Development of a novel noninvasive quantitative method to monitor Siraitia grosvenorii cell growth and browning degree using an integrated computer‐aided vision technology and machine learning
The rapid, accurate and noninvasive detection of biomass and plant cell browning can provide timely feedback on cell growth in plant cell culture. In this study, Siraitia grosvenorii suspension cells were taken as an example, a phenotype analysis platform was successfully developed to predict the bi...
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Published in | Biotechnology and bioengineering Vol. 118; no. 10; pp. 4092 - 4104 |
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Main Authors | , , , , , , , , , |
Format | Journal Article |
Language | English |
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United States
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01.10.2021
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Online Access | Get full text |
ISSN | 0006-3592 1097-0290 1097-0290 |
DOI | 10.1002/bit.27886 |
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Abstract | The rapid, accurate and noninvasive detection of biomass and plant cell browning can provide timely feedback on cell growth in plant cell culture. In this study, Siraitia grosvenorii suspension cells were taken as an example, a phenotype analysis platform was successfully developed to predict the biomass and the degree of cell browning based on the color changes of cells in computer‐aided vision technology. First, a self‐made laboratory system was established to obtain images. Then, matrices were prepared from digital images by a self‐developed high‐throughput image processing tool. Finally, classification models were used to judge different cell types, and then a semi‐supervised classification to predict different degrees of cell browning. Meanwhile, regression models were developed to predict the plant cell mass. All models were verified with a good agreement by biological experiments. Therefore, this method can be applied for low‐cost biomass estimation and browning degree quantification in plant cell culture.
In this work, a simple and non‐invasive detection method for measuring biomass of plant cell was developed. It is a self‐made laboratory system for high throughput image analysis using an integrated computer‐aided vision technology and machine learning for quantitative analysis of biomass growth and browning degree in plant cell culture. |
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AbstractList | The rapid, accurate and noninvasive detection of biomass and plant cell browning can provide timely feedback on cell growth in plant cell culture. In this study, Siraitia grosvenorii suspension cells were taken as an example, a phenotype analysis platform was successfully developed to predict the biomass and the degree of cell browning based on the color changes of cells in computer‐aided vision technology. First, a self‐made laboratory system was established to obtain images. Then, matrices were prepared from digital images by a self‐developed high‐throughput image processing tool. Finally, classification models were used to judge different cell types, and then a semi‐supervised classification to predict different degrees of cell browning. Meanwhile, regression models were developed to predict the plant cell mass. All models were verified with a good agreement by biological experiments. Therefore, this method can be applied for low‐cost biomass estimation and browning degree quantification in plant cell culture. The rapid, accurate and noninvasive detection of biomass and plant cell browning can provide timely feedback on cell growth in plant cell culture. In this study, Siraitia grosvenorii suspension cells were taken as an example, a phenotype analysis platform was successfully developed to predict the biomass and the degree of cell browning based on the color changes of cells in computer‐aided vision technology. First, a self‐made laboratory system was established to obtain images. Then, matrices were prepared from digital images by a self‐developed high‐throughput image processing tool. Finally, classification models were used to judge different cell types, and then a semi‐supervised classification to predict different degrees of cell browning. Meanwhile, regression models were developed to predict the plant cell mass. All models were verified with a good agreement by biological experiments. Therefore, this method can be applied for low‐cost biomass estimation and browning degree quantification in plant cell culture. The rapid, accurate and noninvasive detection of biomass and plant cell browning can provide timely feedback on cell growth in plant cell culture. In this study, Siraitia grosvenorii suspension cells were taken as an example, a phenotype analysis platform was successfully developed to predict the biomass and the degree of cell browning based on the color changes of cells in computer-aided vision technology. First, a self-made laboratory system was established to obtain images. Then, matrices were prepared from digital images by a self-developed high-throughput image processing tool. Finally, classification models were used to judge different cell types, and then a semi-supervised classification to predict different degrees of cell browning. Meanwhile, regression models were developed to predict the plant cell mass. All models were verified with a good agreement by biological experiments. Therefore, this method can be applied for low-cost biomass estimation and browning degree quantification in plant cell culture.The rapid, accurate and noninvasive detection of biomass and plant cell browning can provide timely feedback on cell growth in plant cell culture. In this study, Siraitia grosvenorii suspension cells were taken as an example, a phenotype analysis platform was successfully developed to predict the biomass and the degree of cell browning based on the color changes of cells in computer-aided vision technology. First, a self-made laboratory system was established to obtain images. Then, matrices were prepared from digital images by a self-developed high-throughput image processing tool. Finally, classification models were used to judge different cell types, and then a semi-supervised classification to predict different degrees of cell browning. Meanwhile, regression models were developed to predict the plant cell mass. All models were verified with a good agreement by biological experiments. Therefore, this method can be applied for low-cost biomass estimation and browning degree quantification in plant cell culture. The rapid, accurate and noninvasive detection of biomass and plant cell browning can provide timely feedback on cell growth in plant cell culture. In this study, Siraitia grosvenorii suspension cells were taken as an example, a phenotype analysis platform was successfully developed to predict the biomass and the degree of cell browning based on the color changes of cells in computer‐aided vision technology. First, a self‐made laboratory system was established to obtain images. Then, matrices were prepared from digital images by a self‐developed high‐throughput image processing tool. Finally, classification models were used to judge different cell types, and then a semi‐supervised classification to predict different degrees of cell browning. Meanwhile, regression models were developed to predict the plant cell mass. All models were verified with a good agreement by biological experiments. Therefore, this method can be applied for low‐cost biomass estimation and browning degree quantification in plant cell culture. In this work, a simple and non‐invasive detection method for measuring biomass of plant cell was developed. It is a self‐made laboratory system for high throughput image analysis using an integrated computer‐aided vision technology and machine learning for quantitative analysis of biomass growth and browning degree in plant cell culture. |
Author | Wang, Zejian Chu, Ju Zhuang, Yingping Zhu, Xiaofeng Tian, Xiwei Yu, Zhihong Guo, Meijin Zaman, Waqas Qamar Liu, Zebo Mohsin, Ali |
Author_xml | – sequence: 1 givenname: Xiaofeng surname: Zhu fullname: Zhu, Xiaofeng organization: East China University of Science and Technology – sequence: 2 givenname: Ali surname: Mohsin fullname: Mohsin, Ali organization: East China University of Science and Technology – sequence: 3 givenname: Waqas Qamar surname: Zaman fullname: Zaman, Waqas Qamar organization: National University of Sciences and Technology (NUST) – sequence: 4 givenname: Zebo surname: Liu fullname: Liu, Zebo organization: East China University of Science and Technology – sequence: 5 givenname: Zejian surname: Wang fullname: Wang, Zejian organization: East China University of Science and Technology – sequence: 6 givenname: Zhihong surname: Yu fullname: Yu, Zhihong email: yzhong@ecust.edu.cn organization: East China University of Science and Technology – sequence: 7 givenname: Xiwei surname: Tian fullname: Tian, Xiwei organization: East China University of Science and Technology – sequence: 8 givenname: Yingping surname: Zhuang fullname: Zhuang, Yingping organization: East China University of Science and Technology – sequence: 9 givenname: Meijin orcidid: 0000-0002-3171-4802 surname: Guo fullname: Guo, Meijin email: guo_mj@ecust.edu.cn organization: East China University of Science and Technology – sequence: 10 givenname: Ju orcidid: 0000-0002-6406-1748 surname: Chu fullname: Chu, Ju email: juchu@ecust.edu.cn organization: East China University of Science and Technology |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/34255354$$D View this record in MEDLINE/PubMed |
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Snippet | The rapid, accurate and noninvasive detection of biomass and plant cell browning can provide timely feedback on cell growth in plant cell culture. In this... |
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SubjectTerms | Biomass Browning browning degree Cell culture Cell Culture Techniques Cell growth computer‐aided vision technology Cucurbitaceae - cytology Cucurbitaceae - metabolism Digital imaging Image classification Image processing Image Processing, Computer-Assisted Learning algorithms Machine Learning Monitoring methods noninvasive quantitative method Phenotypes Plant Cells - metabolism Regression analysis Regression models Siraitia grosvenorii |
Title | Development of a novel noninvasive quantitative method to monitor Siraitia grosvenorii cell growth and browning degree using an integrated computer‐aided vision technology and machine learning |
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