Plant species as predictors of soil pH: Replacing expert judgement with measurements

Question: The use of expert‐based indicator values to estimate abiotic conditions from vegetation is widespread. However, recent research has shown that expert judgement may contain considerable bias and thereby introduces a large amount of uncertainty. Could expert based indicator values be replace...

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Published inJournal of vegetation science Vol. 16; no. 4; pp. 461 - 470
Main Authors Wamelink, G.W. Wieger, Goedhart, Paul W., Van Dobben, Han F., Berendse, Frank
Format Journal Article
LanguageEnglish
Published Oxford, UK Blackwell Publishing Ltd 01.08.2005
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Abstract Question: The use of expert‐based indicator values to estimate abiotic conditions from vegetation is widespread. However, recent research has shown that expert judgement may contain considerable bias and thereby introduces a large amount of uncertainty. Could expert based indicator values be replaced by indicator values based on field measurements? Location: Europe. Methods: We developed a method to estimate species response based on measured physical data, and a method to predict abiotic conditions from the vegetation composition using these responses. This method was tested for soil pH. Results: We were able to estimate the pH response of 556 species of the Dutch flora. Ca. 20% of the responses were, at least, bimodal and many responses had a very wide range. The simplest method (‘raw mean’) yielded the best prediction of pH; the indicator value of a species is the mean of the soil pH values of the sites where it was observed. A list of all raw‐mean estimates per species is given. The predicted pH of a new site is the mean of the indicator values of the present species. The estimated species responses were validated on independent Dutch and European data sets. Older successional stages seem to be predicted better than younger stages. Conclusions: Our method performed better than the popular Ellenberg indicator system for the Dutch data set, while being just as easy to use, because it only needs a single value per species. We foresee that, when more data become available, our method has the potential to replace the Ellenberg system.
AbstractList Question: The use of expert‐based indicator values to estimate abiotic conditions from vegetation is widespread. However, recent research has shown that expert judgement may contain considerable bias and thereby introduces a large amount of uncertainty. Could expert based indicator values be replaced by indicator values based on field measurements? Location: Europe. Methods: We developed a method to estimate species response based on measured physical data, and a method to predict abiotic conditions from the vegetation composition using these responses. This method was tested for soil pH. Results: We were able to estimate the pH response of 556 species of the Dutch flora. Ca. 20% of the responses were, at least, bimodal and many responses had a very wide range. The simplest method (‘raw mean’) yielded the best prediction of pH; the indicator value of a species is the mean of the soil pH values of the sites where it was observed. A list of all raw‐mean estimates per species is given. The predicted pH of a new site is the mean of the indicator values of the present species. The estimated species responses were validated on independent Dutch and European data sets. Older successional stages seem to be predicted better than younger stages. Conclusions: Our method performed better than the popular Ellenberg indicator system for the Dutch data set, while being just as easy to use, because it only needs a single value per species. We foresee that, when more data become available, our method has the potential to replace the Ellenberg system.
Abstract Question: The use of expert‐based indicator values to estimate abiotic conditions from vegetation is widespread. However, recent research has shown that expert judgement may contain considerable bias and thereby introduces a large amount of uncertainty. Could expert based indicator values be replaced by indicator values based on field measurements? Location: Europe. Methods: We developed a method to estimate species response based on measured physical data, and a method to predict abiotic conditions from the vegetation composition using these responses. This method was tested for soil pH. Results: We were able to estimate the pH response of 556 species of the Dutch flora. Ca. 20% of the responses were, at least, bimodal and many responses had a very wide range. The simplest method (‘raw mean’) yielded the best prediction of pH; the indicator value of a species is the mean of the soil pH values of the sites where it was observed. A list of all raw‐mean estimates per species is given. The predicted pH of a new site is the mean of the indicator values of the present species. The estimated species responses were validated on independent Dutch and European data sets. Older successional stages seem to be predicted better than younger stages. Conclusions: Our method performed better than the popular Ellenberg indicator system for the Dutch data set, while being just as easy to use, because it only needs a single value per species. We foresee that, when more data become available, our method has the potential to replace the Ellenberg system.
Author Van Dobben, Han F.
Goedhart, Paul W.
Wamelink, G.W. Wieger
Berendse, Frank
Author_xml – sequence: 1
  givenname: G.W. Wieger
  surname: Wamelink
  fullname: Wamelink, G.W. Wieger
  email: wieger.wamelink@wur.nl
  organization: Department of Landscape Ecology, Alterra, Droevendaalsesteeg 3a, P.O. Box 47, 6700 AA Wageningen, The Netherlands
– sequence: 2
  givenname: Paul W.
  surname: Goedhart
  fullname: Goedhart, Paul W.
  organization: Biometris, Wageningen UR, P.O. Box 100, 6700 AC Wageningen, The Netherlands
– sequence: 3
  givenname: Han F.
  surname: Van Dobben
  fullname: Van Dobben, Han F.
  organization: Department of Landscape Ecology, Alterra, Droevendaalsesteeg 3a, P.O. Box 47, 6700 AA Wageningen, The Netherlands
– sequence: 4
  givenname: Frank
  surname: Berendse
  fullname: Berendse, Frank
  organization: Nature Conservation & Plant Ecology Group, Wageningen University, Bornesteeg 69, NL-6708 PD Wageningen, The Netherlands
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1991; 18
1998; 29
2001; 93
2004; 27
2002; 13
2003; 14
1997
1995
2003; 38
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2005
1993
1995; 18
1998; 135
1998; 86
2003; 30
1992; 73
1977
1999; 109
1989; 30
1987; 69
2001; 112
2001; 294
2001
1990
2000
2000; 11
2004; 15
1967; 4
1994; 78
2003; 4
1999; 31
2003; 29
2001; 38
2004; 119
2003; 84
1998; 102
1994; 5
1979; 9
1967
1988
2003; 67
Kruijne A.A. (e_1_2_1_25_1) 1967
e_1_2_1_20_1
e_1_2_1_41_1
Ellenberg H. (e_1_2_1_12_1) 1979; 9
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Hastie T.J. (e_1_2_1_22_1) 1990
Payne R.W. (e_1_2_1_32_1) 2000
Hinsberg A. (e_1_2_1_42_1) 2001
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e_1_2_1_4_1
e_1_2_1_10_1
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Dobben H.F. (e_1_2_1_40_1) 1997
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Snippet Question: The use of expert‐based indicator values to estimate abiotic conditions from vegetation is widespread. However, recent research has shown that expert...
Abstract Question: The use of expert‐based indicator values to estimate abiotic conditions from vegetation is widespread. However, recent research has shown...
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istex
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StartPage 461
SubjectTerms Ellenberg indicator values
Optimum curve
Plant species response
Prediction method
Spline
Title Plant species as predictors of soil pH: Replacing expert judgement with measurements
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