of-AC9SPHiLJs1Xe5Rl1YVFL3oOMZ1IpE1q0hX331vdBcGLp5mB532ZmXeGDkMMgNAZJVeUEHWdKRFKYUIEFqUUeHuAplQohmXF60M0JbVUmI39BM1yfiOEVIzTYzQZIVJyqqZotV49LDEtTNe33nlrBh9DYayNXW-Ch1zAZ9_G7D-geIUQOygS9GYYIAUfXgsfihQbCEM-QUfOtBlO93WOnm-XT4t7vH68Wy1u1tgyoQZcOWVqUjpLa14ZKkvLa2oMd66mQLkVrrHSSGgUF0w6xl9I2TRunCWXvGJsji53vn2K7xvIg-58ttC2JkDcZC1VySui-L_guADnTMkRvPgDvsVNCuMRWgkiZMl-3OgOsinmnMDpPvnOpK2mRH-noXdp6DEN_Z2G3o6a873x5qWD5lexfz_7Ah6yhsI |
| CitedBy_id | crossref_primary_10_1007_s10577_008_9004_z crossref_primary_10_1007_s10577_017_9565_9 crossref_primary_10_1155_2017_5935380 crossref_primary_10_1007_s13258_013_0095_3 crossref_primary_10_4236_jct_2022_136031 crossref_primary_10_1186_1471_2164_7_194 crossref_primary_10_1186_s13100_018_0117_4 crossref_primary_10_1007_s10709_005_8008_2 crossref_primary_10_26508_lsa_202101104 crossref_primary_10_3897_CompCytogen_v11i4_14562 crossref_primary_10_1111_j_1558_5646_2011_01258_x crossref_primary_10_3390_genes11070827 crossref_primary_10_1007_s10577_006_1034_9 crossref_primary_10_1007_s10577_006_1080_3 crossref_primary_10_1007_s10577_010_9113_3 crossref_primary_10_1534_genetics_107_082313 crossref_primary_10_1016_j_micron_2007_07_002 crossref_primary_10_1186_s12864_015_1830_8 crossref_primary_10_1371_journal_pone_0049358 crossref_primary_10_1089_zeb_2017_1484 crossref_primary_10_14712_23362936_2016_4 crossref_primary_10_1111_jzs_12536 crossref_primary_10_1007_s12041_015_0595_9 crossref_primary_10_1016_j_gene_2010_01_003 crossref_primary_10_1007_s10577_008_1253_3 crossref_primary_10_3390_ani12162091 crossref_primary_10_1038_sj_hdy_6800730 crossref_primary_10_1007_s10577_015_9493_5 |
| Cites_doi | 10.1086/341963 10.1093/hmg/7.1.1 10.1016/S0168-9525(97)01181-5 10.1078/1616-5047-00098 10.1073/pnas.210386297 10.1023/A:1016072014259 10.1073/pnas.87.23.9481 10.1002/1097-0142(19940501)73:9<2333::AID-CNCR2820730915>3.0.CO;2-4 10.1016/S0959-437X(98)80092-0 10.1159/000134455 10.1093/oxfordjournals.molbev.a040192 10.1007/s00412-002-0203-7 10.1093/genetics/138.1.1 10.1073/pnas.93.18.9374 10.1093/jn/132.8.2424S 10.1126/science.1063852 10.1007/s00412-004-0292-6 10.1038/35001608 10.1038/29889 10.1023/A:1009294226213 10.1016/S0140-6736(71)90287-X 10.1093/hmg/ddg268 10.1038/ng1223 10.1016/S0168-9525(01)02445-3 10.1016/0014-4827(72)90558-7 10.1006/viro.2000.0732 10.2165/00129785-200202010-00003 10.1074/jbc.273.2.891 10.1016/S0169-5347(99)01817-0 10.1101/gr.174001 10.1023/A:1024105726123 10.1016/S0304-3835(02)00511-6 10.1016/S0092-8674(02)00868-1 10.1146/annurev.genet.35.102401.091032 10.1038/371215a0 10.1016/S0168-9525(00)02104-1 10.1016/j.tig.2003.08.004 10.1073/pnas.87.19.7757 10.1016/0092-8674(88)90159-6 10.1098/rspb.1998.0412 10.1093/genetics/153.3.1403 10.1073/pnas.97.12.6248 10.1093/oxfordjournals.jhered.a111106 10.1038/nature02886 10.1007/s00412-004-0301-9 10.1159/000063044 10.1093/oxfordjournals.molbev.a003801 10.1038/35057062 10.1016/0092-8674(93)90318-K 10.1038/29985 10.1007/BF01435247 10.1038/43607 10.1093/hmg/11.20.2479 |
| ContentType | Journal Article |
| Copyright | Kluwer Academic Publishers 2004 |
| Copyright_xml | – notice: Kluwer Academic Publishers 2004 |
| DBID | CGR CUY CVF ECM EIF NPM AAYXX CITATION 3V. 7TM 7X7 7XB 88A 88E 88I 8AO 8FD 8FE 8FH 8FI 8FJ 8FK ABUWG AFKRA AZQEC BBNVY BENPR BHPHI CCPQU DWQXO FR3 FYUFA GHDGH GNUQQ HCIFZ K9. LK8 M0S M1P M2P M7P P64 PQEST PQQKQ PQUKI PRINS Q9U RC3 7X8 |
| DOI | 10.1007/s10577-005-5265-y |
| DatabaseName | Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed CrossRef ProQuest Central (Corporate) Nucleic Acids Abstracts Health & Medical Collection (Proquest) ProQuest Central (purchase pre-March 2016) Biology Database (Alumni Edition) Medical Database (Alumni Edition) Science Database (Alumni Edition) ProQuest Pharma Collection Technology Research Database ProQuest SciTech Collection ProQuest Natural Science Collection Hospital Premium Collection Hospital Premium Collection (Alumni Edition) ProQuest Central (Alumni) (purchase pre-March 2016) ProQuest Central (Alumni) ProQuest Central UK/Ireland ProQuest Central Essentials Biological Science Collection ProQuest Central ProQuest Natural Science Collection ProQuest One Community College ProQuest Central Korea Engineering Research Database Health Research Premium Collection Health Research Premium Collection (Alumni) ProQuest Central Student SciTech Premium Collection ProQuest Health & Medical Complete (Alumni) Biological Sciences Health & Medical Collection (Alumni Edition) PML(ProQuest Medical Library) Science Database (ProQuest) Biological Science Database Biotechnology and BioEngineering Abstracts ProQuest One Academic Eastern Edition (DO NOT USE) ProQuest One Academic ProQuest One Academic UKI Edition ProQuest Central China ProQuest Central Basic Genetics Abstracts MEDLINE - Academic |
| DatabaseTitle | MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) CrossRef ProQuest Central Student Technology Research Database ProQuest Central Essentials Nucleic Acids Abstracts ProQuest Health & Medical Complete (Alumni) ProQuest Central (Alumni Edition) SciTech Premium Collection ProQuest One Community College ProQuest Natural Science Collection ProQuest Pharma Collection ProQuest Central China ProQuest Biology Journals (Alumni Edition) ProQuest Central Genetics Abstracts Health Research Premium Collection Health and Medicine Complete (Alumni Edition) Natural Science Collection ProQuest Central Korea Biological Science Collection ProQuest Medical Library (Alumni) ProQuest Science Journals (Alumni Edition) ProQuest Biological Science Collection ProQuest Central Basic ProQuest Science Journals ProQuest One Academic Eastern Edition ProQuest Hospital Collection Health Research Premium Collection (Alumni) Biological Science Database ProQuest SciTech Collection ProQuest Hospital Collection (Alumni) Biotechnology and BioEngineering Abstracts ProQuest Health & Medical Complete ProQuest Medical Library ProQuest One Academic UKI Edition Engineering Research Database ProQuest One Academic ProQuest Central (Alumni) MEDLINE - Academic |
| DatabaseTitleList | ProQuest Central Student MEDLINE MEDLINE - Academic Genetics Abstracts |
| Database_xml | – sequence: 1 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 2 dbid: EIF name: MEDLINE url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search sourceTypes: Index Database – sequence: 3 dbid: BENPR name: ProQuest Central url: https://www.proquest.com/central sourceTypes: Aggregation Database |
| DeliveryMethod | fulltext_linktorsrc |
| Discipline | Chemistry Biology |
| EISSN | 1573-6849 |
| EndPage | 793 |
| ExternalDocumentID | 2138286201 10_1007_s10577_005_5265_y 15702417 |
| Genre | Journal Article |
| GroupedDBID | --- -4W -56 -5G -BR -EM -Y2 -~C .86 .VR 06C 06D 0R~ 0VY 1N0 1SB 2.D 203 28- 29B 29~ 2J2 2JN 2JY 2KG 2KM 2LR 2P1 2VQ 2~H 30V 3SX 3V. 4.4 406 408 409 40D 40E 53G 5GY 5QI 5VS 67N 67Z 6NX 7X7 88A 88E 88I 8AO 8FE 8FH 8FI 8FJ 8TC 8UJ 95- 95. 95~ 96X AAAVM AABHQ AACDK AAEOY AAHBH AAHNG AAIAL AAJBT AAJKR AANXM AANZL AAQLM AARHV AARTL AASML AATNV AATVU AAUYE AAWCG AAYIU AAYQN AAYTO AAYZH ABAKF ABBBX ABBXA ABDZT ABECU ABFTV ABHLI ABHQN ABJNI ABJOX ABKCH ABKTR ABMNI ABMQK ABNWP ABPLI ABQBU ABSXP ABTEG ABTHY ABTKH ABTMW ABULA ABUWG ABWNU ABXPI ACAOD ACBXY ACDTI ACGFS ACGOD ACHSB ACHXU ACIPQ ACKNC ACMDZ ACMLO ACOKC ACOMO ACPRK ACZOJ ADBBV ADHHG ADHIR ADIMF ADINQ ADKNI ADKPE ADRFC ADTPH ADURQ ADYFF ADYPR ADZKW AEBTG AEFIE AEFQL AEGAL AEGNC AEJHL AEJRE AEKMD AEMSY AENEX AEOHA AEPYU AESKC AETLH AEVLU AEXYK AFBBN AFEXP AFGCZ AFKRA AFLOW AFQWF AFWTZ AFZKB AGAYW AGDGC AGGDS AGJBK AGMZJ AGQEE AGQMX AGRTI AGWIL AGWZB AGYKE AHAVH AHBYD AHKAY AHMBA AHSBF AHYZX AIAKS AIGIU AIIXL AILAN AITGF AJBLW AJRNO AJZVZ AKMHD ALIPV ALMA_UNASSIGNED_HOLDINGS ALWAN AMKLP AMXSW AMYLF AMYQR AOCGG ARMRJ ASPBG AVWKF AXYYD AZFZN AZQEC B-. BA0 BBNVY BBWZM BDATZ BENPR BGNMA BHPHI BPHCQ BVXVI CAG CCPQU CGR COF CS3 CSCUP CUY CVF DDRTE DL5 DNIVK DPUIP DU5 DWQXO EBD EBLON EBS ECM EIF EIOEI EJD EMOBN EN4 EPAXT ESBYG F5P FEDTE FERAY FFXSO FIGPU FINBP FNLPD FRRFC FSGXE FWDCC FYUFA G-Y G-Z GGCAI GGRSB GJIRD GNUQQ GNWQR GQ6 GQ7 GQ8 GXS H13 HCIFZ HF~ HG5 HG6 HMCUK HMJXF HQYDN HRMNR HVGLF HZ~ I09 IHE IJ- IKXTQ ITM IWAJR IXC IZIGR IZQ I~X I~Z J-C J0Z JBSCW JCJTX JZLTJ KDC KOV KOW KPH LAK LK8 LLZTM M0L M1P M2P M4Y M7P MA- N2Q NB0 NDZJH NPM NPVJJ NQJWS NU0 O9- O93 O9G O9I O9J OAM OVD P19 PF0 PQQKQ PROAC PSQYO PT4 PT5 Q2X QOK QOR QOS R4E R89 R9I RHV RNI ROL RPX RRX RSV RZC RZE RZK S16 S1Z S26 S27 S28 S3A S3B SAP SBL SBY SCLPG SDH SDM SHX SISQX SJYHP SNE SNPRN SNX SOHCF SOJ SPISZ SRMVM SSLCW SSXJD STPWE SV3 SZN T13 T16 TEORI TSG TSK TSV TUC U2A U9L UG4 UKHRP UOJIU UTJUX UZXMN VC2 VFIZW W23 W48 WJK WK6 WK8 YLTOR Z45 Z7U Z82 Z8V ZMTXR ZOVNA ~A9 ~EX ~KM AAYXX ADOAH CITATION 7TM 7XB 8FD 8FK FR3 K9. P64 PQEST PQUKI PRINS Q9U RC3 ABFGW ACWMK AESTI AEVTX AIMYW AKQUC UNUBA 7X8 |
| ID | FETCH-LOGICAL-c357t-8f7a902fc1948a162c491aa4ff91e14c5fdc6a6ed74536f34b02ddfed76464833 |
| IEDL.DBID | 7X7 |
| ISSN | 0967-3849 |
| IngestDate | Fri Aug 16 03:51:26 EDT 2024 Thu Aug 15 23:45:00 EDT 2024 Thu Oct 10 15:21:38 EDT 2024 Thu Sep 12 20:04:37 EDT 2024 Tue Oct 15 23:29:25 EDT 2024 |
| IsPeerReviewed | true |
| IsScholarly | true |
| Issue | 8 |
| Language | English |
| LinkModel | DirectLink |
| MergedId | FETCHMERGED-LOGICAL-c357t-8f7a902fc1948a162c491aa4ff91e14c5fdc6a6ed74536f34b02ddfed76464833 |
| Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
| PMID | 15702417 |
| PQID | 750562374 |
| PQPubID | 54106 |
| PageCount | 7 |
| ParticipantIDs | proquest_miscellaneous_67248074 proquest_miscellaneous_19444376 proquest_journals_750562374 crossref_primary_10_1007_s10577_005_5265_y pubmed_primary_15702417 |
| PublicationCentury | 2000 |
| PublicationDate | 2004-12-01 |
| PublicationDateYYYYMMDD | 2004-12-01 |
| PublicationDate_xml | – month: 12 year: 2004 text: 2004-12-01 day: 01 |
| PublicationDecade | 2000 |
| PublicationPlace | Netherlands |
| PublicationPlace_xml | – name: Netherlands – name: Dordrecht |
| PublicationTitle | Chromosome research |
| PublicationTitleAlternate | Chromosome Res |
| PublicationYear | 2004 |
| Publisher | Springer Nature B.V |
| Publisher_xml | – name: Springer Nature B.V |
| References | 10545468 - Genetics. 1999 Nov;153(3):1403-10 3365767 - Cell. 1988 May 6;53(3):391-400 7877498 - Mol Biol Evol. 1995 Jan;12(1):73-82 4117921 - Exp Cell Res. 1972 Nov;75(1):304-6 9699308 - Proc Biol Sci. 1998 Jul 7;265(1402):1157-9 8078581 - Nature. 1994 Sep 15;371(6494):215-20 10841528 - Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6248-9 10675923 - Trends Ecol Evol. 2000 Mar;15(3):95-99 12897783 - Nat Genet. 2003 Sep;35(1):41-8 12163705 - J Nutr. 2002 Aug;132(8 Suppl):2424S-2429S 12188048 - Genetica. 2002 May;115(1):49-63 9690999 - Curr Opin Genet Dev. 1998 Jun;8(3):343-50 15243753 - Chromosoma. 2004 Aug;113(1):34-41 8168038 - Cancer. 1994 May 1;73(9):2333-6 12355206 - Chromosoma. 2002 Sep;111(3):170-5 1312702 - Oncogene. 1992 Mar;7(3):507-10 12438787 - Cytogenet Genome Res. 2002;96(1-4):117-24 11016976 - Proc Natl Acad Sci U S A. 2000 Oct 10;97(21):11337-42 11117360 - Chromosome Res. 2000;8(7):635-43 11483576 - Genome Res. 2001 Aug;11(8):1353-64 12351584 - Hum Mol Genet. 2002 Oct 1;11(20):2479-88 9422746 - J Biol Chem. 1998 Jan 9;273(2):891-7 11672845 - Trends Genet. 2001 Nov;17(11):619-21 11158386 - Mol Biol Evol. 2001 Feb;18(2):266-70 9590690 - Nature. 1998 May 7;393(6680):68-72 7939905 - Soc Gen Physiol Ser. 1994;49:69-83 2251288 - Proc Natl Acad Sci U S A. 1990 Dec;87(23):9481-5 14550626 - Trends Genet. 2003 Oct;19(10):530-6 10490019 - Nature. 1999 Sep 9;401(6749):131-2 8790336 - Proc Natl Acad Sci U S A. 1996 Sep 3;93(18):9374-7 8995488 - Cytogenet Cell Genet. 1996;75(1):45-8 12083952 - Am J Pharmacogenomics. 2002;2(1):25-35 11162824 - Virology. 2001 Feb 1;280(1):107-14 11498573 - Science. 2001 Aug 10;293(5532):1068-70 10693809 - Nature. 2000 Feb 17;403(6771):785-9 9384598 - Hum Mol Genet. 1998 Jan;7(1):1-11 12868608 - Genetica. 2003 Jul;118(2-3):183-91 12094327 - Am J Hum Genet. 2002 Aug;71(2):375-88 12565166 - Cancer Lett. 2003 Feb 20;190(2):125-33 12925568 - Hum Mol Genet. 2003 Oct 1;12(19):2559-67 7813912 - Genetica. 1994;93(1-3):149-60 8001776 - Genetics. 1994 Sep;138(1):1-5 12176313 - Cell. 2002 Aug 9;110(3):277-80 11237011 - Nature. 2001 Feb 15;409(6822):860-921 9590685 - Nature. 1998 May 7;393(6680):22-3 15338236 - Chromosoma. 2004 Sep;113(3):137-44 11700292 - Annu Rev Genet. 2001;35:501-38 1658126 - J Hered. 1991 Sep-Oct;82(5):369-77 15318244 - Nature. 2004 Sep 2;431(7004):96-9 11050333 - Trends Genet. 2000 Oct;16(10):461-8 9260521 - Trends Genet. 1997 Aug;13(8):335-40 2170987 - Proc Natl Acad Sci U S A. 1990 Oct;87(19):7757-61 8261510 - Cell. 1993 Dec 17;75(6):1083-93 4107917 - Lancet. 1971 Oct 30;2(7731):971-2 RJW O’Neill (5265_CR38) 1998; 393 V Ladevèze (5265_CR30) 1998; 265 GL Bratthauer (5265_CR6) 1994; 73 CR Hagan (5265_CR19) 2002; 2 G Dobigny (5265_CR15) 2004; 113 KP Nephew (5265_CR37) 2003; 190 MG Kidwell (5265_CR27) 1998; 393 C Plass (5265_CR41) 2002; 11 TJ Robinson (5265_CR42) 2000; 8 L Boyle (5265_CR4) 1990; 87 RS Hansen (5265_CR20) 2003; 12 C Arnault (5265_CR1) 1994; 93 PD Waters (5265_CR53) 2004; 113 G Dobigny (5265_CR13) 2002; 96 GL Bratthauer (5265_CR5) 1992; 7 M Dewannieux (5265_CR11) 2003; 35 V Volobouev (5265_CR52) 1996; 75 MG Kidwell (5265_CR28) 2000; 15 MF Lyon (5265_CR34) 2000; 97 G Dobigny (5265_CR14) 2003; 68 K Usdin (5265_CR49) 1995; 12 A Nekrutenko (5265_CR36) 2001; 17 DF Callen (5265_CR9) 2002; 111 I Tanaka (5265_CR48) 2001; 280 M Caceres (5265_CR8) 2001; 11 AC Spradling (5265_CR46) 1994; 49 RJ Britten (5265_CR7) 1996; 93 H Kehrer-Sawatzki (5265_CR25) 2002; 71 EM Ostertag (5265_CR39) 2001; 35 AT Sumner (5265_CR47) 1972; 75 A Lorenc (5265_CR33) 2003; 118 ES Lander (5265_CR31) 2001; 409 5265_CR2 YHM Gray (5265_CR18) 2000; 16 J Zhang (5265_CR57) 1999; 13 I Roemer (5265_CR43) 1999; 401 JA Yoder (5265_CR56) 1997; 13 S Henikoff (5265_CR21) 1994; 138 M Seabright (5265_CR45) 1971; 2 S Mi (5265_CR35) 2000; 403 G Dobigny (5265_CR12) 2002 HHJ Kazazian (5265_CR23) 1998; 8 JN Volff (5265_CR51) 2001; 18 MB Evgen’ev (5265_CR17) 2000; 97 HA Wichman (5265_CR54) 1991; 82 MG Kidwell (5265_CR26) 2002; 115 PA Jones (5265_CR22) 2001; 293 AD Schwartz (5265_CR44) 1998; 7 B Charlesworth (5265_CR10) 1994; 371 M Ehrlich (5265_CR16) 2002; 132 E Pascale (5265_CR40) 1990; 87 D Bourc’his (5265_CR3) 2004; 431 Z Yang (5265_CR55) 1998; 273 HHJ Kazazian (5265_CR24) 2002; 110 JR Korenberg (5265_CR29) 1988; 53 RW Levis (5265_CR32) 1993; 75 LN Lagemaat Van de (5265_CR50) 2003; 19 |
| References_xml | – volume: 71 start-page: 375 year: 2002 ident: 5265_CR25 publication-title: Am J Hum Genet doi: 10.1086/341963 contributor: fullname: H Kehrer-Sawatzki – volume: 7 start-page: 1 year: 1998 ident: 5265_CR44 publication-title: Hum Mol Genet doi: 10.1093/hmg/7.1.1 contributor: fullname: AD Schwartz – volume: 13 start-page: 335 year: 1997 ident: 5265_CR56 publication-title: TIG doi: 10.1016/S0168-9525(97)01181-5 contributor: fullname: JA Yoder – volume: 68 start-page: 299 year: 2003 ident: 5265_CR14 publication-title: Mammal Biol doi: 10.1078/1616-5047-00098 contributor: fullname: G Dobigny – volume: 97 start-page: 11337 year: 2000 ident: 5265_CR17 publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.210386297 contributor: fullname: MB Evgen’ev – volume: 115 start-page: 49 year: 2002 ident: 5265_CR26 publication-title: Genetica doi: 10.1023/A:1016072014259 contributor: fullname: MG Kidwell – volume: 87 start-page: 9481 year: 1990 ident: 5265_CR40 publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.87.23.9481 contributor: fullname: E Pascale – volume: 73 start-page: 2332 year: 1994 ident: 5265_CR6 publication-title: Cancer doi: 10.1002/1097-0142(19940501)73:9<2333::AID-CNCR2820730915>3.0.CO;2-4 contributor: fullname: GL Bratthauer – volume: 8 start-page: 343 year: 1998 ident: 5265_CR23 publication-title: Curr Opin Gen Dev doi: 10.1016/S0959-437X(98)80092-0 contributor: fullname: HHJ Kazazian – volume: 75 start-page: 45 year: 1996 ident: 5265_CR52 publication-title: Cytogenet Cell Genet doi: 10.1159/000134455 contributor: fullname: V Volobouev – volume: 12 start-page: 73 year: 1995 ident: 5265_CR49 publication-title: Mol Biol Evol doi: 10.1093/oxfordjournals.molbev.a040192 contributor: fullname: K Usdin – volume: 111 start-page: 170 year: 2002 ident: 5265_CR9 publication-title: Chromosoma doi: 10.1007/s00412-002-0203-7 contributor: fullname: DF Callen – volume: 138 start-page: 1 year: 1994 ident: 5265_CR21 publication-title: Genetics doi: 10.1093/genetics/138.1.1 contributor: fullname: S Henikoff – volume: 93 start-page: 9374 year: 1996 ident: 5265_CR7 publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.93.18.9374 contributor: fullname: RJ Britten – volume: 7 start-page: 507 year: 1992 ident: 5265_CR5 publication-title: Oncogene contributor: fullname: GL Bratthauer – volume: 132 start-page: 2424S year: 2002 ident: 5265_CR16 publication-title: J Nutr doi: 10.1093/jn/132.8.2424S contributor: fullname: M Ehrlich – volume: 293 start-page: 1068 year: 2001 ident: 5265_CR22 publication-title: Science doi: 10.1126/science.1063852 contributor: fullname: PA Jones – volume: 113 start-page: 34 year: 2004 ident: 5265_CR15 publication-title: Chromosoma doi: 10.1007/s00412-004-0292-6 contributor: fullname: G Dobigny – volume: 403 start-page: 785 year: 2000 ident: 5265_CR35 publication-title: Nature doi: 10.1038/35001608 contributor: fullname: S Mi – volume: 393 start-page: 22 year: 1998 ident: 5265_CR27 publication-title: Nature doi: 10.1038/29889 contributor: fullname: MG Kidwell – volume: 8 start-page: 635 year: 2000 ident: 5265_CR42 publication-title: Chromosome Res doi: 10.1023/A:1009294226213 contributor: fullname: TJ Robinson – volume: 2 start-page: 971 year: 1971 ident: 5265_CR45 publication-title: Lancet doi: 10.1016/S0140-6736(71)90287-X contributor: fullname: M Seabright – volume: 12 start-page: 2559 year: 2003 ident: 5265_CR20 publication-title: Hum Mol Genet doi: 10.1093/hmg/ddg268 contributor: fullname: RS Hansen – volume: 49 start-page: 69 year: 1994 ident: 5265_CR46 publication-title: Soc Gen Physiol Ser contributor: fullname: AC Spradling – volume: 35 start-page: 41 year: 2003 ident: 5265_CR11 publication-title: Nature Genet doi: 10.1038/ng1223 contributor: fullname: M Dewannieux – volume: 17 start-page: 619 year: 2001 ident: 5265_CR36 publication-title: TIG doi: 10.1016/S0168-9525(01)02445-3 contributor: fullname: A Nekrutenko – volume: 75 start-page: 304 year: 1972 ident: 5265_CR47 publication-title: Exp Cell Res doi: 10.1016/0014-4827(72)90558-7 contributor: fullname: AT Sumner – volume: 280 start-page: 107 year: 2001 ident: 5265_CR48 publication-title: Virology doi: 10.1006/viro.2000.0732 contributor: fullname: I Tanaka – volume: 2 start-page: 25 year: 2002 ident: 5265_CR19 publication-title: Am J Pharmacogenomics doi: 10.2165/00129785-200202010-00003 contributor: fullname: CR Hagan – volume: 273 start-page: 891 year: 1998 ident: 5265_CR55 publication-title: J Biol Chem doi: 10.1074/jbc.273.2.891 contributor: fullname: Z Yang – volume: 15 start-page: 95 year: 2000 ident: 5265_CR28 publication-title: Trends Ecol Evol doi: 10.1016/S0169-5347(99)01817-0 contributor: fullname: MG Kidwell – volume: 11 start-page: 1353 year: 2001 ident: 5265_CR8 publication-title: Genome Res doi: 10.1101/gr.174001 contributor: fullname: M Caceres – volume: 118 start-page: 183 year: 2003 ident: 5265_CR33 publication-title: Genetica doi: 10.1023/A:1024105726123 contributor: fullname: A Lorenc – volume-title: Spéciation Chromosomique chez les Espèces Jumelles Ouest-Africaines du Genre Taterillus (Rodentia, Gerbillinae): Implications Systématiques et Biogéographiques, Hypothèses Génomiques year: 2002 ident: 5265_CR12 contributor: fullname: G Dobigny – volume: 190 start-page: 125 year: 2003 ident: 5265_CR37 publication-title: Cancer Lett doi: 10.1016/S0304-3835(02)00511-6 contributor: fullname: KP Nephew – volume: 110 start-page: 277 year: 2002 ident: 5265_CR24 publication-title: Cell doi: 10.1016/S0092-8674(02)00868-1 contributor: fullname: HHJ Kazazian – ident: 5265_CR2 – volume: 35 start-page: 501 year: 2001 ident: 5265_CR39 publication-title: Ann Rev Genet doi: 10.1146/annurev.genet.35.102401.091032 contributor: fullname: EM Ostertag – volume: 371 start-page: 215 year: 1994 ident: 5265_CR10 publication-title: Nature doi: 10.1038/371215a0 contributor: fullname: B Charlesworth – volume: 16 start-page: 461 year: 2000 ident: 5265_CR18 publication-title: Trends Genet doi: 10.1016/S0168-9525(00)02104-1 contributor: fullname: YHM Gray – volume: 19 start-page: 530 year: 2003 ident: 5265_CR50 publication-title: TIG doi: 10.1016/j.tig.2003.08.004 contributor: fullname: LN Lagemaat Van de – volume: 87 start-page: 7757 year: 1990 ident: 5265_CR4 publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.87.19.7757 contributor: fullname: L Boyle – volume: 53 start-page: 391 year: 1988 ident: 5265_CR29 publication-title: Cell doi: 10.1016/0092-8674(88)90159-6 contributor: fullname: JR Korenberg – volume: 265 start-page: 1157 year: 1998 ident: 5265_CR30 publication-title: Proc R Soc Lond doi: 10.1098/rspb.1998.0412 contributor: fullname: V Ladevèze – volume: 13 start-page: 1403 year: 1999 ident: 5265_CR57 publication-title: Genetics doi: 10.1093/genetics/153.3.1403 contributor: fullname: J Zhang – volume: 97 start-page: 6248 year: 2000 ident: 5265_CR34 publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.97.12.6248 contributor: fullname: MF Lyon – volume: 82 start-page: 369 year: 1991 ident: 5265_CR54 publication-title: J Hered doi: 10.1093/oxfordjournals.jhered.a111106 contributor: fullname: HA Wichman – volume: 431 start-page: 96 year: 2004 ident: 5265_CR3 publication-title: Nature doi: 10.1038/nature02886 contributor: fullname: D Bourc’his – volume: 113 start-page: 137 year: 2004 ident: 5265_CR53 publication-title: Chromosoma doi: 10.1007/s00412-004-0301-9 contributor: fullname: PD Waters – volume: 96 start-page: 117 year: 2002 ident: 5265_CR13 publication-title: Cytogenet Genome Res doi: 10.1159/000063044 contributor: fullname: G Dobigny – volume: 18 start-page: 266 year: 2001 ident: 5265_CR51 publication-title: Mol Biol Evol doi: 10.1093/oxfordjournals.molbev.a003801 contributor: fullname: JN Volff – volume: 409 start-page: 860 year: 2001 ident: 5265_CR31 publication-title: Nature doi: 10.1038/35057062 contributor: fullname: ES Lander – volume: 75 start-page: 1083 year: 1993 ident: 5265_CR32 publication-title: Cell doi: 10.1016/0092-8674(93)90318-K contributor: fullname: RW Levis – volume: 393 start-page: 68 year: 1998 ident: 5265_CR38 publication-title: Nature doi: 10.1038/29985 contributor: fullname: RJW O’Neill – volume: 93 start-page: 149 year: 1994 ident: 5265_CR1 publication-title: Genetica doi: 10.1007/BF01435247 contributor: fullname: C Arnault – volume: 401 start-page: 131 year: 1999 ident: 5265_CR43 publication-title: Nature doi: 10.1038/43607 contributor: fullname: I Roemer – volume: 11 start-page: 2479 year: 2002 ident: 5265_CR41 publication-title: Hum Mol Genet doi: 10.1093/hmg/11.20.2479 contributor: fullname: C Plass |
| SSID | ssj0008341 |
| Score | 1.899195 |
| Snippet | Transposable elements (TEs) sometimes induce karyotypic changes following recombination, breakage and rearrangement. We used FISH and Southern blot analyses to... |
| SourceID | proquest crossref pubmed |
| SourceType | Aggregation Database Index Database |
| StartPage | 787 |
| SubjectTerms | Animals Blotting, Southern Chromosomes, Mammalian - genetics Deoxyribonucleic acid DNA DNA methylation DNA Transposable Elements - genetics Genetics Genome Gerbillinae - genetics In Situ Hybridization, Fluorescence Karyotyping Long Interspersed Nucleotide Elements - genetics Muridae Nucleic Acid Amplification Techniques Phylogeny |
| Title | LINE-1 amplification accompanies explosive genome repatterning in rodents |
| URI | https://www.ncbi.nlm.nih.gov/pubmed/15702417 https://www.proquest.com/docview/750562374 https://search.proquest.com/docview/19444376 https://search.proquest.com/docview/67248074 |
| Volume | 12 |
| hasFullText | 1 |
| inHoldings | 1 |
| isFullTextHit | |
| isPrint | |
| link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1LT8MwDLZ4CMEFwXiNx8iBE1JE06ZJe0IMbWIIJoRA2q3K0kTiQAdsHPbvsfvYxAFOVR9KWyexv8SfbYCLGFGysYHnoTIhl3Ew5mMbOC6EMl6jdnRlfMXjUN29yvtRPKq5OdOaVtnoxFJR5xNLe-RXujLVWl5_fHIqGkXO1bqCxiqsixCxBA5nPVqst_BCWbgSQTrOo0SmjVOzipyLteaUhpPyw_P5b7P0B9YsbU5_B7ZrsMhuqt7dhRVXtGCjKh85b8HmbVOtbQ8GD4NhjwtmiCHu6404ZmzJMS9wOcwcse2IrM4oL-u7Y19oiSiWh3ZG2FvBUJUSq2IfXvu9l9s7XpdJ4DaK9YwnXps0CL0VqUyMUKGVqTBGep8KJ6SNfW6VUS7XMo6Uj-Q4CPPc47mSSiZRdABrxaRwR8AS7yKd54k02Ighp6FHhZh6h7gnsV614bKRUvZRZcPIlnmPSaQZijQjkWbzNpw0cszqiTHNFt3YhvPFXRQVuSlM4Sbf0wx_Q0rUe38_oXRIkfDYxmHVPcuPiTWCDqGP_333CWw1-RoDcQprs69vd4bYYjbulCOoA-s3_W53iMdub_j0_AOUbs64 |
| link.rule.ids | 315,786,790,12083,21416,27955,27956,31752,31753,33777,33778,43343,43838,74100,74657 |
| linkProvider | ProQuest |
| linkToHtml | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1LT9wwEB4BVUUvqKXQLtCuD5yQLOJkYicnVCHQUhZOIO3N8jq21EOz230c9t8zk8eiHuAYJXKSGXvms-ebGYDznFCy80mUqXapxDyZyqlPglRKu2jIOoYmv-LhUY-e8fckn3TcnGVHq-xtYmOoq5nnM_JL07pqg1fzf5KbRnFwteugsQsfMMuQp7mZbPdbBC6axpUE0mkdFVj2Qc02cy43RnIZTq4PLzf_u6U3sGbjc24_w0EHFsWvVrtfYCfUh_CxbR-5OYT9675b21e4G9893kglHDPEY3cQJ5xvOOY1bYdFYLYdk9UF12X9G8SCPBHn8vDJiPhTCzKlzKo4gufbm6frkezaJEif5WYli2hcmaTRqxILp3TqsVTOYYylCgp9HiuvnQ6VwTzTMcNpklZVpGuNGossO4a9elaH7yCKGDJTVQU6GsRx0DCSQSxjINxT-KgHcNFLyc7bahj2te4xi9SSSC2L1G4GcNrL0XYLY2m3ahzAcHuXRMVhCleH2Xpp6TcQye69_YQ2KWfC0xjfWvW8fkxuCHQoc_Luu4ewP3p6GFvSzP0pfOprNybqDPZWi3X4QThjNf3ZzKYXeMDOjw |
| linkToPdf | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1Lb9swDCbWFm13Gba03bJuiw47DRBq2XrYp2HrErR7BEGxAr0JiiwBPcxpm_SQfz_SlhPs0B0NG7JNSuQn8SMJ8FEhSnY-izzXLudSZXM-91ngQmgXDVrH0OZX_Jrqi2v5_UbdpJJCy0Sr7G1ia6jrhacz8jPTuWojz2JiRcy-TT7f3XNqIEWB1tRNYwf2jNQK92F7X8fT2dXGLJdF28YSITuuqlJWfYizy6NTxnAqyknV4vn6Xyf1BPJsPdDkJbxI0JF96XT9Cp6FZgD7XTPJ9QAOz_vebUdw-fNyOuaCOeKLx3Qsx5xvGecNbo5ZIO4dUdcZVWn9E9gD-iXK7KFzEnbbMDSsxLE4huvJ-Pf5BU9NE7gvlFnxMhpXZXn0opKlEzr3shLOyRgrEYT0KtZeOx1qI1WhYyHnWV7XEa-11LIsihPYbRZNeAOsjKEwdV1Kh4M4CiFGNI9VDIiCSh_1ED71UrJ3XW0Mu62CTCK1KFJLIrXrIZz2crRpmSztRqlDGG3uoqgoaOGasHhcWvwNKdEKPv2ENjnlxeMYrzv1bD9GGYQgwrz977tHcIBTyaJifpzC876QYybewe7q4TG8R9Cxmn9I0-kvynbUMg |
| openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=LINE-1+amplification+accompanies+explosive+genome+repatterning+in+rodents&rft.jtitle=Chromosome+research&rft.au=Dobigny%2C+Gauthier&rft.au=Ozouf-Costaz%2C+Catherine&rft.au=Waters%2C+Paul+D.&rft.au=Bonillo%2C+C%C3%A9line&rft.date=2004-12-01&rft.issn=0967-3849&rft.eissn=1573-6849&rft.volume=12&rft.issue=8&rft.spage=787&rft.epage=793&rft_id=info:doi/10.1007%2Fs10577-005-5265-y&rft.externalDBID=n%2Fa&rft.externalDocID=10_1007_s10577_005_5265_y |
| thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0967-3849&client=summon |
| thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0967-3849&client=summon |
| thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0967-3849&client=summon |