Changes in microbial community composition, activity, and greenhouse gas production upon inundation of drained iron-rich peat soils

Globally, large-scale land drainage has severely deteriorated the functioning and services of peatlands, making restoration plans of the utmost importance. Rewetting is essential for the restoration of drained peatlands, but the level of success including greenhouse gas (GHG) mitigation largely depe...

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Published inSoil biology & biochemistry Vol. 149; p. 107862
Main Authors de Jong, Anniek E.E., Guererro-Cruz, Simon, van Diggelen, Josepha M.H., Vaksmaa, Annika, Lamers, Leon P.M., Jetten, Mike S.M., Smolders, Alfons J.P., Rasigraf, Olivia
Format Journal Article
LanguageEnglish
Published Elsevier Ltd 01.10.2020
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Abstract Globally, large-scale land drainage has severely deteriorated the functioning and services of peatlands, making restoration plans of the utmost importance. Rewetting is essential for the restoration of drained peatlands, but the level of success including greenhouse gas (GHG) mitigation largely depends on the soil microbiome interactions under the prevailing biogeochemical conditions. Here, we investigated the effects of inundation of drained iron (Fe) -rich peat topsoils on nutrient release, surface water quality, GHG production and consumption, and on the composition and activity of the microbial community. The effect of the addition of different potential electron acceptors on methane (CH4) production and consumption were studied in incubation experiments. In response to inundation, porewater concentrations of Fe, total inorganic carbon, ammonium, and phosphorus increased. CH4 emissions increased in the control (i.e. without any additions) and Fe(III) oxide amended incubations upon inundation. This could be explained by the increase in the relative abundance of methanogens even though Fe(III) was previously hypothesized to lower methanogenic activity. In contrast, nitrite, nitrate, and sulfate-rich incubations inhibited methanogenesis. The prolonged exposure to nitrogen oxides stimulated denitrification with nitrous oxide (N2O) as the main gaseous product, together with an increase in the relative abundance of denitrifying microorganisms. Our results demonstrate that insights into the changes in microbial communities in relation to soil geochemistry explain differences in responses observed in different peat soils observed upon inundation. The increase in emissions of the potent GHGs CH4 and N2O from Fe-rich peat topsoils are a major adverse effect in the early stage of inundation. [Display omitted] •Insights into the changes in microbial communities in relation to soil geochemistry.•High iron oxide availability does not inhibit methanogenesis.•Methanogenic community abundance increases as N oxides and SO42− become depleted.•Inundation with N-rich water stimulates denitrification and may lead to production of N2O.•Additional strategies are needed for inundation of iron-rich peat soils.
AbstractList Globally, large-scale land drainage has severely deteriorated the functioning and services of peatlands, making restoration plans of the utmost importance. Rewetting is essential for the restoration of drained peatlands, but the level of success including greenhouse gas (GHG) mitigation largely depends on the soil microbiome interactions under the prevailing biogeochemical conditions. Here, we investigated the effects of inundation of drained iron (Fe) -rich peat topsoils on nutrient release, surface water quality, GHG production and consumption, and on the composition and activity of the microbial community. The effect of the addition of different potential electron acceptors on methane (CH4) production and consumption were studied in incubation experiments. In response to inundation, porewater concentrations of Fe, total inorganic carbon, ammonium, and phosphorus increased. CH4 emissions increased in the control (i.e. without any additions) and Fe(III) oxide amended incubations upon inundation. This could be explained by the increase in the relative abundance of methanogens even though Fe(III) was previously hypothesized to lower methanogenic activity. In contrast, nitrite, nitrate, and sulfate-rich incubations inhibited methanogenesis. The prolonged exposure to nitrogen oxides stimulated denitrification with nitrous oxide (N2O) as the main gaseous product, together with an increase in the relative abundance of denitrifying microorganisms. Our results demonstrate that insights into the changes in microbial communities in relation to soil geochemistry explain differences in responses observed in different peat soils observed upon inundation. The increase in emissions of the potent GHGs CH4 and N2O from Fe-rich peat topsoils are a major adverse effect in the early stage of inundation. [Display omitted] •Insights into the changes in microbial communities in relation to soil geochemistry.•High iron oxide availability does not inhibit methanogenesis.•Methanogenic community abundance increases as N oxides and SO42− become depleted.•Inundation with N-rich water stimulates denitrification and may lead to production of N2O.•Additional strategies are needed for inundation of iron-rich peat soils.
ArticleNumber 107862
Author van Diggelen, Josepha M.H.
Vaksmaa, Annika
de Jong, Anniek E.E.
Rasigraf, Olivia
Jetten, Mike S.M.
Smolders, Alfons J.P.
Lamers, Leon P.M.
Guererro-Cruz, Simon
Author_xml – sequence: 1
  givenname: Anniek E.E.
  surname: de Jong
  fullname: de Jong, Anniek E.E.
  email: dejonganniek@gmail.com
  organization: Department of Microbiology, Institute for Water and Wetland Research, Radboud University, Heyendaalseweg 135, 6525, AJ, Nijmegen, the Netherlands
– sequence: 2
  givenname: Simon
  surname: Guererro-Cruz
  fullname: Guererro-Cruz, Simon
  organization: Department of Microbiology, Institute for Water and Wetland Research, Radboud University, Heyendaalseweg 135, 6525, AJ, Nijmegen, the Netherlands
– sequence: 3
  givenname: Josepha M.H.
  surname: van Diggelen
  fullname: van Diggelen, Josepha M.H.
  organization: Research Centre B-WARE, Toernooiveld 1, 6525, ED, Nijmegen, the Netherlands
– sequence: 4
  givenname: Annika
  surname: Vaksmaa
  fullname: Vaksmaa, Annika
  organization: Department of Microbiology, Institute for Water and Wetland Research, Radboud University, Heyendaalseweg 135, 6525, AJ, Nijmegen, the Netherlands
– sequence: 5
  givenname: Leon P.M.
  surname: Lamers
  fullname: Lamers, Leon P.M.
  organization: Department of Aquatic Ecology and Environmental Biology Institute for Water and Wetland Research, Radboud University, Heyendaalseweg 135, 6525, AJ, Nijmegen, the Netherlands
– sequence: 6
  givenname: Mike S.M.
  surname: Jetten
  fullname: Jetten, Mike S.M.
  organization: Department of Microbiology, Institute for Water and Wetland Research, Radboud University, Heyendaalseweg 135, 6525, AJ, Nijmegen, the Netherlands
– sequence: 7
  givenname: Alfons J.P.
  surname: Smolders
  fullname: Smolders, Alfons J.P.
  organization: Research Centre B-WARE, Toernooiveld 1, 6525, ED, Nijmegen, the Netherlands
– sequence: 8
  givenname: Olivia
  surname: Rasigraf
  fullname: Rasigraf, Olivia
  organization: Department of Microbiology, Institute for Water and Wetland Research, Radboud University, Heyendaalseweg 135, 6525, AJ, Nijmegen, the Netherlands
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Keywords Methane
Microbial diversity
Restoration of drained peatlands
Greenhouse gas emissions
Nitrogen
Methanogenesis
Language English
License This is an open access article under the CC BY license.
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Snippet Globally, large-scale land drainage has severely deteriorated the functioning and services of peatlands, making restoration plans of the utmost importance....
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StartPage 107862
SubjectTerms Greenhouse gas emissions
Methane
Methanogenesis
Microbial diversity
Nitrogen
Restoration of drained peatlands
Title Changes in microbial community composition, activity, and greenhouse gas production upon inundation of drained iron-rich peat soils
URI https://dx.doi.org/10.1016/j.soilbio.2020.107862
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